Chromosome Y.pestis CO92 (AL590842) ORF Forward Primer (FP) FP_Tm FP_GC Reverse Primer (RP) RP_Tm RP_GC PCR fragment size(bp) CO92_gene CO92_product CO92_function1 CO92_function2 CO92_function3 pathway alternativename EC number YPO0001 GGTAGTGCTGAATATGTTGCTGAACATTTAGCG 70 42 TTAGAGTAAATTAATCCAATCTTTGACCCAAATCT 66 29 420 none putative flavoprotein Other 5.I Unknown [1066] none YPO0002 ATGAGTGAAATTTATCAGATCGATAATCTCGA 65 31 TTAAGGAACGATCGTACGCATGATAGGGTT 70 43 462 asnC regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0003 AAAAACAATTTATCCAAAAACAACAACAAATCAGC 68 26 TTACAGCAGGCCATCAACTTTCTCGC 70 50 255 asnA aspartate-ammonia ligase Amino acid biosynthesis 1.D.2 Aspartate family [24] Alanine and aspartate metabolism. Cyanoamino acid metabolism. Nitrogen metabolism none EC:6.3.1.1 YPO0004 ATGCTCAGTCTGGCAACACTGGATATGC 70 50 GTTTCCAGCGGCGTATCAAACGGCTTT 73 52 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0005 AAAGAATATCTCGCTTAAGTCATGCCCTTGAAAGT 70 37 GTCCACTGTGTTTTTGTTGTTGAAATTTACGTTG 70 35 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0006 ATTTATCCGCGGTGACTTTGGCTGCAATC 74 48 TAACCCTATTGGGTGGGATCTCAAATTGATCTGGT 74 43 255 kup trkD potassium transport protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO0007 AAAAAGGTGTATTACTGAACGCTGATATTTCCGC 70 38 TTAGAAGGTTACGCCGGAGCCGAG 70 58 420 none ribose permease Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0008 ATGGAAACAGGTAAGCTGGTGGTGTTGG 71 50 TTACACTCGTTCTTGTAAGAAGCTATCAATTTCGG 69 37 255 rbsK ribokinase Degradation 1.A.1 Carbon compounds [66] Pentose phosphate pathway none EC:2.7.1.15 YPO0009 ATGATAAAATCTGCGCGCAGTATGGC 69 46 TTAAACATTATTTTTCACCTGTGGGGCTACTTTTT 69 31 255 none putative membrane transport protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0010 ATGCAACTAAATACCCAACAGCAAGCCG 70 46 TCAGTCTACCGTTTTTAATAGCACCTGACAGG 69 44 690 16S_rRNA 23S_rRNA 5SrRNA putative GntR-famly transcriptional regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO0012 ATGATGAACTACAAGTCACCGCCGCTATTAG 69 45 CCTTACTTCAAAACTAATATTTTCTAACCAGGTGC 66 34 534 mobB probable molybdopterin-guanine dinucleotidebiosynthesis protein B Biosynthesis of cofactors; prosthetic groups and carriers 1.G.4 Molybdopterin [9] none YPO0013 ATGCAACCCAATATTACAGGTGTTATTCTCGC 70 41 TCATTGGCCTCTTCTCTTTTGTTCCCAT 70 43 588 mobA mob chlB nar molybdopterin-guanine dinucleotide biosynthesisprotein A Biosynthesis of cofactors; prosthetic groups and carriers 1.G.4 Molybdopterin [9] none YPO0013a ATGAAATGCCATCGTGTTAATGA 61 35 CTAATCTTTAATAATGCCACGAGCA 61 36 270 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0014 ATGAAGAAGATTTTAAAACAGCACTGTTGCGTG 70 36 TTAGTACATTGGCATCAGCTGCAAAGGG 70 46 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0015 ATGAAAAATGTATGGTTAGCACTCGTTGGTATCG 70 38 TTATTTTTGAGTCAGCAGGAATGTAACAACATCC 69 35 624 dsbA secreted thiol:disulfide interchange proteinDsbA Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO0017 TGCGATGTATGGCGTTCTGAACATG 69 48 GTAGCCCTTCGGTGCAATAAAGGCC 70 56 255 polA resA DNA polymerase I Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] DNA polymerase none EC:2.7.7.7 YPO0019 CTATAACTATCATATGACTCACTTCGTCATCAGTG 65 37 TTACTCGCCTTCGCCGTCAAACTCT 69 52 651 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0020 ATGAAGCAGCCAAATAAAGCACCACG 69 46 TTAAAATGTATCTTTTGGATTACCACGTTTCAGT 66 29 567 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0021 ATGTCTGAGCACGCTATAGTTTGGGATCTATCC 70 45 TCAGATTACACGTGAGAATTGCTGCTTGC 70 45 255 hemN oxygen-independent coproporphyrinogen IIIoxidase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] none YPO0022 CAACGAGGGATAGTCTGGATCGTCGATGA 73 52 CTACTCCATCCCCAACTCTTTCAACTTCCG 71 50 255 ntrC glnG glnT nitrogen regulation protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0023 ATGGCAACAGGCACGCTGCC 71 65 TCACTGGCGAATAGGCAGGTAAACCG 71 54 255 ntrB glnl glnR Two component regulatory protein involved innitrogen assimilation Broad regulatory functions 2 Broad regulatory functions [235] none YPO0024 ATGTCCGCTGAACATGTTTTGACGATG 70 44 TTAAACGCTGTAATACAGTTCGAACTCAACAGGA 69 38 255 glnA glutamine synthetase Amino acid biosynthesis 1.D.1 Glutamate family [19] Glutamate metabolism. Peptidoglycan biosynthesis.Nitrogen metabolism none EC:6.3.1.2 YPO0025 GTGCATACTGATTATCAGCAGACC 60 46 TCATCTCAGGATCCATGCCA 63 50 159 none possible membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0026 GACCATGGGAAAACTACCCTGGTTGATAAGTTGC 73 47 CTTCTCTTGGACCACGTCCAGCACGC 74 62 255 bipA typA putative GTPase Cell processes 4.I Pathogenicity [38] none YPO0027 ATGCTGTATATCTTTGATCTAGGGAATGTGATTGT 67 34 AGGAAAAATAAGTAGGAATAATTTGTCTATCGGTG 65 31 591 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0028 GTGCTAACCCTTATCACGCTGGCCC 71 60 TTACATCTCCGGACTCTGGGTGGTG 69 56 255 rbn ribonuclease BN Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] none YPO0029 ATGATTGCGTTGATTCAACGGGC 69 48 CTAGACTTGCAACCAGAAAGTTACCGGACC 69 50 438 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0032 ATGTATCACTTGCGTGTGCCCATAACAG 69 46 TTAATTAGCCATGTCATCGCCTGCAGC 71 48 255 none conserved membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0033 GCTGCTAACGTTATTGCTGCTGTTTGCGCT 74 50 ATTGATTTGTTGCCCGTTGCTGTCTATTGCC 74 45 255 none possible exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0034 ATGCCCCCTTTGCCGATCTGG 71 62 CTATTTTTCTTGTGGGAAGAGTAAGTTAAGTACGA 65 34 255 none putative membrane permease Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0035 ATGTTTCATCTCGATACCTATGGCACGCTAG 69 45 TCACCCCGTTACGGCTGGAAATATTG 70 50 255 gltS gltC sodium/glutamate symport carrier protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0036 AGTCAGGCTGGAAAACTCGCCAAGA 70 52 GGCAACCAGCGTTCTATCAATGCCT 69 52 255 recG ATP-dependent DNA helicase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] Starch and sucrose metabolism.Folate biosynthesis none EC:3.6.1.- YPO0037 ATGAATCCTCAACGCTATGCGCG 69 52 TTAAGACTCCGTGGCTTGCATGGC 70 54 693 trmH spoU tRNA (guanosine-2'-O-)-methyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] none YPO0038 TTCAACGTTACCTGCCAGAGGAGCA 69 52 TTCCGAGTGGTCAGGCGAATAAAGG 69 52 255 spoT guanosine-3';5'-bisbis(diphosphate)3'-pyrophosphydrolase Broad regulatory functions 2 Broad regulatory functions [235] Purine metabolism none EC:3.1.7.2 YPO0039 ATGGCACGCGTAACTGTTCAAGACG 70 52 TTAACGACGACCTTCAGCAATGGCG 71 52 276 rpoZ DNA-directed RNA polymerase; omega chain Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] RNA polymerase none EC:2.7.7.6 YPO0040 ATGGTTCAAGGTACGCTATACATAGTTTCCGC 69 44 TCAGTCCGCCAATAATTTGCTGATTAAAGC 70 40 624 gmk spoR guanylate kinase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism none EC:2.7.4.8 YPO0041 CCTATTAATATCTAACACCATAGTGGTGGGCGGTG 71 46 TTACTCTGTGAGCTCGAACCCAACAACTTTC 70 45 255 none putative DNA ligase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0042 TGCTACTCAGTGTTCTTTATATTATTGGTATCACC 65 34 TAACTTAATGGTCTGAGTGCTCATATTTGAATACA 66 31 624 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0043 ATGATCCGCAGCATGACCGC 68 60 TTACTCGATGTTCTGGATCTGTTCGCG 69 48 864 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0044 ATGCGTCCAGCAGACCGAGCA 70 62 TTATGATTCCAATGCCGCCTTCTGC 70 48 717 rph ribonuclease PH Macromolecule metabolism Degradation of macromolecules 3.B.1 RNA [13] none YPO0045 ATGAAAGCCTATCAGCGCGAGTTTATCG 70 46 CTAAAGGGTAACCCCATATTGCTCGCG 70 52 648 pyrE orotate phosphoribosyltransferase Purines; Pyrimidines; nucleosides; nucleotides 1.F.2 Pyrimidine ribonucleotide biosynthesis [8] Pyrimidine metabolism none EC:2.4.2.10 YPO0046 ATGGCAGAAAAAGAAAATACGAAAAGGAACAGG 70 36 TTATTGCAACTGGGCGACAATCAATG 69 42 597 ttk TetR-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0047 AAAAATCGACATTAAAATTCTGGACCCACGT 69 35 TTATTGGCGTCCAGAATGGCCAAA 70 46 459 dut dnaS sof deoxyuridine 5'-triphosphatenucleotidohydrolase Purines; Pyrimidines; nucleosides; nucleotides 1.F.3 2'-deoxyribonucleotide biosynthesis [8] Pyrimidine metabolism none EC:3.6.1.23 YPO0048 ATGCGTGACGTCTCGCAAATTTTACG 70 46 TTTTTCATCATAACGGCTGACAATCTCGTCTAT 69 36 255 dfp DNA/pantothenate metabolism flavoprotein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.13 Cobalamin [2] none YPO0049 ATGGATGAGTGGTATGGGCAGGTGG 70 56 CTAAAGCCATCCTCGTTCAGCAAATGAGA 70 45 669 radC putative DNA repair protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0050 ATGTCCCGAGTCTGCCAAGTTACTGG 69 54 TTAATACTTCTCACCGCGGGCACG 69 54 237 rpmB 50S ribosomal protein L28 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0051 ATGGCTAAAGGTGTTCGCGAGAAGATTAAG 69 43 TTTAGCTTCTTTATAGAGTACGTGTTGACGGACAA 68 37 168 rpmG 50S ribosomal protein L33 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0052 GTGCCTGAATTACCAGAAGTTGAAACCAGC 70 47 TCAATGCTGGCAGTGGCGG 69 63 810 mutM fpg formamidopyrimidine-DNA glycosylase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0053 ATGATCACCAAAGCCATCTATCCGGG 70 50 TTAGGCCAATTTGGCCAATAATGCTTTG 70 39 480 coaD kdtB phosphopantetheine adenylyltransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Pantothenate and CoA biosynthesis none EC:2.7.7.3 YPO0054 AAAAACGTCTGTCGGTGGTGATGATAACC 70 45 TCATGATTTCTCGCTTTTCTGATACTGGTGG 70 42 783 kdtX waaE lipopolysaccharide core biosynthesis glycosyltransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO0055 ATGCTGCTGCGTTTATACCAGGTATTACTCTACCT 69 43 CTCCGTTGTGGCAGATAAGGCTCCAACAAAT 74 48 255 kdtA waaA 3-deoxy-D-manno-octulosonic-acid transferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO0056 ATGCACGTATTAATCGTTAAAACCTCGTCAATG 69 36 CTATGAAATGAGTGTTTCTAATCGTGCCATAATAG 66 34 255 rfaC waaC rfa-2 lipopolysaccharide heptosyltransferase-1 Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO0057 ATGAAAATACTGGTCATCGGCCCTTCA 69 44 TTAATCGCCCCCTTTGACTGAGCATT 70 46 255 rfaF waaF ADP-heptose--LPS heptosyltransferase II Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO0058 ATGATTATCGTTACAGGCGGCGCA 70 50 TTAGACTGAGCGATTGAGCCAGGCC 70 56 255 rfaD htrM ADP-L-glycero-D-manno-heptose-6-epimerase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO0059 TACCTTGTAACAAGCACCCCTTTTATCAGCA 70 42 TTACGCAATAACGTTAAGTTGCTTACCAATACGC 70 38 255 kbl 2-amino-3-ketobutyrate coenzyme A ligase 1.H Fatty acid biosynthesis [33] "Glycine, serine and threonine metabolism" none EC:2.3.1.29 YPO0060 ATGAAAGCACTTTCTAAACTGAAAGCAGAAGAAGG 69 37 CTAATCCCAGCTTAATACCACTTTGCCTGATTTAC 69 40 255 tdh threonine 3-dehydrogenase Degradation 1.A.2 Amino acids [23] "Glycine, serine and threonine metabolism" none EC:1.1.1.103 YPO0061 GTGATCAAGCGGAAAATCTTTTTAGATGACTCAC 70 38 TTATTGTGCCGCCTTCTTGGGTG 69 52 501 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO0063 TTGGCGAAATCAATAACTACGAAAGATGCC 70 40 CTATCTTCCTAACCAGGGCTGTGGGTTAAC 68 50 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0064 AAAAACCACTGGTCCTGACGATTCTTGAT 69 41 TACCAGTCATCTCTTGTGGGATTTCCATTTCCATC 74 43 255 none 2;3-bisphosphoglycerate-independentphosphoglycerate mutase Energy Metabolism 1.B.1 Glycolysis [12] Glycolysis / Gluconeogenesis none EC:5.4.2.1 YPO0065 ATGTTGCAAGAAATTATGCAATTCATTAGCCAG 69 33 TTATTTACCGCGCGCCAGTGGTAAG 70 52 435 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0066 ATGGCGAAGATTGAGATGTATACCAAAGCAA 70 39 TTAAAGCAGTGGGTCTAGCCCACC 66 54 249 grxC glutaredoxin Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO0067 ATGTCAGAACAAAACAACACCGAG 63 42 TCAGGCATCCTGACGTTGTTC 64 52 476 secB protein-export protein Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO0068 ATGAACACCAACCCTGCTTCAATGG 69 48 TTTTTGGTCCGCCCCAACAACG 71 55 255 gpsA glycerol-3-phosphate dehydrogenase Degradation 1.A Degradation [18] Glycerolipid metabolism none EC:1.1.1.8 YPO0069 TTGGAGTTGCAGCAAGGCA 64 53 TCAAGCTGTAGCACTGTTACGATT 60 42 141 none hypothetical protein Other 5.I Unknown [1066] none YPO0070 ATGATGTCGTCAGAAGAGTTAGAACAGGTCTGG 70 45 TTAAATACCATCGCCATATTCAAAGCCCTG 70 40 825 cysE serine acetyltransferase Amino acid biosynthesis 1.D.3 Serine family [8] Cysteine metabolism. Sulfur metabolism none EC:2.3.1.30 YPO0071 ATGCTTAACATTGTTTTATTTGAACCC 62 30 TCACTCTTTCAGTAATGCACCTGG 63 46 488 none putative methyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO0072 ATGAATAACGTAAAAGACCCTCGCTGGG 69 46 TCAGTGGTCTTCCGCCTCTTTTTCC 69 52 255 none bifunctional regulatory protein/DNA repairprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0073 AACAGTTTAACGACGCGAATTTTTGCTATTTTCTG 71 34 TTAAGATTTAAGCGGATGCAGCGGTAGC 70 46 255 cpxA two component sensor kinase Broad regulatory functions 2 Broad regulatory functions [235] none YPO0074 ATGCATAAAATCCTATTAGTTGATGATGACCGTGA 70 34 TCATGTTTCTGATACCATCAAGTAGCCGC 69 45 699 cpxR two component system response regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0075 ATGCGTAAAGTTACAACATTAGTTATGGCGTCAA 69 35 TTACTTCTGGGCAGAAGAAGGTTGTGCTG 70 48 489 cpxP putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0076 GTGATTGCTCAGGAGGATGCT 62 52 TCAATGGTGAATCTGAGTCAATTCTT 62 35 959 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0077 ATGGATCCACAATATGCGCGTTGG 70 50 TTATAATTCCCAGTGCGCATGACGCT 69 46 903 none putative integral membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0078 ATGGTTAAGAAAATTGGTGTCCTAACAAGTGGTG 69 38 TTAGAACAGTTTCTTCGCTGTATCGTACCAATCTT 69 37 255 pfkA 6-phosphofructokinase Energy Metabolism 1.B.1 Glycolysis [12] Glycolysis / Gluconeogenesis. Pentose phosphate pathway. Fructose and mannose metabolism. Galactose metabolism none EC:2.7.1.11 YPO0079 ATGCGTAAATGGGGTGTAGGTCTGTCATTACT 69 44 TTAGCGTTTACTGATCTCATCAAACACCCC 69 43 255 sbp1 exported sulfate-binding protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0080 ATGAAATATTCTAACGTGATTGTATCGGGCCTG 70 39 TCAGATCGGCTCCATGCCATTCTT 69 50 777 none hypothetical protein Other 5.I Unknown [1066] none YPO0081 TTAGTAATGATACCGCTTGTCATCTGGTTTATTCC 69 37 TTACTTAACAAAACCCAGGAATTGCCACCAAACAT 72 37 255 none putative membrane transport protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0082 ATGAGCCTGGTTAATATGAAAGGGGTCGT 69 45 TTATGACTTTAACGCGTTGAGACTATTGACGTAAC 68 37 714 none possible transferase Other 5.I Unknown [1066] none YPO0083 AAAAACCGCCTTAGTCGTCAGCGC 70 54 TCATGACAGATCCTCCGTGACGC 69 57 738 none hypothetical protein Other 5.I Unknown [1066] none YPO0084 ATGCAAAAGAAGAATGATCGTAACTCGATAAAAA 68 29 CTATTTATCGTTACTCGATTGAATAACTTCGCGAA 69 34 255 none possible transcriptional regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO0085 ATGCGACATCCATTAGTTATGGGTAACTGGA 69 42 TTTTTAGCTTTAGCGGCTGCTTTCACGATA 70 40 768 tpiA tpi triosephosphate isomerase Energy Metabolism 1.B.1 Glycolysis [12] Glycolysis / Gluconeogenesis. Inositol metabolism. Fructose and mannose metabolism. Glycerolipid metabolism. Carbon fixation none EC:5.3.1.1 YPO0086 ATGAGAAAAGAAATCGTCTCAATGCGGATAA 69 35 TTATGCTTCAGATAGCGACAGCTTAATCGGTT 70 41 636 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0087 ATGTTGGGTAAATGGATCTGTTCATCAATGAC 69 37 TCACTTCGCCTTATCAGCGAAAAATTTCA 70 38 462 none conserved membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0088 ATGGCTGAATGGGTTAGTGGCAAAATTACTC 70 42 TCACCAATACTGCTCGCTGGTCATATG 68 48 747 fpr mvrA ferredoxin--NADP reductase Central intermediary metabolism 1.C Central intermediary metabolism [63] Porphyrin and chlorophyll metabolism none EC:1.18.1.2 YPO0089 ATGACGGCCATGGGCCAAG 68 63 TTACAGTAAGAACTCGTGCAATGCCGG 69 48 738 'glpX GlpX protein (pseudogene) Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO0090 AAAAATACATTGTCGCACTTGATCAGGGG 69 41 TCAGGGGCATGTAAGAATGTGCCTTG 70 50 255 glpK' glycerol kinase (pseudogene) Central intermediary metabolism 1.C Central intermediary metabolism [63] Glycerolipid metabolism none EC:2.7.1.30 YPO0091 ATGAGCCAAACCGCTAGTTCTACCTTAAAAGG 69 44 TTATGCTTTACGTTCTGTGGTTATCGTTGTGG 70 41 849 glpF glycerol uptake facilitator protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0092 ATGACCGCCCCTTTGATGC 65 58 CTACAGACAGAGATTTATAGGGTATTTCTTG 60 35 240 none hypothetical protein Other 5.I Unknown [1066] none YPO0093 ATGTCATTTGAAGTATTTGAGAAATTGGAAGTTAA 66 26 TCAGACTTCTTCCATCTTACCCAACAGTGC 69 47 240 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0098 GTGTTTCCAGCAAGGTCACAACGG 68 54 CTAGTAGCAGTAGACTGATGTCATCGACCATGC 69 48 528 none ABC-transport protein; ATP-binding component(pseudogene) Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0099 ATGAGCAGCAATCAGATATTCCGCCG 71 50 TCATTCATTTACAGGCCCCGTTACACTTTT 69 40 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0100 GTGAAAGAACTTACACAAACGGAAGTGATGGA 70 41 TTACTGCTGTGGTGCTGATAAACCAAAGAATT 69 37 240 none hypothetical protein Other 5.I Unknown [1066] none YPO0101 ATGAAAATTGCTTATCGAACAATACG 62 31 TTAGTGATATAAAATAAACTCATAATCACCAAA 60 21 150 none hypothetical protein Other 5.I Unknown [1066] none YPO0102 ATGCAAAGAGGCTGCTGTTTTCTCCGTA 71 46 TCATTGCACCTCATTGGTCGCTG 69 52 585 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0103 ATGAAATATGATACTTCCGATCTCTGTGACATCT 67 35 TTATTCAATATCCAGGGGATCTTCCGATAAGATAA 69 34 486 menG S-adenosylmethionine:2-demethylmenaquinonemethyltransferase Central intermediary metabolism 1.C Central intermediary metabolism [63] Ubiquinone biosynthesis none EC:2.1.-.- YPO0104 ATGAAGCGAAAAATGAGCCTATCAATCAACA 70 35 TTAACTGAATACCAGGCCCACAGCAAAC 69 46 255 menA 1;4-dihydroxy-2-naphthoateoctaprenyltransferase Central intermediary metabolism 1.C Central intermediary metabolism [63] Ubiquinone biosynthesis none EC:2.5.1.- YPO0105 ATGTCTGAAATGACCCCACGCGAAATAGTTAG 71 44 GCTCAAGTCTTCATCCGCAACCAGCTCAT 74 52 255 hslU ATP-binding heat shock protein Other 5.F Adaptions and atypical conditions [36] none YPO0106 GTGACAACAATTGTAAGTGTACGCCGTGA 69 45 TTAGTATGTTAATTCTTCAATGGTTTGGAAGCGGT 69 34 525 hslV heat shock protein Other 5.F Adaptions and atypical conditions [36] none YPO0107 ATGGCACTGGCTGTCGCGCTAT 70 59 TCAACCCCCAACAGAGAGGGGAA 70 57 747 ftsN msgA cell division protein Cell processes 4.C Cell division [24] none YPO0108 TTGGAAAATAAGAAAGAATTCACAATGACCACG 70 33 CTAGTGTTTAGGCGCAGCAGTACTTTCCCT 69 50 255 cytR transcriptional repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO0110 AAAGCGATTGGTATCGTCGTGGGTC 69 52 TTTAATCAGCCGTTGCAGCAGTTGC 69 48 255 priA primosomal protein n' Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0111 ATGAAACAAGGTATCCACCCTAAATACGAACAAGT 69 37 TTACTTCTTCGCACCCGGCACG 70 59 216 rpmE 50S ribosomal protein L31 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0112 ATGGACTTAAATATGAACCCAAATTATGCGAAACC 70 34 TTAATCTTCAGCTTTCAATTGATCTCTTACTTTTT 65 26 468 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0113 GTGATCTCTAACCATTTAAAAACTGGTT 60 32 TCATAACTCAAGAATAGTCTTAGCTATATCGA 61 31 162 none hypothetical protein Other 5.I Unknown [1066] none YPO0114 ATGGCTGAGTGGAACGGCGAGT 69 59 TCAATATTCCCAGGTGTCAGGGTCAACA 70 46 318 metJ transcriptional repressor protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0115 ATGTCCAGATGTATTGACGTCCGTAATTTGTG 70 41 CCCCCAAAGACTCTGCCAAGGTAAA 69 52 255 metB cystathionine gamma-synthase (pseudogene) Amino acid biosynthesis 1.D.2 Aspartate family [24] "Glycine, serine and threonine metabolism. Methionine metabolism. Cysteine metabolism. Selenoamino acid metabolism. Sulfur metabolism" none EC:4.2.99.9 YPO0116 GCAGTAGCCTTGCGGATGTGAAGTG 69 56 CGCTTCACGGGCTAAAATCACCAAC 70 52 255 metL metM bifunctional aspartokinase/homoserinedehydrogenase II Amino acid biosynthesis 1.D.2 Aspartate family [24] "Glycine, serine and threonine metabolism. Lysine biosynthesis" none EC:1.1.1.3 2.7.2.4 YPO0117 TTTTTCACGCAAACCAGCGAGAAGC 70 48 CTAAGGCCTCACCCCAAGGGTATGAC 69 58 885 metF 5;10-methylenetetrahydrofolate reductase Amino acid biosynthesis 1.D.2 Aspartate family [24] One carbon pool by folate. Methane metabolism none EC:1.7.99.5 YPO0119 ATGAAACACCCTTTTTCAACCC 61 41 CTATTCTGGTTTTTTCTGCTGCTC 61 42 516 none insertion element DNA-binding protein Other 5.A IS elements; Phage-related functions and prophage [210] none YPO0120 GTGAAGCAAACGCAGCGGCA 70 60 CTAACAAAGCTCCAATTGAACCTCATGCTG 69 43 759 glpR glycerol-3-phosphate repressor protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0121 ATGACTCGAGTGATAGTAATCTCTAACCTACGTCT 65 40 TTATTGTACGGTTCTCGCGCTGTTGC 70 50 837 glpG probable membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0122 ATGGAACAATTTGAAGCAACCAGTGTTGAG 70 40 CTAACGAGATTCACTGGTTATGTCTTGCGG 69 47 330 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0123 ATCCAGTGCCGCTAACTATCGGCTG 70 56 CCTGCAAGAAGTGGTTATCCGCCAT 69 52 255 malT maltose regulon positive regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0124 ATGTCACAGCCTATGCTTAAAAAGGACGATTTT 69 36 CTAAGCCCCCGTTGCCCAATG 69 62 351 malP maltodextrin phosphorylase (pseudogene) Degradation 1.A.1 Carbon compounds [66] Starch and sucrose metabolism none EC:2.4.1.1 YPO0126 CGTAAATCGCTCGATCAAGCAGCAA 70 48 TTTACGCCGCCAGTTAGGGTACTCG 69 56 255 malQ 4-alpha-glucanotransferase Macromolecule metabolism Degradation of macromolecules 3.B.4 Polysaccharides [13] Starch and sucrose metabolism none EC:2.4.1.25 YPO0127 ATGATCACAATAACAGACGCAGCACAATCTC 70 42 TTAGTAATAAGAGTGCTCGCCACGCTGATG 70 47 576 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0128 ATGCTAACAACCGTTAGCCAGTGTTGGCTAT 70 45 CTACAAGGTTCGGCAGACACTCCAGATTT 69 48 702 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0129 ATGAAGCAGCTTTATTGGTACACCTGCG 69 46 TTTTTGTTTTCTTCAGCAAAATTCAGGATTAATTT 67 23 777 bioH putative biotin biosynthesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.1 Biotin [8] none YPO0130 ATGAAACTATTGAAAAATATGGCTGTTGCTTTGGT 69 31 TTACTTATAAACCTCGGCGTCAGCATCAAACT 69 41 270 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0131 ATGGCCAGCCTACTGCAACTACGTGAT 70 52 TTATTGGTGTGCGTGAGGTTCTTTTAACTGATAGA 70 37 258 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0132 ACTTCAACACCGCCCAACATCAGGT 70 52 TGCCAACGAGTAGGCCACATTCAAC 70 52 255 feoB ferrous iron transport protein B Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0133 ATGCATCTTATCCCCCAACGATCCTACA 70 46 TTATTGGGGTTGCAGGTCCAAGGTG 70 52 228 feoA hypothetical ferrous iron transport protein A Other 5.I Unknown [1066] none YPO0134 TGAATTAGAAGATCGCCGCCAAACC 69 48 GGAGTGAGTTTCACCTGGCTGCTCA 69 56 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0135 ATGGCAAAAAGTAACTACATTACCCGCGAG 69 43 AATTATCAATATCTTCATTAAATGGCCTATCTTCA 65 26 516 greB transcription elongation factor Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO0136 ATGCAAGAGAATCACAAGATTCTGGTCGTT 69 40 TCATGCTTTATTGCCGTCCGGTACA 69 48 720 ompR ompB kmt transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0137 ATGAAGTGGTGGCGCTTTT 61 47 TCAAGCCACCGCTGGTGGC 70 68 1353 "envZ, ompB, perA, tpo" osmolarity sensor protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0138 GTTAAAGGAATTACCCCGCAGGAGCTCGC 73 55 ATCTTTGGCCCCGCGCTAACC 70 62 255 pckA pck phosphoenolpyruvate carboxykinase [ATP] Central intermediary metabolism 1.C.2 Gluconeogenesis [5] Citrate cycle (TCA cycle). Pyruvate metabolism. Carbon fixation none ATP YPO0139 ATGTCTAATCACGACCAATTACACCGCTATCTG 70 42 TTAATGAATTTGTTCAGAAGAGGCGCTGTTG 70 39 882 hslO heat-shock chaperonin Other 5.F Adaptions and atypical conditions [36] none YPO0140 ATGAAGGATAAAATCTCCCCAGCGGAA 69 44 TTACTCAGGCTCGCCTTGTTTAAATTTGATCA 70 37 408 hslR heat shock protein 15 Other 5.F Adaptions and atypical conditions [36] none YPO0141 CCCCCGATTTTAACTGGCAAGAAATTG 70 44 TTATTCACAACGTAACTGTAAAGCGGGCAA 69 40 681 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0142 GCAGCGTTGCCGTTTGTTAAACTGA 69 48 AACGTTGAATGTTATCCATCCGGCG 70 48 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0143 ATGTTAAAAACGAGTAAATTATATCTAACTGGC 62 27 TCATTGGCTTTGCAGGTAGG 61 50 195 none hypothetical protein Other 5.I Unknown [1066] none YPO0144 ATGAAACACCTGCAAAAACCTAAAATTCTGAAAA 69 29 TCACTGATTCAGAAAGGTATGTGCCAAAAA 68 37 546 none putative hydrolase Degradation 1.A Degradation [18] Starch and sucrose metabolism. Folate biosynthesis none EC:3.6.1.- YPO0145 GTGCTGGCTTATGATATGCGCCATG 70 52 TCAGTAATTCACGGATCGGGCGTTATC 70 48 270 mrcA ponA b3396 penicillin-binding protein Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Lysine degradation. Biotin metabolism none EC:2.4.2.- 3.4.-.- YPO0146 ATGTACTCACAATATTGGCAGGTAGGGCTAGA 68 44 TCAGTATCCCGCACCCGCAG 68 65 897 none hypothetical protein Other 5.I Unknown [1066] none YPO0147 ATGTATCAGGTGAATTTCTTGCCGTGGC 71 46 TTATTCATAGTCCCCTGCCACATGATGAC 69 45 606 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0148 ATGAATAAATCATTACAGCGTTGTATGGATAGGCC 70 37 CTATTTATCTTGAACATCAAAATCACCCAAGTCA 67 32 582 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0149 GTGTTGGCTATGGGTTTAGCC 61 52 TCATTGTTGAAACAGTGAGAACG 60 39 369 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0150 ATGACTATTTTTATACCCGCTGCAGGTAAGCAG 70 42 ATTAATTTTGGCGTAATGAAAATCACTAACTCCCG 70 34 255 none putative membrane transport protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0151 ATGGCAGAGAAACGCAATATCTTTCTGGTT 69 40 TCAGTTACTTTCCAGCATGTTGATAATCTGGTTAG 68 37 522 aroK shikimate kinase I Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:2.7.1.71 YPO0152 ATGGAGAAGATTACTGTCACGTTAGGGGAACGTA 71 44 CTATGGTCGACAATCCGCTATCGATGC 70 52 255 aroB 3-dehydroquinate synthase Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:4.6.1.3 YPO0153 ATGGATGATTTAAAGCTGGATGACGATCTGA 70 39 TTTTTAAGGTCTTGCTGTACTTGTTGTACAGGCTT 69 37 255 none conserved hypothetical membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0154 TTTTTAAAATGGGCTGGTGGGAAATATCC 69 38 TCAGCTATAGAGCGCCAAAAGTTCGTTTACC 70 45 816 dam DNA adenine methylase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0155 ATGAAAAAGTATTTAATTGCCCCCTCTATTCTGTC 68 34 TTAACCATTAGCCGCCATCGCCA 70 52 678 rpe ribulose-phosphate 3-epimerase Macromolecule metabolism Degradation of macromolecules 3.B.4 Polysaccharides [13] Pentose phosphate pathway. Pentose and glucuronate interconversions. Carbon fixation none EC:5.1.3.1 YPO0156 ATGCCATGCGCAATGAACTGGC 71 55 TTATACTTCCTGATCTTTTAAAGATGGTAGCCCAA 68 34 732 gph phosphoglycolate phosphatase Degradation 1.A.1 Carbon compounds [66] Glyoxylate and dicarboxylate metabolism none EC:3.1.3.18 YPO0157 ATGAGTGAACCCATGGTATTAAGCAAACCC 69 43 TTACGGCTGCGCGACAAAACC 69 57 255 trpS tryptophanyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Tryptophan metabolism. Aminoacyl-tRNA biosynthesis none EC:6.1.1.2 YPO0158 ATGGACTACTTCCCGATCTTCTGCCAAC 69 50 CAACATGAGCCACACATTCAGTCACTTTGGG 74 48 255 cysG siroheme synthase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] Porphyrin and chlorophyll metabolism none EC:2.1.1.107 1.-.-.- 4.99.1.- YPO0159 ATGTACACTGACACCATCAATAAATGCGCG 71 43 TTATGATTTTGCGCTGTGTGGGGC 70 50 807 nirC putative nitrite transporter Cell processes Transport/binding proteins 4.A.5 Anions [14] none YPO0160 ATGAGCCAGTGGATCCCACTAT 62 50 TTACGCGTTGACTTGCACCAT 64 48 326 nirD nitrite reductase [NAD Energy Metabolism Respiration 1.B.7.b Anaerobic [24] Nitrogen metabolism nirD NAD YPO0161 TTGCTTACGATCGCGTGCATCTTTC 70 48 TTGCCGCAGACATACAGATTCCAGC 70 52 255 nirB nitrite reductase Energy Metabolism Respiration 1.B.7.b Anaerobic [24] Nitrogen metabolism none EC:1.6.6.4 YPO0162 ATGGCAGGGCAATCTGTACCGAATTATT 69 43 TTAACGCCGAAAATCCACGATCTCTTC 69 44 255 codA cytosine deaminase Purines; Pyrimidines; nucleosides; nucleotides 1.F.2 Pyrimidine ribonucleotide biosynthesis [8] Pyrimidine metabolism none EC:3.5.4.1 YPO0163 AACAGCAATCGCATTCGGCTCACTTGG 74 52 TCAGTGGGTCACGTGGCCGT 69 65 255 none conserved integral membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0164 CTTCGGCTATTTCTGCCTTTGCTTCA 69 46 GGTTTAGCTTTGCCCAGAGAGTGCG 69 56 255 none putative membrane receptor protein Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO0165 ATGGTTACACTGGAAGACGTCGCGGTAT 70 50 TTAACACGCTGTTTTCGGCGGC 70 55 255 none LacI-family transcriptional regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO0166 ATGAGCACGTTTAAAATAACCATTATTGGCGG 70 37 TCACAAACCGGAGAACTGAGGCAG 68 54 255 none putative glycosyl hydrolase Degradation 1.A.1 Carbon compounds [66] Glycolysis / Gluconeogenesis none EC:3.2.1.86 YPO0167 ATGTTTAAACGTACTTTAGTGACCTTCATTGCCCT 69 37 TTAAGGTAAAACTTTTGCTGACAGGATAGTGATCG 69 37 570 ppiA rotA rot peptidyl-prolyl cis-trans isomerase A Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO0168 GTTACCGAGAAAACTCAGCCAGCTTCACGTG 73 52 TTAGCGTTTGCGCCCCC 65 65 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0169 ATGCTACTGCTGATCGACAACTACGATTCATTTA 70 38 TAATTTTTAAGAAAATTATCCAGTAATTGATGGCC 66 26 576 pabA para-aminobenzoate synthase glutamineamidotransferase component II Biosynthesis of cofactors; prosthetic groups and carriers 1.G.2 Folic acid [9] Pyruvate metabolism. Folate biosynthesis none EC:4.1.3.- YPO0170 ATGGATGATCACACCTGTGCCGTG 70 54 TTAACCTTTGATCACACTCGCCATTGCT 69 43 675 argD acetylornithine aminotransferase (pseudogene) Amino acid biosynthesis 1.D.1 Glutamate family [19] Urea cycle and metabolism of amino groups none EC:2.6.1.11 YPO0174 GTTTTCCCTGATACCTGCCTGCTGC 69 56 TATTATCCCGTAACTTCCGGCTGCG 69 52 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0175 ATGGTTCTCGGTAAGCCACAAACAGACC 70 50 TTAACGGGTGCCGTAAACGACGATC 70 52 633 crp cap csm cAMP-regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0176 ATGCAAGCACGTGTCAAGTGGGTT 68 50 TTACGCGACTTCGCGTACCTCAAAG 69 52 408 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0177 ATGAAATATTTAATACTTGGGGGGTATAC 60 31 CTAACGGCATAATTTCAGGTCG 61 45 432 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0178 ATGTCAACTAAACATCCGGTTATCGCCG 70 46 TTAAGCGATCTGCTTCCCTTCCAGC 69 52 870 prk phosphoribulokinase 1 Central intermediary metabolism 1.C Central intermediary metabolism [63] Carbon fixation none EC:2.7.1.19 YPO0179 ATGATCATTCCCTGGCAACAAGTGGA 70 46 TTATTGCTGCTCTTCAGCACCGGC 70 54 237 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0180 ATGCATGAGACATTTCGCCCGC 70 55 TCATGACTGCTGCTCCAAATAGGGG 69 52 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0181 ATGGAATTGAGTTTATTTCTGTCAATGGTTGGTTT 70 31 TTAATGCCAGATCAGTAAAACACACGCG 69 43 603 none putative ABC-transport protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0182 ATGGCGATAACTTTTTCTTCGGCAACC 70 44 CTAGGATTGCGGTGTCGCCTGG 70 64 255 tauA ssiA putative taurine-binding periplasmic proteinprecursor Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0183 ATGTTGAACGTGAGTGGCCTGTGG 69 54 TCATATCAACACCTCCCGCTGTTGG 69 52 768 tauB ssiB putative taurine transport ATP-binding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0184 ATGAGCCTGCACAGTACGTTACGTAATCAGG 70 48 TCATTGTTGTTCTCCATACCAAGGCGTTAA 70 40 855 tauC ssiC putative taurine transport system permeaseprotein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0185 ATGAATGAACGTCTGATTGTGACGCCTT 70 43 TCAGGGCCGGAACACCGG 70 72 849 tauD ssiD putative taurine dioxygenase Degradation 1.A Degradation [18] none YPO0186 ATGCAGCGCATCTTGGTGATCC 68 55 TTAATCTGTGGTCAACAGTGAACGGGC 69 48 255 none putative sugar transferase Other 5.I Unknown [1066] none YPO0187 ATGAACAGCGTTGATATCAGCGTCATTGT 69 41 TTATTCAGCGCGCTTTTGCCG 69 52 255 none putative glycosyl transferase Other 5.I Unknown [1066] none YPO0188 ATTTGGATGCCGTCATCTGGCTGGAAAA 74 46 TTATATATCGGCATCGCTAAACTCTTTAGTCAGT 66 35 255 none binding protein dependent ABC-transport protein(pseudogene) Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0190 ATGTTGCAGCCGCCGAAGGTT 70 57 TCAGAGTCCTCTCGTGAGCGGTGA 70 58 549 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0191 GTTGCGGTCCCTATCGCCCAACG 73 65 CATTTCTCGTTGAAAAATATCTTCCAACTCACGGC 73 40 255 kefB trkB probable potassium-efflux system protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0192 TGACTATCACTCTTAATAAGACAGTGACACGTAAA 65 34 CTACTCTGGAGGAAAAATACCGATCACTTGCTC 70 45 222 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0193 ATGAAAGTAACAAAAGACTTGGTAGTCAGCCTGG 69 41 TTAGTGACAGCCACAACCGCCACTT 69 52 588 slyD peptidyl-prolyl cis-trans isomerase Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO0194 ATGGAACAATCCCTGCTTGAACAACG 69 46 TCAATAGTGCGGAGGCGGTGTTTC 70 54 219 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0195 ATGGAGAAATGGATGAAATCACTGTTTAAAGTAAC 67 31 TTACTTCTTAGCTTTTGTATCAACCGCAGGCT 69 41 813 fkpA peptidyl-prolyl cis-trans isomerase Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO0196 ATGTCTAATTCGCTTCTCTGTAGCGAAACCAG 70 44 TTAACGTTCGTGCCCGACGAGATC 70 54 723 none putative DNA-binding protein Other 5.I Unknown [1066] none YPO0197 ATGTCCGCGTTAAAATATTGCCTATTGGTC 69 40 TTAAAATTGCACCATGCGATCACAAGTC 69 39 396 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0198 ATGGCAAGAAAACGCATCGCTTTTATTTT 69 34 TTAAAAAGTCAGCACAACATCATAAGTGCCCA 70 37 366 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0199 ATGCTGTATACCGTCAGTCATTCACCTTATCACT 69 41 TTACCATGCCAGTTGCTGCTGATGTC 70 50 288 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0200 ATGGCAACGATTAACCAGCTGGTTCG 71 50 TTAAGCCTTTGGCTTCTTCACGCCGTA 71 48 375 rpsl strA 30S ribosomal protein S12 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0201 ATGCCACGTCGTCGTGTAATTGGC 70 54 TTACCAGCGGTAGTGGGCGAACG 70 61 471 rpsG 30S ribosomal protein S7 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0202 CAAAATCGGTGAAGTTCATGACGGC 69 48 TTATTTGCCACGGGCTTCGATAACG 70 48 255 fusA fus far elongation factor G Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO0203 GTGTCTAAAGAAAAATTTGAACGTACCAAACCCC 70 38 TTAAGCGATTACTTTAGCAACAACACCAGCG 70 42 255 tufA tufB elongation factor Tu Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO0205 ATGAGTCTTTTTATGTACGTTTGTCTATGTAATGC 65 31 TTAGGCAACATCATTCATTTCTGGAATATTAGCG 70 35 207 bfd putative bacterioferritin-associated ferredoxin Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO0206 ATGAAAGGTGATAAAAAGATAATTGCACATCTGAA 68 29 CTAGTCTTTTGCTAGCTGGGCCTGTGAGTAG 69 52 474 bfr bacterioferritin Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO0209 ATGCAGAACCAAAGAATCCGTATCCGC 71 48 TTAACCCAGGCTGATCTGCACGTCTAC 69 52 312 rpsJ nusE 30S ribosomal protein S10 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0210 AAAAAGTGGGCATGACTCGTATCTTCACTG 69 43 TTACGCCTTGACAGCCGGTTTTACG 70 52 630 rplC 50S ribosomal protein L3 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0211 ATGGAATTGGTAATGAAAGACGCGCC 70 46 TCATGCCAGCATCTCCTCAACTTGC 70 52 606 rplD eryA 50S ribosomal protein L4 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0212 ATGATTCGTGAAGAACGTCTGCTGAAAGTACT 69 41 TTACTCTGCGCCGCCGATGAA 70 57 303 rplW 50S ribosomal protein L23 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0213 ATGGCAATTGTTAAATGTAAACCTACGTCTCCG 70 39 TTTTTACTACGGCGACGTACGATGAACTTATCA 70 39 825 rplB 50S ribosomal protein l2 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0214 ATGCCACGTTCTCTCAAGAAAGGTCCC 70 52 TTAGCGCTTTTTGGCCTTTTTATCGG 69 42 279 rpsS 30S ribosomal protein S19 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0215 ATGGAAACTATCGCTAAACATCGCCACG 70 46 TCAGCGATCGGACACAACCACAGTA 69 52 333 rplV eryB 50S ribosomal protein L22 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0216 ATGGGTCAGAAAGTACATCCTAATGGTATTCGACT 69 40 TTACTTGCGGCCTTTACGCTGCTG 70 54 699 rpsC 30S ribosomal protein S3 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0217 ATGTTACAACCAAAGCGTACAAAATTCCGTAAGA 70 35 TTACATCACCGTCTTAGTTACAAAGGTGGTTCC 69 42 411 rplP 50S ribosomal protein L16 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0218 ATGAAAGCACAAGAGCTGCGTGAAAAA 69 41 TTACGCACCCGCCTTCTCAGTCA 70 57 192 rpmC 50S ribosomal protein L29 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0219 ATGACTGACCAAATCCGTACTCTGCAAGG 70 48 TTACAGAATCGCTTTCTCTACAACGCGAAC 69 43 255 rpsQ neaA 30S ribosomal protein S17 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0220 ATGATCCAAGAACAGACTATGCTGAACGTG 68 43 TTAGAGTACTTCTGGTGCCAGAGAGATAATTTTCA 68 37 372 rplN 50S ribosomal protein L14 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0221 ATGGCAGCGAAAATCCGTCGTG 70 55 TTACTTGATAGTTTCGCTAGTCGATTTGAAGAAAC 67 34 315 rplX 50S ribosomal protein L24 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0222 ATGGCGAAACTGCATGATTACTACAAAGACG 70 42 TTACTTGCGGAATGGGAATTTAAAAGCAGC 70 40 540 rplE 50S ribosomal protein L5 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0222a ATGGCTAAGCAATCAATGAAAGCACGC 70 44 TTACCAGCTAGCCTTCTTAAGGCCCGG 71 56 306 rpsN 30S ribosomal protein S14 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0223 ATGAGCATGCAAGATCCGATCGC 69 52 TTAAGCTACGTAGCAGATAATCTCGCCACCA 70 45 393 rpsH 30S ribosomal protein S8 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0224 ATGTCTCGTGTTGCAAAAGCACCC 68 50 TTACTTCTTCTTAGCCTCTTTGGTACGCACGA 70 44 534 rplF 50S ribosomal protein L6 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0225 ATGGATAAGAAAGCAGCTCGTATCCGTCG 71 48 TTAGAACTGAAGGCCAGCTTCACGGG 70 54 354 rplR 50S ribosomal protein L18 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0226 ATGTCTCACATCGAAAAACAAGCTGGC 69 44 TTATTTCCCTAGAATTTCTTCGACGGACTTACCA 70 38 504 rpsE 30S ribosomal protein S5 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0227 ATGGCAAAGACTATTAAAGTAACTCAAACAAAAAG 65 29 TTACTCCTCAACTTTAACCATGTAGGAAACCAAGT 68 37 180 rpmD 50S ribosomal protein L30 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0228 ATGCGTTTAAATACTCTGTCTCCGGCTGA 69 45 TTATTCCTCAATTTTACCGCCAGCAGCTT 70 41 435 rplO 50S ribosomal protein L15 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0229 ACCAGGATTAGATTTTCAAAGTGCTAAAGGCGGAT 72 40 TTAGCGGTTATAGCCTTTCAGGTTTGCTTTCT 69 41 255 secY prlA preprotein translocase SecY subunit Cell processes Transport/binding proteins 4.A.6 Other [104] Protein export none EC:3.6.1.48 YPO0230 ATGAAAGTTCGTGCTTCCGTC 62 48 TCAGCCTTGACGCTGTTTATG 61 48 117 rpmJ 50S ribosomal protein L36 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0231 GTGGCCCGTATAGCAGGCATTAACATTC 70 50 TTATTTCTTGATCGGTTTACGCGGACC 69 44 357 rpsM 30S ribosomal protein S13 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0232 ATGGCAAAGGCACCTATTCGTGCA 70 50 TTATACGCGGCGCTTTTTCGGC 70 55 390 rpsK 30S ribosomal protein S11 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0233 ATGGCAAGATATTTGGGTCCTAAGCTCAAG 69 43 TTACTTGGAGTAAAGCTCGACGATCAGGTGT 69 45 621 rpsD ramA 30S ribosomal protein S4 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0234 ATGCAGGGTTCTGTGACAGAGTTTCTAAAACC 70 44 TTACTCGTCAGCAATGCTAGCTGGTGG 70 52 990 rpoA DNA-directed RNA polymerase alpha chain Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] RNA polymerase none EC:2.7.7.6 YPO0235 ATGCGCCATCGTAAGAGTGGTCGT 69 54 TTACTCTGCAGCAACTACTTCTGCTTGCG 70 48 390 rplQ 50S ribosomal protein L17 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0236 ATGTTAAAAATCGGGCAGTTAGCTAAACTTGCTG 70 38 TCATACCTTAATTAACTCTTCTGTTGCCCCCTG 70 42 426 none MerR-family transcriptional regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO0237 ATGACAACATATCGCCATACCAAGGGAAA 70 41 AAAAATCTATTGATTGCTTACCACTGGCCTCC 70 41 201 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0238 ATGAGCTTTATGAAAGAATTTCGTGAATTTGCC 70 33 CTATTTTGTGTGCTGCGCTTTTAATAAATCGC 70 37 414 mscL mechanosensitive ion channel Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0239 ATGAAAATAATTATTCTTGGGGCAGGGCA 69 38 TTATAGGAAGAATGGGCTTGGTTGGAACAA 70 40 255 trkA trk system potassium uptake protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0240 ATGAAAAATACATATAATCTCCGCAGTATCGCTGC 70 37 TTTTTGATTATCTTTGCGTAGAAGAAACCATCACC 70 34 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0241 GTGTCTGATTCTTTGCGGATTATTTTTGCC 70 40 TACACTAGTTGACTACCTGGTATAAACCATTCTCG 66 40 255 fmt methionyl-tRNA formyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Methionine metabolism. One carbon pool by folate. Aminoacyl-tRNA biosynthesis none EC:2.1.2.9 YPO0242 ATGTCAGTATTACAAGTATTACATTACCCAGACGA 65 34 TTAGTTGGCGCGGGCATTGAG 69 57 513 def fms polypeptide deformylase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] Glyoxylate and dicarboxylate metabolism. Methionine metabolism none EC:3.5.1.31 YPO0243 ATGTTAGCAGCAGAACTATGGCTACGGATGA 70 45 TCAAATAAGTAAATTAGAACGTCGAACATGGCCT 69 35 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0244 TCGACGTTCTAATTTACTTATTTGAAACTTACATG 65 29 CTAGTGCAAATAACCGTCATTGACTTCAAAGAGC 70 41 474 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0245 ATGGCTTATATAGAAGGCGTTATGACGAAGAAAGT 68 37 CTATGACTCACTGGCTACAGCCTTCCCA 70 54 561 none putative DNA-binding protein Other 5.I Unknown [1066] none YPO0245a ATGAATCAACAAGAAAATAATTTTGTGCTGGCG 71 33 CTACCCTTGGCGAAACCGCTTACC 69 58 573 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0246 ATGGATCAGAAGTTTGCAGTATTTGGTAATCCT 68 36 CTATTTACCTAACTCACTGCGTAGCTGGGCTAA 68 45 822 aroE shikimate 5-dehydrogenase Central intermediary metabolism 1.C Central intermediary metabolism [63] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:1.1.1.25 YPO0247 ATGATCGATAGATCGAGTGTGATCATTGGC 70 43 TTATTTAGACTCTGCCAGATAGTCATCTTTCCAGC 69 40 486 none putative transferase (pseudogene) Other 5.I Unknown [1066] none YPO0250 GTGGATCACTATTGCACCGTTC 62 50 TCATTTTAGCCAACGGTCTAGC 61 45 none putative hydrolase (pseudogene) Other 5.I Unknown [1066] none YPO0251 TATTCGTTTTGCCTGCGCTGGCACAG 74 54 CAAACTGTGATTTGAATAGTAACCGTTCCTGTTTG 70 37 255 none putative transmembrane transport protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0252 ATGAATGACAGCATTTATCAAGAGATTGAAGATAA 67 29 TCATTGCTTCACCTCACGAATAATTTCTGC 70 40 312 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0253 CAATTGCAGAGCATGCTCTAATTACCCCAGAAAAA 73 40 GAGGTATCGCCCAAGTTGCTGGTATCTCCTGT 74 53 255 acs acetyl-coenzyme A synthetase Degradation 1.A.1 Carbon compounds [66] Glycolysis / Gluconeogenesis. Pyruvate metabolism. Propanoate metabolism. Reductive carboxylate cycle (CO2 fixation) none EC:6.2.1.1 YPO0254 AAAGTATAAAAATAAGTCTGGCATGGCAAATACTC 66 31 TTAGCTTTGATTAGCTGGCGTCTGCTCTACC 70 48 255 gltP proton glutamate symport protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0255 ATGAATACTAAATTATTGATTGTCGACGATCATG 66 29 TTAGACATTCAAGCCTAATCGGTATGACCAGTG 70 42 633 none putative two-component response regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO0256 ATGCCGTTAAATTCACACCACAGGGC 71 50 TTATTTAACCATAAGGGACTGGCCCTGGC 71 48 255 none two-component sensor/regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO0257 TTGATAGTCGGTTTACGCCAAAAACCGTA 69 41 TCAGGAAGAGTCTGACCACGCTGTGAGATTGTTTA 74 46 255 none possible type III secretion protein Cell processes Transport/binding proteins 4.A.6 Other [104] Type III secretion system none EC:6.2.1.1 YPO0258 CACCGTATTCAAGCTTCGCCTGTTAAATGGTG 74 47 TTAGAAATCCATGGGGATATGTACTAAATTATTTG 65 29 255 none putative type-III secretion protein Cell processes Transport/binding proteins 4.A.6 Other [104] Type III secretion system none EC:6.2.1.1 YPO0259 ATGCAGCATATTACTGTGCTGG 60 45 TCATTCTTTATTCCCATAGCGC 60 41 222 none putative type III secretion apparatus Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0260 GTGATTGCCGATGAGCAGGCC 69 62 CTATTCAATAAGTGAACGCATATGCGATGGG 70 42 621 none putative AraC-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0260a ATGCAGATAAGTAGCCCAATGG 60 45 TCATATGCGGGACAGGATTC 61 50 216 none putative type III secretion apparatus Cell processes Transport/binding proteins 4.A.6 Other [104] Type III secretion system none EC:6.2.1.1 YPO0261 ATGAGCTTACTTTCAGCGGATTGCCG 70 50 TTATTGCAGTAAACCCAGCAGAATCTGTGC 70 43 249 none putative type III secretion apparatus Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0262 ATGAATATGAGTAGTGCTCAGGCC 61 46 TCATTGCATGTTGACCAATTTATT 60 29 252 none putative type III secretion apparatus Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0263 ATGAAATCTCTGCGGCAGATGTTAGCG 70 48 TTACCGACGTCGATAGTAAAACCAGCCTACA 70 45 732 none type III secretion system apparatus lipoprotein Cell processes Transport/binding proteins 4.A.6 Other [104] Type III secretion system none EC:6.2.1.1 YPO0264 ATGATGGCATTTTCACCGTCCATCG 71 48 TCACAATAAACGCTCCAACCGGCTTA 69 46 597 none conserved hypothetical protein Cell processes 4.I Pathogenicity [38] none YPO0265 GTGAACCCCTTTCACCTCGAGATTGAA 69 48 TAAACATTCTCTTCGTCGAAAAGATCTGGC 68 40 648 none putative type III secretion system apparatusprotein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0266 CCGCGGTTGCGGCTC 66 80 TCAGGCAGTTTCATCAAGTTCATCGC 69 46 255 none secretion system apparatus protein Cell processes Transport/binding proteins 4.A.6 Other [104] Type III secretion system none EC:6.2.1.1 YPO0267 ATGAACTTGATGAAACTGCCTGAT 61 38 TTCCAGAGTGGTATCAAGATGAGC 62 46 1347 none putative type III secretion system ATP synthase Cell processes Transport/binding proteins 4.A.6 Other [104] Type III secretion system none EC:3.6.3.14 YPO0268 TTGAATCACTCGCAACAGCGGAC 68 52 TCAATATCGATTCGACTCATCTTCTGTCAGC 69 42 402 none type III secretion system apparatus protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0268a ATGAGTCGAATCGATATTGAAGGCGC 68 46 TCAGGCGTCAGATTCGTCAGCAC 69 56 399 none hypothetical protein Other 5.I Unknown [1066] none YPO0269 TTGGGCCGTCACCCCATTGT 69 60 TCATTCCATGATATTTTCGCCGTTTTGTAA 69 33 714 none type III secretion system apparatus protein Cell processes Transport/binding proteins 4.A.6 Other [104] Type III secretion system none EC:3.6.3.14 YPO0270 ATGCGAAACAGCTTACTTTTTATCTTATC 62 31 TCATAAATAGGAACCTACAAGCTGTCC 62 41 none putative type III secretion apparatus protein Cell processes Transport/binding proteins 4.A.6 Other [104] Type III secretion system none EC:3.6.3.14 YPO0271 ATGAACAACCATATGAGTAGCTACCACGAGAATG 69 41 TCAGGGCCGCATACTGGTTATCTGC 70 56 294 none putative type III secretion apparatus protein Cell processes Transport/binding proteins 4.A.6 Other [104] Type III secretion system none EC:3.6.3.14 YPO0272 ATGACTGACGTCCTCCCCGGTCTAA 69 56 CCCCCTTTAATCAACGGGATCAACG 70 52 795 none putative type III secretion apparatus protein Cell processes Transport/binding proteins 4.A.6 Other [104] Type III secretion system none EC:3.6.3.14 YPO0273 ATGTCCACTGAAAAGAATGAAAAACCCACG 70 40 CTAGCGCGGTGGATCATCACTTGA 69 54 255 none putative type III secretion apparatus protein Cell processes Transport/binding proteins 4.A.6 Other [104] Type III secretion system none EC:3.6.3.14 YPO0274 ATGAGCTGGCCCGAGTTTAAATCTCAATATCT 70 41 TCATAAGGATTCCTTAATCAGGGCCGAG 69 46 255 none putative integral membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0275 ATGAGCCATTCTCCATCCGTAGAAACAC 68 46 TCAGCGCTGAATCAAATAGCGAATAGTTG 69 41 270 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0276 ATGTCAATAGATGAAGACACTTTTGCATTTAGCG 69 35 TCAGGATAATGAGATTTGATAATCTGCTCTCCA 68 36 255 none putative LysR-family transcriptional regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO0277 ATGTCTGAAATCTCGTCTTCAAAATCTGAATTAAA 67 29 TTACTCAAAGAATTTAAAGAATGGGGAAAGACAAA 68 29 255 none putative transmembrane transport protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0278 GTTTTGGTATTAGTACTCAAATAACACAACTGGGT 65 34 TTAACTATTTGATGCTAACCGAATAAAACCTTGCG 70 34 255 metC cystathionine beta-lyase Amino acid biosynthesis 1.D.2 Aspartate family [24] Methionine metabolism. Cysteine metabolism. Selenoamino acid metabolism. Nitrogen metabolism. Sulfur metabolism none EC:4.4.1.8 YPO0279 ATGGCAGTAACACCCGTCGCATTATTAGA 70 45 GCCGCAGATAAATCTGTGGCAGG 68 57 792 hmuV hemin transport system ATP-binding protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0280 ATGAATGGTCGTGTTCAGCCACGA 69 50 TCAACCACTGCGTTGCTCCCG 70 62 255 hmuU hemin transport system permease protein HmuU Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0281 ATGAGACTCCGGTTGCTGTCGCTC 70 58 TTTTTCACGTAGCTGTGCAAGCACTTGT 69 43 840 hmuT hemin-binding periplasmic protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0282 ATGAACGCATCATTATACCAACAATATGTACAGGC 70 37 TCATGCGGCGATATCCTTGTTGATTAG 69 44 255 hmuS hemin transport protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0283 ATGCTTCGTTCCACTTCCGACCGT 70 54 TTACGGCCATCTTGTGGGATGCCTT 71 52 255 hmuR hemin receptor precursor Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0284 ATGAGGCCATGGTTGATATTTGGTGC 69 46 TTAATTCATTTTTACCTTACGGGCTAATCCTGGC 70 38 651 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0285 ATGAATACGTCATCGTCTATAAATACATCGTCCTC 67 37 TTATTTAACCAGGGTCGGGTCTTCAATCAG 69 43 546 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0286 ATGAATATTGATCTGATGCCGTATTATGCCC 69 39 TCATGAGTGGCTTTCCGCTGTGA 69 52 255 none putative coproporphyrinogen III oxidase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] none YPO0287 GAAAAATATATAAACGTAGGCATTTGTGAGTTCTT 65 29 TTGGAAAATTTTCTTCATAACATCAACTTTATTCA 66 23 564 none putative methylenetetrahydrofolate reductase Amino acid biosynthesis 1.D.2 Aspartate family [24] One carbon pool by folate. Methane metabolism none EC:1.7.99.5 YPO0288 ATGCTTCTCAGCACCAAGCAATTTCG 70 46 TTTTTCCCTTTTGGAGGCTGACTGACA 70 44 489 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0289 ATGAAATCAACACCTTCTGCGTACGCTTT 69 41 TTATCCACTCTGATGTTTTCTTGGCGCAT 70 41 255 none putative ATP/GTP-binding protein Other 5.I Unknown [1066] none YPO0290 ATGCATGACATTACGCCTTTTTCTGGC 70 44 TCAGATGACCTTTTTAATTATGGTGATAGCACGG 70 38 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0291 TTTTTGTGTGATCTGGACGATACGCTGTT 69 41 TCATGCATCGTTATCTCCATTAACATTATTTTT 66 27 813 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0292 ATGATGACAACCCAACCGCCG 69 57 TTATTCATAAGCAATAACCTCCACACAAGGTGC 70 39 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0293 CTTGACACCAAAATGGCGTTTATCCG 69 46 TTAGAAATGAGTAAGATTTTGCAATTCAGCGGG 70 36 888 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0294 ATGATATCGTTAAGCAAAAACCAAACTATCTCACT 66 31 TCAGCGCACCACCGTCTCAATG 70 59 594 terZ tellurium resistance protein Other 5.D Drug/analogue sensitivity [28] none YPO0295 ATGAATCTGATGCCTGGGGGCA 70 55 TTATTTGCTGCCCGCTTTCCAGC 70 52 255 terA putative tellurite resistance protein Other 5.D Drug/analogue sensitivity [28] none YPO0296 TGAGCTTTTTCAATAAAGTGAAAAATGCCATCAG 70 32 TTACAGTTGAAAATCAGCAGGGACAAAACCTAA 69 36 456 terB tellurite resistance protein Other 5.D Drug/analogue sensitivity [28] none YPO0297 ATGGAATCCACCCATATTGGCTTTCC 69 46 TTAGTGCTGTCCTTCCTTTGAATCCTTTTCAG 70 41 255 terC tellurium resistance protein Other 5.D Drug/analogue sensitivity [28] none YPO0298 ATGGGTGTATCTCTTTCGAAAGGCGGT 70 48 TTAAGATGCGTTGATGCCATACTGAGCA 69 43 579 terD tellurium resistance protein Other 5.D Drug/analogue sensitivity [28] none YPO0299 ATGGCAGTTTCTCTGGTAAAAGGTGGTAACGTAT 70 41 TTATACCGACACACCATGCTGGCTTG 69 50 576 terE tellurium resistance protein Other 5.D Drug/analogue sensitivity [28] none YPO0301 ATGAAAAAGCCATTGACTCAAATTGCAATACTG 70 33 CTATATCCCAAATGCAAAGTTCATGGTTAGGG 69 41 639 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0302 GAAATAACATTGCCGCAAGAGGCGT 69 48 TTACTGACAGACCGCATCGGCAACT 69 52 255 none putative outer membrane fimbrial usher protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO0303 ATGCAAAATTTCCCCACTCACCATCG 71 46 TTAACGCGTTACCGGCAATGTGACTT 69 46 744 none putative fimbrial chaperone Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO0304 TTGATGTGGGGCGATCATC 63 53 TTATTTAGCCCAGACAGCGG 60 50 258 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0306 ATGATGCATACAGAAAACAATTCCCCCTC 69 41 TTTTTCTCGTTACTTTTTACCTGTTTTCGCCAG 70 36 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0307 ATGCGCCGCTATACCCGTA 64 58 TTACCTGTCGAATCTATTGTCAAAATATC 61 31 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0308 GGGTTTTAATTTACGTTGGCCACCCA 69 46 CGGTATACCCCGCCCATAGCGTAAT 69 56 255 none putative oxidoreductase Degradation 1.A.1 Carbon compounds [66] none YPO0309 GCAATGCTCCAGACCCATTCCTCTC 70 56 AACCTTTACCGGCTTCTATCGCCGA 70 52 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] YPO0765 YPO0310 ATGTTTATCGGCGATGCATCAATTTTAAAACCTAT 70 31 TCACTTGGGTATAGAGTCACAATGGGTATAAAGCG 71 43 525 ubiC putative chorismate--pyruvate lyase Amino acid biosynthesis 1.D.1 Glutamate family [19] Ubiquinone biosynthesis none EC:4.1.3.- YPO0311 TTGAAGGGAAGTACTGTTCATACCAAATGGC 69 42 TTACCAGTAACTGATCAATATCCCGAGAAACAAAA 69 34 867 ubiA cyr b4040 4-hydroxybenzoate octaprenyltransferase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] Ubiquinone biosynthesis none EC:2.5.1.- YPO0312 CTGCGGGTGCTTAACGGTGTACAGA 70 56 TGGTCTCCGCTGGCATACTGACACT 70 56 255 plsB b4041 glycerol-3-phosphate acyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.11 Phospholipids [9] Glycerolipid metabolism none EC:2.3.1.15 YPO0313 ATGGCGAATCAATCAACAGGACTTACCC 70 46 TTAGCGAGCGACATGCTGCCAG 69 59 372 dgkA b4042 diacylglycerol kinase Degradation 1.A Degradation [18] Glycerolipid metabolism none EC:2.7.1.107 YPO0314 ATGAAAGCACTAACTACCAGACAGCAAGAGGTTT 69 41 TCAGATCCAGTCCCCGTTACGGATAACT 69 50 609 lexA exrA spr tsl umuA b4043 LexA repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO0315 ATGATGAACCCTATCAATCAGGAAAAGCTGC 70 42 TTACTTCTTTTTAACGACGATGGAGTGGTCATG 70 39 513 none putative regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0316 ATGCACGAAGCTCAGACTTTTTCCAGTACG 71 47 CTAACCCCCTACGGATTCGTAGTACGAAGG 70 53 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0318 ATGTTAGAAATTTTCTTTGTGATCGGT 61 30 TCAGTAACGCCGTATCACCGG 65 57 218 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0319 ATGGCAAAGCATATTCAATTTACCACCACG 70 40 TTACGGGATCAGCAAGCTGGAGC 68 57 255 qor hcz b4051 quinone oxidoreductase Degradation 1.A Degradation [18] none YPO0320 AAAAACCAACCAACAAGATGACCGAGC 69 44 CGGACCCGCATAGTTATCAAAACGTGACCAC 74 52 255 dnaB groP grpA b4052 replicative DNA helicase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0321 ATGAAAGCGGCAACAGCAGTCATC 68 50 TTATTCCCCTAGATATTCCATCGCTACGCG 70 47 255 alr alanine racemase (biosynthetic) Amino acid biosynthesis 1.D.6 Pyruvate family [17] Alanine and aspartate metabolism. D-Alanine metabolism none EC:5.1.1.1 YPO0322 GTGTTCCAGAATGTTGACGCCTACGC 70 54 TTACTGTACCGCCGCAAAAGCGAC 69 54 255 tyrB aromatic-amino-acid aminotransferase Amino acid biosynthesis 1.D Amino acid biosynthesis [1] "Tyrosine metabolism. Phenylalanine metabolism. Phenylalanine, tyrosine and tryptophan biosynthesis. Alkaloid biosynthesis I" none EC:2.6.1.57 YPO0323 ATGAATCATTCGGCATTATTGG 61 36 TTACAGATGGGAAGACAGATCCTG 62 46 360 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0324 TACTGGAAAATCTGGCCGCTCAAGG 70 52 AGATAACGTTGTGGCTGATTGGCCC 69 52 255 uvrA dinE b4058 excinuclease ABC subunit A Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0325 ATGGCCAGCAGAGGCGTAAACAAAG 69 52 TTAGAACGGGATGTCGTCGTCGAAA 69 48 549 ssb exrB lexC single-strand binding protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0326 ATGATGATACGTAAAGCGTTTGTTATGGCAGTAAA 69 34 TCATTCCAGATAAAATACTTCGCGCAGAGC 70 43 318 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0327 ATGAGTTTCATGTTGGCACTACCGAAAATC 69 40 TTAAAGTGCCTGTAAGTACAGTGTGCGAATTTGT 69 38 255 none probable alcohol dehydrogenase Degradation 1.A Degradation [18] Methane metabolism none EC:1.1.1.244 YPO0328 ATGCAAGCTATTCTATCTTCCTGGTTTATTCAGGG 70 40 TTAGGCGTCCAGCGCCGC 70 72 825 rhaD b3902 rhamnulose-1-phosphate aldolase Macromolecule metabolism Degradation of macromolecules 3.B.4 Polysaccharides [13] Pentose and glucuronate interconversions. Fructose and mannose metabolism none EC:4.1.2.19 YPO0329 ATGACGAACTCTATTGAACAGGCCTGGG 70 50 TTAACGTTGGCTGAGAATCTGTTGTTCATATTCA 70 35 255 rhaA b3903 L-rhamnose isomerase Macromolecule metabolism Degradation of macromolecules 3.B.4 Polysaccharides [13] Fructose and mannose metabolism none EC:5.3.1.14 YPO0331 AAATTTCTACACTGTTGGCATTGAGAAACAACAGG 71 37 AGGTAATTGACTCAGTGACTGGAATTGCAGCCAA 74 44 255 none hypothetical protein Other 5.I Unknown [1066] YPO0330 YPO0332 TTTTTCTCTTCCAGCTCAGCACCTGTG 69 48 CTAAAGCTGGCTACGCAAATCACGGG 70 54 822 rhaS rhaC2 b3905 L-rhamnose operon regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0333 ATGCGGGCACCACTGCTGTTAGA 70 57 TCACGGTTCATTTTTAGCGGGTAATACCG 70 45 873 rhaR rhaC1 b3906 L-rhamnose operon transcriptional activator Broad regulatory functions 2 Broad regulatory functions [235] none YPO0334 ATGAATAATGCGATTATATTGGGGATAATTTGGC 69 32 TTACGCAGCCATACCCAAACCAACAATA 69 43 255 rhaT L-rhamnose-proton symport protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0335 ATGATGATGATCACAAAATGGCA 62 35 CTAACTTAATAGGCTTATACCTAAGTTACTTCGA 61 32 267 none hypothetical protein Other 5.I Unknown [1066] none YPO0336 GTGCTGCTTACGCCCTTCAATATCGGTAT 70 48 CTAAAGCCATATTCGACTAAAAAGATTCAATTTGT 66 29 303 none insertion element protein (fragment) Other 5.A IS elements; Phage-related functions and prophage [210] none YPO0337 ATGCGTTATTTATTATCTCTGTCTGTTTT 60 28 TCAATGCACGGTAAATTTATGTTTT 61 28 426 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0338 ATGGCTACGTTCAGTGATGGC 62 52 TTATAGATTAAAGCCCCAATGTAATTCA 61 29 168 none hypothetical protein Other 5.I Unknown [1066] none YPO0339 TGGCTTGTCTTTTGAACCGCAAAGA 69 44 GGTGCAACGACTCAACCCCAAAGAT 70 52 255 none enhancing factor (viral) Cell processes 4.I Pathogenicity [38] none YPO0340 GGTGTTGAACATGATCGTGACG 64 50 AGCCACAACCGTCGATATGG 63 55 135 none transposase (fragment) Other 5.A IS elements; Phage-related functions and prophage [210] none YPO0341 GTGCAACGTGAACAAGTTTTAAGTAACGCACT 69 41 TCAGCTTAAGGCACCATTTTTACGGCAT 70 43 576 none putative TetR-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0342 TGAATCCATTTATTGTTGCTGACGCTGA 69 39 TACGCAATACTCTCTGCCGCTTTGC 69 52 255 none putative oxidoreductase Other 5.I Unknown [1066] none YPO0343 ATGAACCGTTTTGTTATCGCTGATATGACTCA 70 37 TTAACGGGCGATACCTGGTGCG 69 59 558 hydN 4Fe-4S ferrodoxin Energy Metabolism Respiration 1.B.7.b Anaerobic [24] none YPO0344 CCCTATTGCGGCTCGGGATGTAAGT 70 56 TTTTGACACGGGATCAACATGGTCC 69 48 255 fdhF b4079 formate dehydrogenase H Energy Metabolism Respiration 1.B.7.b Anaerobic [24] Glyoxylate and dicarboxylate metabolism. Methane metabolism none EC:1.2.1.2 YPO0345 TCATTACTCTGATCCTGCTGCTGTGCAGCGTATTA 74 46 TTATTTTGTAACCGCGGGGGTGTTTT 69 42 255 dsbD cycZ thiol:disulfide interchange protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.10 Thioredoxin [10] none YPO0346 ATGTCTGATTCTGATGCTATGACTGATCCAAATG 70 38 TCAGAGTAATGAAGCGTTGAGCCATGAC 69 46 360 none putative cation tolerance protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0347 AGAATTAGTCATCGTTCTGCTGGCCATTTTTCTTG 73 40 TTACAGAACCAGACCGCCCATCACA 70 52 255 dcuA genA b4138 anaerobic C4-dicarboxylate transporter Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0348 ATGTCAAATAACATTCGTATTGAAGAAGACCTGTT 67 31 GTTTCGCTTTATAGGCTGGGTGCATCAGGTT 73 48 255 aspA aspartate ammonia-lyase Amino acid biosynthesis 1.D.2 Aspartate family [24] Alanine and aspartate metabolism. Nitrogen metabolism none EC:4.3.1.1 YPO0349 ATGATTAAAATTAAGGAGAATACGGTGCGTTGGT 69 35 TCTTTAAAACTATCATCGTTAGAACGACTATTTGC 65 31 603 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0350 ATGAAAATTCGTCCATTGCATGACCG 70 42 TTACGCTTCAACAATTGCCAGAATGTCG 70 43 294 groES hsp10 crpB 10 kDa chaperonin Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO0351 GCGGCGTAAACATCCTTGCTGATGCAG 74 56 CCAGCGCCCATATCAGCACCTTTGTC 73 58 255 groEL mopA