BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SMT2137
(177 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15901503|ref|NP_346107.1| hypothetical protein SP_1668 [... 293 3e-78
gi|15903555|ref|NP_359105.1| hypothetical protein spr1512 [... 293 3e-78
gi|148993760|ref|ZP_01823187.1| hypothetical protein CGSSp9... 293 4e-78
gi|148997719|ref|ZP_01825283.1| hypothetical protein CGSSp1... 291 9e-78
gi|148984105|ref|ZP_01817400.1| hypothetical protein CGSSp3... 291 1e-77
gi|149006737|ref|ZP_01830423.1| hypothetical protein CGSSp1... 270 3e-71
gi|157074593|gb|ABV09276.1| putative membrane protein [Stre... 182 1e-44
gi|125717548|ref|YP_001034681.1| hypothetical protein SSA_0... 181 2e-44
gi|24379084|ref|NP_721039.1| hypothetical protein SMU.607 [... 140 3e-32
gi|125717549|ref|YP_001034682.1| hypothetical protein SSA_0... 139 5e-32
gi|157076434|gb|ABV11117.1| membrane protein, putative [Str... 134 2e-30
gi|146319003|ref|YP_001198715.1| Permease of the major faci... 132 6e-30
gi|81096713|ref|ZP_00875047.1| similar to unknown proteins ... 130 3e-29
gi|55821551|ref|YP_139993.1| Conserved hypothetical, predic... 120 3e-26
gi|116628262|ref|YP_820881.1| hypothetical protein STER_153... 120 4e-26
gi|15675336|ref|NP_269510.1| hypothetical protein SPy_1419 ... 104 2e-21
gi|77406744|ref|ZP_00783781.1| membrane protein, putative [... 103 4e-21
gi|77409087|ref|ZP_00785803.1| membrane protein, putative [... 103 4e-21
gi|22536934|ref|NP_687785.1| hypothetical protein SAG0770 [... 103 6e-21
gi|94994660|ref|YP_602758.1| hypothetical membrane spanning... 102 1e-20
gi|19746378|ref|NP_607514.1| hypothetical protein spyM18_14... 102 1e-20
gi|71910969|ref|YP_282519.1| hypothetical membrane spanning... 102 1e-20
gi|21910618|ref|NP_664886.1| hypothetical protein SpyM3_108... 102 1e-20
gi|28895694|ref|NP_802044.1| hypothetical protein SPs0782 [... 101 1e-20
gi|94988833|ref|YP_596934.1| hypothetical membrane spanning... 100 5e-20
gi|76800039|ref|ZP_00781961.1| membrane protein, putative [... 98 3e-19
gi|77414682|ref|ZP_00790816.1| putative membrane protein [S... 72 1e-11
gi|110801667|ref|YP_698137.1| hypothetical protein CPR_0812... 64 3e-09
gi|18309810|ref|NP_561744.1| hypothetical protein CPE0828 [... 64 4e-09
gi|110799294|ref|YP_695275.1| hypothetical protein CPF_0824... 64 5e-09
>gi|15901503|ref|NP_346107.1| hypothetical protein SP_1668 [Streptococcus pneumoniae TIGR4]
gi|111658552|ref|ZP_01409215.1| hypothetical protein SpneT_02000308 [Streptococcus pneumoniae
TIGR4]
gi|148988715|ref|ZP_01820148.1| hypothetical protein CGSSp6BS73_09324 [Streptococcus pneumoniae
SP6-BS73]
gi|149001952|ref|ZP_01826906.1| hypothetical protein CGSSp14BS69_09586 [Streptococcus pneumoniae
SP14-BS69]
gi|149011470|ref|ZP_01832717.1| hypothetical protein CGSSp19BS75_08667 [Streptococcus pneumoniae
SP19-BS75]
gi|149021238|ref|ZP_01835484.1| hypothetical protein CGSSp23BS72_00390 [Streptococcus pneumoniae
SP23-BS72]
gi|14973160|gb|AAK75747.1| hypothetical protein SP_1668 [Streptococcus pneumoniae TIGR4]
gi|147759761|gb|EDK66751.1| hypothetical protein CGSSp14BS69_09586 [Streptococcus pneumoniae
SP14-BS69]
gi|147764460|gb|EDK71391.1| hypothetical protein CGSSp19BS75_08667 [Streptococcus pneumoniae
SP19-BS75]
gi|147925916|gb|EDK76991.1| hypothetical protein CGSSp6BS73_09324 [Streptococcus pneumoniae
SP6-BS73]
gi|147930339|gb|EDK81323.1| hypothetical protein CGSSp23BS72_00390 [Streptococcus pneumoniae
SP23-BS72]
Length = 234
Score = 293 bits (750), Expect = 3e-78, Method: Composition-based stats.
Identities = 164/177 (92%), Positives = 169/177 (95%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
LILL GWY VNHMPLSESLPFYHCRMAMFVVLLLPGQSKY+QYFALLGTFGTLAAFVYPV
Sbjct: 58 LILLYGWYWVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYKQYFALLGTFGTLAAFVYPV 117
Query: 61 SDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 120
DAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV
Sbjct: 118 PDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 177
Query: 121 TGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELFLEQEAEKMIAKKA 177
TGGDYGFLTKPPLVGDHGLVANYL+VS+ L A I+LTKKILE FL QEAEKMIAK+A
Sbjct: 178 TGGDYGFLTKPPLVGDHGLVANYLLVSIVLVATISLTKKILEFFLAQEAEKMIAKEA 234
>gi|15903555|ref|NP_359105.1| hypothetical protein spr1512 [Streptococcus pneumoniae R6]
gi|116515691|ref|YP_816937.1| hypothetical protein SPD_1481 [Streptococcus pneumoniae D39]
gi|15459174|gb|AAL00316.1| Hypothetical protein [Streptococcus pneumoniae R6]
gi|116076267|gb|ABJ53987.1| membrane protein, putative [Streptococcus pneumoniae D39]
Length = 234
Score = 293 bits (750), Expect = 3e-78, Method: Composition-based stats.
