R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 374 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|1076510|pir||S54833 peptidylprolyl isomerase (EC 5.2.1.8) Cyp - kidney bean
>gi|829119|emb|CAA52414.1| (X74403) cyclophilin [Phaseolus
vulgaris]
Length = 172
Frame 1 hits (HSPs): _____________________________
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
__________________
Annotated Domains:
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 494 (173.9 bits), Expect = 3.3e-46, P = 3.3e-46
Identities = 91/98 (92%), Positives = 94/98 (95%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
MPNPKVFFDMT GGQ AGRIV ELYADVTPRTAENFRALCTGEKGVGRSGKP+H+KGS F
Sbjct: 1 MPNPKVFFDMTIGGQPAGRIVFELYADVTPRTAENFRALCTGEKGVGRSGKPVHFKGSIF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP+FMCQGGDFTAGNGTGGESIYGAKFADENFVKK
Sbjct: 61 HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 98
>gi|11270320|pir||T50770 hypothetical protein vcCyP [imported] - fava bean
>gi|3063396|dbj|BAA25755.1| (AB012947) vcCyP [Vicia faba]
Length = 171
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 488 (171.8 bits), Expect = 1.4e-45, P = 1.4e-45
Identities = 88/98 (89%), Positives = 95/98 (96%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NPKVFFDMT GGQ+AGRI+ EL+ADVTPRTAENFRALCTGEKGVGRSGKPLH+KGSSF
Sbjct: 1 MSNPKVFFDMTVGGQNAGRIIFELFADVTPRTAENFRALCTGEKGVGRSGKPLHFKGSSF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP+FMCQGGDFTAGNGTGGESIYG+KFADENF+KK
Sbjct: 61 HRVIPNFMCQGGDFTAGNGTGGESIYGSKFADENFIKK 98
>gi|3334157|sp|Q39613|CYPH_CATRO PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE)
(ROTAMASE) (CYCLOPHILIN) (CYCLOSPORIN A-BINDING PROTEIN)
>gi|7437317|pir||T10056 peptidylprolyl isomerase (EC 5.2.1.8)
(cyclophilin 1), cytosolic - Madagascar periwinkle
>gi|1220142|emb|CAA59468.1| (X85185) cyclophilin [Catharanthus
roseus]
Length = 172
Frame 1 hits (HSPs): _____________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 18..44
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 55..94
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 102..146
PFAM pro_isomerase: Cyclophilin type peptidyl 5..172
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 103..118
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 118..130
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 131..146
PRODOM PD071476: CYPH_CATRO 1..20
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..166
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 484 (170.4 bits), Expect = 3.8e-45, P = 3.8e-45
Identities = 88/98 (89%), Positives = 92/98 (93%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
MPNP+VFFDM+ GGQ AGRIVMEL+AD TPRTAENFRALCTGEKG GRSGKPLHYK SSF
Sbjct: 1 MPNPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP FMCQGGDFTAGNGTGGESIYGAKFADENF+KK
Sbjct: 61 HRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKK 98
>gi|11270316|pir||T50768 cyclophylin [imported] - Digitalis lanata
>gi|1563719|emb|CAA69622.1| (Y08320) cyclophylin [Digitalis lanata]
Length = 172
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
Plus Strand HSPs:
Score = 482 (169.7 bits), Expect = 6.3e-45, P = 6.3e-45
Identities = 88/98 (89%), Positives = 92/98 (93%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NPKVFFDMT GGQ GRIVMELYADV P+TAENFRALCTGEKGVG++GKPLHYKGS+F
Sbjct: 1 MSNPKVFFDMTIGGQPCGRIVMELYADVVPKTAENFRALCTGEKGVGKTGKPLHYKGSAF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP FMCQGGDFTAGNGTGGESIYGAKFADENFVKK
Sbjct: 61 HRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 98
>gi|6014890|sp|O49886|CYPH_LUPLU PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE)
(ROTAMASE) (CYCLOPHILIN) (CYCLOSPORIN A-BINDING PROTEIN)
>gi|2760537|emb|CAA76054.1| (Y16088) cytosolic form of cyclophilin
[Lupinus luteus] >gi|6003483|gb|AAF00471.1| (AF178458) cytosolic
cyclophilin [Lupinus luteus]
Length = 172
Frame 1 hits (HSPs): _____________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
__________________
Annotated Domains:
PFAM pro_isomerase: Cyclophilin type peptidyl 5..172
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 103..118
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 118..130
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 131..146
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..166
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 471 (165.8 bits), Expect = 9.2e-44, P = 9.2e-44
Identities = 86/98 (87%), Positives = 90/98 (91%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NPKVFFDM G AGRIVMELYAD TPRTAENFRALCTGEKGVGRSGKPLHYKGS+F
Sbjct: 1 MSNPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP+FMCQGGDFTAGNGTG ESIYGAKFADENF+K+
Sbjct: 61 HRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKR 98
>gi|68406|pir||CSTO peptidylprolyl isomerase (EC 5.2.1.8) - tomato
Length = 171
Frame 1 hits (HSPs): _____________________________
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
__________________
Annotated Domains:
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 469 (165.1 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 85/98 (86%), Positives = 90/98 (91%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NPKVFFD+T GG AGR+VMELYAD TP+TAENFRALCTGEKGVG+ GKPLHYKGS+F
Sbjct: 1 MANPKVFFDLTIGGAPAGRVVMELYADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP FMCQGGDFTAGNGTGGESIYGAKF DENFVKK
Sbjct: 61 HRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKK 98
>gi|11270318|pir||T50769 cyclophilin [imported] - Digitalis lanata
>gi|1561575|emb|CAA69598.1| (Y08273) cyclophilin [Digitalis lanata]
Length = 172
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
Plus Strand HSPs:
Score = 469 (165.1 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 86/98 (87%), Positives = 91/98 (92%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M PKVFFDM+ GGQ GRIVMELYADV P+TA+NFRALCTGEKGVG+SGKPLHYKGS+F
Sbjct: 1 MSLPKVFFDMSIGGQPCGRIVMELYADVVPKTADNFRALCTGEKGVGKSGKPLHYKGSAF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP FMCQGGDFTAGNGTGGESIYGAKFADENFVKK
Sbjct: 61 HRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 98
>gi|2129569|pir||S71219 peptidylprolyl isomerase (EC 5.2.1.8) ROC3 -
Arabidopsis thaliana >gi|1305455|gb|AAB96832.1| (U40399) cytosolic
cyclophilin [Arabidopsis thaliana]
>gi|4581104|gb|AAD24594.1|AC005825_1 (AC005825) cytosolic
cyclophilin (ROC3) [Arabidopsis thaliana]
Length = 173
Frame 1 hits (HSPs): _____________________________
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | | 173
0 50 100 150
__________________
Annotated Domains:
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 56..73
__________________
Plus Strand HSPs:
Score = 468 (164.7 bits), Expect = 1.9e-43, P = 1.9e-43
Identities = 83/96 (86%), Positives = 90/96 (93%), Frame = +1
Query: 70 NPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 249
NPKV+FDMT GG+SAGRIVMELYAD TP TAENFRALCTGE+G+G+ GKPLHYKGSSFHR
Sbjct: 4 NPKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHR 63
Query: 250 VIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
VIP FMCQGGDFTAGNGTGGESIYG+KF DENF+KK
Sbjct: 64 VIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKK 99
>gi|118103|sp|P21568|CYPH_LYCES PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE)
(ROTAMASE) (CYCLOPHILIN) (CYCLOSPORIN A-BINDING PROTEIN)
>gi|170440|gb|AAA63543.1| (M55019) cyclophilin [Lycopersicon
esculentum]
Length = 171
Frame 1 hits (HSPs): _____________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 18..44
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 55..94
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 102..146
PFAM pro_isomerase: Cyclophilin type peptidyl 5..171
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 103..118
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 118..130
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 131..146
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..166
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 465 (163.7 bits), Expect = 4.0e-43, P = 4.0e-43
Identities = 84/98 (85%), Positives = 90/98 (91%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NPKVFFD+T GG AGR+VMEL+AD TP+TAENFRALCTGEKGVG+ GKPLHYKGS+F
Sbjct: 1 MANPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP FMCQGGDFTAGNGTGGESIYGAKF DENFVKK
Sbjct: 61 HRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKK 98
>gi|11270322|pir||T50771 cyclophilin [imported] - potato
>gi|4559302|gb|AAD22975.1|AF126551_1 (AF126551) cyclophilin
[Solanum tuberosum subsp. tuberosum]
Length = 171
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 463 (163.0 bits), Expect = 6.5e-43, P = 6.5e-43
Identities = 83/98 (84%), Positives = 90/98 (91%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NP+VFFD+T GG AGR+VMEL+AD TP+TAENFRALCTGEKGVG+ GKPLHYKGS+F
Sbjct: 1 MANPRVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP FMCQGGDFTAGNGTGGESIYGAKF DENFVKK
Sbjct: 61 HRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFVKK 98
>gi|68407|pir||CSRP peptidylprolyl isomerase (EC 5.2.1.8) - rape
Length = 171
Frame 1 hits (HSPs): _____________________________
Annotated Domains: __________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
__________________
Annotated Domains:
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 42..49
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 459 (161.6 bits), Expect = 1.7e-42, P = 1.7e-42
Identities = 83/98 (84%), Positives = 89/98 (90%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NPKVFFDMT G ++AGRIVMELYAD P TAENFRALCTGE+G+G+SGKPLHYKGS+F
Sbjct: 1 MVNPKVFFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP FMCQGGDFTAGNGTGGESIYG KF DENFVKK
Sbjct: 61 HRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKK 98
>gi|1345921|sp|P24525|CYPH_BRANA PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE)
(ROTAMASE) (CYCLOPHILIN) (CYCLOSPORIN A-BINDING PROTEIN)
Length = 171
Frame 1 hits (HSPs): _____________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 18..44
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 55..94
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 102..146
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 1..170
PFAM pro_isomerase: Cyclophilin type peptidyl 5..171
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 103..118
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 118..130
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 131..146
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..163
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 42..49
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 456 (160.5 bits), Expect = 3.6e-42, P = 3.6e-42
Identities = 82/98 (83%), Positives = 89/98 (90%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NPKV+FDMT G ++AGRIVMELYAD P TAENFRALCTGE+G+G+SGKPLHYKGS+F
Sbjct: 1 MVNPKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP FMCQGGDFTAGNGTGGESIYG KF DENFVKK
Sbjct: 61 HRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKK 98
>gi|11270324|pir||T50772 cyclophilin [imported] - Arabidopsis thaliana
>gi|2443757|gb|AAB71402.1| (AF020434) cyclophilin [Arabidopsis
thaliana]
Length = 174
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 174
0 50 100 150
Plus Strand HSPs:
Score = 450 (158.4 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 82/96 (85%), Positives = 88/96 (91%), Frame = +1
Query: 70 NPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 249
+PKVFFDMT GG AG+IVMELY D TP+TAENFRALCTGEKGVGRSGKPLH+KGSSFHR
Sbjct: 4 HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHR 63
Query: 250 VIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
VIP+FMCQGGDFT GNGTGGESIYGAKF DENF +K
Sbjct: 64 VIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERK 99
>gi|4803930|gb|AAD29803.1|AC006264_11 (AC006264) cyclophilin (CYP2)
[Arabidopsis thaliana]
Length = 174
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 174
0 50 100 150
Plus Strand HSPs:
Score = 450 (158.4 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 82/96 (85%), Positives = 88/96 (91%), Frame = +1
Query: 70 NPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 249
+PKVFFDMT GG AG+IVMELY D TP+TAENFRALCTGEKGVGRSGKPLH+KGSSFHR
Sbjct: 4 HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHR 63
Query: 250 VIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
VIP+FMCQGGDFT GNGTGGESIYGAKF DENF +K
Sbjct: 64 VIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERK 99
>gi|167138|gb|AAA62706.1| (M55018) cyclophilin [Brassica napus]
Length = 168
Frame 1 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | 168
0 50 100 150
Plus Strand HSPs:
Score = 447 (157.4 bits), Expect = 3.2e-41, P = 3.2e-41
Identities = 80/95 (84%), Positives = 87/95 (91%), Frame = +1
Query: 73 PKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHRV 252
PKV+FDMT G ++AGRIVMELYAD P TAENFRALCTGE+G+G+SGKPLHYKGS+FHRV
Sbjct: 1 PKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRV 60
Query: 253 IPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
IP FMCQGGDFTAGNGTGGESIYG KF DENFVKK
Sbjct: 61 IPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKK 95
>gi|1928939|gb|AAB51386.1| (U92087) stress responsive cyclophilin [Solanum
commersonii]
Length = 172
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
Plus Strand HSPs:
Score = 446 (157.0 bits), Expect = 4.1e-41, P = 4.1e-41
Identities = 82/99 (82%), Positives = 89/99 (89%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NP+VFFD+T GG AGR+VMEL+AD TP+TAENFRALCTGEKGVG+ GKPLHYKGS+F
Sbjct: 1 MANPRVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGE-SIYGAKFADENFVKK 357
HRVIP FMCQGGDFTAGNGTG E SIYGAKF DENFVKK
Sbjct: 61 HRVIPGFMCQGGDFTAGNGTGEEKSIYGAKFKDENFVKK 99
>gi|118104|sp|P21569|CYPH_MAIZE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE)
(ROTAMASE) (CYCLOPHILIN) (CYCLOSPORIN A-BINDING PROTEIN)
>gi|68408|pir||CSZM peptidylprolyl isomerase (EC 5.2.1.8) - maize
>gi|168461|gb|AAA63403.1| (M55021) cyclophilin [Zea mays]
>gi|829148|emb|CAA48638.1| (X68678) cyclophilin [Zea mays]
Length = 172
Frame 1 hits (HSPs): _____________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 18..44
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 55..94
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 102..146
PFAM pro_isomerase: Cyclophilin type peptidyl 5..172
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 103..118
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 118..130
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 131..146
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..166
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 42..49
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 445 (156.6 bits), Expect = 5.2e-41, P = 5.2e-41
Identities = 81/98 (82%), Positives = 87/98 (88%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NP+VFFDMT GG AGRIVMELYA+ P+TAENFRALCTGEKGVG+SGKPLHYKGS+F
Sbjct: 1 MANPRVFFDMTVGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP FMCQGGDFT GNGTGGESIYG KF DE FV+K
Sbjct: 61 HRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRK 98
>gi|9885808|gb|AAG01536.1|AF291180_1 (AF291180) cyclophilin CACYP1 [Capsicum
annuum]
Length = 155
Frame 1 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | | 155
0 50 100 150
Plus Strand HSPs:
Score = 443 (155.9 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 79/95 (83%), Positives = 88/95 (92%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NPKVFFD+T GGQ AGR+VME++A+ P+TAENFRALCTGEKGVGR GKPLHYKGS+F
Sbjct: 1 MANPKVFFDLTIGGQPAGRVVMEMFANDVPKTAENFRALCTGEKGVGRMGKPLHYKGSTF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENF 348
HRV+P FMCQGGDFTAGNGTGGESIYGAKFADE+F
Sbjct: 61 HRVMPGFMCQGGDFTAGNGTGGESIYGAKFADESF 95
>gi|461903|sp|P34790|CYP1_ARATH PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE)
(ROTAMASE) (CYCLOPHILIN) (CYCLOSPORIN A-BINDING PROTEIN)
>gi|7437320|pir||T06073 peptidylprolyl isomerase (EC 5.2.1.8) ROC1
- Arabidopsis thaliana >gi|405129|gb|AAA20047.1| (L14844)
cyclophilin [Arabidopsis thaliana] >gi|4490326|emb|CAB38608.1|
(AL035656) peptidylprolyl isomerase ROC1 [Arabidopsis thaliana]
>gi|7270856|emb|CAB80537.1| (AL161593) peptidylprolyl isomerase
ROC1 [Arabidopsis thaliana]
Length = 172
Frame 1 hits (HSPs): _____________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 18..44
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 55..94
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 102..146
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 1..170
PFAM pro_isomerase: Cyclophilin type peptidyl 5..172
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 103..118
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 118..130
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 131..146
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..166
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 440 (154.9 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 81/98 (82%), Positives = 87/98 (88%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M PKV+FDMT GQ AGRIVMELY D TPRTAENFRALCTGEKGVG +GKPLH+KGS F
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP+FMCQGGDFTAGNGTGGESIYG+KF DENF +K
Sbjct: 61 HRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERK 98
>gi|1076367|pir||A53422 peptidylprolyl isomerase (EC 5.2.1.8) ROC1 -
