proteins
| 43 proteins |
L | COG0692 | Uracil DNA glycosylase | Help | |
|---|---|---|---|---|---|
| 1 from | query genome Encephalitozoon_cuniculi (Apansporoblastina | Microsporidia) | ||||
| ECU10g0530 | ||||
286 letters 0
0 1565 = |||ECU10g0530 (286) = -49
6 538 = YPO2704 (228) = -59
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ECU10g0530
(286 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
ECU10g0530 607 e-174
DR0689 222 9e-58
HI0018 219 7e-57
PM0065 217 2e-56
YPO2704 211 1e-54
Cj0086c 210 3e-54
PA0750 209 6e-54
SMc03195 207 2e-53
AGc4459 207 3e-53
NMB1222 206 6e-53
NMA1384 201 1e-51
BH3850 197 2e-50
BS_ung 196 5e-50
FN1226 195 1e-49
BU183 191 2e-48
BB0053 186 5e-47
CT607 177 2e-44
CPn0773 166 7e-41
CT435 30 4.7
# >ECU10g0530
# Length = 286
#
# Score = 607 bits (1565), Expect = e-174
# Identities = 286/286 (100%), Positives = 286/286 (100%)
#
# Query: 1 MTMDREKKEDLPGVFSVSESKGCHGKRQLSLDDMFSKRKTSAGTGPSKSLEAGWTYEGCA 60
# MTMDREKKEDLPGVFSVSESKGCHGKRQLSLDDMFSKRKTSAGTGPSKSLEAGWTYEGCA
# Sbjct: 1 MTMDREKKEDLPGVFSVSESKGCHGKRQLSLDDMFSKRKTSAGTGPSKSLEAGWTYEGCA 60
#
# Query: 61 QPCEYCRLEEKIDPRWRMHLKPEFGKDYFRGVKRFLHENRNHLPPIDKIFTFSRFFPLEK 120
# QPCEYCRLEEKIDPRWRMHLKPEFGKDYFRGVKRFLHENRNHLPPIDKIFTFSRFFPLEK
# Sbjct: 61 QPCEYCRLEEKIDPRWRMHLKPEFGKDYFRGVKRFLHENRNHLPPIDKIFTFSRFFPLEK 120
#
# Query: 121 TKVVIMGQDPYHNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWA 180
# TKVVIMGQDPYHNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWA
# Sbjct: 121 TKVVIMGQDPYHNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWA 180
#
# Query: 181 ERGVLLLNDVLTVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFI 240
# ERGVLLLNDVLTVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFI
# Sbjct: 181 ERGVLLLNDVLTVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFI 240
#
# Query: 241 NRNKHLVLTCGHPSPLSSSHFFGCKHFSKANKYLMDHGKSPVEWQV 286
# NRNKHLVLTCGHPSPLSSSHFFGCKHFSKANKYLMDHGKSPVEWQV
# Sbjct: 241 NRNKHLVLTCGHPSPLSSSHFFGCKHFSKANKYLMDHGKSPVEWQV 286
#
#
# >DR0689
# Length = 247
#
# Score = 222 bits (565), Expect = 9e-58
# Identities = 108/214 (50%), Positives = 136/214 (63%), Gaps = 3/214 (1%)
#
# Query: 76 WRMHLKPEFGKDYFRGVKRFLHENRNHL---PPIDKIFTFSRFFPLEKTKVVIMGQDPYH 132
# W+ L PEF YF + FL + R PP +F R+ PL + KV+I+GQDPYH
# Sbjct: 27 WQEALLPEFSAPYFHELTDFLRQERKEYTIYPPAPDVFNALRYTPLGEVKVLILGQDPYH 86
#
# Query: 133 NDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGVLLLNDVLT 192
# NQA GLSFSV G+ VPPSL+NIY E++ DI GF P HG L WAE+GVLLLN VLT
# Sbjct: 87 GPNQAHGLSFSVRPGVRVPPSLRNIYKELTEDIPGFVAPKHGYLRSWAEQGVLLLNAVLT 146
#
# Query: 193 VTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINRNKHLVLTCGH 252
# V + NSH G GW FT +++ +N K VVF+LWG +A+ K K I H+V+ GH
# Sbjct: 147 VRAGQANSHQGKGWEHFTDAVIKAVNAKEERVVFILWGSYARKKKKLITGKNHVVIESGH 206
#
# Query: 253 PSPLSSSHFFGCKHFSKANKYLMDHGKSPVEWQV 286
# PSPLS +FFG + FSK N+ L G+ PVEWQ+
# Sbjct: 207 PSPLSEQYFFGTRPFSKTNEALEKAGRGPVEWQL 240
#
#
# >HI0018
# Length = 219
#
# Score = 219 bits (557), Expect = 7e-57
# Identities = 105/216 (48%), Positives = 141/216 (64%), Gaps = 5/216 (2%)
#
# Query: 76 WRMHLKPEFGKDYFRGVKRFLH----ENRNHLPPIDKIFTFSRFFPLEKTKVVIMGQDPY 131
# W + E + YF+ + +H + PP + +F ++ E KVVI+GQDPY
# Sbjct: 4 WTDVIGTEKAQPYFQHTLQQVHLARASGKTIYPPQEDVFNAFKYTAFEDVKVVILGQDPY 63
#
# Query: 132 HNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGVLLLNDVL 191
# H NQA GL+FSV + +PPSL NIY E++ DI GF++PS+G L WAE+GVLLLN VL
# Sbjct: 64 HGPNQAHGLAFSVKPEVAIPPSLLNIYKELTQDISGFQMPSNGYLVKWAEQGVLLLNTVL 123
#
# Query: 192 TVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINRNKHLVLTCG 251
# TV + +SHA +GW FT ++ V+NE +VF+LWG HAQ KG+ I+R +HLVLT
# Sbjct: 124 TVERGMAHSHANLGWERFTDKVIAVLNEHREKLVFLLWGSHAQKKGQMIDRTRHLVLTAP 183
#
# Query: 252 HPSPLSSSH-FFGCKHFSKANKYLMDHGKSPVEWQV 286
# HPSPLS+ FFGC+HFSK N YL HG P++WQ+
# Sbjct: 184 HPSPLSAHRGFFGCRHFSKTNSYLESHGIKPIDWQI 219
#
#
# >PM0065
# Length = 222
#
# Score = 217 bits (553), Expect = 2e-56
# Identities = 105/216 (48%), Positives = 142/216 (65%), Gaps = 5/216 (2%)
#
# Query: 76 WRMHLKPEFGKDYFRGVKRFLHENRNH----LPPIDKIFTFSRFFPLEKTKVVIMGQDPY 131
# W+ + E + YF+ + +H+ R PP ++F+ + E KVVI+GQDPY
# Sbjct: 4 WKDVIGTEKTQPYFKHILDQVHQARASGKIVYPPPQEVFSAFQLTEFEAVKVVIIGQDPY 63
#
# Query: 132 HNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGVLLLNDVL 191
# H NQA GL+FSV G+ PPSL N+Y E++ DIEGF++P+HG L WAE+GVLLLN VL
# Sbjct: 64 HGPNQAHGLAFSVKPGVVPPPSLMNMYKELTQDIEGFQIPNHGYLVPWAEQGVLLLNTVL 123
#
# Query: 192 TVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINRNKHLVLTCG 251
# TV + + +SHA GW FT ++ +N + +VF+LWG HAQ KG+FI+R KH V T
# Sbjct: 124 TVEQGKAHSHASFGWETFTDRVIAALNAQREKLVFLLWGSHAQKKGQFIDRQKHCVFTAP 183
#
# Query: 252 HPSPLSSSH-FFGCKHFSKANKYLMDHGKSPVEWQV 286
# HPSPLS+ F GC+HFSK N YLM G SP++WQ+
# Sbjct: 184 HPSPLSAHRGFLGCRHFSKTNAYLMAQGLSPIQWQL 219