hsp60 crpA 60 kDa chaperonin Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO0352 ATGGGGAAAGAAATGCGGATTAATGTG 69 41 TTAAGGGCATTTATAAACTTGACCAACCATTTTAC 67 31 411 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0353 ATGGCAAGCATTGTAACCCGAAACATG 70 44 TTAATTTTGCGTCAGTCTCAAATCCAATGGT 70 35 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0354 ATGGCCAGTTATTATAGCAACGATTTTCGTCC 70 41 TTACTTCACGCGAGAAACATATTCGCCA 70 43 567 efp b4147 elongation factor P Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO0355 ATGGCGGTTTTCTGCTATCTGGGG 69 54 TTATGACGCCAACTTCAAGCCGATAATC 69 43 462 sugE putative chaperone Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO0357 ATGAATCAAGTCCCTAAACGCTCCGATG 70 46 CTACAGCGTCAGTACACCGATAAAAGTGACCA 70 47 357 frdD b4151 fumarate reductase hydrophobic protein Energy Metabolism Respiration 1.B.7.b Anaerobic [24] Citrate cycle (TCA cycle). Oxidative phosphorylation. Benzoate degradation. Butanoate metabolism. Reductive carboxylate cycle (CO2 fixation) none EC:1.3.99.1 YPO0358 ATGACAACCAAACGTAAAGCTTATGTTCGTACC 69 39 TTAGAGTAAGGCGACAGCCAGGATAATCG 69 48 393 frdC b4152 fumarate reductase hydrophobic protein Energy Metabolism Respiration 1.B.7.b Anaerobic [24] Citrate cycle (TCA cycle). Oxidative phosphorylation. Benzoate degradation. Butanoate metabolism. Reductive carboxylate cycle (CO2 fixation) none EC:1.3.99.1 YPO0359 ATGACTGATATGAAAGTCCTGAAAATGGAAGTCA 69 35 TTATTGTGGTTTCAGCATGGCGATCA 70 42 735 frdB b4153 fumarate reductase iron-sulfur protein Energy Metabolism Respiration 1.B.7.b Anaerobic [24] Citrate cycle (TCA cycle). Oxidative phosphorylation. Benzoate degradation. Butanoate metabolism. Reductive carboxylate cycle (CO2 fixation) none EC:1.3.99.1 YPO0360 GGAGGTGCTGGCTTACGTGCAGCAATA 73 56 TTATCCTTTAAATCTTGTGCATCTTTTGCGTCTTT 70 31 255 frdA b4154 fumarate reductase flavoprotein subunit Energy Metabolism Respiration 1.B.7.b Anaerobic [24] Citrate cycle (TCA cycle). Oxidative phosphorylation. Benzoate degradation. Butanoate metabolism. Reductive carboxylate cycle (CO2 fixation) none EC:1.3.99.1 YPO0361 GTGAGTCATTATTCTTTAGGTATTCTTAATATTAT 58 23 TCAGTAATGCATTTGAGGCGG 63 48 192 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0362 ATGAGCGACACGGCAAGCTGG 70 62 TTAGGCGATATTGACGGGGAAGGC 69 54 255 poxA genX b4155 putative lysyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Lysine biosynthesis. Aminoacyl-tRNA biosynthesis none EC:6.1.1.6 YPO0363 ACAGGCACTTGAGCGGACAGAGTTG 69 56 AACCATTGGAACTTCGCCCATTCAA 70 44 255 none putative membrane transport protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0364 AAATTAAACTACAATATTTACTTCCGAAACAAGGG 65 29 CTAGTAAGAAGGGGTAGTAGGAACCGCTTCGG 70 53 882 psd phosphatidylserine decarboxylase proenzyme Macromolecule metabolism Synthesis and modification of macromolecules 3.A.11 Phospholipids [9] "Glycine, serine and threonine metabolism. Glycerolipid metabolism" none EC:4.1.1.65 YPO0365 GTGAGCAAGAATAAACTGTCGAAAGGTCAACA 70 41 TCACTTCTCGTCACTGTCTGACGTTTTACG 69 47 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0366 ATGTTCGCTTGCCACCTGCTTG 68 55 TTAAGATTGAATAAAATGCTCACGATAGTAAGCAA 66 29 684 orn b4162 oligoribonuclease Macromolecule metabolism Degradation of macromolecules 3.B.1 RNA [13] none YPO0367 ATGGCACACCCCCTCGATCTGA 70 59 TCAGGCATCCCGTGGTAGACCCT 70 61 255 none putative iron-sulfur cluster-binding protein Other 5.I Unknown [1066] none YPO0368 ATGACAGACCATAGTAAGAAACAAACCAGAGTCAG 68 40 CTATTTTGCTAACTCAGGATTAATGTACTTCGGAA 67 34 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0369 ATGAAAGAACTCGTTTTACTGTTGCCTGATGAG 69 39 TTACCCTTGCACAGCGGCTAAACG 69 54 471 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0370 CTACGATTCGCCATTTCACTACGATTTGCCATT 73 42 CTTGATTTTATTCACCCGCTCAATCTCACTCATTG 73 40 255 none putative N-acetylmuramoyl-L-alanineamidase-family protein Other 5.I Unknown [1066] none YPO0371 CGGCCTGCATCGGTAGTCAAAGAGTTGGTA 74 53 GAGGAGATTGCACCAACTGCGGACAA 72 54 255 mutL b4170 DNA mismatch repair protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0372 ATGAATGATATTGAGAATCTAGATCGTCCACCG 69 39 CTACACCTTCTGAACTGATCGGTAAGGTAAGGTTT 69 43 606 miaA trpX b4171 tRNA delta(2)-isopentenylpyrophosphatetransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] none YPO0373 ATGGCTAAGGGGCAATCTTTGCAAGAT 69 44 TTATTCAGCGTCATCACTGTCCTGCTG 69 48 306 ymr yersinia multiple regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO0374 TTGTTTGACCGCTATGAAGCTGGTGAGCAG 74 50 TATAACTGACCAACTCCTGCTCTTGTTTACAGAGA 68 40 255 hflX GTP-binding protein none YPO0375 ATGGCGTGGAATCAGCCCG 68 63 TTATTCTCTCCCTACGCGAGTGGAAGTATCAC 70 47 255 hflK hflA putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0376 TTTTTACTTATCGTCGTTGTGGTGTTAATCGC 69 37 TTATGGACGTTTGCTAGAGTTGTCTGGCG 71 48 255 hflC hflA putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] Lysine degradation. Biotin metabolism none EC:3.4.-.- YPO0377 GTGCTGTCACCGTGCATATTGCTAGAGTAC 69 50 TTAGCTCCCCATGTGACTACGCAACA 69 50 309 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0378 GGTAAGAACGTCGTCGTACTGGGCACC 71 59 CATCAAATGGATCACGCAGGATCATGGTTTC 74 45 255 purA adeK adenylosuccinate synthetase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism. Alanine and aspartate metabolism none EC:6.3.4.4 YPO0379 GTGCAGTTAACAAGTTTTACTGATTATGGTTTGCG 70 37 TCAACAAGTAATAGCTTGTAGAGCGGGGAATTATC 69 40 426 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0380 GCGTGTATTGGTCCCAAAAACCAGC 70 52 AGGCTTTATCGTCTGGCTTAGCCGC 70 56 255 rnr vacB ribonuclease R Macromolecule metabolism Degradation of macromolecules 3.B.1 RNA [13] none YPO0381 ATGAGCGAAATTATTTACGGTATTCATGCCG 70 39 TCAGGCTTTCAATCCACGCTGG 68 55 741 none putative methylase Other 5.I Unknown [1066] none YPO0383 ACTCATTTGGTTTTCAATCAGCCGGAGCCTT 74 45 GTTGCACGTTCCAGTAACCGCGCAC 73 60 255 aidB putative acyl-CoA dehydrogenase Other 5.I Unknown [1066] none YPO0384 ATGATAAATATAAAACGCACGATAGCTT 61 29 TTAACGATACAGCAGAGCATTGG 61 43 312 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0387 TTAGCCTCTTTCTTTCGTTCTCAT 60 38 GAGGTTTCTATCAGGGTGATCAGT 60 46 1394 none hypothetical protein Other 5.I Unknown [1066] none YPO0388 ATGAAGTCTCGTAAGGACTTTACCGTCTTCGAATA 69 40 ATATTTTCCCATCAGGGAAACGCAGATCAGAACT 73 41 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0389 TTGCGCTGTCTGATGTTTGT 60 45 TCAGATTGACTTATGTTGACTGATAAGAG 60 34 231 none hypothetical protein Other 5.I Unknown [1066] none YPO0390 ATGAAGAAGCGTTTTTCCGACCAACAG 69 44 TCAGTACTTTCGGCCCAGGGC 67 62 264 none hypothetical protein Other 5.I Unknown [1066] none YPO0391 ATGATGGTTCCAGCTATGCAAGGGG 69 52 CTTCCTCATTATAAGAATCAATTCTTTATCCATCG 66 31 255 none modification methylase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0392 ATGGTGTCTACGTCATTGAAATTTG 61 36 TTATTTATCCCCCTTATGAAAAAACTC 60 30 723 none hypothetical protein Other 5.I Unknown [1066] none YPO0393 TTGCATGACAATGCGCTTT 61 42 TTATATTCTAAAAAAATTATTTAGATCAGCCTCA 61 21 1236 none hypothetical protein Other 5.I Unknown [1066] none YPO0394 ATGTTAACTGAAGACACGGCAGAGGCC 70 52 TTAGTGCTTCTGAAGTTTACTCTTATCCCTAATCC 66 37 288 none hypothetical protein Other 5.I Unknown [1066] none YPO0396 AGCAGAGAGGACTTTTACATGATAAAGCAAATGCG 72 40 TCATATTGCTCTGTTGCGCTGCTGA 70 48 255 none hypothetical protein Other 5.I Unknown [1066] YPO0395 YPO0397 ATGAAATCACCCATTGATATTGGCAGGC 70 43 TTAAAGAGAAATGTGACCGACCCATTCAGTAAG 69 39 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0398 GTGATCGTCGAAGGATATTATCAGTACCCTGG 70 47 TTATTCCTGCGCCATCTTCTCTCTTGC 70 48 255 none M48 peptidase family protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0399 ATGGCAGATAACGCCTCACAAAATAAATCG 70 40 TCAAAAGCCAGTGCCCAGATCGA 70 52 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0400 ATGCCGATTCCTGAGCGTTTAACACC 70 50 TTATAATAGGGGTATCTTAATTCAATCTCTGGAGC 65 34 537 none hypothetical protein Other 5.I Unknown [1066] none YPO0401 ATGACGATTAAACTTATCAGTCAACTGACGGCTC 70 41 TTAAATAACATCTCTTTCCATCATATTACTGCGA 66 29 876 none putative transcriptional regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO0402 ATGACAATTAAGCTGGTCGCGGTAACG 70 48 TTATTTAATGACAATGCTGACGGTTTTGGG 69 37 345 none PTS system; IIB component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] Fructose and mannose metabolism none EC:2.7.1.69 YPO0403 ATGACCAACATCATTGCTATCACCGCTT 69 43 TTTTTCCAAATAGGCGGCAATCTTGTC 69 41 321 none PTS system; IIB component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] Fructose and mannose metabolism none EC:2.7.1.69 YPO0404 ATGAAAGAGCTGATAAATATACTTAAAAATACGCG 65 29 CTAATTTTTAATATCGAAATCCATGTTCACATCGC 69 31 255 none PTS system; IIC component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] Fructose and mannose metabolism none YPO0405 CGTGGGAGATGGCAAGAGCGTACTT 70 56 TCAGTGGTTCATCACGTTGTTCCCC 70 52 255 none putative phosphoenolpyruvate-proteinphosphotransferase Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] Fructose and mannose metabolism none EC:2.7.3.9 2.7.1.69 YPO0406 ATGGATAACATTCATCGCCTATTCTTAGCACTG 69 39 TTACTTCAATAAGAATGACTTTCCTTGCTTAAGC 66 32 492 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0407 ATGCACGTTACTCTCGTCGAAATTAATGTAAAAGA 69 34 CTAAGGCATTAGGCCGATAAATACCGTTTTT 68 39 291 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0408 ATGGCTGATTTAGACGATATCAAAGACGGTAAAGA 70 37 TCAATTTTGTTCATGGAGGAACAGTTGGTAAG 69 37 876 none putative aldolase Other 5.I Unknown [1066] none YPO0409 AAAAATTAGCACTGGTTTGCGCTCTTGG 70 43 AAAAGTCGTATTTACTGATATTTTCTTTGGTGAAG 65 29 255 none putative periplasmic solute-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0410 ATGAATCTCTACCGACGTTATGGATGGGAA 70 43 TCACGCAGAGGCCTTTCGACTG 69 59 255 none putative ABC transporter permease protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0411 ATGCTGAAATTTATTCAGAATAATCGTGAAGGTAC 67 31 TCATAATGCCGCCTTCTTTTTATTGCTAGCT 69 39 255 none putative ABC transporter permease protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0412 GCATACCGTTGCTACACCGCCGC 73 65 TCAGCATGATGCGCCCTTATTTTCAGC 72 48 255 none putative ABC transporter ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0413 ATGCTATTACCCGGATATTTGTATTCG 63 37 TCACAATTTAATGAATAAAAAAATTTTAATTAAA 60 9 312 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0414 TTGGCCTCCCTCAGTATCAGTAGCCG 70 58 TTAAAGTAAGTTAATGATTGCACGCGCCG 70 41 681 none putative transcriptional regulator (pseudogene) Broad regulatory functions 2 Broad regulatory functions [235] none YPO0415 ATGAGTCAACTCGATACGACTACCCCATCA 69 47 ACGTCGTCAACCCACAATCCACCAGC 74 58 255 none putative carbohydrate kinase Other 5.I Unknown [1066] none YPO0416 ATGGCGCATCCCATGATAAATACATCAA 70 39 CTAATTCCCTTTGGCAACTCGCCAG 69 52 255 none putative lipopolysaccharide core biosynthesisprotein Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO0417 ATGACAACTTTATCACCGGCAAT 62 39 CTACGTTGGCAGCCGTTTACC 64 57 1232 none putative O-antigen biosynthesis protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0418 TTGGGTCTATCAGACAGCAATG 60 45 TCACATTGCGACACTAAAAACG 61 41 198 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0419 GTGAAATATATTTATGGAGTGTGCTTCTT 60 31 TCACACTTTTTTATCTGTTTTTTGCG 63 31 234 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0420 GTGAAGATAAAAACAGTAGTCACTCTGCTCATTAC 65 37 TTAGAGACCTCGCTCACGAACCCAAG 69 54 255 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0421 TGAAGGTGCGGTTAACGGCTTCATT 70 48 AGCCAAACATAATCACCACCGCCAT 69 48 255 none putative multi-drug efflux protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0422 ATGAAGTGTATATCTGTCCCTACTAGCC 61 43 TCAAAAGTAGAAGAAGAGGCCTGTT 61 40 333 none hypothetical protein Other 5.I Unknown [1066] none YPO0423 TTGGCGGGGATGCTCCAGT 68 63 TCATGGAGGCGAAAATAACTCC 62 45 348 none hypothetical protein Other 5.I Unknown [1066] none YPO0424 ATGCCAATTAATGCTCTGAGTAAGACACTATTATT 65 31 TTACTGAACGGTCCAGTCTGGAAAAATCATT 69 39 255 none putative pectinesterase Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] Pentose and glucuronate interconversions. Starch and sucrose metabolism none EC:3.1.1.11 YPO0425 ATGCAGAGTAAATTGAATATGAATAGCCACTCCT 67 35 TCAAGGGGAAGACTGTACATTTGATAATTCATCTT 69 34 255 hmsT HmsT protein Other 5.I Unknown [1066] none YPO0426 ATGATTACATCGACACTTGCAGCTTACCGT 69 43 TCATGACACACCACCGTGCATTAGC 70 52 288 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0427 ATGTCAGCATTAACCCCAGCCAGTGA 70 50 TTTTTCTTCGGATCCCGTGGCG 71 55 255 rsmC b4371 ribosomal RNA small subunit methyltransferase C Macromolecule metabolism Synthesis and modification of macromolecules 3.A.1 rRNA and stable RNAs [3] none YPO0428 ATGGCATCAAGACGAGACTTG 60 48 TCAATTTGGTATGCTGTGGCC 63 48 438 "holD, b4372" "DNA polymerase III, psi subunit" Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] DNA polymerase none EC:2.7.7.7 YPO0429 ATGAAGCAGATTTCTATCCTGACG 61 42 CTATGCCATTGGCAACGCC 65 58 444 "rimI, b4373" ribosomal-protein-alanine acetyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] none YPO0430 TGAATATGCTCTGGAAGTCGCGAAAAGACGTACTT 73 43 CGTCCGGGTAACGCTCTTGTGTAATATTGAGATTA 72 43 255 prfC tos miaD b4375 peptide chain release factor 3 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO0431 ATGAAGAGCACACAATTTTCCCGTTCAGT 70 41 TTAAGGCTTGATGTTCAAGTCGTTTTTAACGC 70 37 615 osmY b4376 osmotically inducible protein Y Other 5.I Unknown [1066] none YPO0432 ATGTTTCGTTGGGGCATTATTTTTCTGATTATTG 70 32 TTAAAGGCGCTTACGTCCCGTAAACAGA 70 46 162 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0433 ATGGTGGGATACAGAATACCTATTACGCTCGG 70 47 TTTTTGTCAGATTCGGTGGCAAAGTGAT 69 39 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0434 ATGAGAACGCCAGATAAGCCGATGC 70 52 TCAAGGACGAAGGGGAGGAAGGG 70 61 810 none putative metalloenzyme Other 5.I Unknown [1066] none YPO0435 ATGCTCATGAGTTTGGTCGGGATGG 70 52 TCACAGTGCCAGGAAGAAGCCG 69 59 255 none putative Na+ dependent nucleosidetransporter-family protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0436 ATGACCGATTTAACCGCCTGCG 69 55 TTAGTAGCCGCTGCTGTTGGCGTTACT 70 52 798 deoC dra thyR deoxyribose-phosphate aldolase Amino acid biosynthesis 1.D.3 Serine family [8] Pentose phosphate pathway none EC:4.1.2.4 YPO0437 GTGGCGATTATCGGCCAAACCA 69 55 TTATTCAGTGATACGGCGATAAATCACTGGC 70 42 873 deoA tpp ttg thymidine phosphorylase (pseudogene) Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Purine metabolism. Pyrimidine metabolism none EC:2.4.2.4 YPO0439 TTTATTATGGTATTAGATTCTTTTGGTATTGGTGC 65 29 CTAAAGCATGTTCTTGCCGTAATCCATTGG 70 43 255 deoB drm thyR b4383 phosphopentomutase Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Pentose phosphate pathway. Purine metabolism none EC:5.4.2.7 YPO0440 ATGGCAACGCCACATATTAATGCTGAAAT 69 38 TTACGCGTTATCACCCAGTAACACAGATTCC 70 45 720 deoD pup b4384 purine nucleoside phosphorylase Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Purine metabolism. Pyrimidine metabolism. Nicotinate and nicotinamide metabolism none EC:2.4.2.1 YPO0441 ATGGCACGGGCTAAATTAAAATTTCGACTAC 69 39 CTATTTATCGGCAGGCTTATGGTCGGTTT 69 45 702 smp putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0442 ATGTCTAATAGTCTGACCTATTGCGATCTGCCTTC 70 43 CTACTTGCCACTCTCGTGCTTTAAGCTACCG 71 52 255 serB b4388 phosphoserine phosphatase Amino acid biosynthesis 1.D.3 Serine family [8] "Glycine, serine and threonine metabolism" none EC:3.1.3.3 YPO0443 ATGGCGAAAGCACCCAAACGG 70 57 TTATAAATCTTCTAAAACAGCCAACGCATCGG 69 37 255 radA sms b4389 DNA repair protein RadA Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0444 ATGCTGCAGTTCGACTATCTCAAAACGG 69 46 TTATCGCGCATCCGTTAATACTGAAGGG 70 46 255 nadR nadI pnuA b4390 transcriptional regulator NadR Broad regulatory functions 2 Broad regulatory functions [235] none YPO0445 ATGGGTGAAAATATTTGGGTATGGCAGC 69 43 TTAGTCAGGGTATTTCGCCTGATACCGC 70 50 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0446 AACTTGGGATCAAAATTGGCTAT 60 35 GCTTCTTCCACTCTTCGTATTCAG 61 46 1406 "yjjK, b4391" ABC transporter ATP-binding protein (pseudogene) Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0448 ATGCAGAAAATGCAAAACAAGCGTTTAATACAA 70 30 TTAGGACGCGGTGATAATAATGGCGAC 69 48 507 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0449 AAAAATCACAATAGCGCAGAAAAACTCCCG 71 40 TGTGTTAGTCGTATTCGGCTGATAGGCAAAAATAC 71 40 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0450 ATGACTACCGCTACTTGCGCAACCAA 70 50 TCATCGTGCATTAGCCTTCTTACGGG 69 50 624 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0451 CCCCTCCAGAGGGTAAGGCTTGGTA 69 60 GATAACACCATGTCGGCGGCTTCTT 69 52 255 none putative cation-transporting P-type ATPase Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0452 CTCTTGATGCTCAGCGGCAGCGCTATC 74 59 GTGACGATAGAAAGCGTCATAAGCCAACACATTCT 72 43 255 slt sltY putative soluble lytic murein transglycosylase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Nucleotide sugars metabolism. Aminosugars metabolism none EC:3.2.1.- YPO0453 ATGACAAAACAATTTTTGACTGACGAAAAACAAGT 69 29 TTAGCGTTTGTTGGCTAGCAACTGGG 69 50 393 trpR rtrY putative Trp operon repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO0454 ATGTACCATGTTATCGCTGCAACTACCAATCC 70 44 CTAAATGGCTGGTTTAGAGGGCGATGG 70 52 543 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0455 ATGTTACAGGTATACCTCGTGCGTCACGG 70 52 TTAACGCTGTAATTCATCAAGTGCTGGCATA 70 39 648 gpmB putative phosphoglycerate mutase Other 5.I Unknown [1066] Glycolysis / Gluconeogenesis none EC:5.4.2.1 YPO0456 ATGGATCAAGCCAGTATCATTCGTGACTT 68 41 TTAACGGCGAATTGGAATGAAATAGTCACA 69 37 867 rob putative right origin-binding protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0457 AAAAAGTTGGATATTCCTTGGCTGTTTACTTTCTT 68 31 TTACCAAGGCATGATAGGCACGGC 69 54 468 creA putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0458 CCCCCACATTCTGATCGTAGAAGACG 69 54 TTACTCTTCTAGATCGCCACAGAAACGATAGCC 70 45 717 arcA dye fexA sfrA seg msp cpxC aerobic respiration control protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0459 AGCGCTTTATGCGTGTTGCCGATAT 70 48 GGGCAACATCCATCCCAGAGAGATC 69 56 2460 thrA thrA1 thrA2 bifunctional aspartokinase/homoserinedehydrogenase I Amino acid biosynthesis 1.D.2 Aspartate family [24] "Glycine, serine and threonine metabolism. Lysine biosynthesis" none EC:1.1.1.3 2.7.2.4 YPO0460 ATGGTTAAAATCTATGCTCCGGCATCAATTG 70 39 TTATCCCAGTAGTCGTGCGCCTGC 70 58 255 thrB homoserine kinase Amino acid biosynthesis 1.D.2 Aspartate family [24] "Glycine, serine and threonine metabolism" none EC:2.7.1.39 YPO0461 ATGAAACTGTATAACCTTAAAGATCATAACG 61 29 TTACTTCGGCAATGCCATCA 62 45 1290 thrC threonine synthase Amino acid biosynthesis 1.D.2 Aspartate family [24] "Vitamin B6 metabolism. Glycine, serine and threonine metabolism" none EC:4.2.99.2 YPO0462 ATGATGCTTATTATTATCTCCCCGGCCAA 69 41 TTAGTGCTGTTCAGCCCGTTTAAACACG 70 46 780 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0463 ATGCCAAAAGTTCATGCACAAACGATG 70 41 TTACAACAAGTCGGAGATCATTTTCTCAAGTTTG 69 35 255 talB transaldolase B Energy Metabolism Pentose phosphate pathway 1.B.5 Pentose phosphate pathway [3] Pentose phosphate pathway none EC:2.2.1.2 YPO0464 TATTACGTATAGGTTTAGTCTCAGTTTCAGATCGG 65 37 TTAGTCTTTTATATCGATAATGGCACTTTTTGGGC 69 34 588 mogA mog chlG molybdopterin biosynthesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.4 Molybdopterin [9] none YPO0465 ATGTCTCAAGATCACAATTCATCTCAAGTCGG 70 41 TTAATTAACTCCGTTCATCACCCTTTTAGGCA 69 37 255 none putative transport protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0466 TGGCATGATTCTCGTTTAGTCAAT 62 38 ATTTGACCACCACATAAATTTCCC 62 38 1471 none hypothetical protein Other 5.I Unknown [1066] none YPO0467 ATGAACACCATCAAGTTGGCGAATCCT 70 44 TTACATTACAGCTTGGGTCTCTAAGGTTTGGCT 70 42 612 yaaH putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0468 GTACTAAAGCACGTGTGCTGGAAAACAGCGAA 73 47 CATCACCGCCTGCGGCAGCT 73 70 255 dnaK grpF groP seg chaperone protein DnaK Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO0469 ATGGCGAAGAGAGATTATTACGAGGTTTTAGGC 70 42 TTAGCGTGTCAGGTCGTCAAAGAATTTTT 68 38 255 dnaJ groP chaperone protein DnaJ Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO0470 GTGACAAATATCATTCGTCAATTTTTACGCCA 69 34 TTACCTTACGTTAACAGCCTTCCGCCG 70 52 255 nhaA ant b0019 sodium-proton antiporter Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO0471 ATGCGAATGTCACATATTAATTTCAATCATCTTT 67 26 TTAACAGTTAAACAACGCTGAAAAATCTTTGTTAC 66 29 900 nhaR antO b0020 transcriptional activator protein NhaR Broad regulatory functions 2 Broad regulatory functions [235] none YPO0472 TTGGCTAATATCAAATCAGCTAAGAAACGCG 69 39 TTACTGCATTGCGTTGATTTGCGC 69 46 264 rpsT b0023 30S ribosomal protein S20 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0473 GTGAAACTGTGGAATTTTCTTTCG 61 38 CTATTGAGGACAATTCAAAGGCC 61 43 177 none hypothetical protein Other 5.I Unknown [1066] none YPO0474 ATGGAGCTAATTCGCGGTATACATAATATCCGG 70 42 TTAAACCGGTGTCTTTAGCCCGAAAAATG 70 41 255 ribF b0025 riboflavin biosynthesis protein (includes:riboflavin kinase and FMN adenyltransferase) Biosynthesis of cofactors; prosthetic groups and carriers 1.G.9 Riboflavin [6] Riboflavin metabolism none EC:2.7.1.26 2.7.7.2 YPO0475 TTTTATTCGTCTGGGCGTGTTGGGT 70 48 ATTCATACTTTCGTTGCCCGCCAAA 69 44 255 ileS ilvS b0026 isoleucyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] "Valine, leucine and isoleucine biosynthesis. Aminoacyl-tRNA biosynthesis" none EC:6.1.1.5 YPO0476 ATGAATAAACCTATTTGCTCGACCGGATTG 69 40 TCACTCATCGTTATTCACCGCGTTTTT 69 41 510 lspA b0027 lipoprotein signal peptidase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] Protein export none EC:3.4.23.36 YPO0476a ATGAGTGATATGTCCGAATTTGTGCAAGATACC 70 39 TTAGCCAGCAATATCTGCATAGACAACCTCC 69 45 534 fkpB slpA b0028 FKBP-type peptidyl-prolyl cis-trans isomerase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO0477 ATGCAGATATTGCTGGCTAATCCACGTG 70 46 TCAGTCGATCTGTTTAACCTCAACACGC 69 46 255 lytB b0029 LytB protein Other 5.D Drug/analogue sensitivity [28] none YPO0478 GTGTTTACTCAATATGTATTTACTGACGAAA 60 29 TCAATTGAAGGGGAAACGTG 61 45 165 none hypothetical protein Other 5.I Unknown [1066] none YPO0480 ATGACTGATTCAACAATTCGTATTGCTATTGTCG 70 35 TTAAAGTTCGTTAAGATTCAGTACATCACGCA 67 34 822 dapB b0031 dihydrodipicolinate reductase Amino acid biosynthesis 1.D.2 Aspartate family [24] Lysine biosynthesis none EC:1.3.1.26 YPO0481 TTGATTAAGTCAGCGCTATTGGTTCTCGAAG 70 42 TTATTTATGGCTGTTACTACAGTTAAGACTCACGG 66 37 255 carA pyrA b0032 carbamoyl-phosphate synthase small chain Amino acid biosynthesis 1.D.1 Glutamate family [19] Pyrimidine metabolism. Glutamate metabolism none EC:6.3.5.5 YPO0482 AGCGTCAGGGTGTTCTGGCAGAATT 69 52 ACAAATGGCATCGACATCCACTTCG 69 48 255 carB pyrA b0033 carbamoyl-phosphate synthase large chain Amino acid biosynthesis 1.D.1 Glutamate family [19] Pyrimidine metabolism. Glutamate metabolism none EC:6.3.5.5 YPO0483 ATGCAAAGAATGCTAAGTGGCGTTATTATCG 69 39 TTAGCCCAAGGCGACTTTGATGCC 70 54 678 none putative LysE type translocator Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO0484 ATGAGCCTGGAGAATGTAATAAACGGTGATGT 70 41 TCACGCCCACCCCCGCA 73 76 801 yjjP b4364 putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0485 GTGGGCGTGAGTTTACTGTGGGCAT 70 56 TTATACACCAGGGCGTTTACGATATAACCATAATC 68 37 462 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0486 ATGATTATCAGCCTGATCGCTGCATTG 69 44 TTAGCGGCGCTCTAGAATTTCGAAGC 69 50 483 folA tmrA dihydrofolate reductase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.2 Folic acid [9] One carbon pool by folate. Folate biosynthesis none EC:1.5.1.3 YPO0488 ATGAAAGTGAGAGATAATAAGGTTCTGG 61 36 TTACTCGACAGCCACCCCA 63 58 222 none hypothetical protein Other 5.I Unknown [1066] none YPO0489 ATGAAAAAATCTATGCTGTTTTTATCTCTAA 60 23 TCACTGTCTATTTTTATAATCATCTACAACATC 61 27 465 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0490 ATGTCTACTTATCTTATTGGTGATATTCATGGCTG 66 34 TTAGTGTTGTACTGCTTCGCCCGCTG 70 54 870 apaH b0049 bis(5'nucleosyl)-tetraphosphatase Purines; Pyrimidines; nucleosides; nucleotides 1.F.5 Miscellaneous nucleoside/nucleotide reactions [9] Purine metabolism none EC:3.6.1.41 YPO0491 ATGATTGAACAGCCCCGTATTTGTGTG 69 44 TTAGTGGATCAGGGCTGGGATCGC 71 58 378 apaG corD ApaG protein homologue Other 5.I Unknown [1066] none YPO0492 ATGAATAATAGAGTCCACCAAGGGCATTTTGC 70 41 TTATTTCTGCGGTGTCGATTGAGCTGA 70 44 819 ksgA rsmA b0051 dimethyladenosine transferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.3 Ribosome maturation and modification [6] none YPO0493 GAAGAGATCGATACAATTATTCCTGCCCTGAA 69 41 TTATTCATTGCTGTTATTTATCATTTTGATGGCT 67 26 333 pdxA pyridoxal phosphate biosynthetic protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.6 Pyridoxine [4] none YPO0494 GAACTGGAGAACGCTTATTCTCGGATTGGTCATTT 74 43 TTATTGTGGTTGTGCATTACTACCATCAAGAATTT 68 31 255 surA b0053 survival protein SurA precursor (peptidyl-prolylcis-trans isomerase) Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO0495 CTGCCGGTCCGTATTAATGCGGATA 70 52 GCCAACTAACTGGCTGGCAGGTTGT 70 56 255 imp ostA b0054 organic solvent tolerance protein precursor Other 5.F Adaptions and atypical conditions [36] none YPO0496 ATGCGGTATTGGGGAAAACTGCTCG 71 52 TCACTTAAACCCTTTCTCGCGTTTGATCA 70 41 834 djlA b0055 DnaJ-like protein Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO0497 ATGATCGTTTTGTATCAAGATAAGCACATCATGG 70 35 TCAAAATTCCGCTTCACATTTGAAATGC 69 36 621 rluA ribosomal large subunit pseudouridine synthaseA Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] Pyrimidine metabolism none EC:4.2.1.70 YPO0498 ATGAGAAAGAAGCTATATAATGACTTCGC 62 34 CTAGAGGAAGTTCAGGTAGCCGT 60 52 744 none hypothetical protein Other 5.I Unknown [1066] none YPO0499 ATGGACAATAATATGAGTGACATATTTCCTCAAGC 67 34 TCATCGAAACGGTAGGTTAGTTTTTCCGG 70 45 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0500 ATGGCCAAAGATGCGAGCT 63 53 CTATTTTTCTCCATCGTCATCTTCC 61 40 561 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0501 CAACTCAATGACACGCCAGACATCAACG 72 50 TGTTGGATGGAAGTTTAGAAACCAGCCGCA 74 47 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0502 ATGGCAGCTTTAGTCGATTACTTTCTCCATATCG 70 41 TTAAATACGGCTGTTCAATTTCAGATCGTAACCA 70 35 519 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0503 ATGGATATTTCAGCACCGATACTTTTTGACAAATT 69 31 TTAAAGAACGCGAACCATTCCATAGGAGTAATC 70 39 444 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0504 AGTTGCGTTATCTGCGTGAAGATGGGCA 74 50 GCGAAGGTTTCACCATCAACCTGCATG 73 52 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0505 ATGGTGAAACCTTCGCCAAATGGG 70 50 CTAGGTAACCGTTCTATAAATTGGCTGTATACTCA 65 37 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0506 CGGACTGAGCCAGACGGTTATCTCC 70 60 GATCTCTTCCGCGCCCTGATTACAG 69 56 255 clpB htpM putative Clp ATPase Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO0507 CGCAATACATTACAAACCCATAT 60 35 CTACCCGTAGTACTGACGCTACAA 60 50 1400 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0508 ATGCGCATCATTCGCCCG 68 61 TTAAGGATCGGTCATGGTCGAGGC 69 54 573 none hypothetical protein Other 5.I Unknown [1066] none YPO0509 ATGGCTCCGCCAGGGCAGT 69 68 GGGATCCAGTGCGTCTTTTCCGTCAAAC 74 54 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0510 ATGACACCGTCCGACACCCCTATTATG 70 52 CTAGACATAGCGGCTGGCTCCTGAAG 69 58 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0511 ATGTCTAGATTAACCACGTTGCTAAAACCGAAAAA 69 34 TTACCCCATATGAACCTGTCCGCC 68 54 618 none hypothetical protein Other 5.I Unknown [1066] none YPO0511a ATGACAGCAGCCAATACTCGC 63 52 CTACGCATTGACAAAATACTTGGTC 61 40 366 none hypothetical protein Other 5.I Unknown [1066] none YPO0512 ATGCGTAGCCTCTTTCGTGTGTTGC 69 52 CTACTTTGTTGACGCTTTTAATGACAGGGCC 70 45 492 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0513 ATGCTGCCAAAACAACGTGTTGCTT 69 44 TCATCCGAGCCTTCCTTGTCGC 69 59 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0514 GACAGCTATCCAAACGGGAATAAC 62 46 GTTGGGTATTCGTTCCTTGAACTT 62 42 1335 none putative OmpA-family membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0515 GGATATTGGACCGACGCAGGACTGT 70 56 GCGGGCAGTCGTGAGCTTATTACGT 70 56 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0516 ATGCTAGATCCTAAAAACATCCAGAATGTATTGAA 67 31 CTACATTTTGGGCAATTTATCAAACATACTTTTCA 68 29 354 none hypothetical protein Other 5.I Unknown [1066] none YPO0517 ACTGTTCCCTGCAACCGGTGAAAAC 70 52 CATGTTCGCCACCGTTAGAGTGCAT 70 52 255 rapA hepA RNA polymerase associated helicase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO0518 CTCGCGCTGACTGATTTTCACCAAC 69 52 AGCTGATCCACCCGCCATTTTGATA 70 48 255 polB dinA DNA polymerase II Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] DNA polymerase none EC:2.7.7.7 YPO0519 ATGGAAGCCTATTTATTACATTTATTGACGCAATC 68 31 TTACCCAGCCAAGACTTTCCACAACAGAT 69 45 768 none putative DedA-family membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0520 ATGCTAAAGCTTGAGAAAATCACCTATTTGTATGA 67 31 TCAAGATATAACGGCACTTTTGATACCCAGTACG 70 41 711 thiQ thiamine transport ATP-binding protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0521 ATGGATTCAGGCATGGCAATCCG 70 52 TTCAATAAGGGTAAACAGCAGGAAGCAGAGCAACA 74 43 255 thiP thiamine transport system permease protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0522 ATGATAACGACTGTATCATCACGGATACCAATGTT 70 37 TTAACGGCTGACGGCGGATTG 69 57 255 tbpA thiamine-binding periplasmic protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0523 ATGGCATGGTTATATATTTCACTGTCA 62 33 TCATTTTTTATTGTAAAGTTTTTTATATGCG 61 19 285 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0524 CTACCTCGCGCCTGCAACAACAATTTATTCGT 74 47 CAGCCGAGTGTATTCATACGCACTCCC 71 56 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0525 TTGTTAGCTGCGCGCACTC 64 58 TCATTGGCGTTGCAGGTAG 61 53 174 none hypothetical protein Other 5.I Unknown [1066] none YPO0526 ATGAGATCTGCACGAGCCTTT 61 48 TCACTTTTCATCCGTCGTTGAC 62 45 "setA, sotA" sugar efflux transporter (pseudogene) Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0530 ATGGCAAAATTTATTCAACACATTGGTTTGGT 70 31 TTAACGTAGAAATTCAGGCTGTTGTTTTTCGTATG 69 34 603 leuD 3-isopropylmalate dehydratase small subunit Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Valine, leucine and isoleucine biosynthesis" none EC:4.2.1.33 YPO0531 ATGGGCACAACATCATCTCAGAGCAA 69 46 TTAGTGGGTGGTGGCGGATAATTCG 70 52 255 leuC 3-isopropylmalate dehydratase large subunit Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Valine, leucine and isoleucine biosynthesis" none EC:4.2.1.33 YPO0532 ATGACGAAGACTTATCATATTGCAGTGTTGCC 69 41 TTATACCCCTTCAACCACGAATTTAGCGATG 70 42 255 leuB 3-isopropylmalate dehydrogenase Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Valine, leucine and isoleucine biosynthesis" none EC:1.1.1.85 YPO0533 TGATACAACATTGCGCGACGGTGAACAAG 74 48 TTATTTTGTTGCAGACGCTGCTTCTCTTTTTCGAC 74 40 255 leuA 2-isopropylmalate synthase Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Valine, leucine and isoleucine biosynthesis. Pyruvate metabolism" none EC:4.1.3.12 YPO0535 ATGTCTGAATACAACTTAGTAACTGACAGTCAAGC 65 37 TTAAACGGGAGAACTAAATTGCCCGAGTAAC 69 42 255 leuO LysR-family transcriptional regulator LeuO Broad regulatory functions 2 Broad regulatory functions [235] none YPO0536 ATGACGGAGACTCCCGCTA 61 58 TCATAAAGAATTACCGCTCGCT 60 41 207 none hypothetical protein Other 5.I Unknown [1066] none YPO0537 CAGTGACCGTTCAGAGCTGGTAGCCTTTCGT 74 55 ATAGCGTTGAAGAATGATTTTCCGCCGC 72 46 255 none putative AMP-binding enzyme-family protein Other 5.I Unknown [1066] Fatty acid metabolism none EC:6.2.1.3 YPO0538 GTGTTAAGTCTCACACTGGTCGC 61 52 TCACTCGTTGGATTCAGTAGAATG 61 42 111 none hypothetical protein Other 5.I Unknown [1066] none YPO0539 GTCAGGAGCCGAGATGGTGGTCCGAT 74 62 GCATCGGGTAAACATGTTCTGTTTCATCGACAGT 74 44 255 ilvI acetolactate synthase isozyme III large subunit Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Valine, leucine and isoleucine biosynthesis. Butanoate metabolism. C5-Branched dibasic acid metabolism. Pantothenate and CoA biosynthesis" none EC:4.1.3.18 YPO0540 ATGCGCCGCCGGATTTTATCA 70 52 TTAACGCATGATTTTGTCACCACGC 68 44 495 ilvH acetolactate synthase isozyme III small subunit Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Valine, leucine and isoleucine biosynthesis. Butanoate metabolism. C5-Branched dibasic acid metabolism. Pantothenate and CoA biosynthesis" none EC:4.1.3.18 YPO0542 GTGTCTTTTCAGCCGAACTTATCG 63 46 TCAGTTCATCAGGATCGTTCG 61 48 117 none hypothetical protein Other 5.I Unknown [1066] none YPO0543 GTGAAACTGGATGAGATCGCGCG 70 57 CTACCTGCGGCTTAGGCTTAGAGTGCC 70 59 255 fruR cra shl fruC putative fructose repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO0544 ATGACAATGTTTTCAACTGGGCCTCGT 70 44 TCAAACATAACCTGCAACGCGGAA 69 46 447 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0546 ATGTTTCGTGGTGCAACAATGGTTAACC 69 43 TTATAGCGATAAGCCCTGTAGCCGCTCA 70 50 459 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0547 ATGGTAGACAACAACAAAACGGTAGATAACAACT 66 35 TCACTCACCGATCCTCTCAGCAAAAC 68 50 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0548 GTGATAGGCAACGAGCGTCATGGTTTAG 69 50 TTATTTAATCACAATGTTTTCTTGTGATGGATCGA 69 29 318 ftsL mraR putative cell division protein Cell processes 4.C Cell division [24] none YPO0549 GGATGCATTAGAAATCCCTTTAGA 60 38 CCACCTGAACCCTCTTTTGTATTA 61 42 1416 "ftsI, pbpB" penicillin-binding protein 3 Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO0550 GTGGCAGATCGTAATTTGCGCGA 70 52 GCGCGACGGTGACACGGTCTGAATA 74 60 255 murE UDP-N-acetylmuramoylalanyl-D-glutamate--2;6-diaminopimelate ligase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Lysine biosynthesis. Peptidoglycan biosynthesis none EC:6.3.2.13 YPO0551 ATGATTAAGGTCTCTCTGCGTTTTCTGGCTAG 69 44 CTAACATGATGCCTTCTCCTGTAACGCAC 69 48 255 murF mra UDP-N-acetylmuramoylalanyl-D-glutamyl-2;6-diaminopimelate--D-alanyl-D-alanyl ligase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Lysine biosynthesis. Peptidoglycan biosynthesis none EC:6.3.2.15 YPO0552 ATGTTAGTTTGGTTGGCTGAATACTTAGTGAAATT 66 31 TTACCGCACCTTCAGCGTCGC 69 62 255 mraY murX phospho-N-acetylmuramoyl-pentapeptide-transferase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Peptidoglycan biosynthesis none EC:2.7.8.13 YPO0553 AAAAAGTGGTCATCATCGGGCTGG 69 50 TCAGCCTAACTCCTCTGCCAGACG 68 58 255 murD UDP-N-acetylmuramoylalanine--D-glutamate ligase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] D-Glutamine and D-glutamate metabolism. Peptidoglycan biosynthesis none EC:6.3.2.9 YPO0554 ATGCGTATGCCGGGGCTGG 70 68 TCATCGGGCACTCCTTACAAACGC 70 54 255 ftsW cell division protein FtsW Cell processes 4.C Cell division [24] none YPO0555 ATGAGTGGGAAGACCAAGCGTTTGATG 70 48 TTACGCTGACTTACTGGCCGCAACC 70 56 255 murG UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosaminetransferase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Peptidoglycan biosynthesis none EC:2.4.1.- YPO0556 ATGAATGCAGGCTGTGAATACATGACAGAC 69 43 GCAATTTATGCTCAGCCAATTTACGGGCAATTT 74 39 255 murC UDP-N-acetylmuramate--alanine ligase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] D-Glutamine and D-glutamate metabolism. Peptidoglycan biosynthesis none EC:6.3.2.8 YPO0557 ATGGCTGAGAAAGTCGCGGTATTGC 70 52 TCAGTCAGCCAACATCAGAATGCG 68 50 255 ddlB ddl D-alanine--D-alanine ligase B Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] D-Alanine metabolism. Peptidoglycan biosynthesis. Glycerolipid metabolism none EC:6.3.2.4 YPO0558 ATGTCGCAAGCTGCCTTGAAT 64 48 TTACGGATTACTGTTCTGCTGGC 63 48 ftsQ cell division protein FtsQ Cell processes 4.C Cell division [24] none YPO0559 ATGATCAAGTCGACGGACAGAAAACTGGTA 69 43 TTAAAACTCTTTTCTCAGCCAGCTATTGATACGTT 68 34 255 ftsA divA cell division protein FtsA Cell processes 4.C Cell division [24] none YPO0560 ATGTTTGAACCTATGGAACTAACCAATGACGC 70 41 TTAATCGGCTTGCTTGCGCAAAAA 70 42 255 ftsZ sfiB sulB cell division protein FtsZ Cell processes 4.C Cell division [24] none YPO0561 TTGCGAGATAAAATGATGATCAAACAAAGGACT 69 33 TTAGTAAGCTAATACTGTAGACGGTGCTTTGAATG 66 37 255 lpxC envA asmB UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosaminedeacetylase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO0562 ATGCGTGAAAACCGCCCACAATTATTA 70 41 CTACTTATCACGCTTGGTTGCGTTGGC 70 52 525 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0563 GTGATCGGTATTCTAAATCGTTGGCGACA 70 45 TTAGCTTAAGTTGGCAGGACCGGCA 70 52 534 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0564 GTGAAGCGAGTAAGCGTGTGTTCGG 69 56 TCACGCAAGGTTTCCTCATGCAGTT 69 48 255 secA prlD azi pea preprotein translocase SecA Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] Protein export none 3-hydroxymyristoyl YPO0565 ATGAAACACTTACAAATTGCTGTTGGGATCATT 69 33 TTATTTTGTTAATAATTCAATAATTGCGGCATTAG 65 23 387 mutT mutator protein MutT Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] Starch and sucrose metabolism. Folate biosynthesis none EC:3.6.1.- YPO0568 ATGCTAGTCGCTCGTATTCTCATGCTTATCATC 69 42 TTACCACTTTTTACCCAGTAAGCGGTCGA 69 45 372 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0569 TTGAGCCGCCACCAGCTAGCAT 70 59 AAAAAGTGCGGCGAAACAGTTGAAGG 70 46 285 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0569a ATGGCAGAGCAACCTCGCACTCA 70 57 TCAATGGTCTTTCTCCAGTAACTCGCG 69 48 396 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0570 ATGCCACAAGATAAAACCTCTGAACATTTACGTG 70 38 TTAACGGCGAGACAACAGAACGCC 70 54 306 yqjD putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0571 GTGTTAAATGCTGAGTTTCTGTTATTTTT 61 28 CTACTCCTTAAGCATAACCGAGGTG 62 48 147 none hypothetical protein Other 5.I Unknown [1066] none YPO0572 ATGTTGTTACGTCGATCTCTCCTGCTAGCTTTAC 69 44 TTAGTGTTGCTGAGATTGTGCTTGTTGTAGCTC 70 42 381 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0573 GTGATCAACTTTAGGGGCCGTTTTGG 69 50 TTATCCTAAGTTTTGTTGATTACTTCTGAATACGG 65 31 390 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0574 TGGATATCATTAAAGAACTCTTACATGCTCTATGG 66 34 TCACTCTGACTTACCTTTCTTATTGTCATGACTGA 68 37 699 yqjA putative DedA-family membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0575 TTGGGAGCGAAACGCAAAT 64 47 CTATGCAAGCATAAAAACCATCG 61 39 555 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0576 ATGGAATTCACAGAAACCAGACGGTTGTAC 69 43 TTAATTTTTGCTGCTGATAGGGACTTTGCTGT 70 37 795 exuR exu regulon transcriptional regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO0577 ATGCAACCAGTAGCCGGTTATGTATTGGA 70 45 TCAGTTTTGTCCAACCGGCGG 69 57 255 exuT ExuT transport protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0578 TTGATGGTGGCGTTCCATG 64 53 TTACTGCAAACGGCTTAAGACC 61 45 171 none hypothetical protein Other 5.I Unknown [1066] none YPO0579 ATGTCGCAGTTTTTGACCGAAGACTTTTTG 70 40 TTACAGTTCGATGGCGAAATATTGCTGC 70 43 255 uxaC uronate isomerase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions none EC:5.3.1.12 YPO0580 ATGCAAACGCTGAACCGTCGTGACTTTC 73 50 CTATATGCCGCGACCGCCGCTC 73 68 255 uxaB altronate oxidoreductase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions none EC:1.1.1.58 YPO0581 ATGCAAAATATTATAAAGATTCACCCGCTGGATAA 69 31 AGCAAGGTATCCATTGAGGTGCCATG 69 50 255 uxaA altronate hydrolase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions none EC:4.2.1.7 YPO0582 ATGACCTTTTATTGGTTTGCTCAAGCCG 70 43 TCAGGCCTTTTTCTCAATCTCAAAAGGATCTATT 70 35 531 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0584 ATGAAGGGTATAAACGGGCAGAACATATTAAATTT 68 31 TTAGACTGACTTACCCGCTGCCAGTGG 70 56 255 none putative symporter protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0585 ATGATTCGCTTCGCTGTTATTGGCAC 69 46 TTAACTCGCGGCGGGGTATTGAGTA 69 52 255 none putative MocA-family oxidoreductase Other 5.I Unknown [1066] none YPO0586 ATGTCGGTATTGACCTATCTACAAGGTTATCCAGA 69 40 CTAATACGCATAAATCGAGCCAAACAAATCTAAGT 68 34 510 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0587 TCACCGAGACAACGATCAGCTCAGA 69 52 TGATCGGCGAACCAAGTTGCGTATA 70 48 255 none putative autotransporter protein Other 5.I Unknown [1066] none YPO0588 ATGAGCCAACTCGATCTGGGAACG 69 54 TTAGAAATCGCTATATGACATATCGAGACTACCGG 69 40 255 none putative methyltransferase Other 5.I Unknown [1066] none YPO0589 TCACCTGTTCACCCCGCTTGATCTT 70 52 CTAGCGCTAGGCGGGTACCCTGATC 70 64 255 fadH fadH1 2;4-dienoyl-CoA reductase Degradation 1.A Degradation [18] none YPO0590 ATGCTTAATATCGATCAAAAATACCTAACGAACCT 67 31 TTAGCTGCGTTTAAATAGACTAGCAACCATAAAGC 68 37 570 hdeD putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0591 TTGATTACTCAGTGGAATATTTACGGT 60 33 TTATTCAATGGCCTGGGTAGG 61 48 234 none hypothetical protein Other 5.I Unknown [1066] none YPO0592 ATGGCGAATATTGTTACCTGTACGACAAAAGATG 70 38 TCAATTAGCGACAAGCTGAACCACCAC 69 48 255 none putative kinase protein Other 5.I Unknown [1066] none YPO0593 GATTTACGCCAAGACGATGTGTACCAAAAGGTG 73 45 CTGGAGAGAAAAAGTTTAGCCATTCCGCCAAC 73 47 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0594 ATGAGAAGACTGCCTATTTTCTTTGTTCTGGACTG 70 40 TCAGCCCTCTATCACACCACGGG 69 61 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0595 ATGCCATTGGTGAGCCTTCTGATTCTG 70 48 TTACAGTACCAACTGAATTTCTGGGGGCG 71 48 702 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0596 ATGTCAGTCAGTTTGCATAAAGGACAAGGC 69 43 TCAGAGGTAGTTCTTAAGATGAGTGACAAAGGTGT 68 40 642 terX putative tellurium resistance protein Other 5.I Unknown [1066] none YPO0597 ATGAGAAGACTACCGGTTTACCTGTTGCTTGATA 69 41 TTATAAGACAACATTCACTTCCGGTGGTGGT 70 42 639 terY putative tellurium resistance protein Other 5.I Unknown [1066] none YPO0598 ATGTCGCGTTTTTATTATTCTATATTAGTGGCTGG 68 34 ATTCAGGTTAAAACCCACCGCCAGCGAAT 74 48 255 none putative hemolysin activator protein Other 5.I Unknown [1066] none YPO0599 ATGAATAAAAACCTGTACCGTATTGTTTT 61 28 CTGGGTCTGGTTGACACCGCG 70 67 none putative adhesin Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO0600 ATGAAGAACCTCCTTTATGTAGTTTTATTAATG 62 27 TTAAAATCCCTTAATTTTAAAAATACGTAACA 61 19 234 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0601 ATGAGCATGGTGGTGGTCG 63 58 TCACCGAAAGCGGGAGCAA 67 58 228 none hypothetical protein Other 5.I Unknown [1066] none YPO0602 GTGAGGTTCGCTGATATGTTACTTAGT 60 41 TTATGTATAAAGACTATCGTCGTAAGGCG 63 38 432 none hypothetical protein Other 5.I Unknown [1066] none YPO0603 GTGCGCCGTACCTATAAAGGTAAGTTGTGG 69 50 TCACTCCATCAGCACGATATTGCCG 71 52 756 none putative hemagglutinin/hemolysin-related protein(partial) Cell processes 4.I Pathogenicity [38] YPO0599 YPO0606 CTATTGGTCCACTCTGCGTAATC 60 48 CCGTAGTAGGTATTGCTGTCACTG 60 50 1392 yapF putative autotransporter protein Other 5.I Unknown [1066] none YPO0607 ATGAAGAGATTGTTACTGTCGGCGCTGTT 70 45 TTAGAAATTAAGGATAAAGCCGACTTTGGCGA 70 37 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0608 TGATTAATAAAAGAAAAATTGTCCTCGCCGCTAT 69 32 AGAGAAGAGCTGGAGAGACCATCCAATGGTTTGTA 73 46 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0609 ATGTTACATAACGTCAATAAAATATATCCAAACGG 65 29 TTTTTCGCTTTCTTTATCGAAAAGATGGCA 70 33 255 none putative transporter ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0610 CGCAGGATGAAATCATCTGGCAGAC 69 52 GCCACGATATGGTCTATCTGCCGCT 70 56 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0611 GTGAGTGTAACGATTAAGGATGTTGCTAAAAGGG 69 41 CTATAGCGTCTCTCTTTCAATCAACTCGGTTG 69 44 255 none LacI-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0612 ATGAAGATACTTTATTATATTGCCATCGCGATAG 66 32 TCAGTGTTCATTGAGCAGTTGGCGT 69 48 255 none putative sugar binding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0613 ATGATGGGCTACCTGTTTATTGCGCC 70 50 TTAGCTGTGCTCCTTTTCCTGAGTAAATTTCAATT 69 34 864 none putative permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0614 AAAAATCTGTTGATTTATAGCCTGTTGATCATCAT 67 29 TCATTTCACTCCGATACCGGTGAACG 70 50 819 none putative permease Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0615 ATGATGAGTGGAAAGAAAGGGTTCTTTGC 68 41 TTAGCTATCGGTATTGCAGCCAGCATC 68 48 516 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0616 GCAACACCGTGACGACTATCTTGCC 69 56 ACAAATACGCTGATACGCGACGGCT 70 52 255 none putative glycosyl hydrolase Other 5.I Unknown [1066] "Cyanoamino acid metabolism. Starch and sucrose metabolism. Flavonoids, stilbene and lignin biosynthesis" none EC:3.2.1.21 YPO0617 AATAAGCCTGACTTGCTCGATATT 60 38 TGTGCATCAGTACTCATTTGTTGA 61 38 1401 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0618 CGGCATAATCCGTCAGGCGAAAGCTG 74 58 GATTAATAGGTGATAACTCTTGCCGTAAAGACCCG 70 43 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0619 ATGAATAAACAACAAGGGAGTGGTCGTAAGC 69 42 TCAGCAACCGTCGTCATTTCGC 69 55 255 none putative HlyD family secretion protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0620 ATGACTTCTCTCAGGAAGCTGC 60 50 TCATCGCGTAAACAGTAATAGGG 60 43 327 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0621 GTGGAAAATAACACACTGGCTAACC 62 44 TCATTGAACAGCCTCAATTAACG 61 39 201 none hypothetical protein Other 5.I Unknown [1066] none YPO0622 GTGAGTGATGCGGCATTGA 62 53 TCATCTACCGGCGAAAGATAAC 60 45 108 none hypothetical protein Other 5.I Unknown [1066] none YPO0623 ATGAATACGATTAGAAGAAAAATGCGTCCAGAGTT 69 34 TTATCCATGGCAGATCCCCTTTTCCTT 69 44 255 none putative aminotransferase Other 5.I Unknown [1066] "Glutamate metabolism. Alanine and aspartate metabolism, Cysteine metabolism. Arginine and proline metabolism. Tyrosine metabolism. Phenylalanine metabolism. Phenylalanine, tyrosine and tryptophan biosynthesis. Carbon fixation. Alkaloid biosynthesis I" none EC:2.6.1.1 YPO0624 ATGGATAATGAAGGACTCATTTTTCGCGG 70 41 TTTAGGGGGAGACTCTTGACTAATGAACCATCTTT 70 40 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0625 ATGGTTAACATGATGGAATGTATCAC 60 35 CTAACTTTTTGAAAAATAATCATTAAGACCA 61 23 447 none hypothetical protein Other 5.I Unknown [1066] none YPO0626 ATGACCCAGGATGAAATTATTAAGTCATGGATACC 69 37 TTAAATAACGATAAATTGTCTGCTCTGACGTTTCA 68 31 627 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0627 AAAAATGCACCTTCCGCTATTGGCC 70 48 TCAAACCCCAGCAATAACTTCTATTTCTACCAAG 69 38 381 none putative translational inhibitor protein Other 5.I Unknown [1066] none YPO0628 ATGAATAGACGTGTAATCAATCCCGAGACGAT 70 41 TCAGCCCAAGCAAGCAGTCGC 70 62 405 none putative translational inhibitor protein Other 5.I Unknown [1066] none YPO0629 ATGAGTTATATTCTTCAGGTTGATTTCC 60 32 TTAAATGGGCGCGCGATCG 69 58 303 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0630 ATGATGAAATGCGATCCCGTCAAGG 70 48 CTAGATCCGTTGCCGCAATCGAGA 70 54 717 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0631 ATGGATAAGTTTTCCGCGATGACCACTT 69 43 TTAAATACGTTCAGCCAGTTCCCAAGGTG 69 45 255 none LysR-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0632 GTGCTTGCTAACAAACTGGGTATTATCGATGAGTA 69 40 TCAAGTTAGCGTTACGTAATCGCCCTGC 70 50 204 none hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO0634 ATGACAAAAAAAACAGCACACAGC 63 38 CTAGCGGGCGAGGCCAACG 70 74 159 none hypothetical protein Other 5.I Unknown [1066] none YPO0635 ATGCATGACGTGTTCATGTACTTT 61 38 TTATGGATTTAGGGGAAAGATATGG 61 36 201 none hypothetical protein Other 5.I Unknown [1066] none YPO0636 ATGCCAACGTGGAGAAAGG 61 53 TCACACTGGGATCGCGCCT 68 63 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0639 ATGAGCTTCAACCTGCCCGGAA 69 55 CTATGGATAAATTATGCCTTGAGGCTTTGGC 69 42 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0640 ATGACCGACATTGAAAAAGCAGTGACTACT 67 40 TTAAAAGGCATCACCTATATTGATTCTCTGTAACT 65 31 471 none hypothetical protein Other 5.I Unknown [1066] none YPO0641 ATGGCAAATTTAGAAAAAGCGGTTAATGAGTTTAC 68 31 TTAACCGTTTTCCAACATTTTAATTTGTGTCTCAA 69 29 456 none hypothetical protein Other 5.I Unknown [1066] none YPO0641a ATGACGCTTACAGAAGAACAGAAGGCGC 70 50 TCATGAATTGTCGTGCGCCCC 70 57 291 none hypothetical protein Other 5.I Unknown [1066] none YPO0642 ATGGGGCGCACGACAATTCA 69 55 TCAGCCCATCATTTTACGGTAGGCTTC 69 48 339 none hypothetical protein Other 5.I Unknown [1066] none YPO0643 GTCACCCGAGGTAAGGAGCAAGGCTATCTGA 74 55 GTAATGCCTTCGCCTCGATCTGACGAATACG 74 52 255 rpoD alt RNA polymerase sigma factor RpoD Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO0644 AATGACTTGCTAGCTCGCACTGACATCATCGAT 74 45 GTTTAATCCATGTGTACGGTCCCGCGCTATTA 73 47 255 dnaG dnaP parB DNA primase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0645 ATGCCGGTAATTAAAGTACGTGAA 61 38 TTAATACAGACGAGTGCGGCG 63 52 216 rpsU 30S ribosomal protein S21 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO0646 ATGCGAGTATTGGGTATAGAAACGTCCTGC 69 47 TCAGACTTTTGGTAACTCAGATAACGGCCAC 70 45 255 gcp putative glycoprotease Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO0647 ATGAGTGCTATCGCGCTTGGCA 69 55 CTAATCTTCTTTCTCTTCTAACTCTGCGGCTTCTT 68 40 651 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0648 ATGGACATCGTATTTATTGAGGAACTCAGTGTCA 70 38 TCAGCTTAGCCGTTGGCCACGT 70 59 360 folB putative dihydroneopterin aldolase Central intermediary metabolism 1.C Central intermediary metabolism [63] Folate biosynthesis none EC:4.1.2.25 YPO0649 ATGACGGATATGTATTCGCTGTTTGTGGC 70 45 TTACATAAAGACCCAATACACCACCGCC 68 46 819 bacA putative bacitracin resistance protein Cell processes 4.H Cell killing [2] Peptidoglycan biosynthesis none EC:2.7.1.66 YPO0650 ATGAACATCTACCTGGTCGGCGGAG 70 56 TTATATTGAAGCTGTTTCCTGAGTCTGTTTCCACT 69 37 255 cca tRNA nucleotidyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] none YPO0651 ATGCAGAAATTACGCCTAATTTGCCTCAC 69 41 TCAGCAGTTCATCCAGCGGTTGTTC 70 52 624 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0652 TGTGAATGAAATTATGACCGTTGA 62 32 GAACAGCACCGTTTAACCAAAAG 62 42 1347 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0653 CGGCATTGTTAACGGCATTACGGTT 69 48 ATACAAAATGCCCGATGATGTGCGA 69 44 255 glnE glutamate-ammonia-ligase adenylyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO0654 AAAGTCACGCTGCCTGATTTTCGC 69 50 TTAGCCGCGGCCGTTTTTGA 69 55 255 rfaE waaE ADP-heptose synthase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO0655 GTGGGTGGGTTAAAGCAAGAGTTAAGTCTGG 70 48 TTAAGGCTGAGTTAGCTGCGTCTTTGGC 70 50 255 asoB yjeH putative permease Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0656 AAAAATTGAGCAAATCGCCCGCC 70 48 TTATTCCCCGGTCTTTTCGCCGT 70 52 282 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0657 GTGAAAGTCCCCACCGGCG 68 68 TCATGTAAGCACCTTAGGATCTTCG 63 44 252 none hypothetical protein Other 5.I Unknown [1066] none YPO0658 ATGAATCAGACGCTTCTCTCAGATTTTGGC 70 43 TTAGCTGGCTTTCTTCGCGCGA 70 55 654 ribB htrP 3;4-dihydroxy-2-butanone 4-phosphate synthase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.9 Riboflavin [6] none YPO0659 ATGAACACCTTTCGTATGCCTGCACTG 69 48 TTAGCCGATTTGCACCGACAACATACTTAA 69 40 783 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0660 ATGAAACGTTTAGCGATTAGCGAACGC 69 44 TTATCCCAAAATAATATGTGGATAAAACCGCGA 70 33 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0661 ATGATGAAACGGACTAAAAACATCAATCAAGAGAC 69 34 TTAGCCACCCATGCTACGTGTGGTG 70 56 687 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0662 ATGTTTGAAATTAAAGCACAGGGG 62 38 TTATTTTTTGCCTCCCTCGATT 61 36 171 none hypothetical protein Other 5.I Unknown [1066] none YPO0663 ATGAAGAAACTGCTCCCCCTTCTTATCGG 71 48 TTACTGAGCGCGTGGTGTAGTGACAGTTT 70 48 255 hasF tolC mtcB mukA refI ABC-transporter outer membrane component Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0664 TGGTTATTAGAAATGGTCGCCGGGA 69 48 CTATCGCTGCCATTCAGCTCTTAGCG 69 54 366 none putative MutT-family protein Other 5.I Unknown [1066] Purine metabolism none EC:3.6.1.13 YPO0665 AACGCTACACGCCTGATTTTCCGG 70 54 CTAACAAACCGGAACGGCCACC 68 59 426 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0666 TTGGAAAGCCTGTTTAAACTGCCTATGGC 70 45 TCAATAACCATCCGAGTCCATATCAGGG 69 46 828 icc Icc protein homologue Other 5.I Unknown [1066] none YPO0667 TTTTATATATTCATGGTTTTAATAGCTCTCCCAGC 66 31 TCAGGTGTTCGCCAGCCCTAAAAA 69 50 582 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0668 CATTGAAGTACTCAGCGGTCTAGAACCAGTGCG 74 52 GATCTTCCGAGCGTTTCTTTGCCAACAACATATC 74 44 255 parE nfxD topoisomerase IV subunit B Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0669 ATGAAAGTCACGTTGGAAGAGTTGCAGG 69 46 TTATATTCTTAGCCAGTGACTCCCCTGTAACTTAA 66 37 255 crgA LysR-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0670 AACGTACTAATTATTAATGCAATGAAAGAGTTTGC 65 29 TTAGCTGTTAACGTTTTCGGCTAAGTGCTGA 70 42 585 mdaB mda66 putative modulator of drug activity Other 5.I Unknown [1066] none YPO0671 CGATGGTTTAAAGCCGGTACAGCGT 69 52 TGAAGGGTAATCGAGGTTTGCGGAG 69 52 255 parC DNA topoisomerase IV subunit A Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0672 ATGCTATTAATTTTGCGCACGGTTCTGG 70 43 TTTTTAGCAACGGACTGTTGAGCCACTTC 70 45 732 plsC parF putative acyltransferase Other 5.I Unknown [1066] Glycerolipid metabolism none EC:2.3.1.51 YPO0673 ATGTCACTCAGTCGTCGCCAGTTCATT 69 48 CTGCCACCGTCACTAACTGCCCCG 74 67 255 sufI putative cell division protein Cell processes 4.C Cell division [24] none YPO0674 GTGGGCGGTTATTTGAAAATCGCAC 69 48 TTAATGCTGCCTGTTTTTCCCTCTGGA 70 44 813 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO0676 ATGACAATGCAACCCCTTATCAAGTTGTACG 70 42 TCAGCGGTCAGATCCGAAAACTTCC 70 52 834 none putative aldo/keto reductase family protein Other 5.I Unknown [1066] none YPO0677 ATGCAGACAATATTATTATGGGCAG 60 36 TTACCGCATGTCATGCTGC 62 53 210 none hypothetical protein Other 5.I Unknown [1066] none YPO0678 ATGCAAAATTTTACCCTTCATACCCCCACTAA 69 37 TTATACCGCCGCTTCATAGATACGCTTG 69 46 255 none putative iron-containing alcohol dehydrogenase Other 5.I Unknown [1066] "Fructose and mannose metabolism. Galactose metabolism. Ascorbate and aldarate metabolism. Bile acid biosynthesis. Glycine, serine and threonine metabolism. Lysine degradation. Phenylalanine metabolism. Nucleotide sugars metabolism. Glycerolipid metabolism. Tetrachloroethene degradation. Benzoate degradation. Butanoate metabolism. Vitamin B6 metabolism" none EC:1.1.1.- YPO0679 ATGGTTGATGTGATTGATATTCAAGCACAAATG 70 33 TCAATTAATACGCTGTTTGGCAACACCTTC 69 40 894 none AraC-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0680 ATGGATGTATTACGTGAAATCCTTCATGCCC 70 42 CTATTCGGTCGTGCTCTTACGTTTGCAC 70 50 663 none putative DedA-family membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0681 ATGGCAGTGAATAAAGCAATCCCAGAAAAA 70 37 CTATTTTACGGCTTGAATTCGCTCAAATCCT 69 39 255 metC putative cystathionine beta-lyase Amino acid biosynthesis 1.D.2 Aspartate family [24] Methionine metabolism. Cysteine metabolism. Selenoamino acid metabolism. Nitrogen metabolism. Sulfur metabolism none EC:4.4.1.8 YPO0682 ATGCATATTGGGTGGAGGCGCA 70 55 TCACCCTGCTCGTAATTGATGAGGATG 69 48 255 none MotA/TolQ/ExbB proton channel family protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0683 ATGGCAATGCGAATGAATGATTCCC 70 44 TTATTTTGCGCCGCTGGACCC 70 57 432 none ExbD/TolR-family transport protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0684 ATGGCGTTAATCCCTGTTTTTATTGGGTTG 70 40 TCAGCTTTTAGGGATATTTCTCCCCACTTCAT 70 41 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0685 TTGTTCAGGAAAAATAATACGTTAATCAATAATCA 65 23 TTAGCGCCCGATTGTGATGGC 69 57 573 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0686 ATGAGAGATACAATATTACGTTTATTGCC 60 31 TTATTTTTCCTGAACAAAAATCACCT 60 27 471 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0687 ACTATTATTATCATCCCAGTGATGATTTTTCTGTT 65 29 TCATTTTTCCCTAATGAAGGATTGTTCCTGAG 69 37 771 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0688 ATGAGAATTATTTTCTTCACGTTATTAATACTATT 60 20 TTAAATATTTTTAACATAGTTAAGTAGCTCCAGA 60 24 834 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0689 ATGATTTATTACGTCGTCGCGT 61 41 TCATAGGGATTTACCTAGCATTTTTC 60 35 876 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0690 ATGATTGTCCCTTTAAAAATACAAGAGTTAATGCG 68 31 CACCGTAGAGAAAACACTGTTTAACTCATTGGCCA 73 43 255 none putative type II secretion protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0691 ATGGGTGTGCTGTTTATAAAAATAGACATTACGCC 70 37 TTTAAATAACTTATTGAGTTTTTCCCTAATCCACA 65 26 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0692 TTTTTGTTTGAAAATTCAGCTAACGCCAAGC 70 35 TTAACTTAATGCCAAACTCTTTAATTCGACACTAA 66 29 855 none putative membrane protein (pseudogene) Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0694 ATGAATCGAAAATTTCTTATATTATTTTCACT 60 19 TCATCCTCTTAGCTCTCTTATTGTCTG 61 41 867 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0695 ATGGATGTAATTAGATTATCGTTAATAGTATTAAT 58 20 TTAAATTAGTACAGATGATAGAAATCCGG 60 31 423 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0698 TTTTATGCCCGTGATGATGAACCGA 69 44 GCGATAACCAATAGCCCCTTCGGTC 70 56 255 none outer membrane usher protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO0699 ATGAAGAAGCTCTCATTAATCGCGTTGACC 70 43 TTAAATCGCTTTAGCTGCCCGGCA 70 50 720 none fimbrial chaperone protein Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO0700 AAAAATATATTCCTCACGTTACGCAGTGAGAGGT 69 38 TTAAGGGTAGGCGACGGTAAAGATTGCAT 70 45 255 none Fimbrial protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO0701 TTCCTTTATATGACCTATATTGAGCGTAAAATACG 65 31 TTACGGTGCTCTGTATGGGTGTTGTCCT 70 50 807 none periplasmic binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0702 ATGATGCTTATCTCAACATCTTCTTTGGCTATTAA 67 31 TCAGTTATCTATAAAACTTTGTTGCCATTCAACAA 67 29 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0703 ATGAAAATAAAACGTGCTGCTGG 62 39 TCAGCTCTTGCAAATCGCC 63 53 570 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0704 ATTATATGATATTTCTCGTCTGTTAAAAGAGACGC 65 31 CCCCCGCGATCCTGACACC 70 74 255 none flagellar assembly protein (pseudogene) Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO0706 ATGTCGAACAGCAGTGGTGAGAAGAGTG 69 50 TTATGTTTCATCATGGAATCGTTGCATCTCTT 70 34 255 flhB putative flagellar assembly protein Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO0707 ATGCCGATGGGAATCGATATTCATGC 71 46 TCAGTGCACCTTCATCCGTTCAAACTG 70 48 780 fliR mopE putative flagellar assembly protein Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO0708 ATGATGACCACGGATATTGCCGGT 69 50 TTACCCAACCAACTGTGCGGCTTG 70 54 273 fliQ putative flagellar assembly protein Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO0709 TTCGAGCGATAACACCGGTGACC 69 57 CTATAGCCCCTGAACGCTGGCAGTG 70 60 771 fliP putative flagellar assembly protein Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO0710 ATGACTGACCAGCAAATTGAACTCAACAATG 70 39 ATAATACGCAGGCCGTATTTTTCATTAATCACC 69 36 414 fliN mopA flagellar switch protein Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO0711 ATGCAATCAAATAAAGTCAAAGCAAAAGTCTATAA 66 26 TCAGTCATGGTTCATCTCGTTGGGTTG 70 48 900 fliM putative flagellar motor switch protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0712 ATGATGAATATCAATGTTGATGTTTTTCCAAAAA 67 24 TTATGAGTGACACTCAATGTCGATGCCATC 70 43 255 fleR flbD sigma-54 transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0713 ATGGATAACATTGATTCTATCAATATGCCTCGCT 69 35 CTACAGCGCAGTATTCATAACATCATCTAATGCAG 69 40 381 fliE putative flagellar hook-basal body complexprotein Cell processes 4.D Chemotaxis and mobility [86] none YPO0714 ATTAGGTGAAAATACAAAAACCATTCTTATGAGCG 68 31 AATCCATTGTTTAATGACTTCGGCGGTACGTTCAG 74 43 255 fliF putative flagellar M-ring protein Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO0715 ATGAACGAATCAAATCTCAACCTGAATGATGA 70 34 TTACTCCATGGTCTGTTCGGCAAACAA 70 44 255 fliG fla puative flagellar motor switch protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0716 AAAAATACCCCACGGGCGGG 68 60 TCACTCATGGTGAGGTTCCGTCAAAA 69 46 717 fliH putative flagellar assembly protein Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO0717 ATGAGTGAATCTCCGGCTCTCGATCAT 69 48 TTACGCCTCGTCAGTGGGGGC 70 67 255 fliI fla flaC putative flagellum-specific ATP synthase Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none EC:3.6.3.14 YPO0718 ATGAGCGATATGATCGACACACTCCAAC 69 46 TTAAATATCGCCCGCCTGCTGACG 71 54 384 none hypothetical protein Other 5.I Unknown [1066] none YPO0719 ATGGAGCCGACACAACGTGTTAAACAA 69 44 TTAGCCCGCGTAAAGAAACTCAGTAGGCT 69 48 426 none hypothetical protein Other 5.I Unknown [1066] none YPO0720 ATGGAAATTAACACGCATCGG 62 43 TTATCTCCCGTGGAAGTTGAGTA 60 43 267 none putative flagellar regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0721 ATGGATGCCCACAAAATACGTCCTGTT 69 44 CTAGGGCGTGGACAGCCCTAGCAT 70 62 255 flgA putative flagella basal body P-ring formationprotein Cell processes 4.D Chemotaxis and mobility [86] none YPO0722 ATGGCGATGCAGCTTCGACTTACC 69 54 TTATTTCCCTTCAATTGCCTGCTTTAGTCC 69 40 408 flgB lfgB putative flagellar basal-body rod protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0723 ATGTCTTTTAACCAAATCTATCGGGTGGCTG 70 42 TTAGCGCTCTCCAAGCTTTAACACACTCTG 69 47 426 flgC lfgC putative flagellar basal-body rod protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0724 ATGCAGATTAATGAAAGCAGAAATTCAGCCA 70 35 CTAGGCCCCGAATTGTGTGATTTGG 70 52 657 flgD lfgD putative basal-body rod modification protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0725 ATGAGTTTTAGTATCGCTAATACCGCGTTGAATG 69 38 TTACAGCACCTGGAACAGTGCATTCATC 69 46 255 flgE lfgE putative flagellar hook protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0727 ATGGGCGGTGGTTATAGCAGCCG 71 61 TTAACTGCCCCGGATCATCCGGTT 71 54 594 flgF putative flagellar basal-body rod protein(pseudogene) Cell processes 4.D Chemotaxis and mobility [86] none YPO0728 ATGAACTCTGCTTTATGGGTCAGTAAA 62 37 TCACAGCTTCTGGCTAACAAATTT 61 38 flgG putative flagellar basal-body rod protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0729 ATGAAAAGGTTTTTAATACTGACGCCAATGGTG 70 36 CTAAATTGGGAATAGCGGATGGTTGAAGAAG 69 42 666 flgH putative flagellar L-ring protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0730 ATGTTTTTAAACCGGATACATTTTTCGGCC 69 37 TTAAATAACCACTAATTCTGCGTCCAAGGCAC 70 41 255 flgI putative flagellar P-ring protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0731 ATGATTGAAGCCATTAATAAATCATCCCCG 69 37 TTATTTACTGCCCAACTGCTGGATCAACAA 70 40 294 flgJ putative flagellar protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0732 ATGAATTTTATTAGAACCGCCTTTAGCGGGAT 70 37 AGACTAAAGCTAACAGATCAGAAAATAGCTTATCG 65 34 255 flgK putative flagellar hook-associated protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0733 ATGAGAGTCAGCACTCCAACCATGTCATC 70 48 GTTAAAAAGTGACAAGCTATTAATCTGTTTGAACG 66 31 255 flgL putative flagellar hook-associated protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0734 ATGCAGGTAGGACTCAATAGACCGCAATG 70 48 CCCCCAATAAATTTCTCACCATAGCGC 70 48 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0735 ATGAAATGGTTAACTGCTAGCAATGGAATACTACT 66 34 TTATTTCTCGCCCAAGACAATACCGCTTT 70 41 447 none hypothetical protein Other 5.I Unknown [1066] none YPO0736 AAAAATATGAATAAACAATCCCATATCGTGAATGG 68 29 CTAGCAGTTAACCATTTCATTTATTTTTCTCTCCA 67 31 255 none putative regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0737 ATGTCACTGTCTATCCACACCAATGCTTCTG 70 45 TTATTGGAAGAGGATTGCAGGCGGTT 70 46 255 flaA1 putative flagellin Cell processes 4.D Chemotaxis and mobility [86] YPO0738YPO0739 YPO0738 ATGTCACTGTCTATCCACACGAATGCTTCTG 70 45 TTTGTTGCCTTATCCAAAACATCAGCCTC 70 41 639 flaA2 putative flagellin Cell processes 4.D Chemotaxis and mobility [86] YPO0739 YPO0739 ATGGTGGCTTGGCTGAATCGGTC 70 57 TTAACCTTGCAGCAGGGTCGAAATCA 70 46 255 flaA3 putative flagellin Cell processes 4.D Chemotaxis and mobility [86] YPO0738 YPO0740 ATGATAACCGTTGAACCAGAAAAGCAGGC 70 45 TTTCTGCTCTTTTTCTGGTTTAAATAATTCTAAGG 66 29 255 fliD putative flagellar hook-associated protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0741 ATGGCAGGATTATATCAACAAACAGATATCGCT 69 36 TTAATGTTTCATCCCTTCCCAACCTTGATATAAGG 70 37 363 fliS lafC putative flagellar protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0742 ATGACTATTTTGGCTACCGCTGAGGCG 71 52 TTAGCGGCCCTCTTCCTGTGCC 70 64 327 none hypothetical protein Other 5.I Unknown [1066] none YPO0743 ATGCCGCTATGGCGATCCG 68 63 TTATATCGTTATTAGGAGCGTCCCATCATCG 69 42 255 none putative flagellar hook-length control protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0744 ATGAAGACTAAGAAGAAAGTATTTTCGCCGAA 67 34 TTATTGAAAGACCATTCTGCTGATAACCACGTC 70 39 471 none putative flagellar biogenesis protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0745 ATGGAAAATAGAGAGTTTGAAGCGTGCTTAACG 70 39 TTTTTGTACTAATTTCTTATTAAGTTGGCAGATGC 65 29 696 fliA lafS putative RNA polymerase sigma factor forflagellar operon Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO0746 ATGCAGAAGCTGTTTGGCCTACTGGTC 70 52 TTAGACGCCTGCCGTTATCAGCTTATTGAT 70 43 867 motA putative flagellar motor transmembrane channelprotein Cell processes 4.D Chemotaxis and mobility [86] none YPO0747 ATGAGAAATCATGCCAGTGGCGG 69 52 CTATTTTTCAGCTTTCTCAGCCGCAGGT 69 46 255 motB lafU putative chemotaxis membrane protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0748 TTGAAGTATGACGAGCATATGTTGG 62 40 TCAGTAAGGCAGCCAGCGA 63 58 189 none hypothetical protein Other 5.I Unknown [1066] none YPO0749 TTTTTATTGTTGAGCGGCTTTATCCTCGAG 69 40 TCATGTTCTCGCGCCGCTGT 69 60 597 none hypothetical protein Other 5.I Unknown [1066] none YPO0750 ATGATGCTTACCACGCCAA 60 47 TTATTGATTATTTTCATTTGATTTTTTCTTT 60 13 456 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0751 GTGAGCATTGTCTTATTTCAGACAATG 62 37 TCACACTTCGGGTTCACCA 61 53 282 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0752 ATGGTTAAACCATTTATTCTTGCTGCTATCGC 69 37 CCCCCTGAATCGTCACAGGGC 70 67 180 pcpY pcp slyB putative lipoprotein (pseudogene) Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0754 ATGAAAAAAACAATAGTACATTGTTATTATATTTT 59 14 TTAACAGAAACTCAATCGTATAAAAAATCG 62 27 303 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0757 ATGAGAATAATTATGAGCAAATGGTCTGAAGAAAA 67 29 AAAGCGTGACATTGTAGAATATATCCATTATTACA 65 29 255 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO0758 ATGAGCCACATTGCGGCCAAA 69 52 CTATTTCTCTGGTCTTATTGAAGACTGTCGGATAA 67 37 255 none LacI-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0759 ATGGCTGACGCACCTTTATCGACTG 69 52 TTAATACCAGAGATACCAGGCTAACAGCGAGACA 70 44 255 none Sodium:sulfate symporter-family protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO0760 ATGCCGTTTTTCTACCTGCAAATACGC 69 44 TCAGATTTTGAGGTCAGCAGCGGTC 69 52 414 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0761 ATGATTCGTGATAGTAAAAACTGGGC 63 38 TCACAATTCACTTTTTACGCTTGC 63 38 243 none hypothetical protein Other 5.I Unknown [1066] none YPO0762 AAACAGCGGCTAACAGGCTGTACGC 70 56 AACATCACCGAAATCACGATCACGC 70 48 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0763 ATGGAAACCCCAGGGGTAA 61 53 TTAGCCTGCGGCTAACGTT 61 53 1320 none hypothetical protein Other 5.I Unknown [1066] none YPO0764 GTTTACCGCCTCAGACATTTGCCGT 69 52 CGCAGAGGTGATATTAACCCCGGTG 70 56 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0765 ATGGACTTTGACAATAATCAATGGGCGTG 70 41 TCAATCCTTACTGGCATTTGAAATATTAAAGTGGC 70 34 411 none putative adhesin (pseudogene) Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO0767 ATGGTGGACTCTGGCGCTGCTC 70 64 CTAGACAAACATGCTGATCAGCAGTACCACC 70 48 255 gntP putative gluconate transporter Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0768 ATGTTCAGTTGCATAATAAAGACAACA 60 30 TCATACAGTGGGATTAATGGTATTTTT 60 30 399 none hypothetical protein Other 5.I Unknown [1066] none YPO0769 AAAAATTGGCCCTGGCGTTGATGT 70 46 TTAGTTGTAATCCACCGTTAACTGGAAGCCC 70 45 876 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0770 ACGTTAACCGGAGGCCGCTTAAAGGG 73 58 CCAGGCTTGTGCTTGCTGTTGTAATGACCATAATT 74 43 255 none ABC-transporter transmembrane protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0771 GTGGGGCCTTCTGGTGCGG 70 74 TCAGAAAGTGCGTGGTTGAATGCG 70 50 444 none ABC-transporter transmembrane protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO0772 ATGAAATATAACGCAAATATTACCAGTTTATTTGG 65 26 TCTCCACAGTGTGGCGATCCTTTTG 70 52 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0773 ATGATTGAACGCCTTTTTCGATTGATAAAACC 70 34 TTATATTTCATCGTGATACTCCTTGCATTCCTTG 69 35 765 none putative thioesterase Other 5.I Unknown [1066] none YPO0774 AAAAATCGTGGTCTGCGGCACTTTATTT 69 39 TCAGGAGCGGCTGGGTCTAACTGAT 70 56 672 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0775 ATGAGACAGCCAAAAACTATTTTGGTGGTTG 69 39 TCATAATGCCCCCTCCTGAAAATTCACT 69 43 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0776 CGCACAAGCTACACAAATCGCACAA 70 48 ATGGCACTGATCACCCACCTTCTGA 70 52 255 none putative siderophore biosysnthesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO0777 TGCGGCTTATGTACCTATCAGTGT 62 46 ATGAGATTGAATCGACACCACATT 62 38 ~1400 none putative siderophore biosysnthesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO0778 GCGTTATCTGATGAGGATGATTTG 62 42 AACAGGGCTTTCTGATACTCCATC 62 46 1394 none putative siderophore biosysnthesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO0781 TTGCTTAGAAAGCAAAAAGTTTTTATAAA 60 21 CATTATTGCAATATCGCGGTAAG 61 39 351 none putative surface structure protein (pseudo) Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO0782 TTGCGTCTTTTATCTCTTTACCTCTT 60 35 CTATAGATTTTCATGCCGTGAGTTTAC 61 37 219 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0783 AAAAAGTGCTGGAAGAAGGCACACCTAAAG 69 43 TTAAATCGCGATAGGGGCTTTAATACCAGG 69 43 795 thyA thymidylate synthase Purines; Pyrimidines; nucleosides; nucleotides 1.F.3 2'-deoxyribonucleotide biosynthesis [8] Pyrimidine metabolism. One carbon pool by folate. Folate biosynthesis none EC:2.1.1.45 YPO0784 ATGAGCAATAGCTATCTGGCGTTTCCTAAATTTG 70 38 TCACGAAAGTTTTTGCGTAGGACGG 68 48 873 lgt umpA prolipoprotein diacylglyceryl transferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.11 Phospholipids [9] Lipopolysaccharide biosynthesis. Sphingoglycolipid metabolism. Blood group glycolipid biosynthesis - neolact series. Globoside metabolism none EC:2.4.99.- YPO0785 AAAAGCCCCGTGGGCGTACTATCAC 70 56 GGTGGTCATCTGCGCGGTTAATACC 70 56 255 ptsP phosphoenolpyruvate-protein phosphotransferase Degradation 1.A.1 Carbon compounds [66] none YPO0786 GTGATCGATGATGATGGCTACCGC 68 54 TTAACCTCTTTTACGGCGATAAGCGGG 69 48 528 none conserved hypothetical protein Other 5.I Unknown [1066] Starch and sucrose metabolism. Folate biosynthesis none EC:3.6.1.- YPO0787 TTGAAATTAATGATTTTTTTTATTTTTTATTTTT 60 6 TCAAAGATGCTCTGATTGTTTCAC 61 38 252 none hypothetical protein Other 5.I Unknown [1066] none YPO0788 ATGAACACTGGTTCAATTTACAGCC 63 40 TCAACAAAATAACAGGTTTCCCA 61 35 192 none hypothetical protein Other 5.I Unknown [1066] none YPO0789 ATGTCTGTTTACTCTTTGCCTCCTGCTCC 69 48 CTACAGCAAAAAGTGGCGAGCCAGC 70 56 687 mutH mutR prv DNA mismatch repair protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0790 ATGCAATATCATCGTATCCCCCACAGTTC 69 45 TTAAGGTGCGGGGAAGGTATAGCGG 70 56 255 tas putative aldo/keto reductase-family protein Other 5.I Unknown [1066] none YPO0791 TTGCTTGTGAAATTTAAAAACCG 60 30 TTACTGCCATGAAAAAGATGCG 62 41 426 none hypothetical protein Other 5.I Unknown [1066] none YPO0792 ATGAGTCAGGACGTATTAGCAGATAAGCCTTTGTT 69 40 TCATTCAGGCTGACGCGTTTTCTG 69 50 255 ygeD putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0793 CGTGGGTTATTCCGTGTCACCATTG 69 52 CCCGTGCCACTTTGATTAACCGTTC 70 52 255 aas Aas bifunctional protein 1.H Fatty acid biosynthesis [33] Fatty acid metabolism none EC:6.2.1.20 YPO0794 CGCTGGATTTAGTGGCCGAAGAGAA 70 52 ATAAAGCGCCACCTCGACCAAACAG 69 52 255 bisC putative biotin sulfoxide reductas2 Biosynthesis of cofactors; prosthetic groups and carriers 1.G.1 Biotin [8] none YPO0795 ATGGCCACTATAAAGGATGTTGC 61 43 TTAATCAGTGTCATCCCGTAGGC 62 48 1023 galR galactose operon repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO0796 ATGCCACGCGCACTGAATGAC 68 57 TTAAACGCGTTCCAGGTCAATCAATTCTT 69 38 255 lysA diaminopimelate decarboxylase Amino acid biosynthesis 1.D.2 Aspartate family [24] Lysine biosynthesis none EC:4.1.1.20 YPO0797 ATGCCTGCAATTTCCTTACGACAAATCG 70 43 TTAGCACGCAGGGGCAATGACTG 70 57 255 lysR transcriptional activator protein LysR Broad regulatory functions 2 Broad regulatory functions [235] none YPO0798 ATGCCTGTTGCACTACTGGCGTTG 69 54 CTAAGCCATTTTATTCCCAATAGTACGCGC 69 43 255 none putative sugar transport protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0799 ATGGATAGAATCACTGCAGCAGAGGTTTTTG 70 42 TCACTTCATTGTCGATAACCACTGAGGATGT 69 42 909 none LysR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0800 ATGTTAAATAAAATGCTATTACAAATCACCTTCGC 66 29 TTACTGAGGCCATTTCATTTCGTTTTTCAATACTT 70 31 888 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0801 ATGCCCGGTACAACATTGCACTATATTTTCG 71 42 TCACGCGTTAGTTAACCTGTTGATCCAAC 69 45 636 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0802 ATGTTTTCACGCATGAATTATGTTGTTAAAAA 66 25 CAGCAATCGTGCTCTCCTTTGCTAATCGTAGAGG 74 50 255 cheD tse putative methyl-accepting chemotaxis protein Cell processes 4.D Chemotaxis and mobility [86] none YPO0803 ATGATTTATGCCTATATACATCCGATGAAAAATCT 66 29 TTATATATTGGCACGAACCAGTAATCGAGTAC 65 37 402 none hypothetical protein Other 5.I Unknown [1066] none YPO0804 ATGAATACGATAGTGATTAATGATGTTTTTT 61 23 TCATACCAATAATTGCCCCCC 63 48 717 none putative regulatory membrane protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0805 ATGCCAAATTCAAATATAAAATTAATGG 61 21 TCAAATCTGATTTGATATCTTGATATCTTG 61 27 306 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0806 ATGATGGATATACAGGTTTTTTTTGTG 61 30 TTAAGAAAATAAATTAGTCACATGACTCCC 61 30 843 none prepilin peptidase Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0807 ATGAGTTACGTCATGTTTTTACAGCA 61 35 TCATTTAAAGAATATAATTTTTCCTGCAA 61 21 462 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0808 GTGAGCAACATCATTGATGACGTGAAATTAAC 69 37 TCATGGTTGGCTGCTTAGTTTGATATTATATTTGT 67 31 255 none general secretion pathway protein L Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0809 ATGGTAATGGCATCATATAATTATTGGTTCGA 67 31 TCAATGATGTTGCTCACTAAAACTGTATCTCCG 69 39 897 none general secretion pathway protein K Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0810 ATGATTAAACGTCCAGATTGTGG 60 39 CTAATGTAGCAATAGAATAAATCGCCTAA 61 31 597 none general secretion pathway protein J Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0811 TTGTTAGAAGTAATAATTGCACTGACAATAT 60 26 TTAATCATTGGTTGTTTTATAGCCTTC 60 30 345 none general secretion pathway protein I Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0812 ATGTTCCATAGTCAGAGAGCGTTT 61 42 TTATTTATGAATAAATAGACTTACTCCTGTAATAT 57 20 543 none general secretion pathway protein H Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0813 ATGGCAAACAAAAAAACAAAAGG 61 30 CTATGTCTCACTGATAGATAAAGTAATCCAAT 60 31 438 none general secretion pathway protein G Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0814 ATGGCTGTATTTAAATATGTTGCCA 61 32 CATGACAAGGCTATTAATTTCAAGTATTG 61 31 1199 none general secretion pathway protein F (pseudogene) Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0815 ATGGCACAGGGCAGTCAGTTGATTTG 70 50 TTAAATACAGCCATTATCATCCTCTTGGCATATTC 68 34 255 none general secretion pathway protein E Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0816 ATTCGCAGTTATGAGAATTTGGAT 60 33 TAATCCACCAACAACAACTGTTTC 60 38 1404 none general secretion pathway protein D Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0817 TTGTTAAAGATAAGACTAAAAAATCCTTTTAGG 61 24 TTAGTTAATTATTAATGAATAATATTTACCATTAC 56 14 504 none general secretion pathway protein C Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO0818 ATGTATGTTGATACGGTTTCTGTTGT 60 35 TTAATAACCACTAAATCTCTCATTCATCTTAG 60 28 417 none hypothetical protein Other 5.I Unknown [1066] none YPO0819 ATGAGTAAGATAACGGATTGTTGTTCAGAAGAAAA 67 31 AAATTATACATACTTCCAACGATTTTAACTTTCCC 65 29 756 none putative carbonic anhydrase Other 5.I Unknown [1066] Nitrogen metabolism none EC:4.2.1.1 YPO0820 ATGCTCATCTTCCTGCAAAACC 63 45 CTATTCTGGATAACGCGCAATT 60 41 309 none hypothetical protein Other 5.I Unknown [1066] none YPO0821 ATGTGTTATTTTGTGATCCATCGTAA 61 31 TTATAGAAATACGCTACATTGCGGG 62 40 195 none hypothetical protein Other 5.I Unknown [1066] none YPO0822 ATGAAAGCGAAGTTGTTAATCACCTCTGGAAA 70 37 TTAGAATGTTGCCCTTACACCTACTCTCATGTATT 67 37 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0823 CACTTGCCGTAGTATGCCCACCAGA 69 56 TTGCTTCAAAAATATTATTGCCGACGC 68 37 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0824 GATATGGACAGCATCCGTTTTCGGG 70 52 GGGTCACGGGATTTATCATTGGCAG 70 52 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0829 ATGTCGCTAACAAGACGCAATTTATTAAAAGGAA 69 32 CGCATTGGCCGCCACTTCTGTTG 74 61 255 none putative sulfatase Central intermediary metabolism 1.C.5 Sulphur metabolism [13] none YPO0831 GTGAAATCGCTGATTGGTCAGGCG 70 54 TTATTTCTCTTTTTCAGCTATGATCACTTCAATTC 66 29 543 none DeoR-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0832 GCATCCTTTAGAAAAACTGGTTCAGCGCCATAAA 73 41 GATGTGTTCCCGTTAAAAAGGTGGCATG 71 46 255 agaZ putative tagatose 6-phosphate kinase Degradation 1.A.1 Carbon compounds [66] Galactose metabolism none EC:2.7.1.144 YPO0833 ATGACGCAATATTTAGGGTACAGCCGGGAA 72 47 TTTTTAAATGGATAAATAGTCACACCTTGCACCAC 69 34 255 none putative phosphosugar isomerase Degradation 1.A.1 Carbon compounds [66] none YPO0834 ATGACTCGGCCAAATATCGTCTGGACT 69 48 TTATGCCCTGGCGGCCAGC 70 68 498 manX putative PTS transport protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0835 ATGCTTTTTGAAGCTACGTTAGTCGGAATCTG 69 41 TCAGATGCCATCTTCGAAATCCTCTGG 70 48 789 none putative PTS permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0836 ATGGCATCTGATATCACCGTAGATAAAGACCAC 69 42 TTAGACAATGCCCAGCAGATGACCG 70 52 891 none putative PTS permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0837 ATGATTGGGATTGTTGTTTCTGGCCA 69 42 TTAGAGCCCATCCTCGTTTTCGCC 70 54 441 none putative PTS permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0838 ATGCGTACTGCCTATCTCGCTGATCG 70 54 TTAGGCTGAGTGGCGATAAGCCCATT 70 50 255 none putative acetylglucosamine-6-phosphatedeacetylase Degradation 1.A.1 Carbon compounds [66] Aminosugars metabolism none EC:3.5.1.25 YPO0839 ATGCAACCATTTGATTTGAATGGAAAAGTAGC 70 34 TTAACGCGCCAGCCAGCCG 71 68 756 kduD2 2-deoxy-D-gluconate 3-dehydrogenase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions none EC:1.1.1.125 YPO0840 ATGAGCAATATGACACAGCAGACGCG 70 50 TTAGGCCAGACGTAACATTTCCGACG 69 50 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0841 ATGGCACAGCCACATACTCAACAAGC 69 50 TTATTTAGGCTGTGTCAGTTGCGGCATAA 69 41 255 none putative regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0842 AGAAAAACCCAATGTATTGCTGGT 62 36 TATTGGTGCCGTCATCATAGAAGT 62 42 ~1400 none putative sulfatase Central intermediary metabolism 1.C.5 Sulphur metabolism [13] none YPO0843 ATGAGTGTTGATATTAGCGCCAAACCCC 69 46 GAGCTGTAGCTGGTTACGCCTTTGCGGAGTAA 74 53 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0844 ATGTTTTTGGTTTCTTCCCGAGAAATGTTACG 70 37 TTACCGTTTGCCAGCGCTGC 68 60 855 agaY kba putative aldolase Degradation 1.A.1 Carbon compounds [66] "Lysine degradation. Tyrosine metabolism. Phenylalanine metabolism. Sphingoglycolipid metabolism. Nitorobenzene degradation. 1,4-Dichlorobenzene degradation. Fluorene degradation. Carbazole degradation. Styrene degradation" none EC:4.1.2.- YPO0845 ATGACGAAACACGTTGCCGTATTGCT 70 46 TTACGTCTGTGCTGACCCATGTTTAAAATAGA 68 37 579 none ThiJ/PfpI-family thiamine biogenesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.8 Thiamine [11] none YPO0846 ATGAGTATGGACGGCTTTAACTTGGCG 69 48 TTATAAATCATAGATCTGATCCGTCGGCTTATTTG 68 34 249 none LacI-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0847 ATTGATATTAATCAATCAGCTAAAATTGTAGGACG 65 29 GGTTTATTACGGCGCTCAGCGAACAGAGC 74 55 255 none putative sugar transporter Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0848 AGTCTGGAAGGCTTCTCTCTCCCCG 70 60 TTTAGCCATAGCGCATGGCCTTGTT 70 48 255 none putative glucosidase Degradation 1.A.1 Carbon compounds [66] none YPO0849 ATGAAGTCGAAAAGCACCACATTAGAAGATGTT 69 36 CCGGTCATTAATCGAATGTTGAATGCTTT 69 38 348 lacI lactose operon repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO0850 ATGAAAACCAGTTTACGCACACTGTCCG 70 46 TTACCACCAGGCTTCCACTTGGACACC 72 56 255 lamB malB maltoporin Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0851 ATGATCAGCCTGAAATCTTTTATGCACTATTTTTC 68 31 TTAGGATTGAGAGAAATGCTCATCAAGTATTTTAC 66 31 312 none PTS transport protein (partial) Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] Glycolysis / Gluconeogenesis none EC:2.7.1.69 YPO0852 AGCGCGAAAGTTTCTGCGTTATTGC 69 48 CAAGCGTCAGGCTACCTTGTACCGG 70 60 255 bgaB pbg puative beta-galactosidase Degradation 1.A.1 Carbon compounds [66] Galactose metabolism. Glycoprotein degradation. Glycosaminoglycan degradation. Glycerolipid metabolism. Sphingoglycolipid metabolism none EC:3.2.1.23 YPO0853 ATGAAATTCTTTAAACCGGCATT 60 30 TTAATTAAAAACTTTCATCGAAGGCA 61 27 1203 none putative galactosidase Degradation 1.A.1 Carbon compounds [66] none YPO0854 ATGGCTAAGTCACAAAGTATTAAACAAGA 61 31 TTATCCCTTAGTACTTCCTGACGTTAGG 62 43 none putative maltodextrin permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0855 GTGATTATCAGTTCTGGCGATAACGGAGC 69 48 TTATGCCATATCATCATTTTTAAATGATTTTGTT 65 21 255 none putative maltodextrin transport permease Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0856 ATGAAAATCAATAAAATCACTGCGCTTGTTTTAAC 68 29 TTACTGATTACTGGCCTGCATGGCCTCGATTT 74 47 255 none putative sugar-binding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0857 ATGTCCAGCATTAGACTGAGAAACGTGACC 69 47 TTATTCATGAGGCACCGGAATCTCTGC 70 48 255 none sugar transport ATP-binding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0858 ATGATCCGTAACGAGATACTGGCAAAAA 67 39 GCCTGTGTTGCCTCAGTGCCC 69 67 255 none sugar transport ATP-binding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0859 ATGTCTCTGACACGGACCAGTAAATTCAGG 69 47 TTATTGCTTACGGGATGGGTCAAGCA 69 46 255 none sugar transport system permease Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0860 AAAAACAATGCTACAAACTCTGCTTGCTGC 69 40 TTACTGACGCATCTTTAGCAGCTCGTCC 69 50 255 none sugar-binding periplasmic protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0862 ATGAAAAATAAAATATTCACAGCAATAGTG 60 23 TCATAATGCCAATTCATTAACATTGT 61 27 519 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0863 ATGCGAAGTATCGGGTGGCGTTTT 70 50 TTATTGGCTCAGCATACGGGGGC 69 57 858 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0864 ATGTTTGGTCATTCAAAACACGATCATCG 70 38 TCAGTTTTTCTCCTGTACAGTGGTATCAACTGC 69 42 681 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0865 ATGCCCGGCTATCGTTATCGAATCA 69 48 CTATTCTGCATGATCACTACGGTCACGC 69 50 321 none hypothetical protein Other 5.I Unknown [1066] none YPO0866 ATGCCAATAAGTGAAATTAATAGAAAAATT 60 20 TCACCGCATAGCGATCACC 63 58 306 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0867 ATGAAAAAGGTAAATTTACTGGTCTGGATAGGTTT 66 31 TTACAAGAAAATATGCTGTTTTTCACCGTTATTTT 67 26 780 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0868 ATGCTAACTTGCAACTTTTTATTTCC 60 31 TTAATATGTGTTAATTGTAATATGTATTAATTGTA 56 14 213 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0869 ATGGGCAGAACGGCTCAACTATTACTGG 70 50 TTATTTACCGTTAGCAGGTTCAGAGCGAAGA 69 42 768 none hypothetical protein Other 5.I Unknown [1066] none YPO0870 GATGAGAATAATGATAGCCCTTCG 60 42 GATTGCTGAATATGAGGGCTTAAC 60 42 1403 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0871 ATGAGCATAGTTATTTTAGAATTCGCTAA 60 28 CTATTTATTTAGAGCGTCCTGATTTAGTTT 60 30 285 none putative colicin immunity protein Other 5.B Colicin-related functions [10] none YPO0872 ATGGTAGCAAATGGTAACGTTGA 61 39 TTACTCATGTGAGTCAATTTCGTTG 60 36 258 none hypothetical protein Other 5.I Unknown [1066] none YPO0873 AAAAGGTTATTATCTGGTTGTGGGCGATGAAACAA 73 37 CCCATTTTGTCTGACGGCTTAAACATCGTTTTAGG 74 43 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0874 ATGCCTAAATTTAATCACTATGATTTAGCACTGTT 65 29 TCAAAAATCTGGAATAAACCCCTCTTTTCGC 70 39 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0875 ATGATAAACCCAGCGGAAAAG 60 43 TTAGAAGGGAAGTTCGTGATCATC 61 42 366 none hypothetical protein Other 5.I Unknown [1066] none YPO0876 ATGAATTGTTATGATTACGTCGGATT 61 31 CTAATTAATTATTACCATTCCTATATCATCAATTT 60 20 237 none hypothetical protein Other 5.I Unknown [1066] none YPO0877 GTGGAAGGCTGGGTTAAGGCGAA 69 57 CTAAGGATTATCGGCCCCGGGC 70 64 333 none hypothetical protein Other 5.I Unknown [1066] none YPO0878 ATGACCTATTCATCATTAATCCGATT 60 31 TCATTGCTTATTTCCCCGTG 61 45 201 none putative regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO0879 ATGAACTACACCATTGAATATTACGATGATGATG 67 32 TTATCCAAATCGCAACTCCTTCATTCGTTT 70 37 327 none hypothetical protein Other 5.I Unknown [1066] none YPO0880 AAGACCGCTTTCGTTTTGATGACCG 69 48 CGATAATGAACGCTGATGGCCGTAA 69 48 255 none putative primase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0881 ATGATGAAATGTCCAGTTTGTGGCGG 70 46 CTACCTAATTTCATTCAATAACTCCGGGTGTTT 67 36 399 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0882 ATGGAGAAACGGACTCCGC 63 58 TTAAATCTCCTTAAACGAGACATTCAA 61 30 297 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0883 ATGGCAAAACTACAATACATTCATGATGAAGCAG 70 35 TCACAAAATCATCTGCGCCGC 68 52 363 none putative DNA binding protein Broad regulatory functions 2 Broad regulatory functions [235] YPO4028 YPO0884 ATGGTCAAGGTTGACTGGTCG 62 52 CTAATAGGTTGCCGTGGTTCTACG 63 50 261 none hypothetical protein Other 5.I Unknown [1066] none YPO0886 GGAATGGTCAGATATAGTGCCCC 63 52 CGGGGTTAGCAGACCGGTC 65 68 195 none insertion sequence protein (partial) Other 5.A IS elements; Phage-related functions and prophage [210] none YPO0887 ATGAAGCTAAACGCCCGGCAGGTTGAA 74 52 CTATGCCCGTTTCCCAAATCTGCC 70 54 255 int integrase none YPO0888 TGAGCAAGCGCAAGAACTCAATAGTGAGTTACAAG 72 43 ATCGCTGGGAATAAAATGACATCACGGATGGTAT 74 41 255 lysS herC asuD lysyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Lysine biosynthesis. Aminoacyl-tRNA biosynthesis none EC:6.1.1.6 YPO0889 TTGGGCAAAGAGCGTTCTACGCTG 70 54 TCATAGCCCGGCTTTCAAGCTTGC 71 54 255 prfB supK peptide chain release factor 2 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO0890 CAGATGACAGCCATTTACCTGCGCAATT 71 46 ACAAGTGTTGAACCAGCAACTGAACACTGCGATTA 74 43 255 recJ single-stranded-DNA-specific exonuclease Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO0891 AAAAAGTTTATTGCTGCTGCCAATGTTAATGG 69 34 TCAACCACCCGCTTTTAGTGAAGCC 69 52 717 dsbC thiol:disulfide interchange protein (DsbC) Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0892 ATGAAACAGCAAGATAACCCGCTGATTG 69 43 TTAAGCGCGTGGATGATGCTGTTG 70 50 900 xerD integrase/recombinase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0893 ATGACAGGGCAAATCTGGTACACTCGA 69 48 TCAAAGTAACGCCTCCATCTCCAACAAG 69 46 582 fldB flavodoxin 2 Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO0894 TCATGTTCAAATCTGTGTTGTTTTGGAAAATAGTT 68 29 TTACTTCCATAAACGGAACTCATCTTTCTCATTAG 67 34 255 creD putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0895 ATGAAGATTGGTGTACGGTTGCTACTTGGCTAT 70 42 GTCAAACGCGCGCTAACCCCTTGC 74 62 255 creC phoM sasS putative histidine kinase sensor Broad regulatory functions 2 Broad regulatory functions [235] none YPO0896 ATGAAGCCACTGATCTGGTTGGTAGAAGATG 70 45 TCATGGCTGATAACCCAGGCTATAGCCC 71 54 699 creB blrA putative response regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO0896a GTGGCCCAGTGGCGATGTA 65 63 TCACATCGTTCCATCGTCAG 61 50 426 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0897 ATGGAAATTGATAATAAAGCCCGTATTCACTGG 69 36 TTACATCGCCACTGGGCCACG 70 62 267 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0898 ATGGCCTATCATACTCCGTTTGCTGCA 70 48 TTATTTATCTTCGGCGAGTGAGTAGGGCAA 70 43 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0899 ATGATTATGCGTTTATCCAAAGCGCTGA 69 39 TTATTCATCTAACTCGCCATCAGGCTGTACC 69 45 498 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0900 TTGAAGAATAAATCAGGGACACAACCTCTCTTTG 70 38 TTAAACATATAGATAGATCGCCATAAAATGGCAGA 67 31 702 none putative hemolysin III Cell processes 4.I Pathogenicity [38] none YPO0901 ATGTCATCATTTAAAACCCTGGGATTTTTCTTC 69 33 TCAGGGAGCAACACCGCTCTCTTG 70 58 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0902 TGGGATTATTAATACAAATGCGGGGCAGCTATTTG 74 40 GCTGACCCATCTCCCGCTGTCAGAAATACT 73 53 255 none putative surface protein (partial) Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO0904 ATGATAAATAATCGATTCATCGGCAGTTGGTC 70 37 TTTTTCACTTTTTGCCAAATTAATACCCCCA 69 32 438 none hypothetical protein Other 5.I Unknown [1066] none YPO0905 CAGTGTTGCCGCTGATATTATGGCG 70 52 AACCAATTCAGCCTGAGTATGCGGG 69 52 255 gcvP glycine dehydrogenase Degradation 1.A.2 Amino acids [23] "Glycine, serine and threonine metabolism" none EC:1.4.4.2 YPO0906 ATGAGTAATGTACCAACAGAATTGAAATATGCCTT 67 31 TTACTCTTCAATCGCCGCGAGGTAAG 69 50 387 gcsH glycine cleavage system H protein Degradation 1.A.2 Amino acids [23] none YPO0907 ATGGCTAAGCAGACCCCGCTGTATG 69 56 TTACAATACGATGGCTTTGCCCGCT 69 48 255 gcvT aminomethyltransferase Degradation 1.A.2 Amino acids [23] "Glycine, serine and threonine metabolism. One carbon pool by folate. Nitrogen metabolism" none EC:2.1.2.10 YPO0908 ATGGGGTGGCACAAATGCTGTTC 69 52 TTATTGAGAACGCTCCAGCCATTCTGG 70 48 255 visC putative monooxygenase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] none YPO0909 ATGGCGGGGGTAACTCTGGCA 69 62 TTAGCGCTCGACCCAGCCCA 70 65 255 ubiH 2-octaprenyl-6-methoxyphenol hydroxylase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] Ubiquinone biosynthesis none EC:1.14.13.- YPO0910 ATGACTCAGCAAGAATACCAGAACCGCC 70 50 TCAGTGATTCAATGCCATCAATGCTTC 69 41 255 pepP proline-specific aminopeptidase Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO0911 TGTCTATAGAGAATACATTACCAACTTACCCATCA 65 34 TCAATGCAGTGTCGGTTTATGCATTTCA 70 39 579 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0912 ATGTCTGCACAACCGGTAGATATTCAAGTTTTTG 70 38 TTATTCAAACTGTGTATCTTGACGGTCAGAG 66 39 330 ssrS conserved hypothetical protein Other 5.I Unknown [1066] none YPO0913 ATGCCGCAAAATCCACAACATGC 69 48 TCACCACTGCCACACTTTTGCTGG 70 54 597 none putative 5-formyltetrahydrofolatecyclo-ligase-family protein Other 5.I Unknown [1066] none YPO0914 ATGGCAAAAGTATCACTGGAGAAAGACAGAATTAA 69 34 TTAGTACAATAAGCGAGCGCGGATCGT 69 48 255 serA D-3-phosphoglycerate dehydrogenase Amino acid biosynthesis 1.D.3 Serine family [8] "Glycine, serine and threonine metabolism" none EC:1.1.1.95 YPO0915 AAAAAGCGGTGGGCTGGGCA 71 60 TTAGCCAATCACTTTAACGCCATTGGCCGTA 74 45 657 rpiA ribose 5-phosphate isomerase A Energy Metabolism Pentose phosphate pathway 1.B.5.b Non-oxidative branch [4] Carbon fixation. Pentose phosphate pathway none EC:5.3.1.6 YPO0916 ATGACTCCGATGAAACGCCCAGACTAC 70 52 CTACTGCCCAATAAACGAGTCCTGTCGTAA 69 47 255 iciA chromosome initiation inhibitor Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0917 ATGGAAGTCAGTGTATCTGCCAGAGATGCT 69 47 TCAGAAACGGCCGGCTTTTT 66 50 354 yggE putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0918 ATGTTAGCGGTCTATTTGCACGGTTTTATCC 70 42 TCATAGGCCGAATCCCTGTCGTG 69 57 618 yggA putative LysE type translocator Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0919 ATGGAAGAACTAAACGTAGTTGAAGGGATCAATAA 68 34 TTACTCCGGCTTCTCGGCTTCG 68 59 870 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0920 ATGTCTAAAATTTTTGATTTCGTAAAACCAGGTGT 67 29 TTACAGTACGTCGATGGCGTTCAGTTCTTT 69 43 255 fbaA fba fda fructose-bisphosphate aldolase class II Energy Metabolism 1.B.1 Glycolysis [12] Glycolysis / Gluconeogenesis. Pentose phosphate pathway. Fructose and mannose metabolism. Carbon fixation none EC:4.1.2.13 YPO0921 ATGTCTGTAATTAAGATGACCGATCTGGATCTGG 70 41 TTACTGCTTAGCGCGCTCTTCCAGC 70 56 255 pgk phosphoglycerate kinase Energy Metabolism 1.B.1 Glycolysis [12] Carbon fixation none EC:2.7.2.3 YPO0922 ATGGCAATCCGCATAGCGATAAACG 70 48 CTAGAAACCGCTTTTGGCCATCGC 70 54 255 epd gapB D-erythrose 4-phosphate dehydrogenase Central intermediary metabolism 1.C Central intermediary metabolism [63] Phenylalanine metabolism. Tryptophan metabolism none EC:1.2.1.- YPO0926 GAGTTAGCAGTTGCTGCGGCTGATC 69 56 TTACTTCAGCAGCGCCTGAGCTTTC 68 52 312 tktA tkt transketolase 1 Energy Metabolism Pentose phosphate pathway 1.B.5.b Non-oxidative branch [4] Pentose phosphate pathway. Carbon fixation none EC:2.2.1.1 YPO0927 ATGAAAATTCGTACCTCAATGATTGCACTGAG 69 37 TTACTTCTCCGCCGCAATACGTTGG 70 52 753 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0928 ATGGGCTGGTTCAGCGTCTGTAAGG 70 56 CTACTCGCCATCGCCATCCAAATTAAC 69 48 321 none putative Rieske protein Other 5.I Unknown [1066] none YPO0929 CATGCAGGAGGTAGCCATGAATGATCGAAAT 73 45 GATCGGTTTCTTTTACCTGACCGCGGAAATGT 74 47 255 speA biosynthetic arginine decarboxylase 1.E Polyamine synthesis [5] Glutamate metabolism. Arginine and proline metabolism none EC:4.1.1.19 YPO0931 ATGGCTAAACACCTATTTACGTCAGAATCTGTCTC 68 40 TTATTTCAAACCCGCAGCATCACGTAATAAC 69 39 255 metK S-adenosylmethionine synthetase Central intermediary metabolism 1.C Central intermediary metabolism [63] Methionine metabolism. Selenoamino acid metabolism none EC:2.5.1.6 YPO0932 ATGTCAGCTTGCATCTGGCTATCCACC 70 52 TTAATCAGGATTTATTGTGATGAACTGGAGTTTCT 67 31 558 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0933 ATGTTACGCAATATTTTGTTCTTGCTGGTTTTATC 68 31 TTAGCTTTTGGGTCGCTGACAAGCG 70 52 708 endA nucM endonuclease I Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO0934 ATGCGTATACCCCGCATTTACCACC 69 52 TTATCCCAGATCGCCAAACCGC 69 55 732 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0935 ATGATTAAGCTCGGTATCGTAATGGACCCTATTTC 70 40 TTAGGCCTTTTTGTCAGCCAAACGTCTT 69 43 255 gshB gsh-II glutathione synthetase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.10 Thioredoxin [10] Glutamate metabolism. Glutathione metabolism none EC:6.3.2.3 YPO0936 ATGAATTTACAGCATCATTTTCTTATTGCCATGC 70 32 TCAGGCATGTCCTGCTTGCGG 71 62 564 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0937 ATGGCTAATCGCACAATTATTGCTTTTGATTTT 70 30 TCAACCTGCTTGCTCATCAAACCAGC 71 50 423 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0938 ATGACAAAAGTGACTGTTGCTGCGACTC 69 46 TTATCTCCGGGTCTTGCCGTCTGA 69 54 885 none putative carbon-nitrogen hydrolase Other 5.I Unknown [1066] none YPO0939 ATGTCGGTGCAAGACACGATGTTACAAC 69 46 TTAAGCCGCTGGGATCTGCTGAGTAA 69 50 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0940 ATGGATTTCACAAGCCTGAATAATCAACATTCA 70 33 TCAGTGATTGATAGCCAAAACCCCCTG 70 48 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0941 ATGAGTACTATCCAACAGAATCTACAGGA 61 38 TTAATCCGCGTTATAAACGCG 62 43 699 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0942 ATGCAGCATCGCAATATTACATTCATTGGT 69 37 TTAGAACAGTTTTTCCATCTCTTTTGCGCG 70 40 822 proC putative pyrroline-5-carboxylate reductase Amino acid biosynthesis 1.D.1 Glutamate family [19] Urea cycle and metabolism of amino groups. Arginine and proline metabolism none EC:1.5.1.2 YPO0943 ATGCTAACGCTGACTTTTCTGGCAAAAAC 69 41 TCACAGCATGACCCACATCGCTC 69 57 555 yggT putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0944 GTGAGTGCAGTCCTCTCCACCGAAA 69 56 TCACTCGAGCAGTATGGTGACTTCTGGC 71 54 291 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0945 AAAAATAGTATTAGCCACCGGCAACCCC 69 46 TTAAGCATCGCGCAGCGCA 69 58 594 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0946 ATGCTTAAATTACCCCCGCTC 61 48 CTATAAAAATAGCTCCAGTAGCGAGTTAA 60 34 1131 none putative oxygen-independent coproporphyrinogen III oxidase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] none YPO0947 GAGGCTGGCATTTGAGGGTGAAAAA 69 48 GGGCCTGTTGGGCTGCTATAAAAGG 70 56 255 none putative virulence determinant Cell processes 4.I Pathogenicity [38] none YPO0948 ACATAAAATAAAAGTATTACGTACTGCAGGGTTGG 66 34 TCAGGCTATCCTGCAACACGCCA 71 57 531 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO0949 GTGGTAACAACGTTAGATAATGCCTTACTAAACGA 67 37 TTAAAAGATAGAACGACCCATTTGTTGCGC 70 40 255 none putative glutaminase Other 5.I Unknown [1066] Glutamate metabolism. D-Glutamine and D-glutamate metabolism. Nitrogen metabolism none EC:3.5.1.2 YPO0950 ATGGCTAAGAATCGCAGTCGTCGTTTAC 68 46 TCAATCCCACCAGATATCAAATAACTCACTGGT 69 39 327 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0951 ATGATAAATGACGTCATATCTCCGGAATTTGAT 68 33 TTATTCTTTCCTCTCAAACATCAAATCCCAAAC 68 33 720 none Putative methyltransferase Other 5.I Unknown [1066] Ubiquinone biosynthesis. Androgen and estrogen metabolism. Histidine metabolism. Tyrosine metabolism. Tryptophan metabolism. Aminophosphonate metabolism. Selenoamino acid metabolism none EC:2.1.1.- YPO0952 GTGAGCGCCGCTAACGCCG 71 74 CAAATAAAGCTGGTTGGGTAGGCGATTGCTTTGT 74 44 255 mutY mutB A/G-specific adenine glycosylase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO0953 TTTTTGCACGTTTTTAAAGAAGGATGCTGAA 69 32 TTACTTACTCGGAGGCGTATAACCTGCAATATGA 70 41 273 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO0954 ATGGCTTGTAAGATGAAGAAAATTTTAGCTTTGCT 69 31 CTAATAGCGGCGATAGTTCTTCTGTGCG 69 50 255 mltC membrane-bound lytic murein transglycosylase C Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Nucleotide sugars metabolism. Aminosugars metabolism none EC:3.2.1.- YPO0955 ATGCGTCTGTTGTTACTTATTTTCCTGCTCTG 69 41 TTATTCATTATCCAAATGGCTCCAGAAAGTTCC 69 36 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0956 GCGATCCATGTTCATGCGATCTACG 70 52 AGCTGCCATTTGAGTTGATAGCCGG 70 52 255 none putative hydroxamate-type ferrisiderophorereceptor Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO0957 ATGGGATCCATAGTCAAAGAGGTTGATGAC 68 43 TCAGGCTTTACTCCGCGATTTTAGGCT 70 48 255 none putative sugar transport system permeaseprotein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0958 GTGGATCAGTACGCTATTGAAGTCATACAGGTG 69 45 GGGAATGGCATAGCGCATGATATTTTCTTCTGAAA 74 40 255 mglA rbsA putative sugar transport ATP-binding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0959 ATGAAAAAGAGACTAATTGGCCTGCTGTTGG 70 42 AGAAAATCGAATCTTCTTTATAATATTTGTCGACG 66 29 255 none putative sugar ABC transporter periplasmicbinding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0960 CAATTTACCGGCATTGCATCAGTGC 70 48 CTGAATATTGGCGTCTTGCGGGTTC 70 52 255 speC ornithine decarboxylase 1.E Polyamine synthesis [5] Urea cycle and metabolism of amino groups. Arginine and proline metabolism. Alkaloid biosynthesis II none EC:4.1.1.17 YPO0961 GTGGATCAGTTATTCAACATCAGCC 63 44 TTAAAAAACCTCTTTTCTCTCGAAAGT 60 30 309 none integrase (partial) none YPO0962 ATGCAACCGGCTATCAGCCTGT 67 55 TTAAGAAAATGGATACTTCTGAGTGGGTGGTTTAG 68 37 636 none hypothetical protein Other 5.I Unknown [1066] YPO1472YPO0967YPO1475 YPO0963 ATGTGGTCATTTGTGGGCAACAAAAAG 69 41 TCACACTAGGTAATGCTCACGCTCAATGAA 70 43 369 insB insertion sequence protein Other 5.A IS elements; Phage-related functions and prophage [210] YPO0967a YPO0964 ATGGCTAAGGTTGATGTGAAATGTCCATTTT 69 35 TTACACGCTGCGGCGAGAGTTTTT 69 50 276 insA insertion sequence protein Other 5.A IS elements; Phage-related functions and prophage [210] YPO0968 YPO0965 TTGACATTGAAATATTTTTATATTTTATTTTTTAC 59 11 TTATTTTGAGACTAACTCCCCTCCA 61 40 750 none hypothetical protein Other 5.I Unknown [1066] none YPO0966 TGATTATCAGCCCTTTATTTTTAAAAGATAAGTCC 65 29 GCCACCCGGACAAGTGATGGTT 69 59 255 none putative kinase Other 5.I Unknown [1066] YPO1473 YPO0967 ATGCAACCGGCTATCAGCCTGT 67 55 TTAAGAGAATAGCCAACGTTTAATGGGGTCTTC 69 39 636 none hypothetical protein Other 5.I Unknown [1066] YPO1472YPO0962YPO1475 YPO0968 ATGGCTAAGGTTGATGTGAAATGTCCATTTT 69 35 TTACACGCTGCGGCGAGAGTTTTT 69 50 276 insA insertion sequence protein Other 5.A IS elements; Phage-related functions and prophage [210] YPO0964 YPO0968a ATGGAAAGTCAACAAAAAAATGATTG 62 27 TCATCTTACCTTGAATGAAAGATATATGC 61 31 381 none hypothetical protein Other 5.I Unknown [1066] none YPO0969 GTCGTGTCGTTTCGAATGCCTTCAA 70 48 TTTGCGTTGATTGAAATCTGCGCTC 70 44 255 none hypothetical protein Other 5.I Unknown [1066] none YPO0970 GTGAACGACACTTACGGACACATCGACA 70 50 TCAGGAAAAAGTGAAATGACTGGTGGGTT 69 41 255 none conserved hypothetical protein Other 5.I Unknown [1066] YPO1472YPO1475 YPO0971 TAATGGCAGCGCTGATAAATTCGCC 70 48 AGTGGGCGGTAGATCAAGGTCTGGA 69 56 255 clpB3 Clp ATPase Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO0973 ATGGCAATTCCAGTTTATCTGTGGCTGA 69 43 CTATGCGGTGGCGCGCTCAT 70 65 492 none conserved hypothetical protein Other 5.I Unknown [1066] YPO1470 YPO0974 ATGGTGGCGTTGTGCAGCAGC 71 62 TTTAAGCGACAGAATGTGGTTGGCCT 69 46 474 none putative OmpA-family membrane protein Macromolecule metabolism Cell envelope 3.C Cell envelope [20] YPO1469 YPO0975 ATGAATCCTCACCTAACCGAACACCCC 70 52 TTACACCGGCTCCGGCAGTAAGG 70 61 687 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] YPO1468 YPO0976 ATGAAAATTGAACGCCCTCTGTGGG 69 48 TCATGCGCGTAGCACCGCA 70 63 255 none conserved hypothetical protein Other 5.I Unknown [1066] YPO1467 YPO0977 ATGCTGATGTCTGTACAGGAAAACCGTG 68 46 TTATGCCTTAGCCTTTGGCATTTGGGAAA 72 41 255 none conserved hypothetical protein Other 5.I Unknown [1066] YPO1466 YPO0978 ATGTCCTCTTCAAGCTTCCAAAATGAGATACCTAA 69 37 TTAACCCTCTTTTGGCGCCAGGG 70 57 501 none conserved hypothetical protein Other 5.I Unknown [1066] YPO1465 YPO0979 ATGGCTAATGTTGATGTAAAATATCTGA 60 29 AACAATTTGTATCTTCATACCCTATTGG 61 32 170 none insertion element protein (partial) Other 5.A IS elements; Phage-related functions and prophage [210] none YPO0980 ATGTTAAAACTAATTATTTTTATTATCTCAGTAAT 57 14 AATGAAAATATATCCATTTACTACACTTGCC 62 29 306 none putative phage protein (partial) Other 5.I Unknown [1066] none YPO0981 ATGGCTTGCATTAACGTTCATTGTCCC 70 44 TTTTTAAAGTGCGGATAACGGTATTGATACCGA 70 36 264 insA insertion element protein Other 5.A IS elements; Phage-related functions and prophage [210] none YPO0982 ATGATGAATAAATTTTTTAAAATAATATCGATAAA 60 11 TTATTCGGCTATTTTTAATTTATATTCTTTACC 61 21 396 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0983 ATGAATGGAAAGATTGACCGG 61 43 TTAACTCAACGTCAGCACCCA 62 48 651 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0984 ATGTTAGAAATTTTCGATGTCAGATACGACGAGTT 69 34 TTAAGCCGATTCTGGCATAACGGGC 71 52 651 yspI N-acylhomoserine lactone synthase YspI Broad regulatory functions 2 Broad regulatory functions [235] none YPO0985 ATGCATTCTGTTTTCAATAGGAGTAACGAGGTAA 68 35 TTATGCCAGAATCGGCTTAATAATTTCCAGTTC 69 36 744 yspR quorum-sensing transcriptional regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO0986 ATGCTAACACGCCGGAAATTTTTGATGAT 70 38 CTAGCGCTGTTGCCTGAAAATCCATTC 70 48 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0987 ATGACAAACAAAATAATGCCAAAAG 60 28 CTATGTGATCTTTAAAATATCCTTAGGGTC 60 33 834 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0988 ATGCGCATATCCTCAGAGTCTGACGC 70 54 TTACTCTCCCACAGAATGGGCGGTT 69 52 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0989 ATGACTATCCCAGTAGAAACCTTAGCAACCGA 69 44 TTAGGCTATCGCCGCACAGGTAGC 69 58 609 iucA putative siderophore biosynthesis protein IucA(pseudogene) Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO0991 ATGGGGCCACACGCTAAGTTAATACACTC 69 48 TCATCGTGTACCCTCCCGAAAGAAATC 69 48 255 iucB putative siderophore biosynthesis protein IucB Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO0992 GTTAATCGCCACATGATCGCTAAAATCCTTAGCG 73 44 GACCAAATAAAGGGGGTTATCCAGATCCTGCAA 73 45 255 iucC putative siderophore biosynthesis protein IucC Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO0993 ATGAATCAGCCTCTGGATTTCATCGG 69 46 TTAAATGTCGATGCAGTTGAGCACGG 69 46 255 iucD putative siderophore biosynthesis protein IucD Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] Lysine degradation none EC:1.13.12.10 YPO0994 AATGGCGCAAACAACTTGGGTGATT 70 44 TGGGTGAGCCGTAGGTTGGGCTATA 70 56 255 iutA putative ferric siderophore receptor Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO0995 CACCTCTGTAGCTTGAAGGACGAAGGGGATAAAAG 73 49 TTATTTGCCTACTGAAGAGTGGAATCTCCCTTG 70 42 255 none Sodium:galactoside symporter family protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO0998 CCCGTTATTCAGTGATCAATGGGCA 69 48 TGCCCTTCATGTGACTCGGTGAGTT 70 52 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO0999 ATGACCAATGCCAGACCGC 64 58 CTACGCTTTTTCGATCAGGAAG 60 45 198 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1000 ATGTTTACACTGAATTGGGTTCGGTCCAC 70 45 TTAATTAGCCGTCAATGGCGCTGC 69 50 255 none putative drug efflux protein Other 5.D Drug/analogue sensitivity [28] none YPO1001 AAATGGCATCTCGGTACGCAAACGT 70 48 CTAATGCCCCGTTATCGCTGCGTAC 69 56 255 none putative integral membrane efflux protein Other 5.D Drug/analogue sensitivity [28] none YPO1002 TATACAATAAAGAATTGTATAGTAACAGCCCCACA 65 31 CTATTTACTCTCTTTGAGCGTTCCCGGTTTC 69 45 255 none enterotoxin-like protein Cell processes 4.I Pathogenicity [38] none YPO1003 AAAAACATTCGTGGTAACTGCCCGG 69 48 TTATTTTTGCAGTTGCAACGTCGTCAAAC 69 38 588 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1004 CTAATGTGACCGGAGATATTGATG 60 42 GTTACCGGTCAACACATGATTAAA 60 38 1400 yapH putative autotransporter protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO1005 CAGACCGTGAAATCCATTCTGCACGG 73 54 GGAGGCTCCTTTGGCAGAGAGAACCTCAT 73 55 255 none putative antigenic leucine-rich repeat protein Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO1006 ATGTATCTATCAAATATAACCTCGAACGTGTCAA 66 32 TCAGCTAATCCGTGGCCCCTGATAAT 69 50 876 none putative antigenic leucine-rich repeat protein Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO1007 GAAATCCATTCTGCACGGACATCAACAGC 73 48 GGAGGCTCCTTTGGCAGAGAGAACCTCAT 73 55 255 none putative antigenic leucine-rich repeat protein Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO1008 ATCGGCAGACCGGCATACTGAACGC 74 60 ACTCTGGAAACCTAATGGAATATCCAGACCCCAGA 73 46 255 none putative integral membrane efflux protein Other 5.D Drug/analogue sensitivity [28] none YPO1009 ATGACTATCGCACTCTCAGAACAACTGACAAAC 69 42 TTACGCTTTGGCCGCAGACAAAC 69 52 255 none probable peptidase Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO1011 ATTACCCTGCCTGGCATGGTCACAA 71 52 AAAATTAATAGGTTCACCCGCGCGC 70 48 255 none putative TonB-dependent outer membrane receptor Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO1012 CCACAATACACTGGCAGGTAACTC 62 50 CATCAGCATCATCACTGAACGTAG 62 46 ~1400 none putative peptide/polyketide synthase subunit (pseudogene) Other 5.I Unknown [1066] none YPO1014a CAAATAACGCTCCCGCTACA 61 50 AAGGCATAAATGGATGCCTGC 63 48 177 none prepilin peptidase (partial) Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO1015 ATGCCTTTAGTGGTCAATGTCTTGTCTACCC 69 45 TCATACGTTATTCCCACGGATAAGGTAAGTCAC 69 42 609 none putative prepilin peptidase dependent protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO1016 ATGACGCAGGTATTTCAACGA 61 43 TTAATCGAGGCAAAACTGTGC 60 43 471 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1017 TTGCCTCGATTAATAACCAAACA 61 35 CTAAATCATCTCAGTTGAACAAAACCA 62 33 411 none putative prepilin peptidase dependent protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO1018 AAGTGATGATGGGGATCGGCGTAAA 70 48 AATAAGTGCTGCGTCACCCGTTGTG 69 52 255 recC exodeoxyribonuclease V gamma chain Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO1019 GGCTTGGCCCACTACTTGGAGCATA 69 56 GACCCGTTCCATATTGGCCAACTGT 69 52 255 ptrA ptr protease III precursor Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO1020 TGGAAAAATTTCGCCAGTCGGTGTT 70 44 GCTCACCTACGGCATCAATGTCCAA 70 52 255 recB rorA exodeoxyribonuclease V beta chain Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO1021 GCGCCCACTGGATGTGCAGTTTTCAC 74 58 CCGGAGAGTCGGTGTACGTATGGCATGACTTA 74 53 255 recD exodeoxyribonuclease V alpha chain Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO1022 GTGAAGGAACGTAGTACTGAACTGGTTCAAGGAT 69 44 CTATAGATCGGCCAGTAAGATCTTCGAACGG 70 48 255 argA amino-acid acetyltransferase Amino acid biosynthesis 1.D.1 Glutamate family [19] Urea cycle and metabolism of amino groups none EC:2.3.1.1 YPO1023 ATGGCAGATTCAAATCATAATTCTGGTCGTC 69 39 GCCATTGCCCCGCCATTAGCAA 73 59 255 none N-acetylmuramoyl-L-alanine amidase AmiCprecursor Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Peptidoglycan biosynthesis none EC:3.5.1.28 YPO1025 ATGACAAGTCGTTGGGGCAAATACCTACTG 70 47 TTATCGATCCTGATTATTCACCAGTAATGACGAA 69 35 255 none membrane-bound lytic murein transglycosylase Aprecursor Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Nucleotide sugars metabolism. Aminosugars metabolism none EC:3.2.1.- YPO1026 ATGAGCACAGCCTATTCCGAAGCTTACC 69 50 TTATGACGCAGTGGCGGCTGACT 70 57 828 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1027 ATGATGATTGCCCCACACCCATTT 69 46 TTATCGTTCTGCGTATTTGGCCGC 69 50 444 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1028 ATGAAAGTTTTTAATCCAATGGATTTTCGTCG 69 31 TTAGTCTCGAAGCAGTTCCAATGCCTTACC 70 47 255 none putative aminotransferase class V Other 5.I Unknown [1066] none YPO1029 ATGTCAAAACGATTACCACCCCTGAATG 69 43 TCAGTTTTCATAACGAAAACGTAATTTCTCCTGC 70 35 255 gcvA glycine cleavage system transcriptionalactivator Broad regulatory functions 2 Broad regulatory functions [235] none YPO1030 ATGAACAGTCGTTTAATGCTGATATTTTCCGC 70 37 TTATTCATGGCGTTCTGCCCTTTTTCTTAG 69 40 396 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1031 ATGAATAATAAAATTGCTTTATATTGCCGCTCCG 69 32 CTAATAACGCTCATCACGGCGGCC 71 58 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1032 ATGCAAATACACCTTCTTATTGTCGATGCTCTTAA 69 34 TTTTTCAAACGTAACTGTTGTAGATTGCCACTCA 70 35 756 xni exo exodeoxyribonuclease IX Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO1033 GGCTCAATGGATCTGTTATCACAGCTCGAAGT 72 47 GGTGTATAGACGCTACCTGGTAACTTCATCCGAT 70 47 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1034 ATGTCTTCATATCAAAACCACAAGGCGTTG 69 40 TTATTGCCGTGCCAAGCGGC 70 60 846 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1035 ATGGACTTGAATATTTCAACGGCACTTCG 69 41 TTACTCAGGCAATACTGGCCGTAATGCA 70 46 552 syd ydr csrB Syd protein Other 5.I Unknown [1066] none YPO1037 ATGAGTACAGAAAATAAGGTGCGTCAAAGCTTACA 69 37 TTATTCACTTTCTTTATTCAACAGATCATCAAGGC 68 31 333 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1038 ATGCTGGAAATTATCTATCAAGATGAACACATTGT 68 31 TGACTGGCAGTCAGCGGAAACTCA 70 54 774 none Conserved hypothetical protein Other 5.I Unknown [1066] none YPO1039 ATGGCTCAAGTTGGGATTTTTGTTGGTACT 69 40 TTACTGAAGCAAACGCCCCCATTGT 70 48 450 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1040 ATGTATGACAATCTAAAAAGTTTAGGCATCACACA 67 31 TTAGCGGCCATTGGTGAGCTTTTCTAA 69 44 390 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1041 ATGCAGCAACTACAAAACGTTATTGAAACCG 70 39 TTAGTCGATGGTGCGTAATAACTCATTAATACCGA 69 37 825 dapD 2;3;4;5-tetrahydropyridine-2-carboxylateN-succinyltransferase Amino acid biosynthesis 1.D.2 Aspartate family [24] Lysine biosynthesis none EC:2.3.1.117 YPO1042 CAGTTTCTGGCCCTCCCCTCAATTT 69 52 GATGGTGGTGATACGTGCACTGTGC 69 56 2682 glnD [protein-PII] uridylyltransferase Amino acid biosynthesis 1.D.1 Glutamate family [19] none YPO1043 ATGGCAATCTCAATCAAAACACCTGAAGATATTC 70 35 TTACTCGTGCGTTATGATGTTGGGGATAGT 69 43 792 ampM map b0168 methionine aminopeptidase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO1044 ATGGCAACTGTTTCCATGCGCG 71 55 TTATTCAGCTTCTACGAAGCTTTCTTCCGC 69 43 726 rpsB 30S ribosomal protein S2 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO1045 ATGGTTGCTATTACCGCTGCTTTGGTAAAAG 70 42 TTAAGACTGTTTGCTCATTGCTGCAACTTCA 70 39 858 tsf elongation factor Ts Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO1046 ATGGCAACCAATGCAAAACCCGTA 69 46 TTATTTAGCGATCAATGTCCCTTCATTCTCACC 70 39 726 pyrH smbA uridylate kinase Purines; Pyrimidines; nucleosides; nucleotides 1.F.5 Miscellaneous nucleoside/nucleotide reactions [9] none YPO1047 GTGATTAACGAAATTAGAAAAGATGCCGAAGTG 69 36 TTAAAAATCCATCAACTCAGCTTCTTTTACCGC 70 36 558 frr rrf b0172 ribosome recycling factor Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO1048 ATGAAGCAACTGACTATTCTTGGCTCTACTGGC 70 45 TTAATTATTTAATTTTGCAATGACTTGGGCCG 69 31 1197 dxr b0173 1-deoxy-D-xylulose 5-phosphate reductoisomerase Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO1049 ATGTCGCCTGTAAAAGAAGATAGGGCTAACTTGT 69 41 CTAGGATGCAGTGGCATCGATAGGTGTAGTT 70 48 759 uppS rth undecaprenyl pyrophosphate synthetase Central intermediary metabolism 1.C.3 Sugar nucleotides [11] none YPO1050 TTGCTGAAGTATCGTCTCATAACTGCTTTGATTTT 69 34 TTAAAACACTAACAGCATTAAGCAGGCAAATACCG 70 37 849 cdsA cds phosphatidate cytidylyltransferase 1.H Fatty acid biosynthesis [33] Glycerolipid metabolism none EC:2.7.7.41 YPO1051 ATGAGCATACTCTGGAGCCTGGCTGCG 74 59 GGGAGAAATCATTGAAAAGTGCAAGCCCCATTA 74 42 1356 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1052 CACGATTGCCAGCATCACTTTCTCC 69 52 ATGCTACACCCGCAGACACACGAAT 69 52 2388 none putative surface antigen Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO1053 GTGAAATCTGACGCTTCATCAGGTGG 68 50 TTATTTAACCTGTTTCAATACGTCAGCAGTAATGT 66 31 588 ompH cationic 19 kDa outer membrane proteinprecursor Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO1054 ATGCCTTCAATTCGACTGGCTGATTTAGC 71 45 TTATTCTTTATCGATTTTACGCTCAACAGCTTTT 67 29 1023 lpxD firA omsA UDP-3-o-[3-hydroxymyristoyl] glucosamineN-acyltransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO1055 TTGACTACTGACACTCATACTCTGCATATTGAAGA 67 37 TCAGGACTCCTTAACGACAGGATTTACAACATC 69 42 546 fabZ sefA (3R)-hydroxymyristoyl-(acyl carrier protein)dehydratase (EC 4.2.1.-) 1.H Fatty acid biosynthesis [33] none YPO1056 GTGATTGACAAAACCGCCTTTATCCATCC 70 45 TCAGCGAATAATACCGCGGGTCG 70 57 789 lpxA acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Lipopolysaccharide biosynthesis none acyl-carrier-protein YPO1057 ATGCAAAATAGCCCATTGACTGCTGATTGTTCATT 74 37 TCATCGATCTGCCAGCTCCAATACAG 69 50 1185 lpxB pgsB lipid-A-disaccharide synthase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Lipopolysaccharide biosynthesis none EC:2.4.1.182 YPO1058 ATGAGCGAGACTTTTATTTACCCACAGGCTAATTT 70 37 TTACACCAAACCCAGCACCCGTTTC 70 52 597 rnhB b0183 ribonuclease HII Macromolecule metabolism Degradation of macromolecules 3.B.1 RNA [13] none YPO1059 CCTCAGCAGTTTATGCGCGATGAAG 69 52 GAACTCATCAATGCTGCACGGTGTG 69 52 3516 dnaE polC DNA polymerase III; alpha chain Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] DNA polymerase none EC:2.7.7.7 YPO1060 ATGAGTCTGAATTTTCTTGATTTTGAACAGCCG 71 36 TCAGCAATAGCCGTAGTTCATCAAGCG 69 48 960 accA acetyl-coenzyme A carboxylase carboxyltransferase subunit alpha 1.H Fatty acid biosynthesis [33] Fatty acid biosynthesis (path 1). Tetracycline biosynthesis. Pyruvate metabolism. Propanoate metabolism none EC:6.4.1.2 YPO1061 GTGCTGGCAATTAATAAGATTCACCATATTGC 68 37 TCATTCCGCTTTCAATTCATATAGCTCCAGT 69 39 399 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1062 AGTCACCTCGAAACCCAATGTGTTACTTAACCCTC 72 46 TTATCCCAATCTAAGTGGTTTATCCCAATCTAAGT 67 34 1383 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1063 ATGATGAAATTAGTTGTCAGTATGGCGGTGTTACT 69 37 TTATGGCTTTAGGCTGGCATAATACGCAG 69 45 318 none putative cytochrome Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO1064 ATGTCGATGAGTGAAGAGTATCAACCCATCA 69 42 CTATGATGCGCTCACTACGACCGTTCC 71 56 261 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1064a GTGCAGCAATACTGTGAATTAGTACGCCGT 70 47 TCACTCATCGACATAATCGCTCACCAATAAG 70 42 201 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1065 ATGGCACTAAAAGCAACTATCCATAAAGCCG 70 42 TTATTGCCCGTAGTTTTGCCATTCGG 70 46 549 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1066 ATGGCAAAACTACGGGCAATAAGTGTGTT 69 41 TCACTCTTGATGTATTTTACCACGCAGCG 70 45 441 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1067 ATGACTTCATTCCATATATATCGGACACAGTATG 66 35 TTTTTCTCACAACTTTTATTGGCATTAAACTGAA 67 26 729 cutF nlpE putative copper homeostasis lipoprotein Cell processes 4.G Detoxification [10] none YPO1068 GCTCTCCACTCAGAAAGAGACACCTGCCGAT 74 55 AAGAACTCAACAATTTCGCTGGTCTTAATCATTTG 70 34 1719 proS drpA prolyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Arginine and proline . Aminoacyl-tRNA biosynthesismetabolism none EC:6.1.1.15 YPO1069 ATGAGTACATTCTCTTTTAATCAGATCGGCGTG 69 39 TTAGCGTGGGTCGAGTGATAACACTTCTGT 70 47 708 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1070 ATGCGTGCGTTACCTCTGTGTCTGTTAG 69 50 TCATTTAGATGAAACGTTCAGTGCTGAACCC 70 42 408 rcsF putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1071 ATGTCTTTAAAATTCAAATCTATCGCAGCAATTAG 67 29 TTACCAGCCTTTTACTGCGCCACC 69 54 816 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1072 ATGTCTGAGGCAATGATGTGGTTAATGGC 70 45 CTATTTGTGCGTAACGGCTTTGACTATCCG 70 47 654 none ABC transporter permease protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1073 ATGATTAAACTCACCCACATCAGCAAAGTGTT 69 37 TCAGACATAACCCAGAACCTCTACTTTCACATGAT 70 40 1032 abc ABC transporter ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1074 GTGACTCAGTCCGTTCCCGCAATATTTT 70 46 CTATTTATAACGCGCTTTTATTGCTTTTGGTAGGT 68 34 567 16S_rRNA 23S_rRNA 5SrRNA conserved hypothetical protein Other 5.I Unknown [1066] none YPO1075 ATGAGCATACCTGTATTCGGATTAGGAACTTTTCG 71 40 TTAATCCCATTTAGGTGCTAAACCATCAGGG 70 42 804 none putative aldo/keto reductase Other 5.I Unknown [1066] none YPO1076 TTGAGGTGGTTTTTTATTTTGGTG 61 33 CTATTGCTGATATATCAGTCCTTTTCTGT 61 34 465 none hypothetical protein Other 5.I Unknown [1066] none YPO1077 GTGCCGAAAAGAACATATGCAATGCG 70 46 TTATGGTTGGAATTCGACAATGAGTGGG 69 43 783 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1078 ATGATTGCTCGTCTTTTAAGCAACCACATTG 70 39 CGCCTCCGGGGTTGATTTGTCGTTAAC 74 56 255 mltD dniR membrane-bound lytic murein transglycosylase Dprecursor Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Nucleotide sugars metabolism. Aminosugars metabolism none EC:3.2.1.