C57BL/6J hippocalcin (Hpca) (Hpca)

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UGID:2831662 UniGene Mm.443017 Mus musculus (mouse) Hpca

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C57BL/6J hippocalcin (Hpca) (Hpca)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001123891.1	hippocalcin	M. musculus	100.0	192
NP_058818.1	hippocalcin	R. norvegicus	100.0	192
NP_002134.2	hippocalcin	H. sapiens	100.0	192
XP_854592.1	PREDICTED: similar to Neuron specific calcium-binding protein hippocalcin (P23K)	C. lupus familiaris	100.0	192
NP_001116597.1	hippocalcin	S. scrofa	100.0	192
NP_001020499.1	hippocalcin	B. taurus	100.0	192
NP_001086940.1	hippocalcin	X. laevis	96.4	192
NP_957017.1	hippocalcin	D. rerio	95.8	192
NP_788543.1	Neurocalcin CG7641-PA	D. melanogaster	89.4	189
XP_323732.1	hypothetical protein	N. crassa	63.4	183
NP_508186.1	Neuronal Calcium Sensor family member (ncs-1)	C. elegans	62.3	183
NP_010661.1	N-myristoylated calcium-binding protein that may have a role in intracellular signaling through its regulation of the phosphatidylinositol 4-kinase Pik1p; member of the recoverin/frequenin branch of the EF-hand superfamily; Frq1p	S. cerevisiae	53.0	183

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; uncharacterized tissue; embryonic tissue; pineal gland; eye; tongue; lung

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	4
Map position:	4 D2-D3
UniSTS entry:	Chr 4	(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BC049607.1	Mus musculus hippocalcin, mRNA (cDNA clone MGC:58279 IMAGE:6595363), complete cds	PA
BC058588.1	Mus musculus hippocalcin, mRNA (cDNA clone MGC:68173 IMAGE:5360894), complete cds	PA
NM_001130419.1	Mus musculus hippocalcin (Hpca), mRNA	PA
NM_010471.3	Mus musculus hippocalcin (Hpca), mRNA	PA
AF326552.1	Mus musculus DBA/2J hippocalcin (Hpca) mRNA, complete cds	P
AF326551.1	Mus musculus C57BL/6J hippocalcin (Hpca) mRNA, complete cds	P

EST sequences (10 of 127) [Show all sequences]

BY255808.1	Clone K330020K05	brain	5' read	P
BY272262.1	Clone K430051I18	brain	5' read	P
BY274143.1	Clone K430304M16	brain	5' read	P
BY356164.1	Clone 2310057H24	tongue	3' read	P
BY452983.1	Clone K630066B21	brain	3' read
BY604893.1	Clone K230035J06	brain	3' read	A
BY636462.1	Clone K430304M16	brain	3' read	A
BY653619.1	Clone K530311A11	brain	3' read
BY703444.1	Clone 0710005G22	brain	5' read	P
BY128037.1	Clone L630064K05	brain	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria