Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss2772221	TSC-CSHL|TSC0915791		fwd/T	A/G	aaaaatgccacttttatgggctacggacac	aatagaaaattctcaaaagaagatatacaa	01/02/01	10/10/03	92	Genomic			unknown
ss6197789	SC_JCM|NT_008705.12_15610641		rev/B	C/T	ttgtatatcttcttttgagaattttctatt	gtgtccgtagcccataaaagtggcattttt	01/10/03	10/10/03	111	Genomic			unknown
ss15876352	SC_SNP|NT_008705.15_402755		rev/B	C/T	ttgtatatcttcttttgagaattttctatt	gtgtccgtagcccataaaagtggcattttt	11/17/03	08/14/07	120	Genomic			unknown
ss39835800	ABI|hCV26513586		rev/B	C/T	ttgtatatcttcttttgagaattttctatt	gtgtccgtagcccataaaagtggcattttt	07/16/05	07/16/05	126	Genomic			unknown
ss65795908	ILLUMINA|Human1-rs1891393		fwd/B	A/G	aaaaatgccacttttatgggctacggacac	aatagaaaattctcaaaagaagatatacaa	10/10/06	10/10/06	127	Genomic			unknown
ss66302284	AFFY|SNP_A-1849562		fwd/T	A/G	tatgggctacggacac	aatagaaaattctcaa	10/29/06	08/14/07	127	Genomic			unknown
ss69072810	PERLEGEN|PGP04364108		rev/B	C/T	ttgtatatcttcttttgagaattttctatt	gtgtccgtagcccataaaagtggcattttt	01/30/07	08/14/07	127	Genomic			unknown
ss74871901	ILLUMINA|ILMN_Human_1M_rs1891393		fwd/T	A/G	aaaaatgccacttttatgggctacggacac	aatagaaaattctcaaaagaagatatacaa	08/28/07	08/29/07	129	Genomic			unknown
ss75975028	AFFY|AFFY_6_1M_SNP_A-1849562		fwd/T	A/G	tatgggctacggacac	aatagaaaattctcaa	08/28/07	08/29/07	130	Genomic			unknown
ss80866901	HGSV|Cor18507_SNV_20070510.chr10_18467436		rev/B	C/T	ttgtatatcttcttttgagaattttctatt	gtgtccgtagcccataaaagtggcattttt	11/26/07	11/27/07	130	Genomic			unknown
ss88117561	BCMHGSC_JDW|JWB-0244403		rev/B	C/T	ttgtatatcttcttttgagaattttctatt	gtgtccgtagcccataaaagtggcattttt	02/26/08	02/27/08	129	Genomic			unknown

Fasta sequence   (Legend)

 TATATTAAAT TACATGAGAT ACAGTACTTT TCTCCTCAAA GATAAGCATA GACATTTTAA
 ACCTATCATC TCCACCATAG CACTGATTTG CGCCAGGCTT AAAGAATGGG TCTTGATACA
 GTTAAAGATT TAGCCATAAA GCATCATTGA TTTTCCTAAA CTTTGGTATT AAAAATGCCA
 CTTTTATGGG CTACGGACAC
 R
 AATAGAAAAT TCTCAAAAGA AGATATACAA ATGGCCAACA AACATATGAG AAAATGCTCA
 ACATCAATAA TGATCAGGGA AATGCAACTC AAAACCACAA AGTGATACCA CCTTACCCCT
 GTAAGAATGA CCATAATCAA AGAATCAAAA AACAGATGTT GGCATGGATG CAGTGATCAG
 GGAACACTTC TGCACTGCTG GTGGGAATGT AAACTAGTAC AGCCACTATG GAAAACAGTG
 TGGAGATTCC TTAAAGGACT AAAAGTAGAA CTACCATTTG ATGTAGCAAT GCCACTACTG
 GGTATCTACC CAGAGGAAAA GAAGTCATGA TTCAAAAAAT ATACTTGCAC ATGCATGTTT
 ACAGCAGCAC AATTCACAGT AGCAAAATTG TGGAACCAAC CCAAATGCCC ATCAATCAAC
 GAGGTGATAA AGAAACTCTG ATATATATGA TGATGGGATA CTACTCAGCC ATGAAAAGAA
 ATAAATTAAC AGCATTTGCA ATGACCTGGA TGAGATTAGA GACTATTATT CTAAGTGAAG
 TAACTCAGGA ATGGAAAATC GAACATCATA TGTTCTCACT GACATGTGGG AGCTAAGCTA
 TGAGGATGCA AAGGCATAAG AATGATACAA TGGACTTTGG TGACTTGGGG GGAAGTGTGG
 GAGGGGGCAC GGGATAAAAG ACAACAAATA TGGTGCAAGG TATACTGCTA GGTTGATGGG
 TGTACCAGGT TCTCACAAAT CTCCACTAAA GAACTTACTC ATGTAACCGA ATACCACCTG
 TACCCCAATA ACTTATGGAA AAATAAAATT AAAAAAATTA AAATGCCACT TTTATTTAAA
 TTTTGCTGAA TGTTAAACAG CAGCACTTAA ATATTGGTTT GTAATAATTT CTAAAATGGG
 AACATTTTGA ACAGCAACAA TCAGC

GeneView

Integrated Maps:

NCBI Resource Links

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	A/A	A/G	G/G	HWP	A	G
ss15876352	HapMap-CEU	European	120	IG	0.483	0.467	0.050		0.717	0.283
	HapMap-HCB	Asian	90	IG	0.378	0.289	0.333		0.522	0.478
	HapMap-JPT	Asian	90	IG	0.356	0.533	0.111		0.622	0.378
	HapMap-YRI	Sub-Saharan African	120	IG	0.183	0.617	0.200		0.492	0.508
ss66302284	HapMap-CEU	European	118	GF	0.492	0.458	0.051		0.720	0.280
	HapMap-HCB	Asian	90	GF	0.378	0.289	0.333		0.522	0.478
	HapMap-JPT	Asian	90	GF	0.356	0.533	0.111		0.622	0.378
	HapMap-YRI	Sub-Saharan African	120	GF	0.183	0.617	0.200		0.492	0.508
ss69072810	HapMap-CEU	European	120	GF	0.483	0.467	0.050		0.717	0.283
	HapMap-HCB	Asian	90	GF	0.378	0.289	0.333		0.522	0.478
	HapMap-JPT	Asian	90	GF	0.356	0.533	0.111		0.622	0.378
	HapMap-YRI	Sub-Saharan African	120	GF	0.183	0.617	0.200		0.492	0.508

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
DoubleHit found by:  BCM_SSAHASNP	UNKNOWN	UNKNOWN	UNKNOWN