Identities = 164/177 (92%), Positives = 169/177 (95%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
LILL GWY VNHMPLSESLPFYHCRMAMFVVLLLPGQSKY+QYFALLGTFGTLAAFVYPV
Sbjct: 58 LILLYGWYWVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYKQYFALLGTFGTLAAFVYPV 117
Query: 61 SDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 120
DAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV
Sbjct: 118 PDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 177
Query: 121 TGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELFLEQEAEKMIAKKA 177
TGGDYGFLTKPPLVGDHGLVANYL+VS+ L A I+LTKKILE FL QEAEKMIAK+A
Sbjct: 178 TGGDYGFLTKPPLVGDHGLVANYLLVSIVLVATISLTKKILEFFLAQEAEKMIAKEA 234
>gi|148993760|ref|ZP_01823187.1| hypothetical protein CGSSp9BS68_02523 [Streptococcus pneumoniae
SP9-BS68]
gi|147927716|gb|EDK78740.1| hypothetical protein CGSSp9BS68_02523 [Streptococcus pneumoniae
SP9-BS68]
Length = 234
Score = 293 bits (749), Expect = 4e-78, Method: Composition-based stats.
Identities = 163/177 (92%), Positives = 169/177 (95%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
LILL GWY VNHMPLSESLPFYHCRMAMFVVLLLPGQSKY+QYFALLGTFGTLAAFVYPV
Sbjct: 58 LILLYGWYWVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYKQYFALLGTFGTLAAFVYPV 117
Query: 61 SDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 120
DAYPFPH+TILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV
Sbjct: 118 PDAYPFPHVTILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 177
Query: 121 TGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELFLEQEAEKMIAKKA 177
TGGDYGFLTKPPLVGDHGLVANYL+VS+ L A I+LTKKILE FL QEAEKMIAK+A
Sbjct: 178 TGGDYGFLTKPPLVGDHGLVANYLLVSIVLVATISLTKKILEFFLAQEAEKMIAKEA 234
>gi|148997719|ref|ZP_01825283.1| hypothetical protein CGSSp11BS70_02389 [Streptococcus pneumoniae
SP11-BS70]
gi|4009468|gb|AAC95438.1| unknown [Streptococcus pneumoniae]
gi|147756218|gb|EDK63260.1| hypothetical protein CGSSp11BS70_02389 [Streptococcus pneumoniae
SP11-BS70]
Length = 234
Score = 291 bits (746), Expect = 9e-78, Method: Composition-based stats.
Identities = 163/177 (92%), Positives = 168/177 (94%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
LILL GWY VNHMPLSESLPFYHCRMAMFVVLLLPGQSKY+QYFALLGTFGTLAAFVYPV
Sbjct: 58 LILLYGWYWVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYKQYFALLGTFGTLAAFVYPV 117
Query: 61 SDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 120
DAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV
Sbjct: 118 PDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 177
Query: 121 TGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELFLEQEAEKMIAKKA 177
TGGDYGFLTKPPLVGDHGLVANYL+VS+ L A I+LTKKILE FL QEAEKMI K+A
Sbjct: 178 TGGDYGFLTKPPLVGDHGLVANYLLVSIVLVATISLTKKILEFFLAQEAEKMIVKEA 234
>gi|148984105|ref|ZP_01817400.1| hypothetical protein CGSSp3BS71_02752 [Streptococcus pneumoniae
SP3-BS71]
gi|147923394|gb|EDK74507.1| hypothetical protein CGSSp3BS71_02752 [Streptococcus pneumoniae
SP3-BS71]
Length = 234
Score = 291 bits (745), Expect = 1e-77, Method: Composition-based stats.
Identities = 163/177 (92%), Positives = 168/177 (94%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
LILL GWY VNHMPLSESLPFYHCRMAMFVVLLLPGQSKY+QYFALLG FGTLAAFVYPV
Sbjct: 58 LILLYGWYWVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYKQYFALLGIFGTLAAFVYPV 117
Query: 61 SDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 120
DAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV
Sbjct: 118 PDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 177
Query: 121 TGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELFLEQEAEKMIAKKA 177
TGGDYGFLTKPPLVGDHGLVANYL+VS+ L A I+LTKKILE FL QEAEKMIAK+A
Sbjct: 178 TGGDYGFLTKPPLVGDHGLVANYLLVSIVLVATISLTKKILEFFLAQEAEKMIAKEA 234
>gi|149006737|ref|ZP_01830423.1| hypothetical protein CGSSp18BS74_05747 [Streptococcus pneumoniae
SP18-BS74]
gi|147761652|gb|EDK68616.1| hypothetical protein CGSSp18BS74_05747 [Streptococcus pneumoniae
SP18-BS74]
Length = 165
Score = 270 bits (690), Expect = 3e-71, Method: Composition-based stats.
Identities = 154/165 (93%), Positives = 159/165 (96%)
Query: 13 MPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPVSDAYPFPHITIL 72
MPLSESLPFYHCRMAMFVVLLLPGQSKY+QYFALLGTFGTLAAFVYPV DAYPFPHITIL
Sbjct: 1 MPLSESLPFYHCRMAMFVVLLLPGQSKYKQYFALLGTFGTLAAFVYPVPDAYPFPHITIL 60
Query: 73 SFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLVTGGDYGFLTKPP 132
SFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLVTGGDYGFLTKPP
Sbjct: 61 SFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLVTGGDYGFLTKPP 120
Query: 133 LVGDHGLVANYLIVSLALSAAITLTKKILELFLEQEAEKMIAKKA 177
LVGDHGLVANYL+VS+ L A I+LTKKILE FL QEAEKMIAK+A
Sbjct: 121 LVGDHGLVANYLLVSIVLVATISLTKKILEFFLAQEAEKMIAKEA 165
>gi|157074593|gb|ABV09276.1| putative membrane protein [Streptococcus gordonii str. Challis
substr. CH1]
Length = 234
Score = 182 bits (461), Expect = 1e-44, Method: Composition-based stats.
Identities = 92/176 (52%), Positives = 128/176 (72%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
L+LL GWY PL+ESLPFYHCR+AMF VLLLP ++ Y+QYFALLG FG + A ++P+
Sbjct: 55 LVLLYGWYMATQAPLTESLPFYHCRIAMFAVLLLPRRTSYKQYFALLGVFGPICALLHPI 114
Query: 61 SDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 120
D YP PHIT+ S++ GHLALLGNS+VYL+ +Y+ ++L + I +TF +NA+IF+VN +
Sbjct: 115 FDPYPLPHITLFSYLVGHLALLGNSIVYLMNEYDYKILSNRRIIEITFGMNAVIFLVNQL 174
Query: 121 TGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELFLEQEAEKMIAKK 176
TGGDYGFL PPLVGD+G++ N+L+VS L A+ + + E + +M+ K
Sbjct: 175 TGGDYGFLKNPPLVGDYGMLGNFLLVSSVLVVALCGFSLLFKRLKEAQENRMLLLK 230
>gi|125717548|ref|YP_001034681.1| hypothetical protein SSA_0695 [Streptococcus sanguinis SK36]
gi|125497465|gb|ABN44131.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 228
Score = 181 bits (458), Expect = 2e-44, Method: Composition-based stats.
Identities = 95/162 (58%), Positives = 120/162 (74%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
LI L WY + PLSESLPFYHCRMAMF ++ LP +S Y+ YFALLGTFG++ AF+YP+
Sbjct: 56 LIGLYSWYMLTAAPLSESLPFYHCRMAMFALMFLPNRSVYKFYFALLGTFGSIVAFIYPI 115
Query: 61 SDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 120
D YPFPHITILSFI GHLALLGN L+YL R Y+ + + + TF +N + V+N++
Sbjct: 116 FDPYPFPHITILSFIIGHLALLGNCLIYLFRYYHTFSMSWQRVVWTTFLMNVFLLVINML 175
Query: 121 TGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILE 162
T G YGFLT PPLVG+HGL+ NYL+VS+ LSAA+ L I +
Sbjct: 176 TKGSYGFLTDPPLVGNHGLLLNYLLVSIVLSAAVCLVSDIFK 217
>gi|24379084|ref|NP_721039.1| hypothetical protein SMU.607 [Streptococcus mutans UA159]
gi|24376983|gb|AAN58345.1|AE014904_8 conserved hypothetical protein [Streptococcus mutans UA159]
Length = 227
Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats.
Identities = 76/156 (48%), Positives = 103/156 (66%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
L+ L WYG +P+S SLPFYHCR+AMF +LLLP ++K +QYFAL+G G + A YP+
Sbjct: 55 LLSLYIWYGAKMIPISNSLPFYHCRLAMFALLLLPDKTKLKQYFALMGVSGAIFAIGYPI 114
Query: 61 SDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 120
DAY FPHIT SF+ GH ALL S++YL+R Y + L K I L TF LN + ++N +
Sbjct: 115 MDAYTFPHITAFSFLIGHYALLVGSIIYLMRYYKSNFLSWKAIILYTFVLNLFLVIINYL 174
Query: 121 TGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITL 156
TGG+YG L P + + L+ YL V+ L+A + L
Sbjct: 175 TGGNYGILRYTPFITNTPLLVRYLAVTFILTAMLLL 210
>gi|125717549|ref|YP_001034682.1| hypothetical protein SSA_0696 [Streptococcus sanguinis SK36]
gi|125497466|gb|ABN44132.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 228
Score = 139 bits (351), Expect = 5e-32, Method: Composition-based stats.
Identities = 79/156 (50%), Positives = 99/156 (63%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
L++L WY +P S SLPFYHCR+AMF V+ LP + + +QYFALLG G + A YPV
Sbjct: 55 LLMLYSWYFGFRIPFSNSLPFYHCRLAMFAVVFLPDKWRSKQYFALLGASGAVFALGYPV 114
Query: 61 SDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 120
D Y FPHIT SF+ GH ALL NSL+YL+ Y+ LL I TF LN + VN V
Sbjct: 115 FDPYDFPHITSFSFLIGHYALLVNSLIYLMNHYDKSLLKKYMIVAYTFGLNLFLVGVNQV 174
Query: 121 TGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITL 156
TGG+YG L PP + + L YL+VS+ LS A+ L
Sbjct: 175 TGGNYGLLKSPPFIPNAPLWIKYLLVSVILSLALVL 210
>gi|157076434|gb|ABV11117.1| membrane protein, putative [Streptococcus gordonii str. Challis
substr. CH1]
Length = 231
Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats.
Identities = 74/147 (50%), Positives = 92/147 (62%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
L+ L WY +PL+ SLP YHCR+AMF ++ LP + K +QYFALLG G + A YPV
Sbjct: 55 LLALYAWYIGFRLPLANSLPLYHCRLAMFAMIFLPDKWKIKQYFALLGASGAIFALGYPV 114
Query: 61 SDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 120
D Y FPHIT SF+ GH ALL NSL+YL Y+ RLL I T LN + VN V
Sbjct: 115 FDPYDFPHITSFSFLIGHYALLVNSLIYLFNHYDKRLLKKVEIIAYTLMLNLFLIGVNQV 174
Query: 121 TGGDYGFLTKPPLVGDHGLVANYLIVS 147
TGG+YG L +PP + L+ NY +VS
Sbjct: 175 TGGNYGLLARPPFISGENLLINYSLVS 201
>gi|146319003|ref|YP_001198715.1| Permease of the major facilitator superfamily [Streptococcus suis
05ZYH33]
gi|146321211|ref|YP_001200922.1| Permease of the major facilitator superfamily [Streptococcus suis
98HAH33]
gi|145689809|gb|ABP90315.1| Permease of the major facilitator superfamily [Streptococcus suis
05ZYH33]
gi|145692017|gb|ABP92522.1| Permease of the major facilitator superfamily [Streptococcus suis
98HAH33]
Length = 252
Score = 132 bits (333), Expect = 6e-30, Method: Composition-based stats.
Identities = 76/173 (43%), Positives = 110/173 (63%), Gaps = 3/173 (1%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAM-FVVLLLPGQSKYRQYFALLGTFGTLAAFVYP 59
++ L WY V PLSESLPFYHCR+AM F++ PG K +YFA LG FG+LAAF++P
Sbjct: 75 IVSLYTWYIVADSPLSESLPFYHCRLAMLFILWAKPGPLK--RYFAYLGLFGSLAAFIHP 132
Query: 60 VSDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNL 119
V D + FPH+T +F+ GH AL N ++YLL +L K + T +N LI V L
Sbjct: 133 VFDPFAFPHLTFFTFVIGHYALTVNCMLYLLSDLEGEMLKGKEVVKYTLIMNMLILGVAL 192
Query: 120 VTGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELFLEQEAEKM 172
+TGG+YGFL + PLV + L N+ +V+ L +I + +L +L++E+++M
Sbjct: 193 LTGGNYGFLRQAPLVNTNNLPLNFFLVTCLLCFSILSIQAMLIAYLKKESKQM 245
>gi|81096713|ref|ZP_00875047.1| similar to unknown proteins [Streptococcus suis 89/1591]
gi|80977232|gb|EAP40781.1| similar to unknown proteins [Streptococcus suis 89/1591]
Length = 232
Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats.
Identities = 76/173 (43%), Positives = 110/173 (63%), Gaps = 3/173 (1%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAM-FVVLLLPGQSKYRQYFALLGTFGTLAAFVYP 59
++ L WY V PLSESLPFYHCR+AM F++ PG K +YFA LG FG+LAAF++P
Sbjct: 55 IVSLYTWYIVADSPLSESLPFYHCRLAMLFILWAKPGPLK--RYFAYLGLFGSLAAFIHP 112
Query: 60 VSDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNL 119
V D + FPH+T +F+ GH AL N ++YLL +L K + T +N LI V L
Sbjct: 113 VFDPFAFPHLTFFTFVIGHYALTVNCMLYLLSDLEGEMLKGKEVVKYTLIMNMLILGVAL 172
Query: 120 VTGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELFLEQEAEKM 172
+TGG+YGFL + PLV + L N+ +V+ L +I + +L +L++E+++M
Sbjct: 173 LTGGNYGFLRQAPLVNTNNLPLNFFLVTCLLCFSILSVQAMLIAYLKKESKQM 225
>gi|55821551|ref|YP_139993.1| Conserved hypothetical, predicted membrane protein (TMS7)
[Streptococcus thermophilus LMG 18311]
gi|55823479|ref|YP_141920.1| hypothetical protein str1575 [Streptococcus thermophilus CNRZ1066]
gi|55737536|gb|AAV61178.1| Conserved hypothetical, predicted membrane protein (TMS7)
[Streptococcus thermophilus LMG 18311]
gi|55739464|gb|AAV63105.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
Length = 221
Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats.
Identities = 75/164 (45%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
L L WY PL SLP YHCRMAMF VLLL S+ + YFA++G GT A +YPV
Sbjct: 55 LFALYTWYLWQGFPLFISLPLYHCRMAMFAVLLLK-NSRTKTYFAIMGVVGTYCALIYPV 113
Query: 61 SDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 120
D Y FPHIT SF+ GH ALL NSL + Y + + I + TF LN + +VN
Sbjct: 114 FDPYEFPHITGFSFLIGHYALLVNSLNVIFNSYKTHPISLGMIVVATFLLNLGLVIVNQT 173
Query: 121 TGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELF 164
GG+YG L P + LV YL VS L + + KK LE F
Sbjct: 174 IGGNYGMLKHTPFIMGPSLVVKYLAVSATLIILMIIMKKSLEYF 217
>gi|116628262|ref|YP_820881.1| hypothetical protein STER_1533 [Streptococcus thermophilus LMD-9]
gi|116101539|gb|ABJ66685.1| Uncharacterized conserved protein [Streptococcus thermophilus
LMD-9]
Length = 221
Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats.
Identities = 75/164 (45%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
L L WY PL SLP YHCRMAMF VLLL S+ + YFA++G GT A +YPV
Sbjct: 55 LFALYTWYLWQGFPLFISLPLYHCRMAMFAVLLLK-NSRTKTYFAIMGVVGTYCALIYPV 113
Query: 61 SDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 120
D Y FPHIT SF+ GH ALL NSL + Y + + I + TF LN + +VN
Sbjct: 114 FDPYEFPHITGFSFLIGHYALLVNSLNVIFNSYKTHPISLGLIVVATFLLNLGLVIVNQT 173
Query: 121 TGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELF 164
GG+YG L P + LV YL VS L + + KK LE F
Sbjct: 174 IGGNYGMLKHTPFIMGPSLVVKYLAVSATLIILMIIMKKSLEYF 217
>gi|15675336|ref|NP_269510.1| hypothetical protein SPy_1419 [Streptococcus pyogenes M1 GAS]
gi|13622517|gb|AAK34231.1| hypothetical protein SPy_1419 [Streptococcus pyogenes M1 GAS]
Length = 231
Score = 104 bits (260), Expect = 2e-21, Method: Composition-based stats.
Identities = 64/160 (40%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
+I L WY + PL E+LP YHCR+AM + LP ++K++Q F +LG GT A + P
Sbjct: 54 VIGLYTWYVLRGFPLDEALPLYHCRIAMLAIFFLPDRNKFKQLFMVLGIGGTFLALLSP- 112
Query: 61 SDAYPFP--HITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVN 118
D YPF H+ +SF FGH ALL N L+YLLR Y+A L + + +N L+ +V+
Sbjct: 113 -DLYPFRLWHVANVSFYFGHYALLVNGLIYLLRFYDASQLRLLSVVRYLATVNFLLLLVS 171
Query: 119 LVTGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTK 158
L T G+YGF+ P++ L+ N++IV+ L+ + +T+
Sbjct: 172 LATKGNYGFVMDIPVIHTRHLLLNFVIVTSGLTFMVKITE 211
>gi|77406744|ref|ZP_00783781.1| membrane protein, putative [Streptococcus agalactiae H36B]
gi|77174649|gb|EAO77481.1| membrane protein, putative [Streptococcus agalactiae H36B]
Length = 228
Score = 103 bits (257), Expect = 4e-21, Method: Composition-based stats.
Identities = 69/163 (42%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLL-PGQSKYRQYFALLGTFGTLAAFVYP 59
LI + W+ +PLSESLP YHCR+ MFVVLL PG K YFALLG G + A ++P
Sbjct: 55 LITIYTWFFWAKLPLSESLPLYHCRIGMFVVLLARPGILK--DYFALLGVVGGVLAMIHP 112
Query: 60 VSDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNL 119
Y F H+T + F GH AL SL++L+ Q N L+ K I +T +N + +NL
Sbjct: 113 DFYPYQFLHVTNIFFFIGHFALFVLSLLHLMTQSNLDKLNPKLIIQLTLLINMSLIFINL 172
Query: 120 VTGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILE 162
+TGG+YGF+ K P++G N IV+ LS + K+I +
Sbjct: 173 LTGGNYGFMMKTPILGITNPFLNLFIVTTLLSFLVLFVKQIFQ 215
>gi|77409087|ref|ZP_00785803.1| membrane protein, putative [Streptococcus agalactiae COH1]
gi|77172304|gb|EAO75457.1| membrane protein, putative [Streptococcus agalactiae COH1]
Length = 228
Score = 103 bits (257), Expect = 4e-21, Method: Composition-based stats.
Identities = 67/162 (41%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
LI + W+ +PLSESLP YHCR+ MFVVLL + + YFALLG G + A ++P
Sbjct: 55 LITIYTWFFWAKLPLSESLPLYHCRIGMFVVLLARPRI-LKDYFALLGVVGGVLAMIHPD 113
Query: 61 SDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLV 120
Y F H+T + F GH AL SL++L+ Q N L+ K I +T +N + +NL+
Sbjct: 114 FYPYQFLHVTNIFFFIGHFALFVLSLLHLMTQSNLDKLNPKLIIQLTLLINMSLIFINLL 173
Query: 121 TGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILE 162
TGG+YGF+ K P++G N LIV+ LS + K+I +
Sbjct: 174 TGGNYGFMMKTPILGITNPFLNLLIVTTLLSFLVLFVKQIFQ 215
>gi|22536934|ref|NP_687785.1| hypothetical protein SAG0770 [Streptococcus agalactiae 2603V/R]
gi|25010845|ref|NP_735240.1| hypothetical protein gbs0790 [Streptococcus agalactiae NEM316]
gi|76788300|ref|YP_329517.1| conserved hypothetical integral membrane protein TIGR02206
[Streptococcus agalactiae A909]
gi|77412468|ref|ZP_00788771.1| membrane protein, putative [Streptococcus agalactiae CJB111]
gi|22533787|gb|AAM99657.1|AE014227_1 membrane protein, putative [Streptococcus agalactiae 2603V/R]
gi|23095224|emb|CAD46434.1| Unknown [Streptococcus agalactiae NEM316]
gi|76563357|gb|ABA45941.1| conserved hypothetical integral membrane protein TIGR02206
[Streptococcus agalactiae A909]
gi|77161486|gb|EAO72494.1| membrane protein, putative [Streptococcus agalactiae CJB111]
Length = 228
Score = 103 bits (256), Expect = 6e-21, Method: Composition-based stats.
