Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss1092905	KWOK|OVLP-000804-143731		rev/T	A/G	agacagggtcttgctctgtcatccaggctg	agtccagtggtgtgattacggctcactgca	09/02/00	10/10/03	86	Genomic			99 %
ss1913075	KWOK|OVLP-000925-511572		fwd/B	C/T	tgcagtgagccgtaatcacaccactggact	cagcctggatgacagagcaagaccctgtct	10/06/00	10/10/03	87	Genomic			99 %
ss3666006	SC_JCM|AC020634.9_44475		rev/T	A/G	agacagggtcttgctctgtcatccaggctg	agtccagtggtgtgattacggctcactgca	09/24/01	10/10/03	100	Genomic			unknown
ss6441613	WI_SSAHASNP|NT_005543.12_1793523		rev/T	A/G	agacagggtcttgctctgtcatccaggctg	agtccagtggtgtgattacggctcactgca	02/12/03	10/10/03	111	Genomic			unknown
ss14216143	BCM_SSAHASNP|chr3.NT_005612.14_29931898		rev/T	A/G	agacagggtcttgctctgtcatccaggctg	agtccagtggtgtgattacggctcactgca	11/05/03	11/22/03	119	Genomic			unknown
ss16971610	CSHL-HAPMAP|CSHL-HuAA-200402.chr3.NT_005612.14_29931898		rev/T	A/G	agacagggtcttgctctgtcatccaggctg	agtccagtggtgtgattacggctcactgca	02/17/04	03/04/04	120	Genomic			unknown
ss19536291	CSHL-HAPMAP|CSHL-HuDD-200402.chr3.NT_005612.14_29931898		rev/T	A/G	agacagggtcttgctctgtcatccaggctg	agtccagtggtgtgattacggctcactgca	02/20/04	03/04/04	120	Genomic			unknown
ss21913938	SSAHASNP|WGSA-200403-chr3.chr3.NT_005612.14_29931898		rev/T	A/G	agacagggtcttgctctgtcatccaggctg	agtccagtggtgtgattacggctcactgca	03/20/04	03/20/04	121	Genomic			unknown
ss78558604	HGSV|Cor12878_SNV_20070510.chr3_124919442		rev/T	A/G	agacagggtcttgctctgtcatccaggctg	agtccagtggtgtgattacggctcactgca	10/17/07	10/20/07	129	Genomic			unknown
ss85703654	HGSV|Cor19129_SNV_20070510.chr3_124919442		rev/T	A/G	agacagggtcttgctctgtcatccaggctg	agtccagtggtgtgattacggctcactgca	12/06/07	12/10/07	130	Genomic			unknown
ss85882099	HGSV|Cor18517_SNV_20070510.chr3_124919442		rev/T	A/G	agacagggtcttgctctgtcatccaggctg	agtccagtggtgtgattacggctcactgca	12/06/07	12/10/07	130	Genomic			unknown
ss92263824	BCMHGSC_JDW|JWB-1658406		rev/T	A/G	agacagggtcttgctctgtcatccaggctg	agtccagtggtgtgattacggctcactgca	02/26/08	03/02/08	129	Genomic			unknown

Fasta sequence   (Legend)

 TTTCTCACCT CTCGCCTTTT GCCGAGATTT TGCAATCATC GAGATTGCTG GTGCAGCCCT
 CAGACGCGAT TTCTGCAGCC AGCCCTTCAT GCTTTCTCTG CCTTCCCTCC TCAGTGACTC
 TCTTCTTCTC CAAATCCTGG AAACTCCCAc aaatgtcact ttctctggga agcctaccct
 aatcacccca gaatgcgttC CCTGAACACC GTGTGCTTCT AGTATTACAC TTACTTAtca
 acaagtcttt actgcgcgcc tatattgatc agtgccaggc attgttctgg ggaaactgca
 gtagacagga cagctgaggg ccctgcctgc agggtgctta cgttctgatg aggaTGCCAG
 CAGCAGTCAG CACCTGGCCT CATTTCAAAT GCTGGCACGT GCTGTTAAGA ACATGAGCAG
 GTCACAAAGG AATAATTATA AAGAGAAAAA GCCAGTGAGT GGGGTGTGTG AATCGAGGAG
 GGTGAGAGGG TGTATCTTTA GTGCTGTGAG GAAGCCTCAG AGGTGTCCAT GGCctgggga
 aagagagctc taggtgggca gcacagcaag tgcaaggccc tgagtcagga gcaaggttga
 cccattcgag gagtagcaag acagcagcct ctgtggctgc agcaaagtag acggggcagt
 gtgatagaaa gtgagttcag aatgcggggg ctcaccattc caggcctctg gaggAGAGGA
 GAAAACAATT TACTCCGTGA AAATTCACTT TCATTTTACT CTACTTGCTT AATTATCTTC
 CTCTCCACAC TGTAAGCTCC CTGCAGGGAG GGATCACGTC ATACTGTGTG TAGAGCCAGG
 CCTGCCATGG GAGCATGCAT TCCCTGAATG GATGAGAGCA CAGAGGTTGC CGAACCTCCC
 CTGCAGTGCA GGGAGGCATT CCCTAGAATT CCTCGCTTTT CTGGGGGCTC AGTGCCCATT
 AGGGTGTGCA GGAAATCTGC AAATTACCTT CAAGAGTCCC TCAACAGggc taggcacagt
 gtctcatgcc tgtaatccca gcactttggg aggccaaggc aggtggatct cttgagccga
 ggagttcgag accaccttgg gcaacacggc aacacaccgt ctccacaaaa aacacaaaaa
 ttagccggga gtggtggccc atgcctctag tcccagctac tcaggaggct gaggcaggag
 gattgcttga gcctgcgagg tcgagactgc agttgcagtg agccgtaatc acaccactgg
 act
 Y
 cagcctggat gacagagcaa gaccctgtct caaaaaaaaa aaaaaaaaaa aaaaaaaaaa
 aAAAAGAGTC CCTCAACAAA TATTCCTTCT TTCCCCAACA CAGGCTAGGG AAAAAAAATT
 CCCCAATAGT TAACCAAGCA ATGAATGTCT TTCCTCCTGA CCCAGGATGA GTCCTGATCC
 AGGATGATTA ATTCAAATTC CTGCAGAGCC CAGGAATATC TGAAATACAG TATATATTTC
 ACAGCGTTTG GACTGAGTCA T

GeneView

Group Label	Contig->mRNA	Gene Model (contig mRNA transcript) Color Legend
reference	NT_005612->NM_053025 sv function
reference	NT_005612->NM_053026 sv function
reference	NT_005612->NM_053027 sv function
reference	NT_005612->NM_053028 sv function
HuRef	NW_001838882->NM_053025 sv function
HuRef	NW_001838882->NM_053026 sv function
HuRef	NW_001838882->NM_053027 sv function
HuRef	NW_001838882->NM_053028 sv function
Celera	NW_921807->NM_053025 sv function
Celera	NW_921807->NM_053026 sv function
Celera	NW_921807->NM_053027 sv function
Celera	NW_921807->NM_053028 sv function

Integrated Maps:

NCBI Resource Links

Population Diversity

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
DoubleHit found by:  BCM_SSAHASNP, NCBI	UNKNOWN	UNKNOWN	UNKNOWN