| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
|---|---|---|---|---|---|---|---|---|---|---|
| 145859 | hypothetical | BPSL1091 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc0995 or rs04297 SWALL:Q8Y0P8 (EMBL:AL646062) (295 aa) fasta scores: E(): 7e-62, 58.36% id in 305 aa, and to Neisseria meningitidis putative transferase nma1087 or nmb0869 SWALL:Q9JQL8 (EMBL:AL162755) (263 aa) fasta scores: E(): 1.4e-21, 31.83% id in 245 aa | genbank | 52209140 | CAH35084.1 | 309 | 1261467 | 1262396 | |
| 145860 | hypothetical | BPSL1092 | putative membrane protein Similar to Thermoplasma volcanium hypothetical protein tv1324 or tvg1365320 SWALL:Q978U1 (EMBL:AP000996) (66 aa) fasta scores: E(): 3.5e-06, 46.15% id in 52 aa, and to Thermoplasma acidophilum hypothetical membrane protein ta0299 SWALL:Q9HLC9 (EMBL:AL445063) (86 aa) fasta scores: E(): 6.1e-06, 44.23% id in 52 aa | genbank | 52209141 | CAH35085.1 | 79 | 1262588 | 1262827 | |
| 145861 | hypothetical | BPSL1093 | putative membrane protein Similar to Streptomyces coelicolor putative permease sco5229 or Sc7E4.26c SWALL:Q9K494 (EMBL:AL359214) (532 aa) fasta scores: E(): 5.9e-102, 58.25% id in 527 aa, and to Sulfolobus solfataricus metabolite permease, putative sso2476 SWALL:Q97VX6 (EMBL:AE006846) (505 aa) fasta scores: E(): 1.9e-75, 45.11% id in 501 aa | genbank | 52209142 | CAH35086.1 | 516 | 1262824 | 1264374 | |
| 145862 | hypothetical | BPSL1094 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsp0601 or rs03878 SWALL:Q8XS80 (EMBL:AL646079) (143 aa) fasta scores: E(): 2e-23, 52.38% id in 147 aa, and to Escherichia coli PhnB protein b4107 SWALL:PHNB_ECOLI (SWALL:P16681) (147 aa) fasta scores: E(): 6e-15, 39.16% id in 143 aa | genbank | 52209143 | CAH35087.1 | 144 | 1264502 | 1264936 | |
| 145863 | talB | hypothetical | BPSL1095 | transaldolase B Similar to Escherichia coli, and Escherichia coli O157:H7 transaldolase B TalB or b0008 or z0008 or ecs0008 SWALL:TALB_ECOLI (SWALL:P30148) (316 aa) fasta scores: E(): 5.3e-60, 56.91% id in 318 aa, and to Ralstonia solanacearum transaldolase rsc1231 or rs02738 SWALL:TAL_RALSO (SWALL:Q8Y014) (319 aa) fasta scores: E(): 2.5e-83, 72.69% id in 315 aa | genbank | 52209144 | CAH35088.1 | 317 | 1265301 | 1266254 |
| 145864 | hypothetical | BPSL1096 | putative transport related membrane protein Similar to, although longer in its N-terminal region than, Acinetobacter calcoaceticus benzoate membrane transport protein BenE SWALL:BENE_ACICA (SWALL:P07775) (394 aa) fasta scores: E(): 9.6e-57, 43.38% id in 378 aa, and to Pseudomonas putida BenE SWALL:Q9L7Y0 (EMBL:AF218267) (399 aa) fasta scores: E(): 6.5e-66, 48.83% id in 385 aa | genbank | 52209145 | CAH35089.1 | 405 | 1266656 | 1267873 | |
| 145865 | hypothetical | BPSL1097 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc0996 or rs04296 SWALL:Q8Y0P7 (EMBL:AL646062) (391 aa) fasta scores: E(): 1.1e-126, 78.57% id in 392 aa, and to Pseudomonas aeruginosa hypothetical protein pa2705 SWALL:Q9I0D7 (EMBL:AE004698) (393 aa) fasta scores: E(): 8.7e-96, 59.03% id in 393 aa | genbank | 52209146 | CAH35090.1 | 391 | 1267966 | 1269141 | |
| 145866 | hypothetical | BPSL1098 | conserved hypothetical protein Similar to, although shorter in its N-terminal region than, Ralstonia solanacearum hypothetical protein rsc0998 or rs04294 SWALL:Q8Y0P5 (EMBL:AL646062) (290 aa) fasta scores: E(): 5.8e-87, 84.94% id in 279 aa, and to Pseudomonas aeruginosa hypothetical protein pa2707 SWALL:Q9I0D5 (EMBL:AE004698) (281 aa) fasta scores: E(): 3.6e-73, 71.84% id in 277 aa | genbank | 52209147 | CAH35091.1 | 280 | 1269354 | 1270196 | |
| 145867 | hypothetical | BPSL1099 | putative cytochrome C precursor-related protein Similar to Ralstonia solanacearum putative periplasmic cytochrome type-C oxidoreductase signal peptide protein rsc0999 or rs04293 SWALL:Q8Y0P4 (EMBL:AL646062) (115 aa) fasta scores: E(): 1.5e-21, 58.77% id in 114 aa, and to Marinobacter hydrocarbonoclasticus cytochrome C-552 SWALL:C552_MARHY (SWALL:P82903) (88 aa) fasta scores: E(): 2.1e-06, 41.11% id in 90 aa | genbank | 52209148 | CAH35092.1 | 119 | 1270430 | 1270789 | |
| 145868 | hypothetical | BPSL1100 | putative cytochrome C precursor-related protein Similar to Ralstonia solanacearum putative periplasmic cytochrome type-C oxidoreductase signal peptide protein rsc1000 or rs04292 SWALL:Q8Y0P3 (EMBL:AL646062) (133 aa) fasta scores: E(): 2.3e-12, 49.58% id in 121 aa, and to Marinobacter hydrocarbonoclasticus cytochrome C-552 SWALL:C552_MARHY (SWALL:P82903) (88 aa) fasta scores: E(): 3.7e-05, 38.63% id in 88 aa | genbank | 52209149 | CAH35093.1 | 122 | 1270830 | 1271198 | |
| 145869 | hypothetical | BPSL1101 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc1001 or rs04291 SWALL:Q8Y0P2 (EMBL:AL646062) (170 aa) fasta scores: E(): 1.1e-36, 63.12% id in 141 aa, and to Neisseria meningitidis hypothetical protein nma1720 SWALL:Q9JTL8 (EMBL:AL162756) (156 aa) fasta scores: E(): 2.9e-18, 43.57% id in 140 aa. Note: Similarity in both cases starts in residue no. 40 | genbank | 52209150 | CAH35094.1 | 183 | 1271697 | 1272248 | |
| 145870 | hypothetical | BPSL1102 | putative membrane protein Similar to Ralstonia solanacearum probable transmembrane protein rsc1002 or rs04290 SWALL:Q8Y0P1 (EMBL:AL646062) (312 aa) fasta scores: E(): 8.7e-50, 57.6% id in 309 aa, and to Aeropyrum pernix hypothetical protein ape0076 SWALL:Q9YG25 (EMBL:AP000058) (296 aa) fasta scores: E(): 8.3e-14, 34.23% id in 295 aa | genbank | 52209151 | CAH35095.1 | 356 | 1272686 | 1273756 | |
| 145871 | nth | hypothetical | BPSL1103 | endonuclease III Similar to Escherichia coli endonuclease III Nth or b1633 SWALL:END3_ECOLI (SWALL:P20625) (211 aa) fasta scores: E(): 7.6e-52, 68.26% id in 208 aa, and to Ralstonia solanacearum probable endonuclease III protein rsc1005 or rs04287 SWALL:Q8Y0N8 (EMBL:AL646062) (214 aa) fasta scores: E(): 1.9e-64, 78.77% id in 212 aa | genbank | 52209152 | CAH35096.1 | 214 | 1273889 | 1274533 |
| 145872 | hypothetical | BPSL1104 | putative electron transport-related protein Similar to Ralstonia solanacearum probable ferredoxin rsc1006 or rs04286 SWALL:Q8Y0N7 (EMBL:AL646062) (268 aa) fasta scores: E(): 1.3e-49, 60.67% id in 267 aa, and to Escherichia coli electron transport complex protein RnfB or b1628 (although shorter in its N-terminal region; similarity does not span to the C-terminal region of BPSL1104) SWALL:RNFB_ECOLI (SWALL:P77223) (192 aa) fasta scores: E(): 1.2e-20, 50.7% id in 142 aa | genbank | 52209153 | CAH35097.1 | 290 | 1274538 | 1275410 | |
| 145873 | hypothetical | BPSL1105 | putative TetR family regulatory protein Similar to Ralstonia solanacearum probable transcription regulator protein rsc1007 or rs04285 SWALL:Q8Y0N6 (EMBL:AL646062) (239 aa) fasta scores: E(): 1.6e-45, 54.9% id in 204 aa, and to Agrobacterium tumefaciens transcriptional regulator, TetR family atu3115 or agr_l_1690gM SWALL:Q8UBA1 (EMBL:AE009242) (232 aa) fasta scores: E(): 8.1e-30, 48.12% id in 187 aa | genbank | 52209154 | CAH35098.1 | 210 | 1275668 | 1276300 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 145874 | hypothetical | BPSL1106 | putative depolymerase/histone-like protein N-terminal region similar to Alcaligenes eutrophus intracellular PHB depolymerase PhaZRE SWALL:O87189 (EMBL:AB017612) (419 aa) fasta scores: E(): 3.9e-118, 77.91% id in 412 aa, and to Ralstonia solanacearum probable poly[D(-)-3-hydroxybutyrate] depolymerase protein PhaZ or rsc1008 or rs04284 SWALL:Q8Y0N5 (EMBL:AL646062) (422 aa) fasta scores: E(): 3.7e-119, 76.73% id in 417 aa, and C-terminal region similar to Trypanosoma cruzi histone h1.c8/h1.m1 SWALL:H1C8_TRYCR (SWALL:P40270) (74 aa) fasta scores: E(): 2.8, 44.06% id in 59 aa | genbank | 52209155 | CAH35099.1 | 488 | 1276435 | 1277901 | |
| 145875 | hypothetical | BPSL1107 | conserved hypothetical protein Similar to Streptomyces coelicolor hypothetical protein sco1830 or sci8.15 SWALL:Q9RJ38 (EMBL:AL132644) (595 aa) fasta scores: E(): 6e-137, 57.52% id in 598 aa, and to Ralstonia solanacearum hypothetical protein rsc1458 or rs03849 SWALL:Q8XZE3 (EMBL:AL646064) (619 aa) fasta scores: E(): 1.4e-118, 62% id in 608 aa | genbank | 52209156 | CAH35100.1 | 610 | 1278121 | 1279953 | |
| 145876 | hypothetical | BPSL1108 | putative exported protein Similar to Pseudomonas aeruginosa hypothetical protein pa4204 SWALL:Q9HWH7 (EMBL:AE004837) (388 aa) fasta scores: E(): 1.8e-55, 46.01% id in 389 aa, and to Ralstonia solanacearum putative hemagglutinin-related protein rsp0183 or rs04695 SWALL:Q8XTD0 (EMBL:AL646077) (410 aa) fasta scores: E(): 1.2e-33, 35.28% id in 411 aa | genbank | 52209157 | CAH35101.1 | 411 | 1280130 | 1281365 | |
| 145877 | hypothetical | BPSL1109 | putative membrane protein C-terminal region similar to Escherichia coli cell division protein FtsK or b0890 SWALL:FTSK_ECOLI (SWALL:P46889) (1329 aa) fasta scores: E(): 3.4e-64, 39.91% id in 1125 aa, and N-terminal region to Streptococcus pneumoniae cell wall surface anchor family protein sp1772 SWALL:Q97P71 (EMBL:AE007470) (4776 aa) fasta scores: E(): 3.1e-25, 26.32% id in 1189 aa. Note: Also contains a repeat region (7x TSAET(A/V)AP(D/N)(D/G/S)H(A/V)(P/S)) | genbank | 52209158 | CAH35102.1 | 1841 | 1281716 | 1287241 | |
| 145878 | hypothetical | BPSL1110 | putative lipoprotein Similar to Ralstonia solanacearum probable transmembrane protein rsc0694 or rs01599 SWALL:Q8Y1J6 (EMBL:AL646060) (246 aa) fasta scores: E(): 1.6e-07, 32.12% id in 165 aa, and to Deinococcus radiodurans hypothetical protein dr1940 SWALL:Q9RT29 (EMBL:AE002033) (403 aa) fasta scores: E(): 1.7e-05, 33.55% id in 152 aa | genbank | 52209159 | CAH35103.1 | 173 | 1287413 | 1287934 | |
| 145879 | purT | hypothetical | BPSL1111 | phosphoribosylglycinamide formyltransferase 2 Similar to Escherichia coli phosphoribosylglycinamide formyltransferase 2 PurT or b1849 SWALL:PURT_ECOLI (SWALL:P33221) (391 aa) fasta scores: E(): 1.5e-82, 63.13% id in 396 aa, and to Corynebacterium glutamicum ATCC 13032 formate-dependent phosphoribosylglycinamide formyltransferase cgl2759 SWALL:BAC00153 (EMBL:AP005282) (398 aa) fasta scores: E(): 3.9e-93, 65.29% id in 389 aa | genbank | 52209160 | CAH35104.1 | 404 | 1288695 | 1289909 |
| 145880 | hypothetical | BPSL1112 | putative lipoprotein Similar to Ralstonia solanacearum probable lipoprotein rsp0401 or rs00829 SWALL:Q8XSR6 (EMBL:AL646078) (55 aa) fasta scores: E(): 7.9e-11, 75.51% id in 49 aa | genbank | 52209161 | CAH35105.1 | 73 | 1290012 | 1290233 | |
| 145881 | hypothetical | BPSL1113 | putative exported protein Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc2496 rsc2496 or rs01100 SWALL:Q8XWH8 (EMBL:AL646070) (151 aa) fasta scores: E(): 2.2e-07, 41.57% id in 89 aa, and to Brucella melitensis hypothetical protein bmei1494 SWALL:Q8YFM6 (EMBL:AE009586) (113 aa) fasta scores: E(): 8.3e-07, 32.75% id in 116 aa | genbank | 52209162 | CAH35106.1 | 128 | 1290292 | 1290678 | |
| 145882 | rhlE2 | hypothetical | BPSL1114 | putative ATP-dependent RNA helicase 2 Similar to Escherichia coli putative ATP-dependent RNA helicase RhlE or b0797 SWALL:RHLE_ECOLI (SWALL:P25888) (454 aa) fasta scores: E(): 3e-74, 52.16% id in 462 aa, and to Ralstonia solanacearum probable ATP-dependent RNA helicase protein rsc2211 or rs01388 SWALL:Q8XXA5 (EMBL:AL646068) (495 aa) fasta scores: E(): 4.1e-102, 65.59% id in 497 aa | genbank | 52209163 | CAH35107.1 | 482 | 1291364 | 1292812 |
| 145883 | hypothetical | BPSL1115 | putative glutamyl tRNA synthetase Similar to Escherichia coli glutamyl-tRNA synthetase GltX or b2400 SWALL:SYE_ECOLI (SWALL:P04805) (471 aa) fasta scores: E(): 1.2e-25, 36.29% id in 248 aa, and to Ralstonia solanacearum putative glutamyl-tRNA synthetase-related protein rsc2210 or rs01389 SWALL:Q8XXA6 (EMBL:AL646068) (315 aa) fasta scores: E(): 2.4e-72, 65.41% id in 292 aa | genbank | 52209164 | CAH35108.1 | 297 | 1293310 | 1294203 | |
| 145884 | hypothetical | BPSL1116 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc2206 or rs01393 SWALL:Q8XXB0 (EMBL:AL646068) (282 aa) fasta scores: E(): 5.6e-65, 63.53% id in 277 aa, and to Rhizobium loti hypothetical protein mll2992 SWALL:YT92_RHILO (SWALL:Q98H78) (309 aa) fasta scores: E(): 8.2e-27, 43.79% id in 274 aa | genbank | 52209165 | CAH35109.1 | 299 | 1294247 | 1295146 | |
| 145885 | dnaE | hypothetical | BPSL1117 | putative DNA polymerase III alpha subunit Similar to Escherichia coli DNA polymerase III alpha subunit DnaE or PolC or b0184 SWALL:DP3A_ECOLI (SWALL:P10443) (1160 aa) fasta scores: E(): 1.2e-188, 49.2% id in 1197 aa, and to Ralstonia solanacearum probable DNA polymerase III rsc2205 or rs01394 SWALL:Q8XXB1 (EMBL:AL646068) (1173 aa) fasta scores: E(): 0, 73.06% id in 1203 aa | genbank | 52209166 | CAH35110.1 | 1174 | 1295759 | 1299283 |
| 145886 | hypothetical | BPSL1118 | putative ABC transport system, ATP-binding protein Similar to Escherichia coli, and Escherichia coli O157:H7 probable transport ATP-binding protein MsbA or b0914 or z1260 or ecs0997 SWALL:MSBA_ECOLI (SWALL:P27299) (582 aa) fasta scores: E(): 4.9e-78, 42.05% id in 573 aa, and to Ralstonia solanacearum probable composite ATP-binding transmembrane ABC transporter protein rsc2200 or rs01399 SWALL:Q8XXB6 (EMBL:AL646068) (592 aa) fasta scores: E(): 1e-124, 65.23% id in 581 aa | genbank | 52209167 | CAH35111.1 | 596 | 1299323 | 1301113 | |
| 145887 | hypothetical | BPSL1119 | putative LPS biosynthesis-related protein Similar to Neisseria meningitidis LgtG SWALL:AAM33532 (EMBL:AF470675) (351 aa) fasta scores: E(): 2.6e-49, 40.57% id in 350 aa, and to Neisseria gonorrhoeae lipooligosaccharide glycosyl transferase G LgtG SWALL:O85795 (EMBL:AF076919) (351 aa) fasta scores: E(): 1.4e-48, 40.28% id in 350 aa | genbank | 52209168 | CAH35112.1 | 360 | 1301167 | 1302249 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 145888 | hypothetical | BPSL1120 | putative transferase (LPS biosynthesis-related) Similar to Streptomyces coelicolor putative transferase sco6183 or sc2g5.04 SWALL:Q9Z5B9 (EMBL:AL035478) (335 aa) fasta scores: E(): 6.7e-12, 31.41% id in 312 aa, and to Pseudomonas aeruginosa heptosyl transferase I RfaC SWALL:O05195 (EMBL:U70982) (355 aa) fasta scores: E(): 2.8e-10, 28.87% id in 374 aa | genbank | 52209169 | CAH35113.1 | 381 | 1302531 | 1303676 | |
| 145889 | hypothetical | BPSL1121 | putative membrane protein Similar to Anabaena sp. hypothetical protein all5073 SWALL:Q8YM67 (EMBL:AP003598) (475 aa) fasta scores: E(): 7.4e-05, 22.01% id in 418 aa | genbank | 52209170 | CAH35114.1 | 432 | 1303673 | 1304971 | |
| 145890 | hypothetical | BPSL1122 | putative glycosyl transferase (LPS biosynthesis-related) Similar to Bacillus halodurans lipopolysaccharide biosynthesis bh3663 SWALL:Q9K6R4 (EMBL:AP001519) (373 aa) fasta scores: E(): 8.7e-19, 29.17% id in 401 aa, and to Fusobacterium nucleatum glycosyl transferase fn1245 SWALL:Q8R631 (EMBL:AE010630) (381 aa) fasta scores: E(): 2.6e-17, 27.19% id in 364 aa | genbank | 52209171 | CAH35115.1 | 420 | 1304968 | 1306230 | |
| 145891 | hypothetical | BPSL1123 | putative LPS core biosynthesis-related protein Similar to Escherichia coli lipopolysaccharide core biosynthesis glycosyl transferase RfaQ or WaaQ or b3632 SWALL:RFAQ_ECOLI (SWALL:P25742) (344 aa) fasta scores: E(): 1.8e-16, 26.62% id in 323 aa, and to Yersinia pestis putative lipopolysaccharide core biosynthesis protein ypo0416 SWALL:Q8ZIS3 (EMBL:AJ414142) (346 aa) fasta scores: E(): 5.2e-21, 32.66% id in 300 aa | genbank | 52209172 | CAH35116.1 | 394 | 1306305 | 1307489 | |
| 145892 | hypothetical | BPSL1123b | hypothetical protein Doubtful CDS. No significant database matches | genbank | 52209173 | CAH35117.1 | 88 | 1307464 | 1307730 | |
| 145893 | hypothetical | BPSL1124 | putative LPS biosynthesis-related protein Similar to Serratia marcescens lipopolysaccharide core biosynthesis glycosyl transferase KdtX SWALL:KDTX_SERMA (SWALL:Q54435) (257 aa) fasta scores: E(): 1.8e-33, 41.66% id in 252 aa, and to Ralstonia solanacearum probable glycosyl transferase protein rsc2202 or rs01397 SWALL:Q8XXB4 (EMBL:AL646068) (256 aa) fasta scores: E(): 1.2e-41, 50.59% id in 251 aa | genbank | 52209174 | CAH35118.1 | 254 | 1307754 | 1308518 | |
| 145894 | hypothetical | BPSL1125 | putative exported protein Similar to Ralstonia solanacearum probable transmembrane protein rsc0815 or rs05007 SWALL:Q8Y175 (EMBL:AL646061) (132 aa) fasta scores: E(): 1.5e-17, 47.72% id in 132 aa, and to Rhizobium meliloti hypothetical transmembrane signal peptide protein r01916 or smc04246 SWALL:Q92K77 (EMBL:AL591788) (126 aa) fasta scores: E(): 1.1e-05, 36.66% id in 120 aa | genbank | 52209175 | CAH35119.1 | 126 | 1308976 | 1309356 | |
| 145895 | hypothetical | BPSL1126 | putative membrane protein No significant database matches | genbank | 52209176 | CAH35120.1 | 197 | 1309637 | 1310230 | |
| 145896 | hypothetical | BPSL1127 | putative ABC transport system, integral membrane protein Similar to Mycobacterium tuberculosis transmembrane transport protein rv2456c or mtv008.12c or mt2531 SWALL:O53183 (EMBL:AL021246) (418 aa) fasta scores: E(): 6.3e-41, 36.74% id in 411 aa, and to Xanthomonas axonopodis pv. citri str. 306 MFS transporter xac0229 SWALL:AAM35121 (EMBL:AE011647) (409 aa) fasta scores: E(): 2.4e-34, 36.13% id in 393 aa | genbank | 52209177 | CAH35121.1 | 422 | 1310507 | 1311775 | |
| 145897 | hypothetical | BPSL1128 | putative lipoprotein No significant database matches | genbank | 52209178 | CAH35122.1 | 327 | 1311772 | 1312755 | |
| 145898 | hypothetical | BPSL1129 | conserved hypothetical protein Similar to Escherichia coli O157:H7 hypothetical protein z3974 or ecs3535 SWALL:Q8X921 (EMBL:AE005496) (143 aa) fasta scores: E(): 6.1e-23, 48.55% id in 138 aa, and to Pseudomonas aeruginosa hypothetical protein a0269 SWALL:Q9I6M1 (EMBL:AE004465) (145 aa) fasta scores: E(): 4.8e-21, 44.44% id in 135 aa | genbank | 52209179 | CAH35123.1 | 150 | 1313442 | 1313894 | |
| 145899 | hypothetical | BPSL1130 | putative sigma factor Similar to Caulobacter crescentus putative RNA polymerase sigma factor cc3266 SWALL:Q9A3D8 (EMBL:AE005990) (291 aa) fasta scores: E(): 9.8e-42, 44.84% id in 281 aa, and to Streptomyces coelicolor putative RNA polymerase sigma factor sco1263 or 2scg18.10C SWALL:Q9K3H7 (EMBL:AL390188) (295 aa) fasta scores: E(): 1.5e-41, 45.93% id in 283 aa | genbank | 52209180 | CAH35124.1 | 297 | 1314397 | 1315290 | |
| 145900 | pseudogene | pseudogene | BPSL1131 | conserved hypothetical protein (pseudogene) Pseudogene. Similar to Yersinia pestis hypothetical protein ypo0904 SWALL:Q8ZHI9 (EMBL:AJ414145) (145 aa) fasta scores: E(): 2.4e-11, 34.78% id in 138 aa | genbank | 87 | 1315468 | 1315731 | ||
| 145901 | hypothetical | BPSL1132 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc2198 or rs01401 SWALL:Q8XXB8 (EMBL:AL646068) (96 aa) fasta scores: E(): 1.5e-25, 68.04% id in 97 aa | genbank | 52209181 | CAH35126.1 | 97 | 1316037 | 1316330 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 145902 | hypothetical | BPSL1133 | hypothetical protein No significant database matches | genbank | 52209182 | CAH35127.1 | 117 | 1317018 | 1317371 | |
| 145903 | hypothetical | BPSL1134 | hypothetical protein No significant database matches | genbank | 52209183 | CAH35128.1 | 226 | 1318558 | 1319238 | |
| 145904 | hypothetical | BPSL1135 | hypothetical protein No significant database matches | genbank | 52209184 | CAH35129.1 | 465 | 1319300 | 1320697 | |
| 145905 | hypothetical | BPSL1136 | putative membrane protein Similar to Bacillus subtilis uric acid permease PucJ SWALL:PUCJ_BACSU (SWALL:O32139) (449 aa) fasta scores: E(): 2.7e-34, 37.02% id in 424 aa, and to Pseudomonas aeruginosa probable transporter pa0352 SWALL:Q9I6E1 (EMBL:AE004473) (461 aa) fasta scores: E(): 1.1e-134, 82.65% id in 444 aa | genbank | 52209185 | CAH35130.1 | 462 | 1320725 | 1322113 | |
| 145906 | hypothetical | BPSL1137 | hypothetical protein Very low similarity to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related regulatory protein cII SWALL:AAM43407 (EMBL:AE012545) (339 aa) fasta scores: E(): 7.8e-10, 28.01% id in 332 aa | genbank | 52209186 | CAH35131.1 | 363 | 1322871 | 1323962 | |
| 145907 | hypothetical | BPSL1138 | hypothetical protein Very low similarity to the C-terminal regions of Clostridium perfringens hypothetical protein cpe1605 SWALL:Q8XJZ8 (EMBL:AP003191) (269 aa) fasta scores: E(): 1.6e-15, 32.86% id in 216 aa, and of Bacillus anthracis pxo1-131 SWALL:Q9X388 (EMBL:AF065404) (349 aa) fasta scores: E(): 6.8e-13, 32.67% id in 202 aa | genbank | 52209187 | CAH35132.1 | 232 | 1323959 | 1324657 | |
| 145908 | hypothetical | BPSL1139 | hypothetical protein No significant database matches | genbank | 52209188 | CAH35133.1 | 105 | 1325353 | 1325670 | |
| 145909 | hypothetical | BPSL1140 | putative phage-related protein Similar to Escherichia coli O157:H7 putative portal protein for prophage cp-933v z3328 SWALL:Q8X3L1 (EMBL:AE005441) (861 aa) fasta scores: E(): 1.2e-60, 43.4% id in 417 aa, and to Bacteriophage phiE125 gp4 4 SWALL:Q8W6U7 (EMBL:AF447491) (419 aa) fasta scores: E(): 1.5e-19, 27.34% id in 384 aa | genbank | 52209189 | CAH35134.1 | 429 | 1325660 | 1326949 | |
| 145910 | hypothetical | BPSL1141 | hypothetical protein No significant database matches | genbank | 52209190 | CAH35135.1 | 59 | 1326949 | 1327128 | |
| 145911 | hypothetical | BPSL1142 | putative phage-related protein Similar to Escherichia coli O157:H7 hypothetical protein z1804 SWALL:Q8X3S4 (EMBL:AE005324) (645 aa) fasta scores: E(): 3.9e-63, 42.81% id in 647 aa, and to Bacteriophage phiE125 gp6 6 SWALL:Q8W6U5 (EMBL:AF447491) (435 aa) fasta scores: E(): 3.9e-15, 27.29% id in 447 aa | genbank | 52209191 | CAH35136.1 | 631 | 1327141 | 1329036 | |
| 145912 | hypothetical | BPSL1143 | putative phage terminase Similar to Bacteriophage HK97 terminase large subunit 2 SWALL:Q9MCT1 (EMBL:AF069529) (504 aa) fasta scores: E(): 3.5e-82, 46.76% id in 494 aa, and to Escherichia coli O157:H7 putative terminase large subunit ecs1598 SWALL:Q8X2A3 (EMBL:AP002555) (553 aa) fasta scores: E(): 1e-27, 29.3% id in 488 aa | genbank | 52209192 | CAH35137.1 | 506 | 1329087 | 1330607 | |
| 145913 | hypothetical | BPSL1144 | putative exported protein No significant database matches | genbank | 52209193 | CAH35138.1 | 146 | 1330589 | 1331029 | |
| 145914 | hypothetical | BPSL1145 | putative phage-related protein Similar to Bacteriophage P27 hypothetical 13.0 kDa protein SWALL:Q8W633 (EMBL:AJ298298) (116 aa) fasta scores: E(): 4.5e-10, 53.52% id in 71 aa, and to Haemophilus influenzae phage phi-105 holin-like protein SWALL:Q9L8N1 (EMBL:AF198256) (128 aa) fasta scores: E(): 6.5e-07, 36.17% id in 94 aa | genbank | 52209194 | CAH35139.1 | 97 | 1331134 | 1331427 | |
| 145915 | hypothetical | BPSL1146 | hypothetical protein No significant database matches | genbank | 52209195 | CAH35140.1 | 182 | 1332197 | 1332745 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 145916 | hypothetical | BPSL1147 | hypothetical protein No significant database matches | genbank | 52209196 | CAH35141.1 | 75 | 1332745 | 1332972 | |
| 145917 | hypothetical | BPSL1148 | hypothetical protein No significant database matches | genbank | 52209197 | CAH35142.1 | 97 | 1332969 | 1333262 | |
| 145918 | hypothetical | BPSL1149 | hypothetical protein No significant database matches | genbank | 52209198 | CAH35143.1 | 92 | 1333198 | 1333476 | |
| 145919 | hypothetical | BPSL1150 | hypothetical protein No significant database matches | genbank | 52209199 | CAH35144.1 | 83 | 1333469 | 1333720 | |
| 145920 | hypothetical | BPSL1151 | hypothetical protein Very low similarity in the C-terminal region to Ralstonia solanacearum hypothetical protein rsc2485 or rs01110 SWALL:Q8XWI9 (EMBL:AL646070) (106 aa) fasta scores: E(): 7, 36.5% id in 63 aa | genbank | 52209200 | CAH35145.1 | 60 | 1333713 | 1333895 | |
| 145921 | hypothetical | BPSL1152 | hypothetical protein No significant database matches | genbank | 52209201 | CAH35146.1 | 74 | 1333892 | 1334116 | |
| 145922 | hypothetical | BPSL1153 | hypothetical protein No significant database matches | genbank | 52209202 | CAH35147.1 | 67 | 1334094 | 1334297 | |
| 145923 | hypothetical | BPSL1153A | hypothetical protein No significant database matches | genbank | 52209203 | CAH35148.1 | 101 | 1334456 | 1334761 | |
| 145924 | hypothetical | BPSL1154 | hypothetical protein No significant database matches | genbank | 52209204 | CAH35149.1 | 128 | 1334758 | 1335144 | |
| 145925 | hypothetical | BPSL1155 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc2487 or rs05745 SWALL:Q8XWI7 (EMBL:AL646070) (68 aa) fasta scores: E(): 3.4e-13, 60.6% id in 66 aa | genbank | 52209205 | CAH35150.1 | 76 | 1335125 | 1335355 | |
| 145926 | hypothetical | BPSL1156 | hypothetical protein No significant database matches | genbank | 52209206 | CAH35151.1 | 151 | 1335523 | 1335978 | |
| 145927 | hypothetical | BPSL1157 | putative phage integrase Similar to Xanthomonas axonopodis pv. citri str. 306 phage-related integrase IntS SWALL:AAM37139 (EMBL:AE011866) (408 aa) fasta scores: E(): 1.4e-17, 27.46% id in 426 aa, and to Bacteriophage phi-80 Integrase Int SWALL:VINT_BPPH8 (SWALL:P06155) (402 aa) fasta scores: E(): 1.6e-15, 23.07% id in 403 aa | genbank | 52209207 | CAH35152.1 | 413 | 1336223 | 1337464 | |
| 145928 | cafA | hypothetical | BPSL1158 | ribonuclease G Similar to Escherichia coli, and Escherichia coli O157:H7 ribonuclease G CafA or Rng or b3247 or z4605 or ecs4119 SWALL:RNG_ECOLI (SWALL:P25537) (488 aa) fasta scores: E(): 7.6e-103, 56.21% id in 491 aa, and to Ralstonia solanacearum probable ribonuclease G rsc2197 or rs01402 SWALL:Q8XXB9 (EMBL:AL646068) (489 aa) fasta scores: E(): 4.7e-152, 81.83% id in 490 aa | genbank | 52209208 | CAH35153.1 | 488 | 1337638 | 1339104 |