Identities = 69/163 (42%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLL-PGQSKYRQYFALLGTFGTLAAFVYP 59
LI + W+ +PLSESLP YHCR+ MFVVLL PG K YFALLG G + A ++P
Sbjct: 55 LITIYTWFFWAKLPLSESLPLYHCRIGMFVVLLARPGILK--DYFALLGVVGGVLAMIHP 112
Query: 60 VSDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNL 119
Y F H+T + F GH AL SL++L+ Q N L+ K I +T +N + +NL
Sbjct: 113 DFYPYQFLHVTNIFFFIGHFALFVLSLLHLMTQSNLDKLNPKLIIQLTLLINMSLIFINL 172
Query: 120 VTGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILE 162
+TGG+YGF+ K P++G N IV+ LS + K+I +
Sbjct: 173 LTGGNYGFMMKTPILGITNPFLNLFIVTTLLSFLVLFVKQIFQ 215
>gi|94994660|ref|YP_602758.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS10750]
gi|94548168|gb|ABF38214.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS10750]
Length = 231
Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats.
Identities = 65/170 (38%), Positives = 99/170 (58%), Gaps = 4/170 (2%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
+I L WY + PL E+LP YHCR+AM + LP ++K++Q F +LG GT A + P
Sbjct: 54 VIGLYTWYVLRGFPLDEALPLYHCRIAMLAIFFLPDRNKFKQLFMVLGIGGTFLALLSP- 112
Query: 61 SDAYPFP--HITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVN 118
D YPF H+ +SF GH ALL N L+YLLR Y+A L + + +N L+ +V+
Sbjct: 113 -DLYPFRLWHVANVSFYLGHYALLVNGLIYLLRFYDASQLRLLSVVRYLATINFLLLLVS 171
Query: 119 LVTGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELFLEQE 168
L T G+YGF+ P++ L+ N++IV+ L+ + +T+ F E +
Sbjct: 172 LATKGNYGFVMDIPVIHTRHLLLNFVIVTSGLTFMVKITEYFYLKFGEAQ 221
>gi|19746378|ref|NP_607514.1| hypothetical protein spyM18_1428 [Streptococcus pyogenes MGAS8232]
gi|50914529|ref|YP_060501.1| Hypothetical Membrane Spanning Protein [Streptococcus pyogenes
MGAS10394]
gi|71903812|ref|YP_280615.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS6180]
gi|94990736|ref|YP_598836.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS10270]
gi|139473557|ref|YP_001128273.1| hypothetical protein SpyM50704 [Streptococcus pyogenes str.
Manfredo]
gi|19748576|gb|AAL98013.1| hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|50903603|gb|AAT87318.1| Hypothetical Membrane Spanning Protein [Streptococcus pyogenes
MGAS10394]
gi|71802907|gb|AAX72260.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS6180]
gi|94544244|gb|ABF34292.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS10270]
gi|134271804|emb|CAM30037.1| putative membrane protein [Streptococcus pyogenes str. Manfredo]
Length = 231
Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats.
Identities = 65/170 (38%), Positives = 99/170 (58%), Gaps = 4/170 (2%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
+I L WY + PL E+LP YHCR+AM + LP ++K++Q F +LG GT A + P
Sbjct: 54 VIGLYTWYVLRGFPLDEALPLYHCRIAMLAIFFLPDRNKFKQLFMVLGIGGTFLALLSP- 112
Query: 61 SDAYPFP--HITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVN 118
D YPF H+ +SF GH ALL N L+YLLR Y+A L + + +N L+ +V+
Sbjct: 113 -DLYPFRLWHVANVSFYLGHYALLVNGLIYLLRFYDASQLRLLSVVRYLATVNFLLLLVS 171
Query: 119 LVTGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELFLEQE 168
L T G+YGF+ P++ L+ N++IV+ L+ + +T+ F E +
Sbjct: 172 LATKGNYGFVMDIPVIHTRHLLLNFVIVTSGLTFMVKITEYFYLKFGEAQ 221
>gi|71910969|ref|YP_282519.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS5005]
gi|71853751|gb|AAZ51774.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS5005]
Length = 231
Score = 102 bits (253), Expect = 1e-20, Method: Composition-based stats.