Arabidopsis thaliana
Length = 173
Frame 1 hits (HSPs): _____________________________
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | | 173
0 50 100 150
__________________
Annotated Domains:
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 440 (154.9 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 81/98 (82%), Positives = 87/98 (88%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M PKV+FDMT GQ AGRIVMELY D TPRTAENFRALCTGEKGVG +GKPLH+KGS F
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP+FMCQGGDFTAGNGTGGESIYG+KF DENF +K
Sbjct: 61 HRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERK 98
>gi|1480465|gb|AAC47233.1| (U47812) cyclophilin Ovcyp-2 [Onchocerca volvulus]
Length = 171
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 438 (154.2 bits), Expect = 2.9e-40, P = 2.9e-40
Identities = 78/98 (79%), Positives = 87/98 (88%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M P+VFFD+T GGQ +GRIVMEL+ D+ P+TAENFRALCTGEKGVG+SGKPLHYKGS F
Sbjct: 1 MTRPRVFFDITIGGQQSGRIVMELFNDIVPKTAENFRALCTGEKGVGKSGKPLHYKGSKF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP+FMCQGGDFT GNGTGGESIYG KF DENF +K
Sbjct: 61 HRVIPNFMCQGGDFTRGNGTGGESIYGEKFEDENFKEK 98
>gi|630464|pir||B53522 20k cyclophilin - Toxoplasma gondii (fragment)
>gi|436959|gb|AAA17998.1| (U04634) 20 kDa cyclophilin precursor
[Toxoplasma gondii]
Length = 347
Frame 2 hits (HSPs): __
Frame 1 hits (HSPs): _________________
Annotated Domains: ____
__________________________________________________
Database sequence: | | | | 347
0 150 300
__________________
Annotated Domains:
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 230..247
__________________
Plus Strand HSPs:
Score = 416 (146.4 bits), Expect = 3.2e-40, Sum P(2) = 3.2e-40
Identities = 79/110 (71%), Positives = 89/110 (80%), Frame = +1
Query: 31 VSFTLLFSA-ATMPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGR 207
V+F L S +TMPNP+VFFD++ + AGRI EL+ADV P+TAENFRALCTGEKG GR
Sbjct: 164 VAFCLYSSRLSTMPNPRVFFDISIDKKPAGRIEFELFADVVPKTAENFRALCTGEKGTGR 223
Query: 208 SGKPLHYKGSSFHRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
SGKPL+YKG FHR+IP FMCQGGDFT NGTGGESIYG KFADENF K
Sbjct: 224 SGKPLYYKGCPFHRIIPQFMCQGGDFTRMNGTGGESIYGEKFADENFSYK 273
Score = 38 (13.4 bits), Expect = 3.2e-40, Sum P(2) = 3.2e-40
Identities = 7/7 (100%), Positives = 7/7 (100%), Frame = +2
Query: 356 KFADENF 376
KFADENF
Sbjct: 264 KFADENF 270
>gi|1084454|pir||S48018 peptidylprolyl isomerase (EC 5.2.1.8) Cyp1 - rice
>gi|600765|gb|AAA57044.1| (L29471) cyclophilin 1 [Oryza sativa]
Length = 179
Frame 2 hits (HSPs): __
Frame 1 hits (HSPs): __________________________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | 179
0 50 100 150
__________________
Annotated Domains:
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 3..172
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 57..74
__________________
Plus Strand HSPs:
Score = 414 (145.7 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 73/93 (78%), Positives = 82/93 (88%), Frame = +1
Query: 70 NPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 249
NPKVFFD+ G AGR+VMEL+AD P+TAENFR LCTGEKG+G SGKPLHYKGS+FHR
Sbjct: 5 NPKVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHR 64
Query: 250 VIPSFMCQGGDFTAGNGTGGESIYGAKFADENF 348
+IP+FMCQGGDFT GNGTGGESIYG +FADENF
Sbjct: 65 IIPNFMCQGGDFTRGNGTGGESIYGDRFADENF 97
Score = 35 (12.3 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +2
Query: 356 KFADENF 376
+FADENF
Sbjct: 91 RFADENF 97
>gi|1084455|pir||S48017 peptidylprolyl isomerase (EC 5.2.1.8) Cyp2 - rice
>gi|600767|gb|AAA57045.1| (L29469) cyclophilin 2 [Oryza sativa]
Length = 172
Frame 1 hits (HSPs): ____________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
__________________
Annotated Domains:
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 1..170
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 42..49
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 428 (150.7 bits), Expect = 3.3e-39, P = 3.3e-39
Identities = 80/95 (84%), Positives = 83/95 (87%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M N +VFFDMT GG AGRIVMELYA PRTAENFRALCTGEKGVG+SGKPLHYKGS+F
Sbjct: 1 MSNTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENF 348
HRVIP FMCQGGDFT GNGTGGESIYG KFADE F
Sbjct: 61 HRVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVF 95
>gi|600769|gb|AAA57046.1| (L29470) cyclophilin 2 [Oryza sativa]
Length = 172
Frame 1 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
Plus Strand HSPs:
Score = 428 (150.7 bits), Expect = 3.3e-39, P = 3.3e-39
Identities = 80/95 (84%), Positives = 83/95 (87%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M N +VFFDMT GG AGRIVMELYA PRTAENFRALCTGEKGVG+SGKPLHYKGS+F
Sbjct: 1 MSNTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENF 348
HRVIP FMCQGGDFT GNGTGGESIYG KFADE F
Sbjct: 61 HRVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVF 95
>gi|7437318|pir||T07950 peptidylprolyl isomerase (EC 5.2.1.8) 1 - Chlamydomonas
reinhardtii >gi|2959712|gb|AAC05639.1| (AF052206) cyclophilin 1
[Chlamydomonas reinhardtii]
Length = 172
Frame 1 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
Plus Strand HSPs:
Score = 427 (150.3 bits), Expect = 4.2e-39, P = 4.2e-39
Identities = 78/95 (82%), Positives = 83/95 (87%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
MPNP VFFD+T G GRI MELYAD P+TAENFRALCTGEKGVGRSGKPLH+KGS+F
Sbjct: 1 MPNPIVFFDITADGAPVGRIEMELYADDVPKTAENFRALCTGEKGVGRSGKPLHFKGSTF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENF 348
HRVIP+FMCQGGDFT GNGTGGESIYG KF DENF
Sbjct: 61 HRVIPNFMCQGGDFTRGNGTGGESIYGEKFPDENF 95
>gi|1076366|pir||S50141 peptidylprolyl isomerase (EC 5.2.1.8) - Arabidopsis
thaliana >gi|460968|gb|AAA66197.1| (U07276) peptidyl-prolyl
cis-trans isomerase [Arabidopsis thaliana]
>gi|992643|gb|AAA75512.1| (U32186) cyclophilin [Arabidopsis
thaliana] >gi|5123704|emb|CAB45448.1| (AL079347) peptidylprolyl
isomerase (cyclophilin) [Arabidopsis thaliana]
>gi|7270438|emb|CAB80204.1| (AL161586) peptidylprolyl isomerase
(cyclophilin) [Arabidopsis thaliana] >gi|1091580|prf||2021266A
peptidyl-Pro cis-trans isomerase [Arabidopsis thaliana]
Length = 172
Frame 1 hits (HSPs): _____________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
__________________
Annotated Domains:
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 1..170
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 424 (149.3 bits), Expect = 8.8e-39, P = 8.8e-39
Identities = 77/98 (78%), Positives = 84/98 (85%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NP+VFFDM+ G GRI MEL+AD TP TAENFRALCTGEKG+G+ GKPLH+KGS F
Sbjct: 1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP FMCQGGDFTA NGTGGESIYGAKF DENF+KK
Sbjct: 61 HRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKK 98
>gi|227879|prf||1713247A cyclophilin [Dictyostelium discoideum]
Length = 179
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 179
0 50 100 150
Plus Strand HSPs:
Score = 423 (148.9 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 78/100 (78%), Positives = 87/100 (87%), Frame = +1
Query: 61 TMP-NPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGS 237
T P NP+VFFD+T GG AG++VMELYA+ P+TAENFRALCTGEKG+G+SGKPL YKGS
Sbjct: 7 TSPENPRVFFDITIGGVEAGKVVMELYANTVPKTAENFRALCTGEKGIGKSGKPLSYKGS 66
Query: 238 SFHRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
SFHRVI +FMCQGGDFT GNGTGGESIYG KFADENF K
Sbjct: 67 SFHRVITNFMCQGGDFTMGNGTGGESIYGNKFADENFKLK 106
>gi|7649161|gb|AAF65770.1|AF242312_1 (AF242312) cyclophilin [Euphorbia esula]
Length = 160
Frame 1 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | 160
0 50 100 150
Plus Strand HSPs:
Score = 423 (148.9 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 78/86 (90%), Positives = 80/86 (93%), Frame = +1
Query: 100 GGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHRVIPSFMCQGG 279
GG GRIVMELYAD TPRTAENFRALCTGEKGVGRS KPLH+KGSSFHRVIP FMCQGG
Sbjct: 1 GGAPVGRIVMELYADTTPRTAENFRALCTGEKGVGRSRKPLHFKGSSFHRVIPGFMCQGG 60
Query: 280 DFTAGNGTGGESIYGAKFADENFVKK 357
DFTAGNGTGGESIYGAKFADENF+KK
Sbjct: 61 DFTAGNGTGGESIYGAKFADENFIKK 86
>gi|11270314|pir||T50767 cyclophilin [imported] - Arabidopsis thaliana
>gi|939726|gb|AAA74096.1| (U31370) cyclophilin [Arabidopsis
thaliana]
Length = 176
Frame 1 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | 176
0 50 100 150
Plus Strand HSPs:
Score = 421 (148.2 bits), Expect = 1.8e-38, P = 1.8e-38
Identities = 75/98 (76%), Positives = 84/98 (85%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NPKVFFD+ G AGR+VMEL+ADVTPRTA NFRALCTGE G+G++GK LHYKGS+F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HR+IP FMCQGGDFT GNGTGGESIYG+KF DENF K
Sbjct: 61 HRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLK 98
>gi|2129568|pir||S71220 peptidylprolyl isomerase (EC 5.2.1.8) ROC2 -
Arabidopsis thaliana >gi|1305457|gb|AAB96833.1| (U40400) cytosolic
cyclophilin [Arabidopsis thaliana]
Length = 176
Frame 1 hits (HSPs): ____________________________
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | | 176
0 50 100 150
__________________
Annotated Domains:
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 421 (148.2 bits), Expect = 1.8e-38, P = 1.8e-38
Identities = 75/98 (76%), Positives = 84/98 (85%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NPKVFFD+ G AGR+VMEL+ADVTPRTA NFRALCTGE G+G++GK LHYKGS+F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HR+IP FMCQGGDFT GNGTGGESIYG+KF DENF K
Sbjct: 61 HRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLK 98
>gi|11270362|pir||T47724 peptidylprolyl isomerase (EC 5.2.1.8) ROC2 -
Arabidopsis thaliana >gi|7572905|emb|CAB87406.1| (AL163763)
peptidylprolyl isomerase [Arabidopsis thaliana]
Length = 176
Frame 1 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | 176
0 50 100 150
Plus Strand HSPs:
Score = 421 (148.2 bits), Expect = 1.8e-38, P = 1.8e-38
Identities = 75/98 (76%), Positives = 84/98 (85%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M NPKVFFD+ G AGR+VMEL+ADVTPRTA NFRALCTGE G+G++GK LHYKGS+F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HR+IP FMCQGGDFT GNGTGGESIYG+KF DENF K
Sbjct: 61 HRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLK 98
>gi|863016|gb|AAC47125.1| (U27559) cyclophilin [Caenorhabditis elegans]
Length = 171
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 415 (146.1 bits), Expect = 7.9e-38, P = 7.9e-38
Identities = 74/98 (75%), Positives = 83/98 (84%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M P+VFFD+T G+ GRIVMELY D+ P+TAENFRALCTGEKGVG+SGKPLH+KGS F
Sbjct: 1 MSRPRVFFDITTAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HR+IP FM QGGDFT GNGTGGESIYG KF DENF +K
Sbjct: 61 HRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEK 98
>gi|1480463|gb|AAC47232.1| (U47813) cyclophilin Dicyp-2 [Dirofilaria immitis]
Length = 171
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 414 (145.7 bits), Expect = 1.0e-37, P = 1.0e-37
Identities = 75/98 (76%), Positives = 84/98 (85%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M PKV+FD+T G +AGRIVMEL+AD+ P+TAENFR LCTGE+GVGRSGK LHYKGS F
Sbjct: 1 MSRPKVYFDITIDGSNAGRIVMELFADIVPKTAENFRCLCTGERGVGRSGKKLHYKGSKF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP+FM QGGDFT GNGTGGESIYG KF DENF +K
Sbjct: 61 HRVIPNFMLQGGDFTRGNGTGGESIYGEKFPDENFQEK 98
>gi|10720390|sp|P52015|CYP7_CAEEL PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 7
(PPIASE) (ROTAMASE) (CYCLOPHILIN-7) >gi|7510460|pir||T27371
peptidylprolyl isomerase (EC 5.2.1.8) Y75B12B.2 [similarity] -
Caenorhabditis elegans >gi|3881310|emb|CAA21760.1| (AL032663)
predicted using Genefinder~contains similarity to Pfam domain:
PF00160 (Cyclophilin type peptidyl-prolyl cis-trans isomerase),
Score=376.1, E-value=1.1e-109, N=1~cDNA EST yk106a10.3 comes from
this gene; cDNA EST yk96h11.3 comes from this ge>
Length = 171
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 414 (145.7 bits), Expect = 1.0e-37, P = 1.0e-37
Identities = 74/98 (75%), Positives = 83/98 (84%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M P+VFFD+T G+ GRIVMELY D+ P+TAENFRALCTGEKGVG+SGKPLH+KGS F
Sbjct: 1 MSRPRVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HR+IP FM QGGDFT GNGTGGESIYG KF DENF +K
Sbjct: 61 HRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEK 98
>gi|1480461|gb|AAC47231.1| (U47811) cyclophilin Bmcyp-2 [Brugia malayi]
Length = 171
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 411 (144.7 bits), Expect = 2.1e-37, P = 2.1e-37
Identities = 74/98 (75%), Positives = 84/98 (85%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M PKVFFD+T G +AGRIVMEL+AD+ P+TAENFR LCTGE+G+GRSGK LHYKGS F
Sbjct: 1 MSRPKVFFDITIDGSNAGRIVMELFADIVPKTAENFRCLCTGERGMGRSGKKLHYKGSKF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HRVIP+FM QGGDFT GNGTGG+SIYG KF DENF +K
Sbjct: 61 HRVIPNFMLQGGDFTRGNGTGGQSIYGEKFPDENFQEK 98
>gi|9558358|emb|CAC00484.1| (AJ292563) peptidyl-prolyl cis-trans isomerase
[Neurospora crassa]
Length = 375
Frame 1 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | 375
0 150 300
Plus Strand HSPs:
Score = 409 (144.0 bits), Expect = 3.4e-37, P = 3.4e-37
Identities = 75/94 (79%), Positives = 83/94 (88%), Frame = +1
Query: 76 KVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHRVI 255
+VFFD+T GG++AGRIV ELY D+ P+TAENFRALCTGEKGVG+ GKPLHYKGS+FHRVI
Sbjct: 13 RVFFDITIGGKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVI 72
Query: 256 PSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
FM QGGDFTAGNGTGGESIYGAKF DENF K
Sbjct: 73 KQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLK 106
>gi|1706248|sp|P52011|CYP3_CAEEL PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 (PPIASE)
(ROTAMASE) (CYCLOPHILIN-3) >gi|7510463|pir||T27373 peptidylprolyl
isomerase (EC 5.2.1.8) Y75B12B.5 [similarity] - Caenorhabditis
elegans >gi|9257006|pdb|1DYW|A Chain A, Biochemical And Structural
Characterization Of A Divergent Loop Cyclophilin From
Caenorhabditis Elegans >gi|11514370|pdb|1E3B|A Chain A, Cyclophilin
3 From C.Elegans Complexed With Aup(Et)3 >gi|1109668|gb|AAC47129.1|
(U31077) cyclophilin isoform 3 [Caenorhabditis elegans]
>gi|3881312|emb|CAA21762.1| (AL032663) predicted using
Genefinder~contains similarity to Pfam domain: PF00160 (Cyclophilin
type peptidyl-prolyl cis-trans isomerase), Score=391.4,
E-value=2.8e-114, N=1~cDNA EST CEMSB85F comes from this gene; cDNA
EST CEMSB85FB comes from this gene>
Length = 173
Frame 1 hits (HSPs): _____________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 173
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 18..44
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 55..94
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 102..146
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 1..170
PFAM pro_isomerase: Cyclophilin type peptidyl 5..172
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 103..118
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 118..130
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 131..146
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..166
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 42..49
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 407 (143.3 bits), Expect = 5.5e-37, P = 5.5e-37
Identities = 73/98 (74%), Positives = 84/98 (85%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
M KVFFD+T GG+++GRIVMELY DV P+TA NFRALCTGE G+G+SGKPLH+KGS F
Sbjct: 1 MSRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HR+IP+FM QGGDFT GNGTGGESIYG KF DENF +K
Sbjct: 61 HRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEK 98
>gi|7511185|pir||T27882 peptidylprolyl isomerase (EC 5.2.1.8) ZK520.5
[similarity] - Caenorhabditis elegans >gi|3881755|emb|CAB07303.1|
(Z92822) contains similarity to Pfam domain: PF00160 (Cyclophilin
type peptidyl-prolyl cis-trans isomerase), Score=379.0,
E-value=1.6e-110, N=1~cDNA EST yk123d9.3 comes from this gene; cDNA
EST yk123d9.5 comes from this gene~cDNA EST yk145f4.5 comes fr>
Length = 172
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
Plus Strand HSPs:
Score = 403 (141.9 bits), Expect = 1.5e-36, P = 1.5e-36
Identities = 73/98 (74%), Positives = 82/98 (83%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
MP KVFFD+T GG+ GRIVMELY D+ P+TAENFRALCTGEKG G+SGK LH+KGS F
Sbjct: 1 MPRVKVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HR+IP FM QGGDFT GNGTGGESI+G KF DENF +K
Sbjct: 61 HRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEK 98
>gi|6066431|emb|CAB58298.1| (AL121851) cyclophilin [Leishmania major]
Length = 295
Frame 1 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | | | 295
0 50 100 150 200 250
Plus Strand HSPs:
Score = 402 (141.5 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 75/99 (75%), Positives = 82/99 (82%), Frame = +1
Query: 70 NPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 249
NPKVFFD++ ++AGRIVMELYAD P+TAENFRALCTGEKG GRSGKPLHYK S FHR
Sbjct: 23 NPKVFFDISIDNKAAGRIVMELYADTVPKTAENFRALCTGEKGKGRSGKPLHYKSSVFHR 82
Query: 250 VIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKKVRR 366
VIP+FM QGGDFT GNGTGGESIYG F DE+F K R
Sbjct: 83 VIPNFMIQGGDFTRGNGTGGESIYGTTFRDESFSGKAGR 121
>gi|7437314|pir||S74880 peptidylprolyl isomerase (EC 5.2.1.8) - Synechocystis
sp. (strain PCC 6803) >gi|1652923|dbj|BAA17841.1| (D90909)
peptidyl-prolyl cis-trans isomerase [Synechocystis sp.]
Length = 171
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 401 (141.2 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 74/94 (78%), Positives = 82/94 (87%), Frame = +1
Query: 76 KVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHRVI 255
KVFFD+T G +AGRIVMEL+ +VTP+TAENFRALCTGEKGVG++GKPLH+KGS FHRVI
Sbjct: 4 KVFFDITIGSDTAGRIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVI 63
Query: 256 PSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
FM QGGDFT GNGTGGESIYG KFADENF K
Sbjct: 64 TDFMAQGGDFTRGNGTGGESIYGEKFADENFQLK 97
>gi|11357239|pir||T49181 cyclophylin-like protein - Arabidopsis thaliana
>gi|7573323|emb|CAB87793.1| (AL163818) cyclophylin-like protein
[Arabidopsis thaliana]
Length = 570
Frame 2 hits (HSPs): _
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | 570
0 150 300 450
Plus Strand HSPs:
Score = 377 (132.7 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 70/94 (74%), Positives = 79/94 (84%), Frame = +1
Query: 70 NPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRS-GKPLHYKGSSFH 246
NP VF D++ GG RIV+EL+ADV P+TAENFRALCTGE GVG+S GKPLH+KGSSFH
Sbjct: 6 NPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFH 65
Query: 247 RVIPSFMCQGGDFTAGNGTGGESIYGAKFADENF 348
RVI FM QGGDF+ GNGTGGESIYG KF+DENF
Sbjct: 66 RVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENF 99
Score = 35 (12.3 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 6/7 (85%), Positives = 7/7 (100%), Frame = +2
Query: 356 KFADENF 376
KF+DENF
Sbjct: 93 KFSDENF 99
>gi|544125|sp|P35627|CYP2_ARATH PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE)
(ROTAMASE) (CYCLOPHILIN) (CYCLOSPORIN A-BINDING PROTEIN)
>gi|81651|pir||S22496 peptidylprolyl isomerase (EC 5.2.1.8) -
Arabidopsis thaliana >gi|16248|emb|CAA45161.1| (X63616)
cyclophorin-like protein [Arabidopsis thaliana]
Length = 169
Frame 1 hits (HSPs): ___________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 169
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 15..41
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 52..91
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 99..143
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 1..168
PFAM pro_isomerase: Cyclophilin type peptidyl 3..169
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 21..36
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 57..69
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 100..115
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 115..127
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 128..143
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 20..59
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 61..164
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 52..69
__________________
Plus Strand HSPs:
Score = 384 (135.2 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 72/92 (78%), Positives = 79/92 (85%), Frame = +1
Query: 82 FFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHRVIPS 261
FFDMT GGQ AGRI+MEL+ DV P+TAENFRALCTGEKG+G SGK + Y+GS FHRVIP
Sbjct: 5 FFDMTIGGQPAGRIIMELFPDV-PKTAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPK 63
Query: 262 FMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
FM QGGDFT GNG GGESIYGAKFADENF+ K
Sbjct: 64 FMLQGGDFTLGNGRGGESIYGAKFADENFIHK 95
>gi|11270326|pir||T50837 cyclophilin CYP5 [imported] - Arabidopsis thaliana
>gi|2443755|gb|AAB71401.1| (AF020433) cyclophilin [Arabidopsis
thaliana]
Length = 201
Frame 1 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | || 201
0 50 100 150 200
Plus Strand HSPs:
Score = 384 (135.2 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 70/94 (74%), Positives = 79/94 (84%), Frame = +1
Query: 76 KVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHRVI 255
KV+FD+ G+SAGR+V+ L+ P+TAENFRALCTGEKGVG+SGKPLHYKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 256 PSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
PSFM QGGDFT GNG GGESIYG KFADENF K
Sbjct: 93 PSFMIQGGDFTHGNGMGGESIYGQKFADENFKLK 126
>gi|7437323|pir||T02489 peptidylprolyl isomerase (EC 5.2.1.8) F23F1.12 -
Arabidopsis thaliana >gi|3420055|gb|AAC31856.1| (AC004680)
cyclophilin [Arabidopsis thaliana]
Length = 201
Frame 1 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | || 201
0 50 100 150 200
Plus Strand HSPs:
Score = 384 (135.2 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 70/94 (74%), Positives = 79/94 (84%), Frame = +1
Query: 76 KVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHRVI 255
KV+FD+ G+SAGR+V+ L+ P+TAENFRALCTGEKGVG+SGKPLHYKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 256 PSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
PSFM QGGDFT GNG GGESIYG KFADENF K
Sbjct: 93 PSFMIQGGDFTHGNGMGGESIYGQKFADENFKLK 126
>gi|1706247|sp|P52010|CYP2_CAEEL PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 (PPIASE)
(ROTAMASE) (CYCLOPHILIN-2) >gi|1109674|gb|AAC47127.1| (U34354)
cyclophilin isoform 2 (cyp-2) [Caenorhabditis elegans]
Length = 171
Frame 1 hits (HSPs): _____________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 18..44
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 55..94
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 101..145
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 1..169
PFAM pro_isomerase: Cyclophilin type peptidyl 5..171
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 102..117
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 117..129
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 130..145
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..165
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 42..49
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 382 (134.5 bits), Expect = 2.5e-34, P = 2.5e-34
Identities = 71/98 (72%), Positives = 80/98 (81%), Frame = +1
Query: 64 MPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 243
MP KVF D+T GG+ GRIVMELY D+ P+TAENFRALCTGEKG G+SGK LH+KGS F
Sbjct: 1 MPRVKVFIDITIGGKKGGRIVMELYNDIAPKTAENFRALCTGEKGKGKSGKKLHFKGSKF 60
Query: 244 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