| 145929 | hypothetical | BPSL1159 | Maf-like protein Similar to Ralstonia solanacearum Maf-like protein rsc2196 or rs01403 SWALL:YL96_RALSO (SWALL:P58634) (207 aa) fasta scores: E(): 1.5e-40, 64.11% id in 209 aa, and to Escherichia coli Maf-like protein YhdE or b3248 SWALL:YHDE_ECOLI (SWALL:P25536) (197 aa) fasta scores: E(): 3.1e-14, 43.97% id in 191 aa. Note: Most of the rest of the database matches are shorter in ther N-terminal region to BPSL1159 | genbank | 52209209 | CAH35154.1 | 209 | 1339113 | 1339742 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 145930 | hypothetical | BPSL1160 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc2195 or rs01404 SWALL:Q8XXC0 (EMBL:AL646068) (156 aa) fasta scores: E(): 4.9e-43, 77.41% id in 155 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YbeA or b0636 or z0782 or ecs0674 SWALL:YBEA_ECOLI (SWALL:P05850) (155 aa) fasta scores: E(): 2.3e-25, 50.96% id in 155 aa | genbank | 52209210 | CAH35155.1 | 156 | 1339795 | 1340265 | |
| 145931 | hypothetical | BPSL1161 | conserved hypothetical protein Similar to, although shorter in its C-terminal region than, Ralstonia solanacearum hypothetical protein rsc2194 or rs01405 SWALL:Q8XXC1 (EMBL:AL646068) (203 aa) fasta scores: E(): 6.6e-39, 72.43% id in 156 aa, and to, although longer in its C-terminal region than, Escherichia coli hypothetical protein YbeB or b0637 SWALL:YBEB_ECOLI (SWALL:P05848) (105 aa) fasta scores: E(): 1.1e-09, 33.65% id in 104 aa | genbank | 52209211 | CAH35156.1 | 154 | 1340322 | 1340786 | |
| 145932 | hypothetical | BPSL1162 | putative nicotinate-nucleotide adenylyltransferase Similar to Escherichia coli nicotinate-nucleotide adenylyltransferase NadD or b0639 SWALL:NADD_ECOLI (SWALL:P52085) (213 aa) fasta scores: E(): 2.7e-13, 28.89% id in 218 aa, and to Pseudomonas aeruginosa probable nicotinate-nucleotide adenylyltransferase pa4006 SWALL:NADD_PSEAE (SWALL:Q9HX21) (214 aa) fasta scores: E(): 5.3e-15, 35.11% id in 225 aa. Note This CDS is longer in its N-terminal region than most of its database matches | genbank | 52209212 | CAH35157.1 | 250 | 1340791 | 1341543 | |
| 145933 | hemF | hypothetical | BPSL1163 | coproporphyrinogen III oxidase, aerobic Similar to Escherichia coli coproporphyrinogen III oxidase, aerobic HemF or b2436 SWALL:HEM6_ECOLI (SWALL:P36553) (299 aa) fasta scores: E(): 2e-77, 61.66% id in 300 aa, and to Ralstonia solanacearum coproporphyrinogen III oxidase, aerobic rsc2192 or rs01407 SWALL:HEM6_RALSO (SWALL:Q8XXC3) (302 aa) fasta scores: E(): 3.5e-96, 73.33% id in 300 aa | genbank | 52209213 | CAH35158.1 | 307 | 1341540 | 1342463 |
| 145934 | purD | hypothetical | BPSL1164 | phosphoribosylamine--glycine ligase Similar to Escherichia coli phosphoribosylamine--glycine ligase PurD or b4005 SWALL:PUR2_ECOLI (SWALL:P15640) (429 aa) fasta scores: E(): 1.5e-94, 60.42% id in 427 aa, and to Ralstonia solanacearum phosphoribosylamine--glycine ligase rsc2191 or rs01408 SWALL:PUR2_RALSO (SWALL:Q8XXC4) (422 aa) fasta scores: E(): 3.5e-122, 74.88% id in 422 aa | genbank | 52209214 | CAH35159.1 | 425 | 1342594 | 1343871 |
| 145935 | hypothetical | BPSL1165 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc2190 or rs01409 SWALL:Q8XXC5 (EMBL:AL646068) (241 aa) fasta scores: E(): 3.5e-75, 84.64% id in 241 aa, and to Escherichia coli protein YebC or b1864 SWALL:YEBC_ECOLI (SWALL:P24237) (246 aa) fasta scores: E(): 7.5e-53, 61.57% id in 242 aa | genbank | 52209215 | CAH35160.1 | 242 | 1343982 | 1344710 | |
| 145936 | upp | hypothetical | BPSL1166 | uracil phosphoribosyltransferase Similar to Escherichia coli, and Escherichia coli O157:H7 uracil phosphoribosyltransferase Upp or UraP or b2498 or z3761 or ecs3360 SWALL:UPP_ECOLI (SWALL:P25532) (208 aa) fasta scores: E(): 2.1e-33, 49.02% id in 206 aa, and to Lactococcus lactis uracil phosphoribosyltransferase Upp SWALL:UPP_LACLC (SWALL:P50926) (211 aa) fasta scores: E(): 7.5e-46, 59.22% id in 206 aa. Note: This CDS is longer in its N-terminal region than most of its database matches | genbank | 52209216 | CAH35161.1 | 216 | 1345220 | 1345870 |
| 145937 | hypothetical | BPSL1167 | putative dehydrogenase Similar to Xanthomonas axonopodis pv. citri str. 306 oxidoreductase xac0384 SWALL:AAM35276 (EMBL:AE011664) (260 aa) fasta scores: E(): 1.7e-66, 71.53% id in 260 aa, and to Ralstonia solanacearum probable dehydrogenase/reductase oxidoreductase protein rsc2186 or rs01413 SWALL:Q8XXC9 (EMBL:AL646068) (263 aa) fasta scores: E(): 3e-61, 67.3% id in 263 aa | genbank | 52209217 | CAH35162.1 | 259 | 1346128 | 1346907 | |
| 145938 | mgsA | hypothetical | BPSL1168 | methylglyoxal synthase Similar to, although shorter in its N-terminal region than, Escherichia coli, and Escherichia coli O157:H7 methylglyoxal synthase MgsA or b0963 or z1314 or ecs1047 SWALL:MGSA_ECOLI (SWALL:P37066) (152 aa) fasta scores: E(): 7e-17, 48.24% id in 114 aa, and to Ralstonia solanacearum methylglyoxal synthase rsc2185 or rs01414 SWALL:MGSA_RALSO (SWALL:Q8XXD0) (135 aa) fasta scores: E(): 6.2e-28, 68.69% id in 115 aa | genbank | 52209218 | CAH35163.1 | 130 | 1347137 | 1347529 |
