Joint Genome Institute Mouse Mapping Effort

Homology-Driven Assembly of a Sequence-Ready Mouse BAC Contig Map Spanning Regions Related to the 46Mb Gene-Rich Euchromatic Segments of Human Chromosome 19

Joomyeong Kim*, Laurie Gordon*, Paramvir Dehal, Hummy Badri, Mari Christensen, Matthew Groza, Chi Ha, Sha Hammond, Michelle Vargas, Edward Wehri, Mark Wagner, Anne Olsen, and Lisa Stubbs.

Genomics Division, Lawrence Livermore National Laboratory, 7000 East Avenue, L-441, Livermore, CA 94550,
and D.O.E. Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598.

Genomics2001, in press.

* these authors contributed equally to this work.

Figure 1
Comparative Map of Human Chromosome 19
Figure 2
Flowchart of Mapping Strategy

Figure 3
Human/Mouse EST Matches as Probes for BAC Contigs
Figure 4
A Restriction Map of ELL-NEUR Region in Mouse

Click on the image to view at full resolution.

Abstract
Open abstract for project overview and to navigate website.

Table 1: Summary of H19 Homology Segments Defines human chromosome 19 homology segments, and summarizes mapping data from corresponding mouse regions.
Table 2: Master Probe Table H19 sequencing tiling path with EST and mouse overgo probe links to related to mouse BACs.
Table 3: Gene Family Probe Table Describes probes developed from gene families on human chromosome 19.
Table 4: Mouse Sequencing Tiling Path Mouse sequencing tiling path by homology regions with links to restriction maps. Click below to jump to mouse homology segment of interest.
I	II	III	IV	V
VI	VII	VIII	IX	X
XI	XII	XIII	XIV	XV

Warning: Netscape on the Macintosh cannot currently display restriction maps.
To view restriction maps, use any Unix or PC versions of Netscape. Internet Explorer on all platforms is fully functional.

Mouse/Human whole chromosome maps

Map Legend (Text)
Map Legend (Graphic)
P Arm (full size)
Q Arm (full size)
P Arm (half size)
Q Arm (half size)

For more information on this subject, contact:

Lisa Stubbs, stubbs5@llnl.gov
Joo Kim, kim16@llnl.gov
Laurie Gordon, gordon2@llnl.gov

UCRL-MI-140069
Last modified: 7 March 2001

Figure 1 Comparative Map of Human Chromosome 19	Figure 2 Flowchart of Mapping Strategy
Figure 3 Human/Mouse EST Matches as Probes for BAC Contigs	Figure 4 A Restriction Map of ELL-NEUR Region in Mouse