HR+IP FM QGGDFT GNGTG ESI+G KF DENF +K
Sbjct: 61 HRIIPEFMIQGGDFTEGNGTG-ESIHGEKFDDENFKEK 97
>gi|3550686|emb|CAA08988.1| (AJ010066) cyclophilin (TcCYP) [Trypanosoma cruzi]
Length = 258
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | | | 258
0 50 100 150 200 250
Plus Strand HSPs:
Score = 378 (133.1 bits), Expect = 6.6e-34, P = 6.6e-34
Identities = 70/96 (72%), Positives = 77/96 (80%), Frame = +1
Query: 70 NPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 249
NPKVFFD++ + +GRI MELYAD P+TAENFRALCTGEKG G+SGKPLHYKG FHR
Sbjct: 23 NPKVFFDISIDNKPSGRIKMELYADTVPKTAENFRALCTGEKGRGKSGKPLHYKGCVFHR 82
Query: 250 VIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
VIP FM QGGD T GNGTGGESIYG F DE+F K
Sbjct: 83 VIPGFMIQGGDITRGNGTGGESIYGMNFRDESFSGK 118
>gi|1706246|sp|P52009|CYP1_CAEEL PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 (PPIASE)
(ROTAMASE) (CYCLOPHILIN-1) >gi|7510030|pir||T27034 peptidylprolyl
isomerase (EC 5.2.1.8) Y49A3A.5 [similarity] - Caenorhabditis
elegans >gi|1146430|gb|AAC47116.1| (U30943) cyclophilin-1
[Caenorhabditis elegans] >gi|4008437|emb|CAA22075.1| (AL033512)
predicted using Genefinder~contains similarity to Pfam domain:
PF00160 (Cyclophilin type peptidyl-prolyl cis-trans isomerase),
Score=395.9, E-value=1.3e-115, N=1~cDNA EST EMBL:T01876 comes from
this gene~cDNA EST yk100e4.5 comes from this ge>
Length = 192
Frame 1 hits (HSPs): _____________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 192
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 36..62
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 73..112
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 120..164
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 19..188
PFAM pro_isomerase: Cyclophilin type peptidyl 23..190
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 42..57
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 78..90
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 121..136
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 136..148
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 149..164
PRODOM PD071495: CYP1_CAEEL 1..38
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 40..80
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 82..184
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 73..90
__________________
Plus Strand HSPs:
Score = 374 (131.7 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 71/110 (64%), Positives = 84/110 (76%), Frame = +1
Query: 19 SSSVVSFTLLFSAATMPNPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKG 198
+SS+ +L F++ PKVFFD++ G + AGR+ MEL+ DV P+TAENFRALCTGEKG
Sbjct: 7 ASSLAGQSLRFASQ---RPKVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKG 63
Query: 199 VGRSGKPLHYKGSSFHRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENF 348
VG G LH+KGS FHR+IP FM QGGDFT NGTGGESIYG KF DENF
Sbjct: 64 VGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENF 113
>gi|11270328|pir||T50838 cyclophilin ROC7 [imported] - Arabidopsis thaliana
>gi|6180043|gb|AAF05760.1|AF192490_1 (AF192490) cyclophilin
[Arabidopsis thaliana] >gi|8843791|dbj|BAA97339.1| (AB020755)
cyclophilin [Arabidopsis thaliana]
Length = 204
Frame 1 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | | | 204
0 50 100 150 200
Plus Strand HSPs:
Score = 374 (131.7 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 68/94 (72%), Positives = 78/94 (82%), Frame = +1
Query: 76 KVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHRVI 255
KV+FD+ G++AGRIVM L+ P+T ENFRALCTGEKG+G++GK LHYKGSSFHR+I
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 256 PSFMCQGGDFTAGNGTGGESIYGAKFADENFVKK 357
PSFM QGGDFT GNG GGESIYG KFADENF K
Sbjct: 96 PSFMLQGGDFTHGNGMGGESIYGEKFADENFKLK 129
>gi|4826932 ref|NP_005029.1| peptidylprolyl isomerase D (cyclophilin D); hCyP40
[Homo sapiens] >gi|729274|sp|Q08752|CYP4_HUMAN 40 KDA
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE) (ROTAMASE)
(CYCLOPHILIN-40) (CYP-40) (CYCLOPHILIN-RELATED PROTEIN)
>gi|422797|pir||A45981 peptidylprolyl isomerase (EC 5.2.1.8) CyP-40
- human >gi|348910|gb|AAA35731.1| (L11667) cyclophilin-40 [Homo
sapiens] >gi|1769812|dbj|BAA09923.1| (D63861) cyclophilin 40 [Homo
sapiens]
Length = 370
Frame 1 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | 370
0 150 300
Plus Strand HSPs:
Score = 372 (131.0 bits), Expect = 2.8e-33, P = 2.8e-33
Identities = 69/103 (66%), Positives = 81/103 (78%), Frame = +1
Query: 70 NPKVFFDMTXGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRS-GKPLHYKGSSFH 246
NP+VFFD+ GG+ GRIV+EL+AD+ P+TAENFRALCTGEKG+G + GKPLH+KG FH
Sbjct: 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFH 74
Query: 247 RVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKKVRRREL 375
R+I FM QGGDF+ NGTGGESIYG KF DENF K R L
Sbjct: 75 RIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGL 117
WARNING: HSPs involving 374 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.97
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.344 0.151 0.529
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.344 0.142 0.467
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.320 0.137 0.405
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.342 0.148 0.486
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.359 0.157 0.562
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.326 0.141 0.416
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 127 125 10. 72 3 12 22 0.10 33
29 0.11 35
+2 0 127 126 10. 72 3 12 22 0.10 33
29 0.12 35
+1 0 127 125 10. 72 3 12 22 0.10 33
29 0.11 35
-1 0 127 126 10. 72 3 12 22 0.10 33
29 0.12 35
-2 0 127 125 10. 72 3 12 22 0.10 33
29 0.11 35
-3 0 127 125 10. 72 3 12 22 0.10 33
29 0.11 35
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 424
No. of states in DFA: 585 (58 KB)
Total size of DFA: 141 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 141.93u 1.16s 143.09t Elapsed: 00:00:24
Total cpu time: 141.98u 1.18s 143.16t Elapsed: 00:00:25
Start: Wed Feb 6 11:57:23 2002 End: Wed Feb 6 11:57:48 2002
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000