- YPO1079 ATGAATCTTATCAGCATTCCGGCATTTCA 70 38 TCAAAAGCTGTCTTTTCGGGAGCGTAAT 69 43 756 gloB putative hydroxyacylglutathione hydrolase Central intermediary metabolism 1.C Central intermediary metabolism [63] Pyruvate metabolism none EC:3.1.2.6 YPO1080 ATGAAACCAGCGCAAATACGCCAA 70 46 TCAGGGTTGATCCCGGTAACTTTTTGTT 69 43 720 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1081 ATGACTAAACAGGTAGAAATTTTCACCGATGGC 70 39 TTAATCAGGGTTATAGCCCGTATCATCGAGTG 70 44 465 rnhA rnh sdrA dasF herA ribonuclease HI Macromolecule metabolism Degradation of macromolecules 3.B.1 RNA [13] none YPO1082 ATGATCATTACACCGACCAGACAGATTGTTCT 69 41 TTATTCTGCTTTTGTCTCTTCTTCTGCCTCAAG 69 39 765 dnaQ mutD DNA polymerase III; epsilon chain Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] DNA polymerase none EC:2.7.7.7 YPO1083 AAAAATCTCGGCTAGCAGCATTAACCCCC 71 48 GGGCGTATAAACAGAGCCGCATTGTTCG 74 54 255 none putative permease Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO1084 ATGCATGAGACTGAACTTAATCATGA 61 35 AATATGCCTATCGGGATAACTGTCC 63 44 219 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO1087 TTGATGAAAACGATCAAACACTATCT 60 31 TTAAATAATCTTTAAGACACACAATAGCCTG 61 29 312 none putative prophage protein none YPO1088 ATGATTATGGCCAAAGCCCG 64 50 TCATGCGGTAATCGATGCA 62 47 321 none putative DNA-binding prophage protein none YPO1089 ATGAAAACACCACTCATTCTGCTCGAACG 71 45 TTAGTTTCTTGCTGTATTGCTTAATGAATTAGGGC 68 34 255 none putative regulatory prophage protein none YPO1090 ATGAGTAGGTTTGTTTCCGACATCATTCGC 70 43 TCATATCCATTCCCTGGGATTGTAGAGTTG 69 43 255 none putative prophage DNA primase none YPO1091 TTTTTCTGGCGGGCGCTTTG 69 55 CTACTCATGGTTAGCCTCCTCTGCATCC 68 54 543 none putative prophage protein none YPO1092 ATGAGTCGGTTAAGTCGTGAGATGAAAATGC 70 42 TCAGACATAGTTCGCCTCCTTGCGG 71 56 888 none putative DNA-binding prophage protein none YPO1092a GTGACGCCACAGCACAAAC 61 58 TCAACTAGCTGCATTTCTCTGGC 63 48 291 none hypothetical protein Other 5.I Unknown [1066] none YPO1094 TTGCCCATCGGGGATACTG 64 58 TTAGCACGCGCCAGAGATT 62 53 174 none hypothetical protein Other 5.I Unknown [1066] none YPO1095 TTGCAGGTCATTCGTATCATCC 62 45 TCATGCACTATATGCATGCAGTG 62 43 228 none hypothetical protein Other 5.I Unknown [1066] none YPO1096 TTTTTGGACTTTTGGCTGTGAGCCC 69 48 TCAATCGAAAATAACTTCATTTCGCAGTTTTGA 70 30 255 none putative phage protein none YPO1097 ATGGATAGTGAAGACACATCTGACAATCCCTTG 70 42 TTAGTTTGTTGCCTCTACCATTTCGTAAATGATCG 71 37 255 none putative phage protein none YPO1098 ATGGCAAGGACAACACGCCCC 70 62 TACTTCTTTTAGTGTATATCTCTAATCCCCACCAA 65 34 255 none putative prophage integrase YPO1086aYPO2641 YPO1101 AAAAAGCATACAAACCCGGTTCCGC 70 48 TTAACGATTTGCGTGCTTCATGATGC 69 42 495 smpB smqB b2620 SsrA-binding protein (small protein B) Macromolecule metabolism Synthesis and modification of macromolecules 3.A.3 Ribosome maturation and modification [6] none YPO1102 ATGCCACAGATTAGCCGATCTGCACT 69 50 TCAGGCACTGTAGACCTCTTTAGCCCG 70 56 435 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1103 GTGCCTGATATTCGCGTTGAGGTTGT 69 50 TTTTTGCCTGCTCAGCTCGCTG 69 55 285 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1104 ATGCGCTGTAAAATGCTGACTGCC 68 50 TTAGCTTCCGGTTAACGCGGGC 69 59 342 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1105 CAATTAACCATCAGCAACTTTGCTATTGTGCGTG 73 41 CTATGCAGCAAGCAATTCTTTTGCGTTT 69 39 255 none DNA repair protein RecN Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO1106 GAATAATAGAAGATTCGATTGTATTGGTATTGTCG 65 31 TTTTTGACCAACCCAATTTGGTGCTTAAC 69 38 882 none conserved hypothetical protein Other 5.I Unknown [1066] Nicotinate and nicotinamide metabolism none EC:2.7.1.23 YPO1107 ATGAGTAGTAAAGAACAGAAAACGCCAAACGAG 69 39 TTACGATTTCGCTTTAGATACCGCAACCA 70 41 579 none heat shock protein GrpE Other 5.F Adaptions and atypical conditions [36] none YPO1108 AAAAAGCGACGCTGAATTTAGGCGAA 69 42 TTTTTCAATTGGCTCTGGAAATCACGTTC 70 38 255 gltA gluT icdB citrate synthase GltA Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Glyoxylate and dicarboxylate metabolism none EC:4.1.3.7 YPO1109 AAAAACAAAGACCTGTCAATTTGGATCTGCA 70 35 TTACCATACGAGGACTCCAGCCAAAACTG 70 48 390 sdhC cybA succinate dehydrogenase cytochrome b-556subunit Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Oxidative phosphorylation. Benzoate degradation. Butanoate metabolism. Reductive carboxylate cycle (CO2 fixation) none EC:1.3.99.1 YPO1110 ATGGTAAGCAATGCTTCTGCGTTAGGG 69 48 TTAAGCTCCCCACACCACAATTGTTCC 70 48 348 sdhD succinate dehydrogenase hydrophobic membraneanchor protein Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Oxidative phosphorylation. Benzoate degradation. Butanoate metabolism. Reductive carboxylate cycle (CO2 fixation) none EC:1.3.99.1 YPO1111 AGAGTTTGATGCAGTTGTTGTCGGTGCAGG 74 50 GAATGCCTCGCGTAGCTTAGGTTGCATGTTTAC 73 48 255 sdhA succinate dehydrogenase flavoprotein subunit Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Oxidative phosphorylation. Benzoate degradation. Butanoate metabolism. Reductive carboxylate cycle (CO2 fixation) none EC:1.3.99.1 YPO1112 ATGAAGCTCGAGTTTTCAATTTATCGCTATAACCC 70 37 CTATGCGCTACGTTGTAACAGCATAGACTTAA 66 41 717 sdhB succinate dehydrogenase iron-sulfur protein Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Oxidative phosphorylation. Benzoate degradation. Butanoate metabolism. Reductive carboxylate cycle (CO2 fixation) none EC:1.3.99.1 YPO1113 TTGGGAAACCGACATTCAGTGATGC 69 48 GGCCTGATGTGGGAACGGATACAGT 70 56 255 sucA 2-oxoglutarate dehydrogenase E1 component Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Lysine degradation. Tryptophan metabolism none EC:1.2.4.2 YPO1114 ATGAGTAGCGTAGATATTAATGTTCCTGACCTCCC 69 43 TTATACATCAAGTAGCAAGCGAGCAGGATCTTC 69 42 255 sucB dihydrolipoamide succinyltransferase componentof 2-oxoglutarate dehydrogenase complex Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Lysine degradation none EC:2.3.1.61 YPO1115 ATGAATTTACACGAATATCAGGCAAAACAACTGTT 69 31 TTATTTAGCCCCCACTGCCGCTACA 69 52 255 sucC b0728 succinyl-CoA synthetase beta chain Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Propanoate metabolism. C5-Branched dibasic acid metabolism. Reductive carboxylate cycle (CO2 fixation) none EC:6.2.1.5 YPO1116 TTTAATTGATAAAAACACCAAAGTTATTTGTCAGG 66 26 TTACTGCGGTAATACAGCTTTAACAGCATTACCTA 68 37 873 sucD succinyl-CoA synthetase alpha chain Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Propanoate metabolism. C5-Branched dibasic acid metabolism. Reductive carboxylate cycle (CO2 fixation) none EC:6.2.1.5 YPO1117 ATGTTTGATATTGTCGAACTGTCACGGTTACA 69 37 GGCTGTTCAAAATGATAGCGGCCAGTTTTCAG 74 47 255 cydA cytochrome D ubiquinol oxidase subunit I Energy Metabolism Respiration 1.B.7.c Electron transport [33] Oxidative phosphorylation none EC:1.10.3.- YPO1118 TGTTTGATTATGAAGTATTACGATTTATCTGGTGG 66 31 TTAGTACAGTGAATGCTTGTTGTTTTCGATAAATT 66 29 255 cydB cytochrome D ubiquinol oxidase subunit II Energy Metabolism Respiration 1.B.7.c Electron transport [33] Oxidative phosphorylation none EC:1.10.3.- YPO1119 GTGAAGCCAACGCAGCAGCTAAAGC 70 56 TTAGGCGAAAAAGTAGAATAATCCTGTAGCCAAGA 69 37 333 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1120 GTGAGTAATACGTTATTTCGATGGCCGGTAC 69 45 CTACTTAAACTCCGCGACAATAGACTTAGGAAGCG 71 46 402 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1121 ATGAACATTCTGGATTTATTCCTGCAGGC 69 41 TTATTTGCTTTCGGTGCTGGCGAA 70 46 678 tolQ TolQ colicin import protein Other 5.B Colicin-related functions [10] none YPO1122 ATGGCGCGAGTACGTGGTCGTAAG 70 58 TTATATCGGTTGGGTCATTAAGCCCACC 69 46 429 tolR TolR colicin import membrane protein Other 5.B Colicin-related functions [10] none YPO1123 GTGTGGAAATCGAGCGTGGGTAAGG 70 56 TTATTGAGGCTTAAACACAAGCGGAGCA 69 43 255 tolA TolA colicin import membrane protein Other 5.B Colicin-related functions [10] none YPO1124 ATGAAGCAGGCATTTCGAGTAGCGC 70 52 TCACAGATACGGCGACCAGGCAGGAAAT 74 54 255 tolB TolB colicin import protein Other 5.B Colicin-related functions [10] none YPO1125 ATGCAACTGAACAAAGTGCTAAAAGGGCTAA 69 39 TTAGTAAACCAGAACTGCACGACGGTTTTTAGC 70 42 507 pal excC peptidoglycan-associated lipoprotein Pal Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO1126 ATGAACAGTAACTTCAGACGTCACTTAGTGGGTC 69 44 AAGAGCAGATAAACGTTTCTGTGCCTGTTTAGC 70 42 810 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1127 ATGAGCGAAATTTTTGATGTGAATGCG 69 37 TCAGGCATTGCCTTTGACCTGTAACTTC 69 46 255 nadA nicA quinolinate synthetase A Biosynthesis of cofactors; prosthetic groups and carriers 1.G.7 Pyridine nucleotide [6] none YPO1128 ATGGATTTTCTCAGCACAGGCAACATATTG 69 40 TTAACCTTGAGTAGACAGTGGGCGTGAATG 70 47 726 pnuC intergral membrane NMN transport protein PnuC Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO1129 ATGGCTGTATCCACAATTTTCTCGCAAGATA 70 39 TTATTCGTGGTGATGATGACGGTGATGT 69 43 255 none putative cation transport protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO1130 ATGAATTACCAGAATGATGATTTACGG 62 33 TCAATATTGGGCCGTTGGTGG 67 52 aroG "phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive, AroG (pseudogene)" Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" aroG EC:4.1.2.15 YPO1133 ATGGCAGTAACTAAGCTAGTTTTGGTACGACACG 70 44 TTACTTCGCTTTACCCTGGTTAGCAACCG 70 48 753 gpmA gpm phosphoglycerate mutase 1 Energy Metabolism 1.B.1 Glycolysis [12] Glycolysis / Gluconeogenesis none EC:5.4.2.1 YPO1134 ATGCGTCTATTCCCCCTATGGTTGTTATCG 70 47 TTAGGCCGCTTTCTTGAGGCAAGTG 70 52 336 psiF putative starvation-inducible protein Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO1135 TTGCTACTGGGCTACCCGACACC 68 61 TTATAAAGGCAACGCAATAAAGTGATAAACCGTC 69 35 897 galM aldose 1-epimerase (pseudogene) Degradation 1.A.1 Carbon compounds [66] Glycolysis / Gluconeogenesis none EC:5.1.3.3 YPO1137 ATGAGTTTAAAACAACATACCCAGACTATTTTCCG 68 34 TCAGCATAAACCCGCTCCTTGTGAAG 69 50 255 galK galA galactokinase Degradation 1.A.1 Carbon compounds [66] Galactose metabolism none EC:2.7.1.6 YPO1138 ATGACGCATTTTAACCCTGTGGATCATC 69 43 TCATGATTTGGCTCCGGCCTCTT 69 52 255 galT galB galactose-1-phosphate uridylyltransferase Degradation 1.A.1 Carbon compounds [66] Galactose metabolism. Nucleotide sugars metabolism none EC:2.7.7.10 YPO1139 ATGTACGTTCTGGTAACAGGTGGTAGCGG 70 52 TTAATCGGGGTAGCCTTGAGGATTTTT 67 41 255 galE galD UDP-glucose 4-epimerase Degradation 1.A.1 Carbon compounds [66] Galactose metabolism. Nucleotide sugars metabolism none EC:5.1.3.2 YPO1140 ATGTGGGGTGTTCTTGCTACTTCGTTACTGT 69 45 TTAGTGGGGTAAATAGAGTGGATAGGTGAAGAACA 69 40 819 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1142 ATGTCTGAGTTGCAAATATCGCAAGGTTGT 69 40 CTAATGCCGGCCAGTGTCATCTTCAT 69 50 306 modF phrA putative molybdenum transport ATP-bindingprotein modF Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO1143 ATGCAGGCCGAAATTCTTCTTACACTAAAACTTC 70 38 TCAACACAATGTGGCGATAATCACCC 69 46 792 modE modR molybdenum transport protein ModE Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO1144 ATGTTTGAACTATTAAAAAGTCTGGTCTTTGCCGT 69 34 TCAAGAACGAAGGGTATTCCGTTCTTTCGG 72 47 153 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1145 ATGAAGAATCAATACGGTAAAGTGAGTTACTGGGT 68 37 TTAGCGTGGGGTGAATCCATAGTTTTTGA 70 41 780 modA molybdate-binding periplasmic protein precursor Cell processes Transport/binding proteins 4.A.5 Anions [14] none YPO1146 ATGATATTGAGTGAGTATGAATGGCAGGCG 70 43 ATGGGGCCCCCATGCGTT 70 67 696 modB chlJ molybdenum transport system permease proteinModB Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO1147 ATGCTAGAACTGAATTTCAGCCAACAATTGG 69 39 TCAATCTGGTACAGGGCCATTCTGG 69 52 255 modC chlD narD molybdenum transport ATP-binding protein ModC Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO1148 ATGACATATCGCATAATCGCACTGGATCTG 70 43 TCAGGCTAATACATGCTGGCGGATAAC 68 48 822 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1149 ATGAAGCAAGCGGTTTACGTGGCA 70 50 CCCCCGGATACTGACCCACATC 68 64 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1150 ATGACACCTTCTGACTTAGTTTTTGATCAACAGC 69 38 TTAGCTTCCGCGATCTACCACGGC 70 58 255 bioA adenosylmethionine-8-amino-7-oxononanoateaminotransferase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.1 Biotin [8] Biotin metabolism none EC:2.6.1.62 YPO1151 ATGGCAACTTATCATCACTGGACAGTAGGG 69 47 TTAGACCGCCGCATTATAAAACTGGGC 70 48 255 bioB biotin synthase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.1 Biotin [8] Biotin metabolism none EC:2.8.1.6 YPO1152 ATGAGCTGGCAAGATAAAATAGCGCAAGG 70 45 TCAGTGACAGAGGCCATAAAGCACCTC 69 52 255 bioF 8-amino-7-oxononanoate synthase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.1 Biotin [8] Biotin metabolism none EC:2.3.1.47 YPO1153 ATGGCCTCTGTCACTGAGCACGC 70 61 TTAGTCACGATAGATAACCCCATAAACCATATGA 67 35 804 bioC biotin synthesis protein BioC Biosynthesis of cofactors; prosthetic groups and carriers 1.G.1 Biotin [8] none YPO1154 GTGACTAAACGTTGGTTTATCACCGGTACCG 71 48 TCACATGTTGACAGCCTCCCGTTCT 70 52 723 bioD dethiobiotin synthetase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.1 Biotin [8] Biotin metabolism none EC:6.3.3.3 YPO1155 ATGCTAAGTTTAACCGCTGTAAATCAATACTATGG 66 34 TCAGCGGGCTAAATGCTCGCTAATC 69 52 711 none putative amino acid transporter Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1156 TGAGCAAATCATTCAAACTGCATTCTGTG 69 38 GTTGCCGCAGTTGATGAACCTGATC 69 52 255 uvrB excinuclease ABC subunit B Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO1157 ATGAGCGAGCATTTATCTAAAGATCCGCTG 70 43 TCAAGACTGGCCTTTCAACCACTCC 68 52 246 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1158 ATGCGAAATCGCACATTAGCGGATT 69 44 TTACACCGAGTCTGCACCGTTCAACTG 70 52 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1159 ATGGTACAACTCACTGACGCATTTGCG 70 48 TCAGCCGCCAATAAAGGATAAATTTTGC 69 39 255 moaA chlA1 chlA narA bisA molybdenum cofactor biosynthesis protein A Biosynthesis of cofactors; prosthetic groups and carriers 1.G.4 Molybdopterin [9] none YPO1160 ATGACCCAACTGACACACATAAACACCG 69 46 TCATATATCCACCTTGAAATCACCCGATTTC 69 39 480 moaC chlA3 molybdenum cofactor biosynthesis protein C Biosynthesis of cofactors; prosthetic groups and carriers 1.G.4 Molybdopterin [9] none YPO1161 TTTTTGCTCAGGTACGTGAACTGGTTGG 70 46 CCCGGTCACCGGCGGGAA 74 78 246 moaD chlA4 chlM molybdopterin [mpt] converting factor; subunit1 Biosynthesis of cofactors; prosthetic groups and carriers 1.G.4 Molybdopterin [9] none YPO1162 ATGATGGAAAATACGCGTATCCGTGTCG 71 46 TTACCAGCGTTTAGCCGCAATATGGTC 69 48 456 moaE chlA5 molybdopterin [mpt] converting factor; subunit2 Biosynthesis of cofactors; prosthetic groups and carriers 1.G.4 Molybdopterin [9] none YPO1163 ATGGATCGCTATCCACGCTCTAATGGTT 69 46 TTAGCGACGATTACCGAAGATTCGTAATAACATC 69 38 711 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1165 ATTACATCATCATTGGTGCCGGTTCTGCAG 73 47 ATGCCTTACGGGAGATGTACGGGCAGGAGTAT 74 53 255 betA choline dehydrogenase Other 5.F Adaptions and atypical conditions [36] "Glycine, serine and threonine metabolism" none EC:1.1.99.1 YPO1166 ATGTCCCGCTACGGCTTGCAAA 69 55 GCCTAACTCAACCTGAATTGATTTGATTTGCGTGT 73 40 255 betB betaine aldehyde dehydrogenase Other 5.F Adaptions and atypical conditions [36] "Glycine, serine and threonine metabolism" none EC:1.2.1.8 YPO1167 GTGCCAAAAGTAGGAATGCAGCCG 69 54 TCAGCACTTATATTTAATGTTCAATTGCTGCTCAA 69 31 597 betI TetR-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1168 TTCAGACATCGACACAAAACCGCAA 69 44 GTCATGATATTTCCCGGCGCTTCAC 70 52 255 betT high-affinity choline transport protein Other 5.F Adaptions and atypical conditions [36] none YPO1169 TTTTTCCGGTCGTATCAATTTGAAAATG 67 32 TCAAAATAACGCAAGCAACTTATTTAGTGCCG 70 37 894 none putative LysR-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1170 ATGACAACAAGAGTACTTAAAGCGCATTTGCA 70 37 TTACTTGGCTTTAACTAAAATAGCCATCGCGATAA 69 34 882 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1171 ATGACAACAGTAAATTCAAATATAAACGTTGATGC 66 29 TTAACGGAGCGCTTTGCTTTTTAAGAATG 69 38 864 xapA pndA xanthosine phosphorylase Purines; Pyrimidines; nucleosides; nucleotides 1.F.5 Miscellaneous nucleoside/nucleotide reactions [9] none YPO1172 ATGCGAAAAAATATATTCCTCGACG 63 36 TCATCCCTCATTGGGACCCCC 69 62 xapB' xanthosine permease (pseudogene) Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1174 ATGCCACAAGTTAATAACATATCGACA 62 33 TTACGCATAAGCATGACTTTTCG 61 39 930 none hypothetical protein Other 5.I Unknown [1066] none YPO1175 ATGAGTATGCGAGTAATACTGGCACCGATG 69 47 CTAACGATTAATACGCTGAATTGCCAGCG 70 45 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1176 ATGTCCACTCCCGATAATTTATTTAAGCTGACAAA 69 34 TTATTCTGATACCTGCGCTAAACGGCC 69 48 255 pbpG penicillin-binding protein 7 precursor Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO1177 AAAAATCCAGCTCTTGCTGACTCAATTACAGC 70 41 CTTACGTTTTGAGGTTTTACCAATCCCCGGATTAA 72 40 255 dld D-lactate dehydrogenase Energy Metabolism Respiration 1.B.7.a Aerobic [20] Pyruvate metabolism none EC:1.1.1.28 YPO1178 ATGAGTGAGCATTTTGTTGGGAAATATGAAGTTG 70 35 CTAAAAACCCAATAGTTGCCGATATGAACGAG 69 41 540 cyaB adenylate cyclase 2 Central intermediary metabolism 1.C.3 Sugar nucleotides [11] Purine metabolism none EC:4.6.1.1 YPO1179 ATGGCATATATACCAAAGAATTATTCCCGATTGG 69 35 TTTTTCATTAAAGATTTCAAATTAGCAAATGGGTT 67 23 342 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1180 ATGAAAGAATCTGAGGTACTGGCCGAAGTC 69 47 CTAAATAACGGCTTGGCGCGGG 70 59 255 none hypothetical protein Other 5.I Unknown [1066] none YPO1181 ATGGGCATACTATCTTGGATTATTTTTGGCCTT 69 36 CTAGCTTCTTAACTTCCGATAAATAAACAGAACAA 65 31 249 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1182 ATGGCTCATGATTACAGGCAATCTGAGAGA 70 43 TTAATGTAAAAGCTCGGCTGACTCATCACTATAAA 68 34 873 none putative ABC transport ATP-binding subunit Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO1183 ATGAAGAAAATATTATGCCTTACCTCATTGTTGGC 69 34 TTAACGGTCGCCTTTGGTTAATTCACG 69 44 255 none putative substrate-binding periplasmic transportprotein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO1184 TTGAAGACTGACTTTAACCACTATTATCAGCAGA 66 35 TCATGCTCCTTCCACAACTCGTTTGC 71 50 861 none putative ABC transport membrane permease Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO1185 ATGTTGACTCATCATCTGACAACAGAACAGATATT 68 34 TTATGGCTGATATAATGCAATCTCTTCACCAAGA 69 35 882 none putative ABC transport membrane permease Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO1186 ATGATCAACAACGATGTGCTCCGC 69 50 TTTTTAGCGCCACGAATACGCAGTGT 69 46 474 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1187 AACGTCGTAACTTGATTAAAGTTTTTGCGCTCTCG 73 40 CTACTGGCTGCTTTTCACCGGATGATC 70 52 255 none putative substrate-binding periplasmic transportprotein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1188 ATAGGGCAATCAATTATGTGTTCAGGCCGATGATA 73 40 GCAAACAGACCCTGCGGTCGTTTTTGAATA 74 47 255 none putative Branched-chain amino acid transportsystem; permease component Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1189 ATGAATCAACCACTGACGGTAACCTTAACG 69 43 TCATTGGTCTTTCCCCCTGCGC 71 59 255 none putative Branched-chain amino acid transportsystem; permease component Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1190 ATGAGCCGGTTTCAACTGACGGAG 69 54 TCAACGCCCTAAATACACCTCAATCACCT 69 45 837 none putative ABC transport ATP-binding subunit Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1191 ATGCTGCAAGTGAATGAGCTTGATCAATATTATG 70 35 CTAAATCGCCACCAAACGGCGA 70 55 699 none putative ABC transport ATP-binding subunit Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1192 GTGACTAGTTTGCCAATAACTGCTAAG 61 41 TTAACACCAGAAATAGAACGGCTG 62 42 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1193 CCATGGCTATGCCATGATCGACCTGAT 72 52 TTATCTCTCCTTAACCAAAGACTGCAACAACAACC 70 40 255 none putative pyridoxal-dependent decarboxylase Degradation 1.A.2 Amino acids [23] none YPO1194 ATGAACTCAGATTTTCTGGTTACACCGCAA 69 40 TCACGCCAGAGGCGTTGCG 71 68 855 none putative sulfurtransferase Other 5.I Unknown [1066] none YPO1195 GTGACGATTAAAGCGGCAGCAGAACA 70 50 TTTTAATAAATCCGTTATCTTTTAGATAATTGGCA 65 23 321 none putative substrate-binding transport protein(pseudogene) Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1197 AAAAACCGGGTTTTGCTAACACTGTCTATTTTATT 68 31 TCATCGACGTGAAATATCCATAAATATGACAATGA 69 31 255 none putative ABC transport integral membranesubunit Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1198 ATGATTCAATTCCATCAAGTCAGTAAGTATTTTGC 67 31 TCATACTCTTTCCTTATTCGCAACCAAATCAGC 70 39 255 none putative ABC transport ATP-binding subunit Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1199 ATGAAGCCAGCAGAAACCAAACCTGATAA 69 41 TTAATCCGTTCGGGGAGCAGAAAGAG 69 50 837 none putative ABC transport integral membranesubunit Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1200 ATGTCTACAGATGATCAGAAGGTAGGGTTAATTCC 68 40 CGTTCTTAACAGGTGCATCGAGTGGGAATG 73 50 255 none putative amino acid permease Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1201 TCCCATAGTCAGGCATTTGCATTGC 69 48 AAAATGCTGGCCCCATTTGGTGATA 69 44 255 none putative amino acid decarboxylase Degradation 1.A.2 Amino acids [23] Glutamate metabolism. Arginine and proline metabolism none EC:4.1.1.19 YPO1203 ATGCTGAAGCAAAATCGCCGTAACCT 70 46 TTAACGGCGTGCGAACAAAAATTTTC 69 38 891 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1205 ATGAAACGTAATATTCTGGCAATCCTTATACCGAC 69 37 TTAGAACTGATACACCAGACCAAGTGCTACAACG 70 44 255 ompC2 outer membrane protein C2 Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO1206 TTTGGCTATTGAAGCACCAACGGGT 70 48 TTAGCAGGCCCTTTCACCGCTGTAG 70 56 255 dinG rarB putative ATP-dependent helicase DinG Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO1207 ATGATGAGCAAGAAGAAAGGATTAACCACCG 70 42 TTTTTCACACCGGCGCCATAAGC 70 52 255 katA catalase Cell processes 4.G Detoxification [10] Tryptophan metabolism. Methane metabolism none EC:1.11.1.6 YPO1208 ATGAATAAGCATTTAGTGGCGTGTGCAGC 70 45 TCAGAAGTTCAGACCAGCGCCGATA 70 52 543 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1209 GTGAAGAATCGCACTCTGGGCAGTATATTTATC 69 42 TCACCCTACCGCAGGTAATGCGC 71 61 255 tyrP tyrosine-specific transport protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1210 ATGATCAGAGTCGAGATGTTGAGTACCGGA 70 47 TTACAAAATCTCAATAATATCCAACCAACCATGCT 69 31 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1211 AAATGCTCAATCATATTAGCCAGTGTATTACTAGC 65 34 CTATTTGACCTGCGCACTTCTGATATCTTCG 70 45 510 eco eti putative ecotin precursor Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO1212 GTGAAAGCGATTGTAACCTTAAATACCACCGG 70 44 CTAAAACTCGATTTCAATGTTGCCCTTGG 69 41 258 none putative iron-sulphur binding protein Other 5.I Unknown [1066] none YPO1213 ATGGCCTATACCACTTTTTCACAAAATAAAAATAA 66 26 TTACAGCTCGAAATCACTCAGGTCGTCAG 70 48 255 nrdB ftsB ribonucleoside-diphosphate reductase 1 betachain Purines; Pyrimidines; nucleosides; nucleotides 1.F.3 2'-deoxyribonucleotide biosynthesis [8] Purine metabolism. Pyrimidine metabolism none EC:1.17.4.1 YPO1214 AAAATCCACAGGGTCATCGACTGGG 70 52 TGCATCAAACCAACCAGTTGCAGGT 70 48 255 nrdA dnaF ribonucleoside-diphosphate reductase 1 alphachain Purines; Pyrimidines; nucleosides; nucleotides 1.F.3 2'-deoxyribonucleotide biosynthesis [8] Purine metabolism. Pyrimidine metabolism none EC:1.17.4.1 YPO1215 ATGCGAGCCAAAACGACAAGCC 69 55 CTATTCGCTGTCCCGTTGTGTATGCAC 70 52 729 ubiG pufX 3-demethylubiquinone-9 3-methyltransferase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] Ubiquinone biosynthesis none EC:2.1.1.64 YPO1216 ATTGTCGGACGTGCGTTACCAGATG 69 52 CTTCATTGCTGCCATCCGTCAGATC 69 52 255 gyrA parD nalA hisW DNA gyrase subunit A Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO1217 TGACTAATGAAGATCGGGAACGTA 62 42 TTCACATCGGTCAATACCATATCC 62 42 ~1400 rcsC two component sensor kinase/response regulator protein RcsC Broad regulatory functions 2 Broad regulatory functions [235] none YPO1218 ATGAACAACCTTAATGTAATTATTGCTGATGACCA 68 31 TTACAGTTCTTTATCCACTTGGCTAATTGTCACAG 68 37 654 rcsB probable two component response regulatorcomponent B Broad regulatory functions 2 Broad regulatory functions [235] none YPO1219 AACAATTCGTCTACCCACTCAGCGGCTAACATTAC 73 46 GTCGGCCAATGCTTGGCTAAGGAAAGGATAATTAA 74 43 255 none putative two component sensor kinase(pseudogene) Broad regulatory functions 2 Broad regulatory functions [235] none YPO1221 ATGAGCACCAAAATACACCAACAAGCAGTAC 69 42 TTAGCGCGTGACGGCTCTGG 69 65 255 micF putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1222 ATGAAACTTCGAGTTCTTTCATTCATTATTCCGG 70 35 TTAGAACTGATAGACCATACCTACTGCGACAA 66 41 255 ompC meoA par outer membrane protein C; porin Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO1224 ATGGATAAAAGATTGTTGAAACGTCTCTCTGCC 70 39 GCTGAATTTAGTCAGTTGGCTTCGTGTGAC 70 47 255 ampH putative penicillin-binding protein Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO1226 ACAAGGCATACGTTGGCTTACGGGAGTGCTAAC 74 52 TTAACTTTCAGTAACCGGTTTGGGTATGACGGTTG 73 43 255 none putative transport protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1228 ATGGCGAAGAAAAACCCCTATTATGATGC 69 41 CTATTCCAGTATGATCCGTGCACCTATTTTAATTG 69 37 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1229 GTATTATCATCGTTGCGGGTTCGCTCGC 74 54 GTATCAGTTAAATCAGCGGCCTGAGCTTGTAAGGC 74 49 255 tsr2 cheD2 putative methyl-accepting chemotaxis protein Cell processes 4.D Chemotaxis and mobility [86] none YPO1231 AAAAAGGGGCCGGCGCACT 70 63 TTAAAATTTGTACTGAAAACCCACGGTAAGGGTT 69 35 255 pla2 putative outer membrane-associated protease Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO1232 ATGCGTGTTGAATTAATTTATGACAAGCGGA 70 35 TTAGAATTCATTGTTCAACCATTCATCGGCT 70 35 243 msgA dinI putative stress response protein Other 5.F Adaptions and atypical conditions [36] none YPO1233 ATGAAAAAGAAGCCATTAACGCCCGA 69 42 CTAATCTATTTGCAACCAACGGGCATCA 69 43 723 none putative prophage repressor protein none YPO1234 ATGAGTTCATTAAACGGTCCGC 62 45 TCAGGCTGAGGCATTCTCTT 60 50 480 none probable phage antitermination protein Q none YPO1235 TCTATTCAACTTGGCGTGATTGCAGATGACTTTAC 72 40 TCACTCTGTATACTCCTGTGCTGCCACAAA 70 47 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1236 CCCCCGTTTTCAGAGCCGC 69 68 TCAGAAAATAGAGCCGTGCCGTATCTTCA 70 45 612 none putative class II aldolase-family protein Other 5.I Unknown [1066] none YPO1237 ATGATGATGATCCCTGAACAGCGTCG 71 50 TTAGATTGGCTGCGAATTTGAGCATG 68 42 816 none putative transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1238 ATGCTCAAATTCGCAGCCAATCTAACG 70 44 TTTTTCCCAACCATCCCAACCCTG 70 50 795 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1239 ATGTATGAGCAAAGCCAATTTCC 61 39 TCACCTCCGTTTAATAATGGCTT 61 39 291 none putative bacteriophage protein none YPO1240 ATGACATTTATTGATGTCAGGCGT 62 38 TTACTCCGAGAGGGTTATTGCG 63 50 none putative ATP-binding protein Other 5.I Unknown [1066] none YPO1241 ATGTTCGTAAAACCAATGGCC 61 43 TCATAGTTTAGTACTCTCCGTTGTTAACTCT 61 35 195 none putative bacteriophage protein none YPO1242 ATGACCATTCCTTTCACAAATATTCCCAGC 69 40 GCAGGCGGAATTGATTGAGAACAGCAAAGATA 74 44 255 none putative bacteriophage tail sheath protein none YPO1243 ATGAGCGATACTTCAAACCGCCTGG 69 52 TCAGTTCTCCGTCACCGAGCCG 71 64 369 none hypothetical protein Other 5.I Unknown [1066] none YPO1244 ATGGCAGAACTGGAACGCAGTAAAACG 70 48 TTATTTCGCGCCATCGTCCCC 70 57 300 none hypothetical protein Other 5.I Unknown [1066] none YPO1245 ATGACTGAGATATTTGATTTTGACCTGGCTATCG 70 38 ACCGAGTTCCATGGCGTGGGCAAT 74 58 255 none putative bacteriophage coat protein none YPO1246 ATGTCACTCATTGGCAACACATTATCAGC 68 41 ATAGATTCAGCGCCTTAAATCGGATGGGCATAA 74 42 255 none putative bacteriophage protein none YPO1247 ATGAATGATGACTTAACACTGGAGGTGGGTG 70 45 ATTTGATTTTATAGGGCTTAACGTCAAATGCAGC 70 35 255 none putative bacteriophage tail protein none YPO1248 ATGAGTGATGTCAGTGGGCAAATCTCAAC 69 45 TCATCGCACCACCTTAGCGGG 69 62 597 none putative bacteriophage (baseplate assembly)protein none YPO1249 ATGACAACCGATATTAAGACCGTTTGGGA 69 41 TTACTCCTCCCATACCCATGAAAATTTAATTGATG 70 34 456 none putative bacteriophage protein GP46 none YPO1250 ATGCCATTTAATCGACCCACGTTAAGTGA 70 41 TCATAGGTAACTCACTGTACCCCGAACGG 70 52 255 none putative bacteriophage protein none YPO1250a ATGAGCCGCTATTCCGTAAGT 60 48 TCATGCTATCGATCTCACCAATC 61 43 261 none putative bacteriophage protein none YPO1251 ATGGGAAGCGACACTGGGCTTG 69 59 TCAACTAAGCAGGGTATAGCCAAACTTCAGAATAG 68 40 405 none putative bacteriophage protein none YPO1252 AAAAATTGGAGATATTCCTAATACACGCGCC 69 39 TTATGCCGCTCGCACAATATAGTTAAAAGCAATAT 70 34 780 stf putative bacteriophage tail fiber protein none YPO1253 ATGTTTACTTATAAAGAAATATCGACGCTGAACGA 67 31 TTATTTGGTGTTTTTATTCATTAGCTGAGGTAATT 65 26 741 none putative LacI-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1254 ATGAGCTATCAACAGTTACCGAAAGATTTTT 65 32 TTAAAGAACTTCACCATTGCTGGCAATAACTTTTT 70 31 255 bglA 6-phospho-beta-glucosidase Degradation 1.A.1 Carbon compounds [66] Glycolysis / Gluconeogenesis none EC:3.2.1.86 YPO1255 ATGACATCAGCAATTAAAATAACTGTTG 61 29 TTATGAGGGGAGGCTGTTAACTAA 60 42 363 none hypothetical protein Other 5.I Unknown [1066] none YPO1257 ATGACCCAGCTTAATAACATTGTGG 62 40 CTACTGGACATTAGCTTCACGGA 61 48 489 none hypothetical protein Other 5.I Unknown [1066] none YPO1258 ATGAGCTTCAACCTGCCCGGAA 69 55 TTATGGATAAATCACACCTTTCGGAACAGGC 71 42 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1259 ATGCCACAGCATCGGCATGTAGC 70 57 TTACGCTGATAGCCTCGCCCGC 71 64 522 none putative bacteriophage protein (partial) none YPO1260 CAGCTGGGGGCACTGGTTCGCCTTATTTAATAT 74 48 GAGGTTTCTCATCTTTGACCTCATGACCTTGCTG 74 47 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1261 ATGCCACAATCATCCCGTTATAGTGACG 70 46 TTAATGGGCTTTATCTTCACGTACCGAAGC 69 43 228 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1262 ATGAGTCTGGATATTGACCAGATAGCCTTACATCA 69 40 TTACTTACTGCCAGCACGGCGCT 69 57 255 none putative nucleoid-associated protein Other 5.I Unknown [1066] none YPO1264 ATGACCACTATCAATGTAGAAGTACGTAACGACCA 69 40 TTAAACGCGAACGAAGTCGATATGAGTCAG 70 43 285 rplY 50S ribosomal protein L25 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO1265 GTCGATGCCACGGTGGCTTATTTTCGA 74 52 TCAGGCAAGGGCATCGGCC 71 68 255 none putative DEAD box helicase family protein Other 5.I Unknown [1066] none YPO1266 ATGCGATTGGACAAGTTTTTATCTCAGCAATT 69 34 TTACAAGTGTGGGGCACCCACG 69 59 708 rsuA ribosomal small subunit pseudouridine synthaseA Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] Pyrimidine metabolism none EC:4.2.1.70 YPO1267 AAAAACCGGACATCCCACATTGGTTT 69 42 TTATGACACGGTTTTATGACTTGGGCGA 70 43 255 bcr bicA bicR sur suxA probable drug resistance translocator protein Other 5.D Drug/analogue sensitivity [28] none YPO1269 GTGAATAATATTCAACTTTCGGTAGTACATCGCCT 68 37 TCAGAAGGGGTATTCTGCCGTTAGCG 70 54 345 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1270 ACCACTATTGGATATCCAAAACCTCAGTGTTGCGT 73 43 TCTAATAATTGCTGAGTATATAGTTGTTTTGGTGC 65 31 255 none putative ABC transporter ATP-binding subunit Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1271 ATGATGATGAGACTAAGTGCAATTAATCAGGCC 69 39 TCAGTACACCTTACTTGGGTCAAAGGCGT 69 48 255 none putative ABC transporter integral membranesubunit Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1272 GTGGGCGCATATCTATTACGGCGACTA 70 52 TTATTGGCGGCCCTCAAAATCAATACG 71 44 255 none putative ABC transporter integral membranesubunit Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1273 AACCATTAAAGAGGGCGTTTCTTTTGCCATATTGG 74 40 AGCTATCAAACCCTAGCGAATAGGTGGGACGAA 73 48 255 none putative substrate-binding transport protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1274 TTGTCATTACTGTATCGCAGCAGTGAAAATAAATT 68 31 TTAAGCCAGTAAGTTTTTGTTACTCATCTTTTCA 65 29 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1275 