#
#
# >YPO2704
# Length = 228
#
# Score = 211 bits (538), Expect = 1e-54
# Identities = 104/215 (48%), Positives = 134/215 (61%), Gaps = 5/215 (2%)
#
# Query: 76 WRMHLKPEFGKDYFRGVKRFLHENRNH----LPPIDKIFTFSRFFPLEKTKVVIMGQDPY 131
# W + E + YF+ ++ R PP IF R L++ KVVI+GQDPY
# Sbjct: 7 WHDVIGQEKEQPYFKDTLAYVAAERRAGKTIYPPQKDIFNAFRLTELDQVKVVILGQDPY 66
#
# Query: 132 HNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGVLLLNDVL 191
# H NQA GLSFSV G+P PPSL NIY E+ +DI GF+ P+HG L WAE+GVLLLN VL
# Sbjct: 67 HGPNQAHGLSFSVLPGVPAPPSLGNIYKELVTDIPGFQRPNHGFLQSWAEQGVLLLNTVL 126
#
# Query: 192 TVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINRNKHLVLTCG 251
# TV + +SHA +GW FT ++ +NE V+FMLWG HAQ KG+ IN +H +L
# Sbjct: 127 TVEAGKAHSHANLGWETFTDKVIAALNEHREGVIFMLWGSHAQKKGRIINTERHYILKAP 186
#
# Query: 252 HPSPLSSSH-FFGCKHFSKANKYLMDHGKSPVEWQ 285
# HPSPLS+ F GCKHFS+AN+ L + P++WQ
# Sbjct: 187 HPSPLSAHRGFLGCKHFSQANQLLQQQNQQPIDWQ 221
#
#
# >Cj0086c
# Length = 231
#
# Score = 210 bits (535), Expect = 3e-54
# Identities = 100/220 (45%), Positives = 146/220 (65%), Gaps = 5/220 (2%)
#
# Query: 71 KIDPRWRMHLKPEFGKDYFRGVKR----FLHENRNHLPPIDKIFTFSRFFPLEKTKVVIM 126
# KI+ W+ L+ EF K YF +K+ +++N PP + IF PL++ K++I+
# Sbjct: 12 KINDDWKEFLRDEFQKKYFLEIKKQYLNAINQNIIIYPPANLIFNAFNLCPLKEIKIIIL 71
#
# Query: 127 GQDPYHNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGVLL 186
# GQDPYH NQAMGLSFSVP + +PPSL NI+ E+ +D+ S GDLS WA++GVLL
# Sbjct: 72 GQDPYHQPNQAMGLSFSVPKNVKIPPSLNNIFKELQNDLNITPAKS-GDLSSWAKQGVLL 130
#
# Query: 187 LNDVLTVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINRNKHL 246
# LN +L+V N+ SH+ GW+EF+ I+ ++ + + +VFMLWG +A+ K I+ KHL
# Sbjct: 131 LNSILSVEANKAASHSSWGWQEFSDAIIHKLSNEKSGLVFMLWGNYAKNKEILIDNTKHL 190
#
# Query: 247 VLTCGHPSPLSSSHFFGCKHFSKANKYLMDHGKSPVEWQV 286
# +L HPSPL+ + F GCKHFSKAN++L GK P++W++
# Sbjct: 191 ILKAAHPSPLARTGFLGCKHFSKANEFLKKVGKIPIDWKI 230
#
#
# >PA0750
# Length = 231
#
# Score = 209 bits (532), Expect = 6e-54
# Identities = 102/221 (46%), Positives = 142/221 (64%), Gaps = 6/221 (2%)
#
# Query: 71 KIDPRWRMHLKPEFGKDYFRGVKRFLHENRNH----LPPIDKIFTFSRFFPLEKTKVVIM 126
# K++ W+ L+ EF K Y + + FL + + PP IF PLE KVVI+
# Sbjct: 9 KLEASWKEALREEFDKPYMKQLGEFLRQEKAAGKVIFPPGPLIFNALNTTPLENVKVVII 68
#
# Query: 127 GQDPYHNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGVLL 186
# GQDPYH QA GL FSV G+P PPSL+NIY E++ D+ +P++G L WAE+GVLL
# Sbjct: 69 GQDPYHGPGQAHGLCFSVQPGVPTPPSLQNIYKELNRDLN-IPIPNNGYLQRWAEQGVLL 127
#
# Query: 187 LNDVLTVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINRNKHL 246
# LN LTV + + SHA GW+ FT +++V+NE+C +VF+LWG HAQ+K K I+ +HL
# Sbjct: 128 LNTSLTVEQAKAGSHANAGWQPFTDRVIEVVNERCERLVFLLWGSHAQSKQKLIDPQRHL 187
#
# Query: 247 VLTCGHPSPLSSSH-FFGCKHFSKANKYLMDHGKSPVEWQV 286
# +L HPSPLS+ F G HFS+ NK+L +GK+P++W +
# Sbjct: 188 ILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQNGKTPIDWSL 228
#
#
# >SMc03195
# Length = 241
#
# Score = 207 bits (527), Expect = 2e-53
# Identities = 104/221 (47%), Positives = 138/221 (62%), Gaps = 6/221 (2%)
#
# Query: 71 KIDPRWRMHLKPEFGKDYFRGVKRFLHENRNH----LPPIDKIFTFSRFFPLEKTKVVIM 126
# +++ W+ L EF Y +KRFL E + P + F PL++ +VVI+
# Sbjct: 6 RLEESWKAVLGGEFRHGYMAELKRFLLEEKQQGRQIFPRGVEYFRALDLTPLDRVRVVIL 65
#
# Query: 127 GQDPYHNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGVLL 186
# GQDPYH D QA GL FSV G+ PPSL NIY E+ D+ G HG L WA +GVLL
# Sbjct: 66 GQDPYHGDGQAHGLCFSVRPGVRTPPSLVNIYKELQEDL-GIPPARHGFLESWARQGVLL 124
#
# Query: 187 LNDVLTVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINRNKHL 246
# LN VLTV + R SH G GW FT +++ +NE+ VVFMLWG +AQ K F++R++HL
# Sbjct: 125 LNSVLTVERGRAASHQGRGWERFTDAVIRAVNEQAQPVVFMLWGSYAQRKAAFVDRSRHL 184
#
# Query: 247 VLTCGHPSPLSS-SHFFGCKHFSKANKYLMDHGKSPVEWQV 286
# VLT HPSPLS+ + FFGC+HFSKAN +L G P++W++
# Sbjct: 185 VLTAPHPSPLSAHAGFFGCRHFSKANAFLTSKGLDPIDWRL 225
#
#
# >AGc4459
# Length = 241
#
# Score = 207 bits (526), Expect = 3e-53
# Identities = 103/221 (46%), Positives = 141/221 (63%), Gaps = 6/221 (2%)
#
# Query: 71 KIDPRWRMHLKPEFGKDYFRGVKRFLHENRNH----LPPIDKIFTFSRFFPLEKTKVVIM 126
# K++ W+ L EF Y + +K FL + P + F PL++ KVVI+
# Sbjct: 11 KLEDSWKHVLSGEFASPYMQKLKEFLLAEKTAGKRIFPKGAEYFRALDLTPLDEVKVVIL 70
#
# Query: 127 GQDPYHNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGVLL 186
# GQDPYH QA GL FSV G+ +PPSL NIY E+ SD+ G HG L WA++GVLL
# Sbjct: 71 GQDPYHGLGQAHGLCFSVQPGVRIPPSLVNIYKELQSDL-GIRPVKHGFLESWAKQGVLL 129
#
# Query: 187 LNDVLTVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINRNKHL 246
# LN VLTV + R SH G GW +FT +++ +N++C +VVF+LWG +AQ K F+++ KHL
# Sbjct: 130 LNSVLTVEEARAASHQGQGWEKFTDAVIRAVNDECDHVVFLLWGSYAQKKAAFVDQRKHL 189
#
# Query: 247 VLTCGHPSPLSSSH-FFGCKHFSKANKYLMDHGKSPVEWQV 286
# VL HPSPLS+ + FFG HFSKAN +L+ HG+ P++WQ+
# Sbjct: 190 VLRSPHPSPLSAHNGFFGNGHFSKANAFLVSHGRDPIDWQL 230
#
#
# >NMB1222
# Length = 219
#
# Score = 206 bits (523), Expect = 6e-53
# Identities = 101/216 (46%), Positives = 137/216 (62%), Gaps = 5/216 (2%)
#
# Query: 76 WRMHLKPEFGKDYFRGVKRFLHENRNH----LPPIDKIFTFSRFFPLEKTKVVIMGQDPY 131
# W L E + YF+ + + + R PP +F R ++ K VI+GQDPY
# Sbjct: 4 WHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPAADVFNAFRLTAFDRVKAVILGQDPY 63
#
# Query: 132 HNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGVLLLNDVL 191
# H QA GL+FSV GI +PPSL NIY E+ +DIEGF +P+HG L+ WAE+GVLLLN VL
# Sbjct: 64 HGAGQAHGLAFSVRQGIRIPPSLLNIYKELETDIEGFSIPAHGCLTAWAEQGVLLLNTVL 123
#
# Query: 192 TVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINRNKHLVLTCG 251
# TV + +SHA +GW FT +++ + ++VFMLWG +AQ KG+ I+ HL+LT
# Sbjct: 124 TVRAGQAHSHALLGWERFTDTVIRQLATHRKHLVFMLWGGYAQQKGRLIDSQNHLILTAP 183
#
# Query: 252 HPSPLSSSH-FFGCKHFSKANKYLMDHGKSPVEWQV 286
# HPSPLS+ FFGC+HFS+AN YL HG P+ W++
# Sbjct: 184 HPSPLSAYRGFFGCRHFSQANSYLSRHGIDPINWKL 219
#
#
# >NMA1384
# Length = 219
#
# Score = 201 bits (512), Expect = 1e-51
# Identities = 100/216 (46%), Positives = 136/216 (62%), Gaps = 5/216 (2%)
#
# Query: 76 WRMHLKPEFGKDYFRGVKRFLHENRNH----LPPIDKIFTFSRFFPLEKTKVVIMGQDPY 131
# W L E + YF+ + + + R PP +F R ++ K VI+GQDPY
# Sbjct: 4 WHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPAADVFNAFRLTAFDRVKAVILGQDPY 63
#
# Query: 132 HNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGVLLLNDVL 191
# H QA GL+FSV GI +PPSL NIY E+ +DIEGF +P+HG L+ WAE+GVLLLN VL
# Sbjct: 64 HGAGQAHGLAFSVRQGIRIPPSLLNIYKELETDIEGFSIPAHGCLTAWAEQGVLLLNTVL 123
#
# Query: 192 TVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINRNKHLVLTCG 251
# TV + +SHA +GW FT +++ + ++VFMLWG +AQ K K I+ +L+LT
# Sbjct: 124 TVRAGQAHSHALLGWERFTDTVIRQLATHRKHLVFMLWGGYAQQKRKLIDSQNYLILTAP 183
#
# Query: 252 HPSPLSSSH-FFGCKHFSKANKYLMDHGKSPVEWQV 286
# HPSPLS+ FFGC+HFS+AN YL HG P+ W++
# Sbjct: 184 HPSPLSAYRGFFGCRHFSQANSYLSRHGIDPINWKL 219
#
#
# >BH3850
# Length = 224
#
# Score = 197 bits (502), Expect = 2e-50
# Identities = 98/215 (45%), Positives = 138/215 (63%), Gaps = 5/215 (2%)
#
# Query: 76 WRMHLKPEFGKDYFRGVKRFL---HENRNHLPPIDKIFTFSRFFPLEKTKVVIMGQDPYH 132
# W L+ EF K Y+ ++ FL + + P + IF + PL + KVVI+GQDPYH
# Sbjct: 8 WADVLEAEFQKPYYVQLREFLKQEYSTQTIYPSMYDIFNALHYTPLAEAKVVILGQDPYH 67
#
# Query: 133 NDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGVLLLNDVLT 192
# NQA GLSFSV G+P+PPSL+NI+ E+ D+ G +P++G L+ WAE+GVLLLN VLT
# Sbjct: 68 