| 145939 | qor | hypothetical | BPSL1169 | quinone oxidoreductase Similar to Escherichia coli quinone oxidoreductase Qor or Hcz or b4051 SWALL:QOR_ECOLI (SWALL:P28304) (327 aa) fasta scores: E(): 1.6e-53, 47.7% id in 327 aa, and to Ralstonia solanacearum probable NADPH:quinone reductase, zeta-crystallin homolog oxidoreductase protein rsc2184 or rs01415 SWALL:Q8XXD1 (EMBL:AL646068) (324 aa) fasta scores: E(): 7.2e-86, 70.67% id in 324 aa | genbank | 52209219 | CAH35164.1 | 324 | 1348381 | 1349355 |
| 145940 | hypothetical | BPSL1170 | putative membrane protein Similar to Xanthomonas campestris pv. campestris str. ATCC 33913 conserved hypothetical protein xcc0701 SWALL:AAM40017 (EMBL:AE012169) (30 aa) fasta scores: E(): 0.11, 44.44% id in 27 aa, and to Escherichia coli protein KdpF or b0698.1 SWALL:KDPF_ECOLI (SWALL:P36937) (29 aa) fasta scores: E(): 4.4, 73.33% id in 15 aa | genbank | 52209220 | CAH35165.1 | 30 | 1349820 | 1349912 | |
| 145941 | kdpA | hypothetical | BPSL1171 | potassium-transporting ATPase a chain Similar to Escherichia coli potassium-transporting ATPase A chain KdpA or b0698 SWALL:ATKA_ECOLI (SWALL:P03959) (557 aa) fasta scores: E(): 2.2e-84, 56.13% id in 595 aa, and to Ralstonia solanacearum probable potassium-transporting ATPase a chain transmembrane protein rsc3382 or rs02656 SWALL:Q8XU12 (EMBL:AL646075) (590 aa) fasta scores: E(): 4.9e-150, 67.05% id in 595 aa. Note: There is a small region in BPSL1171 between residue 210 and residue 250 that does not have similarities with most of the database matches | genbank | 52209221 | CAH35166.1 | 602 | 1349909 | 1351717 |
| 145942 | kdpB | hypothetical | BPSL1172 | potassium-transporting ATPase b chain Similar to Escherichia coli potassium-transporting ATPase b chain KdpB or b0697 SWALL:ATKB_ECOLI (SWALL:P03960) (682 aa) fasta scores: E(): 4e-117, 73.17% id in 686 aa, and to Yersinia pestis putative potassium-transporting ATPase b chain ypo2691 SWALL:Q8ZD97 (EMBL:AJ414153) (688 aa) fasta scores: E(): 1.2e-181, 77.45% id in 683 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches | genbank | 52209222 | CAH35167.1 | 686 | 1351813 | 1353873 |
| 145943 | kdpC | hypothetical | BPSL1173 | potassium-transporting ATPase c chain Similar to Escherichia coli potassium-transporting ATPase C chain KdpC or b0696 SWALL:ATKC_ECOLI (SWALL:P03961) (190 aa) fasta scores: E(): 1.7e-26, 50.81% id in 185 aa, and to Rhizobium loti potassium-transporting ATPase C chain mll3129 SWALL:Q98GX7 (EMBL:AP003001) (187 aa) fasta scores: E(): 2.2e-30, 55.78% id in 190 aa | genbank | 52209223 | CAH35168.1 | 193 | 1353886 | 1354467 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 145944 | kdpD | hypothetical | BPSL1174 | two-component system, sensor kinase protein KdpD Similar to Escherichia coli sensor protein KdpD or b0695 SWALL:KDPD_ECOLI (SWALL:P21865) (894 aa) fasta scores: E(): 8.8e-93, 49.39% id in 913 aa, and to Salmonella typhi sensor protein sty0744 SWALL:Q8Z8E7 (EMBL:AL627267) (902 aa) fasta scores: E(): 3.5e-97, 48.91% id in 924 aa. Note: This CDS is longer in its C-terminal region than most of its database matches | genbank | 52209224 | CAH35169.1 | 993 | 1354752 | 1357733 |
| 145945 | kdpE | hypothetical | BPSL1175 | two-component system, regulatory protein KdpE Similar to Escherichia coli kdp operon transcriptional regulatory protein KdpE or b0694 SWALL:KDPE_ECOLI (SWALL:P21866) (225 aa) fasta scores: E(): 3.6e-56, 65.31% id in 222 aa, and to Salmonella typhimurium response regulator in two-component regulatory system with KdpD, regulates kdp operon encoding a high-affinity K translocating ATPase stm0702 SWALL:Q8ZQW5 (EMBL:AE008728) (225 aa) fasta scores: E(): 2.8e-55, 63.51% id in 222 aa | genbank | 52209225 | CAH35170.1 | 232 | 1357726 | 1358424 |
| 145946 | hypothetical | BPSL1176 | conserved hypothetical protein Similar to Rhizobium loti hypothetical protein msl2463 SWALL:Q98IC7 (EMBL:AP002999) (89 aa) fasta scores: E(): 1.5e-07, 40.22% id in 87 aa | genbank | 52209226 | CAH35171.1 | 98 | 1358812 | 1359108 | |
| 145947 | sugE | hypothetical | BPSL1177 | putative chaperone Similar to Escherichia coli SugE protein or b4148 SWALL:SUGE_ECOLI (SWALL:P30743) (105 aa) fasta scores: E(): 5e-20, 61.53% id in 104 aa, and to Yersinia pestis putative chaperone ypo0355 SWALL:Q8ZIX9 (EMBL:AJ414142) (104 aa) fasta scores: E(): 1.3e-20, 63.46% id in 104 aa | genbank | 52209227 | CAH35172.1 | 106 | 1359324 | 1359644 |
| 145948 | hypothetical | BPSL1178 | putative membrane protein Similar to Ralstonia solanacearum probable transmembrane protein rsc2467 or rs01138 SWALL:Q8XWK7 (EMBL:AL646070) (206 aa) fasta scores: E(): 7.7e-39, 60.98% id in 182 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 conserved hypothetical protein xcc0485 SWALL:AAM39801 (EMBL:AE012145) (208 aa) fasta scores: E(): 3.8e-24, 48.88% id in 180 aa | genbank | 52209228 | CAH35173.1 | 205 | 1359836 | 1360453 | |
| 145949 | hypothetical | BPSL1179 | putative membrane protein Similar to Ralstonia solanacearum probable transmembrane protein rsc2091 or rs03656 SWALL:Q8XXM2 (EMBL:AL646068) (843 aa) fasta scores: E(): 1.3e-140, 54.94% id in 859 aa, and to Escherichia coli hypothetical protein YbbP or b0496 SWALL:YBBP_ECOLI (SWALL:P77504) (804 aa) fasta scores: E(): 1.4e-29, 32.15% id in 852 aa | genbank | 52209229 | CAH35174.1 | 880 | 1360450 | 1363092 | |
| 145950 | hypothetical | BPSL1180 | putative globin Identical to the C-terminal region of the previously sequenced Burkholderia pseudomallei putative globin SWALL:Q93SP0 (EMBL:AY030274) (170 aa) fasta scores: E(): 1.3e-64, 99.32% id in 148 aa, and to Ralstonia solanacearum putative oxygen-binding protein rsc2090 or rs03655 SWALL:Q8XXM3 (EMBL:AL646068) (134 aa) fasta scores: E(): 1.1e-41, 74.43% id in 133 aa, and to Mycobacterium tuberculosis, and Mycobacterium bovis hemoglobin-like protein hbo GlbO or rv2470 or mt2546 or mtv008.26 SWALL:GLBO_MYCTU (SWALL:O53197) (128 aa) fasta scores: E(): 1.5e-10, 37.2% id in 129 aa. Note: The N-terminal region of the previously sequenced database match (SWALL:Q93SP0) does not coincide with the one in BPSL1180, being the first one longer than this CDS. Also this CDS is longer in its N-terminal region than most of its database matches | genbank | 52209230 | CAH35175.1 | 148 | 1363156 | 1363602 | |
| 145951 | hypothetical | BPSL1181 | putative alanyl-tRNA synthetase Similar to Rhizobium loti alanyl-tRNA synthetase mlr0354 SWALL:Q98N10 (EMBL:AP002994) (248 aa) fasta scores: E(): 5e-35, 47.71% id in 241 aa, and to parts of Escherichia coli alanyl-tRNA synthetase AlaS or LovB or b2697 SWALL:SYA_ECOLI (SWALL:P00957) (876 aa) fasta scores: E(): 5.5e-08, 34.61% id in 234 aa | genbank | 52209231 | CAH35176.1 | 243 | 1363713 | 1364444 | |
| 145952 | hypothetical | BPSL1182 | conserved hypothetical protein Similar to Ralstonia solanacearum putative transmembrane protein rsc2089 or rs03654 SWALL:Q8XXM4 (EMBL:AL646068) (192 aa) fasta scores: E(): 1e-31, 53.15% id in 190 aa, and to Brucella melitensis hypothetical protein bmei0803 SWALL:Q8YHJ5 (EMBL:AE009522) (208 aa) fasta scores: E(): 2.3e-22, 38.61% id in 202 aa. Note: Has a posibble alternative start codon at residue 28 | genbank | 52209232 | CAH35177.1 | 213 | 1364441 | 1365082 | |
| 145953 | hypothetical | BPSL1183 | putative glutamyl-tRNA amidotransferase Similar to Pseudomonas aeruginosa probable amidase pa0704 SWALL:Q9I5M2 (EMBL:AE004506) (464 aa) fasta scores: E(): 3.4e-115, 64.79% id in 463 aa, and to Agrobacterium tumefaciens glutamyl-tRNA amidotransferase subunit A atu4441 or agr_l_854 SWALL:Q8U7K8 (EMBL:AE009373) (465 aa) fasta scores: E(): 4.1e-103, 58.96% id in 463 aa. Note: It has a possible alternative start codon located in the intergenic region, 75 bp upstream | genbank | 52209233 | CAH35178.1 | 464 | 1365426 | 1366820 | |
| 145954 | hypothetical | BPSL1184 | putative sugar-related transport, membrane protein Similar to Pseudomonas aeruginosa probable MFS transporter pa0703 SWALL:Q9I5M3 (EMBL:AE004506) (438 aa) fasta scores: E(): 3.5e-108, 69.92% id in 419 aa, and to Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 4.3e-48, 36.79% id in 405 aa | genbank | 52209234 | CAH35179.1 | 438 | 1367068 | 1368384 | |
| 145955 | hypothetical | BPSL1185 | putative membrane protein Similar to Ralstonia solanacearum probable inner membrane transmembrane protein rsc1181 or rs05713 SWALL:Q8Y063 (EMBL:AL646063) (598 aa) fasta scores: E(): 1.1e-27, 26.4% id in 625 aa, and to Neisseria meningitidis hypothetical protein nmb1954 SWALL:Q9JXN7 (EMBL:AE002543) (553 aa) fasta scores: E(): 0.0026, 27.36% id in 570 aa. Note: This CDS is longer in its N-terminal region than most of its database matches | genbank | 52209235 | CAH35180.1 | 635 | 1368695 | 1370602 | |
| 145956 | hypothetical | BPSL1186 | putative dehydrogenase Similar to Bacillus megaterium glucose 1-dehydrogenase II GdhII SWALL:DHG2_BACME (SWALL:P39483) (261 aa) fasta scores: E(): 3e-23, 36.25% id in 251 aa, and to Ralstonia solanacearum putative oxidoreductase protein rsc2504 or rs01091 SWALL:Q8XWH0 (EMBL:AL646070) (248 aa) fasta scores: E(): 9.1e-57, 69.91% id in 246 aa. Note: This CDS is longer in its N-terminal region than most of its database matches and could have an alternative start codon at residue 20 | genbank | 52209236 | CAH35181.1 | 271 | 1371117 | 1371932 | |
| 145957 | hypothetical | BPSL1187 | putative decarboxylase Similar to Pseudomonas aeruginosa hypothetical protein pa4923 SWALL:YDC3_PSEAE (SWALL:P48636) (195 aa) fasta scores: E(): 2.6e-39, 56.68% id in 187 aa, and to Rhodococcus fascians hypothetical 21.1 kDa protein in fasciation locus Fas6 SWALL:FAS6_RHOFA (SWALL:P46378) (198 aa) fasta scores: E(): 2.1e-28, 53.89% id in 154 aa. Note: This CDS is shorter in its N-terminal region than some of its database matches | genbank | 52209237 | CAH35182.1 | 195 | 1372307 | 1372894 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 145958 | hypothetical | BPSL1188 | putative TetR-family transcriptional regulator Similar to Ralstonia solanacearum putative transcription regulator protein rsc2086 or rs03651 SWALL:Q8XXM7 (EMBL:AL646068) (231 aa) fasta scores: E(): 3.1e-60, 65.45% id in 220 aa, and to Alcanivorax borkumensis PhaD SWALL:Q9F9H1 (EMBL:AF193866) (233 aa) fasta scores: E(): 4.6e-17, 33.03% id in 221 aa | genbank | 52209238 | CAH35183.1 | 239 | 1372891 | 1373610 |