Identities = 64/160 (40%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
+I L WY + PL E+LP YHCR+AM + LP ++K++Q F +LG GT A + P
Sbjct: 54 VIGLYTWYVLRGFPLDEALPLYHCRIAMLAIFFLPDRNKFKQLFMVLGIGGTFLALLSP- 112
Query: 61 SDAYPFP--HITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVN 118
D YPF H+ +SF FGH ALL N L+YLLR Y+A L + + +N L+ +V+
Sbjct: 113 -DLYPFRLWHVANVSFYFGHYALLVNGLIYLLRFYDASQLRLLSVVRYLATVNFLLLLVS 171
Query: 119 LVTGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTK 158
L T G+YGF+ P++ L+ N++IV+ L+ + +T+
Sbjct: 172 LATKGNYGFVMDIPVIHTRHLLLNFVIVTSGLTFMVKITE 211
>gi|21910618|ref|NP_664886.1| hypothetical protein SpyM3_1082 [Streptococcus pyogenes MGAS315]
gi|21904820|gb|AAM79689.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
Length = 231
Score = 102 bits (253), Expect = 1e-20, Method: Composition-based stats.
Identities = 65/170 (38%), Positives = 99/170 (58%), Gaps = 4/170 (2%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
+I L WY + PL E+LP YHCR+AM + LP ++K++Q F +LG GT A + P
Sbjct: 54 VIGLYTWYVLRGFPLDEALPLYHCRIAMLAIFFLPDRNKFKQLFMVLGIGGTFLALLSP- 112
Query: 61 SDAYPFP--HITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVN 118
D YPF H+ +SF GH ALL N L+YLLR Y+A L + + +N L+ +V+
Sbjct: 113 -DLYPFRLWHVANVSFYLGHYALLVNGLIYLLRFYDASQLRLLSVVRYLATVNFLLLLVS 171
Query: 119 LVTGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELFLEQE 168
L T G+YGF+ P++ L+ N++IV+ L+ + +T+ F E +
Sbjct: 172 LATKGNYGFVMDIPVIHTRHLLFNFVIVTSGLTFMVKITEYFYLKFGEAQ 221
>gi|28895694|ref|NP_802044.1| hypothetical protein SPs0782 [Streptococcus pyogenes SSI-1]
gi|28810943|dbj|BAC63877.1| hypothetical protein [Streptococcus pyogenes SSI-1]
Length = 233
Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats.
Identities = 65/170 (38%), Positives = 99/170 (58%), Gaps = 4/170 (2%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
+I L WY + PL E+LP YHCR+AM + LP ++K++Q F +LG GT A + P
Sbjct: 56 VIGLYTWYVLRGFPLDEALPLYHCRIAMLAIFFLPDRNKFKQLFMVLGIGGTFLALLSP- 114
Query: 61 SDAYPFP--HITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVN 118
D YPF H+ +SF GH ALL N L+YLLR Y+A L + + +N L+ +V+
Sbjct: 115 -DLYPFRLWHVANVSFYLGHYALLVNGLIYLLRFYDASQLRLLSVVRYLATVNFLLLLVS 173
Query: 119 LVTGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELFLEQE 168
L T G+YGF+ P++ L+ N++IV+ L+ + +T+ F E +
Sbjct: 174 LATKGNYGFVMDIPVIHTRHLLFNFVIVTSGLTFMVKITEYFYLKFGEAQ 223
>gi|94988833|ref|YP_596934.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS9429]
gi|94992724|ref|YP_600823.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS2096]
gi|94542341|gb|ABF32390.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS9429]
gi|94546232|gb|ABF36279.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS2096]
Length = 231
Score = 99.8 bits (247), Expect = 5e-20, Method: Composition-based stats.
Identities = 64/170 (37%), Positives = 98/170 (57%), Gaps = 4/170 (2%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYRQYFALLGTFGTLAAFVYPV 60
+I L WY + PL E+LP YHCR+AM + LP ++K++Q +LG GT A + P
Sbjct: 54 VIGLYTWYVLRGFPLDEALPLYHCRIAMLAIFFLPDRNKFKQLCMVLGIGGTFLALLSP- 112
Query: 61 SDAYPFP--HITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVN 118
D YPF H+ +SF GH ALL N L+YLLR Y+A L + + +N L+ +V+
Sbjct: 113 -DLYPFRLWHVANVSFYLGHYALLVNGLIYLLRFYDASQLRLLSVVRYLATVNFLLLLVS 171
Query: 119 LVTGGDYGFLTKPPLVGDHGLVANYLIVSLALSAAITLTKKILELFLEQE 168
L T G+YGF+ P++ L+ N++IV+ L+ + +T+ F E +
Sbjct: 172 LATKGNYGFVMDIPVIHTRHLLLNFVIVTSGLTFMVKITEYFYLKFGEAQ 221
>gi|76800039|ref|ZP_00781961.1| membrane protein, putative [Streptococcus agalactiae 18RS21]
gi|76584644|gb|EAO61444.1| membrane protein, putative [Streptococcus agalactiae 18RS21]
Length = 208
Score = 97.8 bits (242), Expect = 3e-19, Method: Composition-based stats.
Identities = 67/152 (44%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLL-PGQSKYRQYFALLGTFGTLAAFVYP 59
LI + W+ +PLSESLP YHCR+ MFVVLL PG K YFALLG G + A ++P
Sbjct: 55 LITIYTWFFWAKLPLSESLPLYHCRIGMFVVLLARPGILK--DYFALLGVVGGVLAMIHP 112
Query: 60 VSDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNL 119
Y F H+T + F GH AL SL++L+ Q N L+ K I +T +N + +NL
Sbjct: 113 DFYPYQFLHVTNIFFFIGHFALFVLSLLHLMTQSNLDKLNPKLIIQLTLLINMSLIFINL 172
Query: 120 VTGGDYGFLTKPPLVGDHGLVANYLIVSLALS 151
+TGG+YGF+ K P++G N IV+ LS
Sbjct: 173 LTGGNYGFMMKTPILGITNPFLNLFIVTTLLS 204
>gi|77414682|ref|ZP_00790816.1| putative membrane protein [Streptococcus agalactiae 515]
gi|77159260|gb|EAO70437.1| putative membrane protein [Streptococcus agalactiae 515]
Length = 168
Score = 72.4 bits (176), Expect = 1e-11, Method: Composition-based stats.
