Mitochondrial carnitine palmitoyltransferase I (CPT1A)

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Finding cDNAs

UGID:718202 UniGene Hs.503043 Homo sapiens (human) CPT1A

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Mitochondrial carnitine palmitoyltransferase I (CPT1A)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001867.2	carnitine palmitoyltransferase 1A isoform 1	H. sapiens	100.0	772
XP_001173820.1	PREDICTED: carnitine palmitoyltransferase 1A isoform 2	P. troglodytes	99.9	772
NP_038523.2	carnitine palmitoyltransferase 1a, liver	M. musculus	89.4	772
NP_001079706.1	similar to carnitine palmitoyltransferase 1	X. laevis	80.3	767
XP_001922950.1	PREDICTED: similar to carnitine O-palmitoyltransferase I isoform 2	D. rerio	77.5	766
NP_523685.2	mitochondrial carnitine palmitoyltransferase I CG12891-PA, isoform A	D. melanogaster	59.7	760
NP_496721.2	Carnitine Palmitoyl Transferase family member (cpt-1)	C. elegans	51.5	765

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	intestine; brain; blood; mixed; eye; thymus; vascular; esophagus; thyroid; ovary; testis; kidney; uncharacterized tissue; mammary gland; prostate; placenta; muscle; mouth; connective tissue; cervix; bone marrow; embryonic tissue; trachea; uterus; bladder; skin; pancreas; bone; liver; lung; stomach; lymph node

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	11
Map position:	11q13.1-q13.2
UniSTS entry:	Chr 11	SHGC-32786
UniSTS entry:	Chr 11	WI-11974

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BT009791.1	Homo sapiens carnitine palmitoyltransferase 1A (liver) mRNA, complete cds	P
NM_001876.3	Homo sapiens carnitine palmitoyltransferase 1A (liver) (CPT1A), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA	PA
AK172798.1	Homo sapiens cDNA FLJ23959 fis, clone HEP14351, highly similar to Carnitine O-palmitoyltransferase I, mitochondrial liver isoform (EC 2.3.1.21)	PA
CR599853.1	full-length cDNA clone CS0DK009YI05 of HeLa cells Cot 25-normalized of Homo sapiens (human)	P
AK025307.1	Homo sapiens cDNA: FLJ21654 fis, clone COL08589, highly similar to HUMCAPA Homo sapiens mitochondrial carnitine palmitoyltransferase I mRNA	PA
NM_001031847.2	Homo sapiens carnitine palmitoyltransferase 1A (liver) (CPT1A), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA	PA
BC000185.1	Homo sapiens carnitine palmitoyltransferase 1A (liver), mRNA (cDNA clone MGC:1772 IMAGE:3352642), complete cds	PA
AJ420378.1	Homo sapiens partial mRNA for carnitine palmitoyltransferase I (CPT1A gene)
L39211.1	Homo sapiens mitochondrial carnitine palmitoyltransferase I mRNA, complete cds	P
AK314301.1	Homo sapiens cDNA, FLJ95058, highly similar to Homo sapiens carnitine palmitoyltransferase 1A (liver) (CPT1A),nuclear gene encoding mitochondrial protein, mRNA	P
AK309464.1	Homo sapiens cDNA, FLJ99505	P

EST sequences (10 of 205) [Show all sequences]

R28631.1	Clone IMAGE:133565	placenta	3' read	A
CB121352.1	Clone L3SNU475s1-21-C11	liver	5' read	A
CB112326.1	Clone L6ChoCK0-5-A05	liver	5' read
R32561.1	Clone IMAGE:133565	placenta	5' read	P
AI424750.1	Clone IMAGE:2089602	mixed	3' read	A
AI494179.1	Clone IMAGE:2130484	kidney	5' read
AI627951.1	Clone IMAGE:2285657	kidney	3' read	A
AU280055.1	Clone N1ESE1000022	embryonic tissue	5' read	P
F26312.1	Clone s4000052E10	muscle
AI670068.1	Clone IMAGE:2314886	prostate	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria