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Protease (prosome, macropain) 26S subunit, ATPase 1, mRNA (cDNA clone MGC:6597 IMAGE:3486436) (Psmc1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
| Reference Protein | Species | Id(%) | Len(aa) |
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NP_032973.1 |
protease (prosome, macropain) 26S subunit, ATPase 1 |
M. musculus |
100.0 |
439 |
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NP_476464.1 |
protease (prosome, macropain) 26S subunit, ATPase 1 |
R. norvegicus |
100.0 |
439 |
|
NP_001080548.1 |
protease (prosome, macropain) 26S subunit, ATPase 1 |
X. laevis |
100.0 |
439 |
|
NP_001039154.1 |
proteasome (prosome, macropain) 26S subunit, ATPase, 1 |
X. tropicalis |
100.0 |
439 |
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XP_001103312.1 |
PREDICTED: similar to peptidase (prosome, macropain) 26S subunit, ATPase 1 |
M. mulatta |
100.0 |
439 |
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XP_510114.2 |
PREDICTED: similar to P26s4 isoform 3 |
P. troglodytes |
100.0 |
439 |
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NP_002793.2 |
proteasome 26S ATPase subunit 1 |
H. sapiens |
100.0 |
439 |
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XP_001494140.2 |
PREDICTED: proteasome (prosome, macropain) 26S subunit, ATPase, 1 |
E. caballus |
100.0 |
439 |
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XP_001928020.1 |
PREDICTED: proteasome (prosome, macropain) 26S subunit, ATPase, 1 |
S. scrofa |
100.0 |
439 |
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NP_001014855.1 |
proteasome 26S ATPase subunit 1 |
B. taurus |
100.0 |
439 |
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XP_001517805.1 |
PREDICTED: similar to P26s4, partial |
O. anatinus |
100.0 |
387 |
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XP_001371702.1 |
PREDICTED: similar to P26s4 |
M. domestica |
99.5 |
448 |
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NP_990289.1 |
proteasome (prosome, macropain) 26S subunit, ATPase, 1 |
G. gallus |
99.5 |
439 |
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NP_001002091.1 |
proteasome (prosome, macropain) 26S subunit, ATPase, 1b |
D. rerio |
99.3 |
439 |
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NP_524469.2 |
Proteasome 26S subunit subunit 4 ATPase CG5289-PA |
D. melanogaster |
96.4 |
438 |
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NP_504558.1 |
proteasome Regulatory Particle, ATPase-like family member (rpt-2) |
C. elegans |
90.5 |
442 |
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XP_001690446.1 |
26S proteasome regulatory subunit |
C. reinhardtii |
86.5 |
442 |
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NP_179604.1 |
26S protease regulatory complex subunit 4, putative |
A. thaliana |
85.3 |
442 |
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NP_010277.1 |
One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; required for normal peptide hydrolysis by the core 20S particle; Rpt2p |
S. cerevisiae |
83.5 |
436 |
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XP_961590.2 |
26S protease regulatory subunit 4 |
N. crassa |
81.7 |
458 |
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
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EST Profile: | Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this] |
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GEO profiles: |
Experimental gene expression data (Gene Expression Omnibus). |
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cDNA Sources: |
embryonic tissue; brain; mammary gland; molar; connective tissue; eye; thymus; mixed; kidney; fertilized ovum; pancreas; uncharacterized tissue; liver; heart; pituitary gland; ovary; testis; prostate; skin; stomach; blood; thyroid; muscle; tongue; lung; bone; intestine; extraembryonic tissue; spleen; dorsal root ganglion; inner ear; sympathetic ganglion; bone marrow; spinal cord; artery; nasopharynx; salivary gland |
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
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Chromosome: |
12 |
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Map position: |
12 E|12 41.0 cM |
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UniSTS entry: |
Chr 12 |
AI325227 |
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UniSTS entry: |
Chr 12 |
Psmc1 |
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SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.
mRNA sequences (11)
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AK088411.1 |
Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430016A19 product:protease (prosome, macropain) 26S subunit, ATPase 1, full insert sequence |
P |
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AK187947.1 |
Mus musculus cDNA, clone:Y0G0143J08, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000060445, based on BLAT search |
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AK133926.1 |
Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730529E17 product:protease (prosome, macropain) 26S subunit, ATPase 1, full insert sequence |
P |
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AK148906.1 |
Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120461K19 product:protease (prosome, macropain) 26S subunit, ATPase 1, full insert sequence |
P |
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AK161723.1 |
Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830416M11 product:protease (prosome, macropain) 26S subunit, ATPase 1, full insert sequence |
P |
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AK161641.1 |
Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730432L10 product:protease (prosome, macropain) 26S subunit, ATPase 1, full insert sequence |
P |
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AK166783.1 |
Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0012N12 product:protease (prosome, macropain) 26S subunit, ATPase 1, full insert sequence |
P |
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AK169015.1 |
Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920075A18 product:protease (prosome, macropain) 26S subunit, ATPase 1, full insert sequence |
P |
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U39302.1 |
Mus musculus 26S proteasome subunit 4 ATPase mRNA, complete cds |
P |
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NM_008947.3 |
Mus musculus protease (prosome, macropain) 26S subunit, ATPase 1 (Psmc1), mRNA |
P |
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BC003860.1 |
Mus musculus protease (prosome, macropain) 26S subunit, ATPase 1, mRNA (cDNA clone MGC:6597 IMAGE:3486436), complete cds |
PA |
EST sequences (10 of 551) [Show all sequences]
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CA563392.1 |
Clone NIA:K0313D06_IMAGE:30055529 |
bone |
5' read |
PM |
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CA563398.1 |
Clone NIA:K0313E01_IMAGE:30055536 |
bone |
5' read |
PM |
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CA566166.1 |
Clone NIA:K0347A03_IMAGE:30058754 |
bone |
5' read |
PM |
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CA568417.1 |
Clone NIA:K0427F04_IMAGE:30061695 |
bone marrow |
5' read |
P |
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CA770928.1 |
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pancreas |
5' read |
P |
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BY002913.1 |
Clone 6620413D20 |
ovary |
5' read |
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BY019771.1 |
Clone G830037B04 |
mammary gland |
5' read |
P |
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BY022305.1 |
Clone G930011H08 |
mammary gland |
5' read |
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BY024115.1 |
Clone G930021H09 |
mammary gland |
5' read |
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BY025267.1 |
Clone G930029N03 |
mammary gland |
5' read |
P |
Key to Symbols
P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria
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