GPNQAHGLSFSVKPGVPLPPSLQNIFKELREDL-GCPIPNNGHLTPWAEQGVLLLNTVLT 126
#
# Query: 193 VTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINRNKHLVLTCGH 252
# V K + SH G GW FT ++ +NE+ V+F+LWGRHAQ K I ++H +LT H
# Sbjct: 127 VRKGQAASHRGKGWESFTDRVITCLNEREKPVIFVLWGRHAQEKQALITNDRHYILTAPH 186
#
# Query: 253 PSPLSSSH-FFGCKHFSKANKYLMDHGKSPVEWQV 286
# PSP S++ FFG + FS N+ L + G+S + W++
# Sbjct: 187 PSPFSANRGFFGSRPFSTINRILQEQGESQIHWEI 221
#
#
# >BS_ung
# Length = 225
#
# Score = 196 bits (498), Expect = 5e-50
# Identities = 98/221 (44%), Positives = 139/221 (62%), Gaps = 5/221 (2%)
#
# Query: 68 LEEKIDPRWRMHLKPEFGKDYFRGVKRFL---HENRNHLPPIDKIFTFSRFFPLEKTKVV 124
# +++ + W LK EF K Y++ ++ L + + P IF + + KVV
# Sbjct: 1 MKQLLQDSWWNQLKEEFEKPYYQELREMLKREYAEQTIYPDSRDIFNALHYTSYDDVKVV 60
#
# Query: 125 IMGQDPYHNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGV 184
# I+GQDPYH QA GLSFSV G+ PPSLKNI+LE+ DI G +P+HG L WA++GV
# Sbjct: 61 ILGQDPYHGPGQAQGLSFSVKPGVKQPPSLKNIFLELQQDI-GCSIPNHGSLVSWAKQGV 119
#
# Query: 185 LLLNDVLTVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINRNK 244
# LLLN VLTV + + NSH G GW T I+ V++E+ V+F+LWGRHAQ K + I+ +K
# Sbjct: 120 LLLNTVLTVRRGQANSHKGKGWERLTDRIIDVLSERERPVIFILWGRHAQMKKERIDTSK 179
#
# Query: 245 HLVLTCGHPSPLSSSH-FFGCKHFSKANKYLMDHGKSPVEW 284
# H ++ HPSP S+ + FFG + FS+AN YL G++P++W
# Sbjct: 180 HFIIESTHPSPFSARNGFFGSRPFSRANAYLEKMGEAPIDW 220
#
#
# >FN1226
# Length = 226
#
# Score = 195 bits (495), Expect = 1e-49
# Identities = 100/220 (45%), Positives = 142/220 (64%), Gaps = 5/220 (2%)
#
# Query: 71 KIDPRWRMHLKPEFGKDYFRGVKRFLHE---NRNHLPPIDKIFTFSRFFPLEKTKVVIMG 127
# KI+ W+ L+ EF K+YF +K L E N PP I P + KVV++G
# Sbjct: 3 KINNDWKEILEEEFEKEYFIKLKETLEEEYKNYTVYPPKRDILNAFFLTPYSEVKVVLLG 62
#
# Query: 128 QDPYHNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGVLLL 187
# QDPYH QA GL+FSV I PPSL N+Y E+ D+ G +P++G L W+++GVLLL
# Sbjct: 63 QDPYHQRGQAHGLAFSVNYEIKTPPSLVNMYKELQDDL-GLYIPNNGFLEKWSKQGVLLL 121
#
# Query: 188 NDVLTVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINRNKHLV 247
# N LTV + NSH+ IGW+ FT +++ +NE+ V+F+LWG +A++K KFI+ NKH +
# Sbjct: 122 NTTLTVRDSEANSHSKIGWQTFTDNVIKSLNEREKPVIFILWGNNAKSKEKFIDTNKHYI 181
#
# Query: 248 LTCGHPSPLSSSH-FFGCKHFSKANKYLMDHGKSPVEWQV 286
# L HPSPLS++ FFGCKHFS+AN+ L + G+ ++WQ+
# Sbjct: 182 LKGVHPSPLSANKGFFGCKHFSEANRILKNLGEKEIDWQI 221
#
#
# >BU183
# Length = 220
#
# Score = 191 bits (484), Expect = 2e-48
# Identities = 100/213 (46%), Positives = 128/213 (59%), Gaps = 4/213 (1%)
#
# Query: 76 WRMHLKPEFGKDYFRGVKRFLHENR-NHLPPIDKIFTFSRFF--PLEKTKVVIMGQDPYH 132
# W+ L E K YF + RFL + R + D+ F+ FF KVVI+GQDPY
# Sbjct: 5 WKDVLSQEKKKKYFINIIRFLKKERLKKIIYPDQKDIFNAFFLTSFNDIKVVILGQDPYF 64
#
# Query: 133 NDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGVLLLNDVLT 192
# + NQA GLSFSVP + +PPSLKNIY E+++D + + HG L WA +GV LLN +LT
# Sbjct: 65 SKNQAHGLSFSVPKHVTIPPSLKNIYKELNTDFKKEHIFHHGCLESWANQGVFLLNSILT 124
#
# Query: 193 VTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINRNKHLVLTCGH 252
# V +P SH+ IGW FT ++ VIN +VVF+ WG +AQ K INR H +L H
# Sbjct: 125 VESGKPKSHSNIGWNIFTDKVISVINLYKNSVVFLFWGSNAQKKSHLINRKNHYILKAAH 184
#
# Query: 253 PSPLSSSH-FFGCKHFSKANKYLMDHGKSPVEW 284
# PSPLS+ FFGCKHFS NK L+ K P+ W
# Sbjct: 185 PSPLSAYRGFFGCKHFSLTNKILLKTKKKPINW 217
#
#
# >BB0053
# Length = 223
#
# Score = 186 bits (472), Expect = 5e-47
# Identities = 97/224 (43%), Positives = 139/224 (61%), Gaps = 7/224 (3%)
#
# Query: 68 LEEKIDPRWRMHLKPEFGKDYFRGVKRFL-HE----NRNHLPPIDKIFTFSRFFPLEKTK 122
# ++ KI+ W+ L EF K+YF+ + +F+ HE N PP IF P + K
# Sbjct: 1 MKVKIEESWKEVLNNEFNKEYFKKLVKFIKHEYKTKNGKIFPPPKLIFNAFNSLPFKDIK 60
#
# Query: 123 VVIMGQDPYHNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAER 182
# VVI+GQDPYH NQA GL+FSV I +PPSL+NI+ EI ++ +P+ GDL WA +
# Sbjct: 61 VVIIGQDPYHGKNQANGLAFSVDSKIKIPPSLQNIFKEIEKSLKIKTIPN-GDLKRWAIQ 119
#
# Query: 183 GVLLLNDVLTVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGKFINR 242
# GV L+N +LTV + +P+SH IGW FT ++++I++ N+VFMLWG A++K I+
# Sbjct: 120 GVFLINTILTVEEGKPSSHKAIGWEIFTDEVIKIISKNLKNIVFMLWGNLARSKKGLIDP 179
#
# Query: 243 NKHLVLTCGHPSPLSSSH-FFGCKHFSKANKYLMDHGKSPVEWQ 285
# KHL+L HPSP S+++ F G HFS A YL H K+ + +Q
# Sbjct: 180 TKHLILETSHPSPYSANNGFLGSNHFSSALDYLKKHNKNIINFQ 223
#
#
# >CT607
# Length = 229
#
# Score = 177 bits (449), Expect = 2e-44
# Identities = 95/223 (42%), Positives = 135/223 (59%), Gaps = 8/223 (3%)
#
# Query: 70 EKIDPRWRMHLKPEFGKDYFRGVKRFL---HENRNHLPPIDKIFTFSRFFPLEKTKVVIM 126
# E++ P W+ LK E+ + Y+ + FL + P + +F + P ++ +VVI+
# Sbjct: 8 EQLPPSWQEQLKDEWSQPYWSQLLAFLKSEYAQATIYPKKENVFAALQSTPFDQVRVVIL 67
#
# Query: 127 GQDPYHNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSHGDLSGWAERGVLL 186
# GQDPYH + QA GLSFSVP G +PPSL+NI+ E+ +D+ G S G L WA++GVLL
# Sbjct: 68 GQDPYHGEGQAHGLSFSVPRGQALPPSLRNIFQELHTDL-GIRNES-GCLQAWADQGVLL 125
#
# Query: 187 LNDVLTVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGK--FINRNK 244
# LN VLTV SHAG GW FT I+ + + T+V+F+LWG A+ K F +++
# Sbjct: 126 LNTVLTVRAGEAFSHAGRGWERFTDAIVTKLIQNRTHVIFVLWGNAARQKCNLLFQTKHQ 185
#
# Query: 245 HLVLTCGHPSPLSSSH-FFGCKHFSKANKYLMDHGKSPVEWQV 286
# H VL C HPSPL++ FFGC HFSK N L GK+ + W++
# Sbjct: 186 HAVLACPHPSPLAAHRGFFGCCHFSKINYLLKKQGKTMINWKI 228
#
#
# >CPn0773
# Length = 236
#
# Score = 166 bits (419), Expect = 7e-41
# Identities = 94/225 (41%), Positives = 137/225 (60%), Gaps = 10/225 (4%)
#
# Query: 69 EEKIDPRWRMHLKPEFGKDYFRGVKRFL-HENRNHL--PPIDKIFTFSRFFPLEKTKVVI 125
# +E++ WR LK E+ K Y + + FL E + H P + +F+ R P ++ +VVI
# Sbjct: 14 QEQLPLCWREQLKEEWSKPYMQQLLIFLKQEYKEHTVYPEENCVFSALRSTPFDQVRVVI 73
#
# Query: 126 MGQDPYHNDNQAMGLSFSVPVGIPVPPSLKNIYLEISSDIEGFEVPSH-GDLSGWAERGV 184
# +GQDPY QA GLSFSVP G +PPSL NI+ E+ +D+ + +H G L WA +G+
# Sbjct: 74 LGQDPYPGKGQAHGLSFSVPEGQRLPPSLINIFRELKTDLG---IENHKGCLQSWANQGI 130
#
# Query: 185 LLLNDVLTVTKNRPNSHAGIGWREFTSCILQVINEKCTNVVFMLWGRHAQAKGK--FINR 242
# LLLN VLTV P SHAG GW FT I+ + ++ T+++F+LWG A+ K + F ++
# Sbjct: 131 LLLNTVLTVRAGEPFSHAGKGWELFTDAIVTKLIQERTHIIFVLWGAAARKKCELLFNSK 190
#
# Query: 243 NKHLVLTCGHPSPLSSSH-FFGCKHFSKANKYLMDHGKSPVEWQV 286
# ++H VL+ HPSPL++ FFGC HFSK N L K + W++
# Sbjct: 191 HQHAVLSSPHPSPLAAHRGFFGCSHFSKINYLLNKLNKPMINWKL 235
#
#
# >CT435
# Length = 350
#
# Score = 30.4 bits (67), Expect = 4.7
# Identities = 21/67 (31%), Positives = 33/67 (48%), Gaps = 6/67 (8%)
#
# Query: 11 LPGVFSVSESKGC-HGKRQLSLDDMFSKRKTSAGTGPS-----KSLEAGWTYEGCAQPCE 64
# LP +S++ S C HGK +L + + + KT G K L+ G ++ G QP
# Sbjct: 146 LPRFYSIASSPTCSHGKLELLVRCVSFQGKTQLRYGLCSAFLCKDLQEGESFRGFIQPTR 205
#
# Query: 65 YCRLEEK 71
# + LE+K
# Sbjct: 206 HFTLEQK 212
#
#
Database: myva
Posted date: Sep 17, 2002 10:27 AM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.320 0.138 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,743,570
Number of Sequences: 192987
Number of extensions: 1447803
Number of successful extensions: 2774
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2635
Number of HSP's gapped (non-prelim): 48
length of query: 286
length of database: 59,019,183
effective HSP length: 108
effective length of query: 178
effective length of database: 38,176,587
effective search space: 6795432486
effective search space used: 6795432486
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
S2: 65 (29.6 bits)