Identities = 51/112 (45%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Query: 1 LILLMGWYGVNHMPLSESLPFYHCRMAMFVVLLL-PGQSKYRQYFALLGTFGTLAAFVYP 59
LI + W+ +PLSESLP YHCR+ MFVVLL PG K YFALLG G + A ++P
Sbjct: 55 LITIYTWFFWAKLPLSESLPLYHCRIGMFVVLLARPGILK--DYFALLGVVGGVLAMIHP 112
Query: 60 VSDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALN 111
Y F H+T + F GH AL SL++L+ Q N L+ K I +T N
Sbjct: 113 DFYPYQFLHVTNIFFFIGHFALFVLSLLHLMTQSNLDKLNPKLIIQLTLLNN 164
>gi|110801667|ref|YP_698137.1| hypothetical protein CPR_0812 [Clostridium perfringens SM101]
gi|110682168|gb|ABG85538.1| membrane protein, putative [Clostridium perfringens SM101]
Length = 284
Score = 63.9 bits (154), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 2 ILLMGWYG-VNHMPLSESLPFYHCRMA--MFVVLLLPGQSKYRQYFALL-GTFGTLAAFV 57
I L WY + L ESLP Y CR+A M + L+ ++ + + A GT G + A +
Sbjct: 95 IFLAIWYSRFPNFYLKESLPLYPCRIAIIMAAIGLIWKKNDFAKSIAYFWGTIGAIGALM 154
Query: 58 YPVSDAYPFPHITILSFIFGHLALLGNSL-VYLLRQYNARLLDVKGIFLMTFALNALIFV 116
P++++Y FPHIT +F GH LL SL + L+ ++ + +VK + +F FV
Sbjct: 155 IPITNSYIFPHITYYTFFIGHYFLLIASLYLILIEEFKVKSENVKQALIFSFIFAICAFV 214
Query: 117 VNLVTGGDYGFLTKP 131
N + +Y FL P
Sbjct: 215 ANYLFDANYAFLNPP 229
>gi|18309810|ref|NP_561744.1| hypothetical protein CPE0828 [Clostridium perfringens str. 13]
gi|18144488|dbj|BAB80534.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 260
Score = 63.5 bits (153), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 2 ILLMGWYG-VNHMPLSESLPFYHCRMA--MFVVLLLPGQSKYRQYFALL-GTFGTLAAFV 57
I L WY + L ESLP Y CR+A M + L+ ++ + + A GT G + A +
Sbjct: 71 IFLAIWYSRFPNFYLKESLPLYPCRIAIIMAAIGLIWKKNDFAKSIAYFWGTIGAIGALM 130
Query: 58 YPVSDAYPFPHITILSFIFGHLALLGNSL-VYLLRQYNARLLDVKGIFLMTFALNALIFV 116
P++++Y FPHIT +F GH LL SL + L+ ++ + +VK + +F F+
Sbjct: 131 IPITNSYIFPHITYYTFFIGHYFLLIASLYLILIEEFKVKSKNVKQALIFSFIFAICAFI 190
Query: 117 VNLVTGGDYGFLTKP 131
N + +Y FL P
Sbjct: 191 ANYLFDANYAFLNPP 205
>gi|110799294|ref|YP_695275.1| hypothetical protein CPF_0824 [Clostridium perfringens ATCC 13124]
gi|110673941|gb|ABG82928.1| putative membrane protein [Clostridium perfringens ATCC 13124]
Length = 260
Score = 63.5 bits (153), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 2 ILLMGWYG-VNHMPLSESLPFYHCRMA--MFVVLLLPGQSKYRQYFALL-GTFGTLAAFV 57
I L WY + L ESLP Y CR+A M + L+ ++ + + A GT G + A +
Sbjct: 71 IFLAIWYSRFPNFYLKESLPLYPCRIAIIMAAIGLIWKKNDFAKSIAYFWGTIGAIGALM 130
Query: 58 YPVSDAYPFPHITILSFIFGHLALLGNSL-VYLLRQYNARLLDVKGIFLMTFALNALIFV 116
P++++Y FPHIT +F GH LL SL + L+ ++ + +VK + +F F+
Sbjct: 131 IPITNSYIFPHITYYTFFIGHYFLLIASLYLILIEEFKVKSKNVKQALIFSFIFAICAFI 190
Query: 117 VNLVTGGDYGFLTKP 131
N + +Y FL P
Sbjct: 191 ANYLFDANYAFLNPP 205
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.330 0.145 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 618,665,011
Number of Sequences: 5470121
Number of extensions: 24116790
Number of successful extensions: 71709
Number of sequences better than 1.0e-05: 34
Number of HSP's better than 0.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 71664
Number of HSP's gapped (non-prelim): 35
length of query: 177
length of database: 1,894,087,724
effective HSP length: 124
effective length of query: 53
effective length of database: 1,215,792,720
effective search space: 64437014160
effective search space used: 64437014160
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 125 (52.8 bits)