ATGGTCAAGTCTCAACCTATTCTGAGATATATTCT 65 34 CTAGCTGCTCGAACTGCTACTTAGCACTCG 69 53 585 spr putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1276 ATGACTCGTCGTAATTTACCGACAATATTGCTC 69 39 TTAAGGATGTTTAGCGCCAGGCAGATG 70 48 702 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1277 ATGACAAAGACCAATTTAATTACCGGATTTTTAGG 68 31 TCATACCCCGTTACGTAAACGAATTTTTAATAAA 67 29 255 none putative cobalamin synthesis protein Other 5.I Unknown [1066] none YPO1278 ATGAGCAACTACCGTGCACTG 61 52 TTAGAGGTAGGTAACAGTTAGGACTCCG 62 46 327 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1279 ATGCGGTTATATCAGGAAGTGGGCAGC 71 52 TTACTCTTCAATCTGATATGGCGCAGACTCA 69 42 744 none putative transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1280 CAACAGCGCCCTTCCCTCAACCGTAC 74 62 CTGTTCGGCTAAGCGGCGTACTGTCTCTTT 73 53 255 none putative D-mannonate oxidoreductase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions none EC:1.1.1.57 YPO1283 ATGGAACAAACATGGCGTTGGTATGG 70 46 CTACTGCTTCAGCTCGGGGAAAAATGTC 70 50 255 uxuA mannonate dehydratase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions none EC:4.2.1.8 YPO1284 ATGGCAAAAGCTAACGAAATAAAACGTGGTATG 70 36 TTAGTCAGCGCGGCCCATATAGCG 71 58 573 none putative elongation factor P Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO1285 ATGTCGATGGCCTTATCCCAACCG 70 54 CTATTGATAAACCGGCAATAGGCCGAAC 69 46 255 mtr putative tryptophan-specific transport protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1286 ATGGACTGTCGCTCAGATTGCGG 69 57 TTAAGGCGCAGTCACCGCTTCC 69 59 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1287 ATGAATGACCACAAAAAGCGGCCTG 70 48 CAGATGCTGGTATATCCCGCATCGGC 73 58 816 none putative short chain oxidoreductase Other 5.I Unknown [1066] none YPO1288 ATGAGATTGGTCGTCACCGATCAGG 69 52 TTAAGTCAGTGGGCAGCGCAGTG 68 57 255 none putative D-isomer specific 2-hydroxyaciddehydrogenase family protein Other 5.I Unknown [1066] "Glycine, serine and threonine metabolism" none EC:1.1.1.95 YPO1289 ATGGCGGATTTTCTAGAGGACCACCC 70 54 CCCCCGCTTAGTAAGGTTACGCATCA 70 54 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1290 AAAAATAATGCACTCTTCAAGTCGATTACCGC 69 37 TTAGTCCCCGATACCGTGGTACAAGC 68 54 255 none putative aldehyde dehydrogenase Degradation 1.A.1 Carbon compounds [66] Glutamate metabolism. Tyrosine metabolism. Butanoate metabolism none EC:1.2.1.16 YPO1291 ATGCAGGCGCTTTTGGGCATT 69 52 CTACATAAAGGTGGGGTCGCCAAGTTCT 69 50 255 none putative carbohydrate kinase Central intermediary metabolism 1.C Central intermediary metabolism [63] Pentose and glucuronate interconversions none EC:2.7.1.17 YPO1292 ATGAGCAATCAACAAAATGACGCCAAG 69 41 TTATCGCAGTTGAACGTAGGAGGAACCG 71 50 711 rpiA putative ribose 5-phosphate isomerase Energy Metabolism Pentose phosphate pathway 1.B.5.b Non-oxidative branch [4] Pentose phosphate pathway. Carbon fixation none EC:5.3.1.6 YPO1293 ATGACAAAAGCAACGCAAGCGGG 71 52 TCAGGTATAGGGGATGCCCCAAGTCTT 69 52 255 none putative periplasmic carbohydrate-bindingtransport protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1294 ATGCTCAATATGGCCTTACACATAACATGGTTTAC 69 37 CAGACGTTCGGCGGTGATGTCATCTC 73 58 255 none putative ABC transport ATP-binding subunit Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1295 ATGGATAAGGCAACCGAGACCCG 69 57 CTATCCGAAGTAACGGATCCGGAAAGC 69 52 255 none putative ABC transport integral membranesubunit Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1296 ATGTCTGTTACGGTTGGCGTTGGG 69 54 CTAATCTAACGTGTTGCTTATTAAACCCACGGG 70 42 456 none putative Mut family protein Other 5.I Unknown [1066] none YPO1298 ATGTTTCAGCTATCTACGCAAGACATTCATCTG 69 39 TCATGCTGCCCCCTCGCC 70 72 255 fruB fruF fpr Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] Fructose and mannose metabolism none EC:2.7.1.69 YPO1299 ATGAGCAGAAGAGTTGCGACTATCACACTGA 70 45 TTAATTAAAAGGTTTCAAGTCTACTTTTGCCATCA 67 29 255 fruK fpk 1-phosphofructokinase Energy Metabolism 1.B.1 Glycolysis [12] Fructose and mannose metabolism none EC:2.7.1.56 YPO1300 AGTCTATGTAGGGGACGTGGAAAA 62 46 CCAAATATAACAGCACTGGATGGA 62 42 ~1400 "fruA, ptsF" "PTS system, fructose-specific IIBC component" Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] Fructose and mannose metabolism fruAptsF EC:2.7.1.69 YPO1301 ATGAGTCACTGTGTTGTTTTAAATAAATTAGA 61 25 TCATTGCTGTTTGCATTCCG 63 45 645 psaE putative regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1302 ATGAAAGCAAAATCACTTACTCTCATATC 61 31 TTAACTAACGTCATGATAGGACGTATGG 63 39 489 psaF putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1303 ATGAAAATGAAATGTTTTGCGAAAAATGCG 70 30 TTAAAATACATACTCTTCAACACGCCCCGTG 70 42 477 psaA pH 6 antigen precursor (antigen 4) (adhesin) Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO1304 ATCACATCAATAGTCATATTCATGGTGTCTTTACC 67 34 TTACTGGACTGTGCTTTTAAATTCCCGGC 70 45 822 psaB chaperone protein PsaB precursor Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO1305 GGGCAATGAATTACCGGGCACCTAT 70 52 CGTGCTCCTGATAAGGAGAGAGGCC 69 60 255 psaC outer membrane usher protein PsaC precursor Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO1306 ATGAAATTTGTCGGTGCACATGTCAGC 70 44 TTACAACGAGGGCTCAATCTCTGCCTG 70 52 858 nfo endonuclease IV Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO1307 ATGGCGACTTCTCAGACAAAAGAACTCCC 70 48 TTACACAAGTGCAATATGTTGCACAAATAAGTTGA 69 31 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1308 ATGCATATAACCTTGCGTCAACTTGAAGTCTTTAC 69 37 TTACTCTTCTTCCTGACAATAACTAAGAAAGCGCA 69 37 873 none putative LysR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1309 ATGACTCAGCAAAATACTAAAATCCCAGCGC 70 42 CTCATCACGCCATTTTGGGAATTCCATCTCTT 74 44 255 lysP cadR putative lysine-specific permease Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1310 GTGAAATGTGTTTCACTGAAAATGGCTAAAGG 69 37 TCAATCCAACTCTCTTTTTGCTTCAATCCAATA 69 33 255 none putative periplasmic substrate-binding transportprotein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1311 ATGAGTGTAACTACTGAACCCATGACAAAAACGC 70 41 TCATACATTCCCCCTATGGCGCAG 69 54 255 none putative FecCD-family membrane transportprotein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO1312 ATGACTGCGGGTTTACGTATTGAGCGT 69 48 TTACATTGTCGGTTCTGTTACCAATCCATCA 70 39 789 none putative siderophore ABC transporter;ATP-binding subunit Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO1313 ATTAGTTATAGCGGCGGTTATTTCATCGCAAGGGT 73 43 AACAGGTTGTAAACACCGCCCATCAGACG 74 52 255 none putative outer membrane protein Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO1314 ATGCTGACAGTCTGGGGCCGA 70 62 TTAACTCAAACCAATCGCAATCAC 62 38 none putative glutathione S-transferase-family protein Other 5.I Unknown [1066] none YPO1315 ATGGATTTGGCCCTGTTTGATTTAGATGAA 70 37 TTACCAATGATGGATATCCCACTGGTGC 69 46 651 none putative hydrolase Other 5.I Unknown [1066] none YPO1316 ATGGGCCAACAGTTATTAAGTCATCAATCAGTC 69 39 TCAAGAACAAAGGGCATCGGAGTAATACC 69 45 255 none putative iron/ascorbate oxidoreductase familyprotein Other 5.I Unknown [1066] none YPO1317 ATGACTAAAACACCTGTTTCTGGCTTGGTTC 69 42 TCATGGTTGAGTTCCTGCCACCG 70 57 825 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1318 ATGATTAGCATCGAACGGCTGAGTAAAACCTA 70 41 TCATATCAGCTCGGCCCTCACACC 70 58 255 none putative ABC transport ATP-binding subunit Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1319 ATGAAAAATGGCATGAGTTGGCAGGA 70 42 TCAGCGGCGGTGTGCCA 70 71 672 none putative ABC transport integral membranesubunit Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1320 ATGTCCAGCTATGTGATCGGGCAGTC 70 54 CTACCTCAAACGCATCGGCCCAT 70 57 567 dacC D-alanyl-D-alanine carboxypeptidase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO1321 ATGGACACTACGCAAACAAGCACTCTTG 69 46 TTAAAATGGTTTGCCCAGATAAGACAAAATG 67 32 894 sdaC dcrA b2796 serine transporter Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1322 ATGGAAACTCGTCGCGCAGAACG 71 57 TTAACAGTAGATTTTTACACTGTGTTGGGAAAAGA 66 31 765 deoR nucR deoxyribose operon repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO1323 ATGACTACCAATTACGCTCATTATATTGATCACAC 67 34 CTAGTAACCTGATGCGGCGGCTTGT 69 56 672 deoC dra putative deoxyribose-phosphate aldolase Purines; Pyrimidines; nucleosides; nucleotides 1.F.5 Miscellaneous nucleoside/nucleotide reactions [9] none YPO1324 TTTTTCTTCTCCATGATAAACGCAACGC 69 39 CTAACCTCTGACCCACCCTTTACTGATTGGT 70 48 606 none putative permease Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1325 GTGAAGATCAGCAAAACTACCCGACAAGC 70 48 TTATTCAGTACCTTTAATGCGCTGGTAATAGCCG 70 41 771 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1326 GTTATTCGTCGTCTTAGCGTTGGGGTTATGCTTAG 72 46 ATGACAATCAACGAGCCAGCCAAGGTCAGTA 74 48 255 none TrkA; Potassium channel-family protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO1327 ATGTTTGCTGTGATTTTTGGACGTCCTG 70 43 TTACTTATACAGGCTCAAATGTTCTTTGGCGTAGG 70 40 264 grxA glutaredoxin 1 Biosynthesis of cofactors; prosthetic groups and carriers 1.G.10 Thioredoxin [10] none YPO1328 ATGCCCCGGATTGTGATCATTTCA 70 46 TTTTTACTTTTCGCCGCCAGTTTTTCC 69 41 297 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1329 TTGAGAATATCTAAGCCGAGGAAC 60 42 CTACCTCACGATGCTCATAATACG 60 46 120 none hypothetical protein Other 5.I Unknown [1066] none YPO1330 ATGGATTCACTCATCGTCCCTGATTTAGC 69 45 TTAATGAATGATGGGGTAAGAGGTGGCG 70 46 486 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1331 ATGTTCACCCAACGTAAAAAGTGGTTATCGG 70 42 TTATTTACCGCTTTTAACTTTTGTCCAGGCC 69 39 255 potF putrescine-binding periplasmic proteinprecursor Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1332 GTGAATGATGTTATTCCCCGCCCAC 69 52 TTAGCTCCCTAAAACCACGCAACTGTCA 69 46 255 potG putrescine transport ATP-binding protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1333 GTGATACCAGAATCCACGAGTGGGGC 71 58 TCATCTCGCGCCCCCAATATCTTTA 69 48 255 potH putrescine transport system permease protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1334 ATGAATAACTTACCGGAGGTGCGTTCTGTC 70 47 TCAGCTACGAGCAGCTTTACGTAATTCGC 70 48 846 potI putrescine transport system permease protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1335 ATGAGACCGTCCTTTTCATCCTCAGCA 70 48 TTAAACACTCATTTTTGACTGGGGGAAATAGC 69 37 465 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1336 ATGCATTGCGCACAGTATACGGCA 70 50 ACGGAGAGTCAGCAAGGTGAGCACTTCGTAGT 74 53 255 none putative RNA methyltransferase Other 5.I Unknown [1066] none YPO1337 ATGAAAAAATTACTATTGGCAACGTTAT 61 25 TCAATATTGGGCCGTTGGTGG 67 52 artJ arginine-binding periplasmic protein 2 precursor (pseudogene) Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1341 ATGACTGGCAATAACCCATTCC 62 45 TCATTTAACAAATGATAATGAAATTATCACC 62 23 231 none hypothetical protein Other 5.I Unknown [1066] none YPO1342 ATGACAATGAAGAAAGAAATGTCCATGAGATTTGT 69 31 TCACTTGCCGTCTTTATTTCTGGCATTAA 68 38 255 none putative SPFH domain protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1343 TTTTTGGAGTTTATGCCTCTGGTGGGG 70 48 TTATTCTCCCTGCCATTGCTGCATAAA 68 41 255 none putative periplasmic binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1344 ATGATGAACTACACCAGATCATTTTTGGTCCAT 69 36 TCATGCCCGTTTCACCTGTTTAGTCAC 69 48 867 none FecCD transport family protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1345 ATGACGCAACTGACGTTAAAGCACGTC 69 48 TCAACGTATACATATTTTCTCTCCATGAGTAGGT 65 35 786 none putative transport ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1346 ATGTATACGTTGATGAAAGCCGATGTGCTG 70 43 TTATGCATGATGATTAGGTTCCAAAATGATAAGGT 69 31 798 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1347 ATGACCTTATCATTTTGGAACCTAATCATCATGC 69 35 TCATGTCTGGCTCCGCCATTGTT 70 52 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1348 ATGAACCAAGGCGCGTTATTGGCTA 69 48 TCAGGCCGCCTTCTTTTTACTGCGTA 70 50 846 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1349 ATGTTGGAATATATACCCGAGATACTGAAAGGGCT 70 40 TTAATTCCGTCGCTCAAAGGCCAG 69 50 669 artM arginine transport system permease protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1350 ATGAATGAATTTCAACCTTTAGCAAGTGCCG 71 39 TCAGGATGCGCTCCGCTCAA 69 60 717 artQ arginine transport system permease protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1351 AAAAATTAATAATAGCGACCGTCCTCGCCA 70 40 TTTTTATAGATAGTTTGATAGGTGCCATCGGCTTT 69 34 732 artI arginine-binding periplasmic protein 1precursor Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1352 ATGCCGTGGAAGTTACCATTCCCC 69 54 TCAATGTGACAGATAGCTGGCAAAAGCTTC 70 43 780 artP arginine transport ATP-binding protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1353 ATGCAACCCACTCATACGCTAACAAGGTTAA 69 42 TTTTAATTTTACCTGATTGAAGGTTGAGAATATGG 66 29 561 none putative chorismate mutase Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO1354 ATGAAAAAGAAAAATATTGCCCTCATCCTCCC 70 37 TTAGTGATTACCCAACAATTGGCGCAG 69 44 576 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1355 ATGAAGGTATTGGTTACCGGCGCAAC 70 50 TTAGCCGCGAAACTTACCGTGTTCTTTC 70 46 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1356 ATGACACCACAACGGATATTAGTATTAGGTGCC 69 42 TCATTGCTTTGAGCCCGCGCTATTTT 72 46 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1357 ATGATGAAATCTATTTTTCTAGCCAATGAGAAGAC 66 31 TCATGAATGTTGCTCGGCAATAAATTCAC 69 38 255 ltaA L-allo-threonine aldolase Amino acid biosynthesis 1.D.3 Serine family [8] "Glycine, serine and threonine metabolism" none EC:4.1.2.- YPO1358 CAAACTGTGGCAACACTGATCGCTAAAACGTT 73 44 TTAGCGTAACCAGTTAGTTTTTGCCAGCTCGAT 71 42 255 poxB pyruvate dehydrogenase [cytochrome] Energy Metabolism 1.B.2 Pyruvate dehydrogenase [4] Pyruvate metabolism none cytochrome YPO1359 ATGACCGATTTTATTCCAACCGATTCCC 70 43 TCACGCCAATTGGACATCCCC 69 57 255 hcr putative oxidoreductase Other 5.I Unknown [1066] none YPO1360 CAGGTAACGGCTGCTCTTACGCGCAG 73 62 CCTGTTCTACGGTGGTTATTGGCTGCATACCAAAT 74 46 255 hcp putative prismane protein homologue Other 5.I Unknown [1066] none YPO1361 GTGTATTCAGGATTGCTGATCATTCTTTTGCC 70 41 TTAGGAAAAGAAAGCCATTAATATGGGTGCC 69 39 897 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1362 GTATTTCATTGAACCTTGACGATAATACGTTGCTG 70 37 CTATTCATCAGCCCGGCCTCGG 70 64 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1363 ATGCGAGTCATCAGTGATAGACAATTAAAATCTGA 69 34 TCACATAAAATGTGCGGCTAACCCC 68 48 255 none putative virulence factor Cell processes 4.I Pathogenicity [38] none YPO1364 ATGCAACTCAGTAGAGGTCAGCGCC 68 56 TTATGCATCCCCCGTGCCACC 71 62 255 none putative HlyD family secretion protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1365 GATGTGTTGCAGGATGTCTCATTGACCATCAAT 73 42 GGCAGGTAAATAGCCAAACACCACGCCAATTA 74 47 255 none putative ABC transporter ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1366 ATGGAGACGGGTACTGTTAAATGGTTCAACA 70 42 TCAGGCCAGTATAGCGAGTTCCGG 69 58 264 cspD cspH cold shock-like protein Other 5.F Adaptions and atypical conditions [36] none YPO1367 TGTATAAAGTGATACTTAACAACGACGATTACACA 65 31 TCAGGCTTTTTCCAGCGTACAAAGCA 70 46 243 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1368 CTGTACGGTTGACCTGGTGGCGTTA 69 56 CAGATTCTCCTGAATCACCCGGGTC 69 56 255 clpA lopD ATP-dependent Clp protease ATP-binding subunit Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO1370 ATGGCCAAAGAAGACAATATTGAAATGCAG 69 37 TTAACGGCTACGGAAGACAATGCGG 70 52 219 infA translation initiation factor IF-1 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO1371 ATGCGCGTCACACAGCTCTCATC 69 57 TTACTGCATCGCGGATGAAAAATTCAAC 69 39 711 aat putative leucyl/phenylalanyl-tRNA-proteintransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] none YPO1372 TGGCGCTGTATCGCCGTCATTGGT 74 58 GATCACCTTGTTCAACAATTTTACCGCCATCCAT 74 41 255 cydC mdrA mdrH surB transport ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1373 AGACAAGGCAGTATGAGTTGATTCGTTGGCTGAAA 74 43 AATGAACCAGCAGACTGGCTAAGGGTGGAGTAATC 74 49 255 cydD htrD transport ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1374 ATGAGCACGGCTAAACATAGCAAATTGATTATTTT 69 31 TTATTTATCGTTTGCCAACCCGTCCAG 69 44 255 trxB thioredoxin reductase Central intermediary metabolism 1.C Central intermediary metabolism [63] Pyrimidine metabolism none EC:1.6.4.5 YPO1375 ATGATAGATAATAAGAAACGCCCGGGGAAAG 69 42 TTACCGAGTTTTAATAACCAAGCGGTTACTCTGC 70 41 495 lrp alsB livR ihb oppI leucine-responsive regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1376 TCTCATTCCCCATTCGATTTCTCGG 69 48 CTCGCTCGTTGTAGCCTGCCAAATT 70 52 255 ftsK putative cell division protein Cell processes 4.C Cell division [24] none YPO1377 ATGAAAAGACTGCTTGTTGCTTGCTGTTTTCTAT 70 35 CTACCGCTGATCATCCAGCGTCAC 69 58 609 lolA lplA putative outer-membrane lipoproteins carrierprotein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO1378 ATGTCCCTCGATTTTTCCCAAAATGAGTTT 70 37 CTAGCGGTAGCGTTTTATCGGGCTATTTTTATC 69 42 255 none putative ATPase protein Other 5.I Unknown [1066] none YPO1379 GATCCCAATATGCTGCGCAATGAGCTAGA 72 48 TTAACCAATATATTCCAAGCCACCCATATATGGAC 69 37 255 serS seryl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] "Glycine, serine and threonine metabolism. Aminoacyl-tRNA biosynthesis" none EC:6.1.1.11 YPO1380 ATGTCCGCATATTCTCGCCCCG 71 59 TTATACCGCAGCATAAGGCGTTTGTTG 69 44 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1381 GTGCTTGGTCGTATTCATTCATTCGAATCC 71 43 TCAGTAGATGACTTTGTGGCCATAGCCTTC 69 47 735 pflA act pyruvate formate-lyase 1 activating enzyme Energy Metabolism Respiration 1.B.7.b Anaerobic [24] none YPO1382 ATGAATGAAAATTGGAATTGGTCTTTAGTAGACAA 67 29 TTATTTTGAACCGTATGCTTTCATCTTATCGAATG 69 31 675 none hypothetical protein Other 5.I Unknown [1066] none YPO1383 GGCACGGTTTTACCAAGGGTGATTG 69 52 TTTACCCAGTGCGTTTGGCACGATA 69 48 255 pflB pfl formate acetyltransferase 1 Energy Metabolism Respiration 1.B.7.b Anaerobic [24] Pyruvate metabolism. Butanoate metabolism. none EC:2.3.1.54 YPO1384 GTGAAAGCTGACAACCCCTTCGATG 68 52 TTAATGTTGCTGGTCACCGCGC 69 55 858 focA putative formate transporter 1 Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1385 GCTGGAAGACTCTATCTCCCGTTTTCAGCAAAAA 73 44 CAACTTAGCATAAGCGCCGAGTAAAGCCTGATGAG 74 49 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1386 ATGAAATATATAAAGCTAACGGTACTCGCCGGAA 69 38 TCAATATGTGTGGAATAGTTTTTGAATTTCTTGTG 67 29 255 ansB putative L-asparaginase II precursor Degradation 1.A.2 Amino acids [23] Alanine and aspartate metabolism. Cyanoamino acid metabolism. Nitrogen metabolism none EC:3.5.1.1 YPO1387 GTGTTTGCGGATGTCAATATCGGTGATT 70 43 TTAATTAATGCCAAAAGCAAAACCCGCTG 70 38 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1388 GATGCAATGCATATATATCGCCACTTGGTTAATCG 72 40 GTAAGTCATCGTTGTATTCATTGTGATTCGTTGAT 69 34 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1389 ATGACACAGGTTTATAATTTTAGCGCTGGTCC 69 41 TCAGCCATGGCGGCGTTC 69 67 255 serC phosphoserine aminotransferase Amino acid biosynthesis 1.D.3 Serine family [8] "Glycine, serine and threonine metabolism. Vitamin B6 metabolism" none EC:2.6.1.52 YPO1390 ATGCTGGAATCCCTGACCTTACAACCC 70 52 AGTTGGCTCAGACGCGCAAACTGTTCAA 74 50 255 aroA 3-phosphoshikimate 1-carboxyvinyltransferase Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:2.5.1.19 YPO1391 ATGACGGCGATAGCCCCGGT 70 65 TTTTTCAACGGCAAGGCTAAAATTCGTT 69 36 693 cmk mssA cytidylate kinase Purines; Pyrimidines; nucleosides; nucleotides 1.F.2 Pyrimidine ribonucleotide biosynthesis [8] Pyrimidine metabolism none EC:2.7.4.14 YPO1392 CCTGAAAACAATTGAAACACGTCCGGGCTCTAT 74 45 ACTTTCTTCTGGCTTGGTGTTAACCGTAGCAATAG 71 43 255 rpsA ssyF 30S ribosomal protein S1 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO1393 ATGACCAAGTCTGAACTTATTGAAAGACTTGCTG 69 38 TTAGCCGTAGATATTAGCGCGATCTCGC 70 50 285 ihfB himD hip integration host factor beta-subunit Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO1394 ATCTCTTTCATGGGATGACGGCCAG 70 52 CTAACGCCAAACCGCTGGTGATACC 70 56 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1395 CCGACGATCTCCCCTTATAAGGCCGG 73 62 AAACTGCATACGGTTGAGCTGCGCATAGACA 74 48 255 msbA probable transport ATP-binding protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO1396 ATGATTGAGCGTATCTGGTCTGGTCAATCG 71 47 CTACTTAGTATCAGGAGATAGCGCCTGAATATTT 65 38 255 lpxK tetraacyldisaccharide 4'-kinase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Lipopolysaccharide biosynthesis none EC:2.7.1.130 YPO1397 AACAGTTTGTGCATCCCGATGAGATACGGG 74 50 TTAACAACGTTAGTTTGAGGGCGGCTGCAC 74 50 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1398 ATGACGTTAAAAATGGGGCG 62 45 TTAGAAAGCGATCACATCTGCTG 62 43 210 cspB cold shock-like protein Other 5.F Adaptions and atypical conditions [36] none YPO1399 ATGGACCACCGTTTACTCGAAATTGTTG 69 43 TCATGCGTGCTTCTCATCAATTGACAG 70 44 183 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1400 ATGAGTTTCATTGCTATAATTCCCGCCC 69 43 TTATTGATTGAGCATGATAGCCCGGACTC 70 45 753 kdsB putative 3-deoxy-manno-octulosonatecytidylyltransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Lipopolysaccharide biosynthesis none EC:2.7.7.38 YPO1401 ATGATAAACCACTTGCGTCAGATAACCGG 69 45 CTAATCCAACCAAGGGAGAAGCTGCC 69 54 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1402 ATGCAGGATCGCAATTTCGATGATATTG 69 39 TCATAATGGGTCCTTCAGATTCGGCTTAAA 70 40 786 smtA putative methyltransferase Other 5.I Unknown [1066] none YPO1403 ATGAGTGAATTTTCCCAGACAGTACCCGA 69 45 TCAATATTTGTTGATGACATGTGCCTGCA 70 38 255 mukF kicB putative killing factor protein Cell processes 4.H Cell killing [2] none YPO1404 ATGTCATCAACAAATATTGAAGTAGTAATGCCCGT 69 34 TCATTCCTGTTCATCCTCTACACTGTCCG 69 48 729 mukE kicA conserved hypothetical protein Other 5.I Unknown [1066] none YPO1405 GCACTGAGCCAGCTTAGCGAACAGA 69 56 CAGCCGCACACTTTTTACCTGACCA 70 52 255 mukB cell division protein Cell processes 4.C Cell division [24] none YPO1407 TCGTTTTATACTGCGCTTTAGTTTGCAGCCTGATG 74 43 GAGATTTGTGCACCAGATCGCACCATTTTATCATA 73 40 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1408 ATGGATAAAATTGATAATAATCGCCGCAAGTG 69 34 TTACCAAGCCCGTGTTGGCCC 70 62 549 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1409 ATGAAATATCAAATTATTCCAGTCACGGCGTTT 70 33 TCACCAAATAGCCGGCTCTTCTCG 69 54 648 none metallo-beta-lactamase superfamily protein Other 5.I Unknown [1066] none YPO1410 ATGGAAGCCTCTGACATGTTTGAAAAA 66 37 TTAGAGCACCGCAACGATAGCTTCACAT 70 46 255 aspC aspartate aminotransferase Amino acid biosynthesis 1.D.2 Aspartate family [24] "Glutamate metabolism. Alanine and aspartate metabolism. Cysteine metabolism. Arginine and proline metabolism. Arginine and proline metabolism. Tyrosine metabolism. Phenylalanine metabolism. Phenylalanine, tyrosine and tryptophan biosynthesis. Carbon fixation. Alkaloid biosynthesis I" none EC:2.6.1.1 YPO1411 ATGATGAAGCGCAATATTCTTGCAGTAGTAATCC 70 38 TTAGAACTGGTAAACCAAGCCAACAGCAAC 69 43 255 none putative outer membrane porin C protein Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO1412 ATGAGCGTAGTGCCTGTAGTCGACGTACTG 70 53 GGCATTTCTCGGTGTGCGTGGGAAC 74 60 255 asnS tss asparaginyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Alanine and aspartate metabolism. Aminoacyl-tRNA biosynthesis none EC:6.1.1.22 YPO1413 ATGACTCAAGACGCCTCACCGATTTTG 70 48 TTAACTGGCTTTCTTGACTAACGGTAGCGCA 71 45 255 pncB putative nicotinate phosphoribosyltransferase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.7 Pyridine nucleotide [6] Nicotinate and nicotinamide metabolism none EC:2.4.2.11 YPO1414 TCATTGGGTCAAGTGGGAAGATCCC 70 52 TCATAACGTTTCAGGCGGATCAACG 69 48 255 pepN putative aminopeptidase N Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO1415 ATGTATTATCCACTTGTCAGAAAAGCACTATTTCA 66 31 TTAGATATGAGTGACGATATTCTTAATCAAACCCG 67 34 255 pyrD dihydroorotate dehydrogenase Purines; Pyrimidines; nucleosides; nucleotides 1.F.2 Pyrimidine ribonucleotide biosynthesis [8] Pyrimidine metabolism none EC:1.3.3.1 YPO1416 ATGCGAATTAAGCCAGACGATAAATGGC 69 43 TTATACCGCACGGTCATACGCTGTTGT 69 48 552 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1417 GTGATTACCCTCTCCCGACTTTACGTTCATC 70 48 TTATTTGCCACTAAGGGAAATATCGCCTTTAGG 70 39 255 none putative iron-sulfur binding protein Other 5.I Unknown [1066] none YPO1418 GGACTGGAAGAACTGTTAAAAAGC 60 42 AACTGATTAGAGGGCAGTTCTAGC 60 46 1400 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1419 CTGGCTGTCGTTCAGCGATGCACCTTTATTAG 74 50 ATGCCACCTCTAACGCCTGCTCAGTATCAGC 74 55 255 uup ABC transporter ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1420 TTGTGTGCTGTTATTGAGCCTGT 62 43 TTATTGTCCGTCACCTTGCGG 65 52 pqiA putative paraquat-inducible protein A Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1421 AGAAGGAGCCGCAAGGTGACGGACAATA 74 54 TCAAATACTAGCGCATTGCTCTTCTCATTCAGTGT 72 40 255 pqiB putative paraquat-inducible protein B Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1422 ATGGCAGTTATCGTCGCGCTGTTACT 69 50 TTACTTAATCTTTTGCAATTGAGCGGCGAT 70 37 567 none putative lipoprotein protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1423 TTGTCAGGGGAAGGGGGTT 64 58 TTAAAAAACAGAAAAGCAATGCG 61 30 141 none hypothetical protein Other 5.I Unknown [1066] none YPO1423a ATGAAGAGACAGAAAAGAGATCGC 60 42 TTAAGCGGTCACAGCCCTG 62 58 168 rmf putative ribosome modulation factor Macromolecule metabolism Synthesis and modification of macromolecules 3.A.3 Ribosome maturation and modification [6] none YPO1428 ATGAGTACACGCCATGTAGTAATTACAG 61 39 TCAGGAGAGCAGATTACCCCC 63 57 none putative 3-oxoacyl-[acyl-carrier-protein] synthase II (pseudogene) 1.H Fatty acid biosynthesis [33] Fatty acid biosynthesis (path 1) none acyl-carrier-protein YPO1429 ATGGATTCTCTCTTGGTAACACTGA 60 40 TCATCTCATGACAAAGAATGTTATTGC 63 33 189 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1430 ATGGCCATTACGCTGGCTAAACTGGT 69 50 TTAGAAAGCGTTGGTGTCTTTAAACAGACCTACTT 68 37 627 fabA 3-hydroxydecanoyl-[acyl-carrier-protein]dehydratase 1.H Fatty acid biosynthesis [33] Fatty acid biosynthesis (path 1) none acyl-carrier-protein YPO1431 CATCCGCAATCTCAACCGCGGTTTATG 74 52 GGCCATGGCCAGCGGCGTTTAT 74 64 255 none putative Lon protease Other 5.I Unknown [1066] none YPO1433 ATGCTTGGCTTAAGTTACACGGTCACTGAA 69 43 TTCTTTATCTAAAATATCTTTCAAGTCCTGCTTCA 65 29 495 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1435 ATGAAAAAGACAGCTATCGCATTAGCAGTGG 70 42 TTAAGCCTGTGGCTGAGTCACAACTTCTTT 69 43 255 ompA tolG tut con putative outer membrane porin A protein Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO1436 ATGCGTACTCAATCACTTAAACCTTATCATGCTAA 68 34 TAATGATACAAATAAGAATGAATTTTTAACGTGGC 66 26 507 sulA sfiA putative cell division inhibitor Cell processes 4.C Cell division [24] none YPO1437 AAAAAGGATCGCTCAAGCACAAGTTCG 69 44 TTATGCCGTTTCATATAATGGAGCCTTTGC 70 40 636 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1438 CCATGGTGGATTGAACAACCCAAAC 69 48 CGGTAGCAGTTCAAGCAGCAAACCA 70 52 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1439 ATGCGTACTGTATTGAATGTTCTTAACTTTGTTTT 66 29 TTACCGATGCTGGCGTTGAGCA 70 55 447 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1440 TCCCTATAACCGGGTCCGCTTGCTGAAT 74 54 AATAGAAGGCCGTGCCGTATCTTGTAGTAACCACA 73 46 255 none putative helicase IV Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] Starch and sucrose metabolism. Folate biosynthesis none EC:3.6.1.- YPO1441 ATGGAACTGACTACCCGCACTATTGCG 70 52 CTATTTTAGGTCCAGGCGCTGTTGCA 69 50 465 mgsA methylglyoxal synthase Central intermediary metabolism 1.C Central intermediary metabolism [63] Pyruvate metabolism none EC:4.2.99.11 YPO1442 ATGAAACTTGGTCTGGTTGCAGGGATG 70 48 TTTTTGCCCATATCAGGAAACGTTTCTGG 71 41 681 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1443 ATGCATGATAAAGATATCGCCGACATACTCAA 69 37 TCACCCTTTTTCTAATCCCAAGCGGG 71 50 417 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1444 ATGATCGCCAGCAAATTCGGTATAGGC 70 48 TCAGTTACGTAGGTGCGGAGCCTGTAACT 70 52 318 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1445 ATGACCGTACGCCTTATTCTTGCTAAAGGAC 69 45 TTACATTACCCGACACGCGAACCCT 70 52 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1446 TGATTATGTCAAAAATATATATCGTTGCGTATGTC 65 29 TCAGTAGCGAATGCTGAACGTCTCAAATG 70 45 285 none putative acylphosphatase Other 5.I Unknown [1066] Glycolysis / Gluconeogenesis. Phenylalanine metabolism. Pyruvate metabolism none EC:3.6.1.7 YPO1447 ATGTTGGAGTTTGAAGGTCGAATCATCGATA 70 39 TAAATGCATTTAACCGGTTTAGGAAGCCC 69 41 330 none putative sulfite reductase subunit protein Central intermediary metabolism 1.C.5 Sulphur metabolism [13] none YPO1448 ATGGACGAAACCTACATCAAAATTAAAGACCAGTG 70 37 CTATCTTGCTTCATTTTGTTTGTCAATACTGATTT 66 29 288 tnpA transposase (partial) Other 5.A IS elements; Phage-related functions and prophage [210] none YPO1449 ATGTTTGTTGCTATGAATGATAATAAAACAATGCT 66 26 TTATGTCGTTCCTCTCATTAGAATTACCGTATCTT 66 34 255 cnf cytotoxic necrotizing factor (partial) Cell processes 4.I Pathogenicity [38] none YPO1451 CGATTTCTTATCGCGGCTGAGCAGT 70 52 ACACCCCGCCAGAAAATCGTTGTAA 70 48 255 none putative oxidoreductase Other 5.I Unknown [1066] none YPO1452 AAAAACAATATTGATAACGGGGGCTCTTTCTG 69 37 TTACTGTGCTGTGTATCCACCATCTATCGTAATC 68 41 747 none putative short chain dehydrogenase Other 5.I Unknown [1066] none YPO1453 ATGATGGTAAGAGCTACTTGTTGTTG 60 38 TTAAAATCGGCTAAATGTATCACCTAC 60 33 321 none hypothetical protein Other 5.I Unknown [1066] none YPO1454 TTGAATACATCATTTGGACAAGATATCA 62 29 TCAGAAGACATGAAACTCTCCTTTTC 61 38 459 none putative (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydrase 1.H Fatty acid biosynthesis [33] none YPO1455 ATGTCTTCTGATCGTATCGTTATCACTGGCG 70 45 TTAACCATGATATCGACTAAATAAGCTAGCGCTGT 68 37 255 none putative beta-ketoacyl-[acyl-carrier-protein]synthase 1.H Fatty acid biosynthesis [33] Fatty acid biosynthesis (path 1) none acyl-carrier-protein YPO1456 ATGGTTAACATGAACCTTTTTATTAGCGGTGGT 69 36 TTAATAAACCCAGTCAATGCCACCGGT 69 44 747 none putative beta-ketoacyl-[acyl-carrier-protein]reductase 1.H Fatty acid biosynthesis [33] Fatty acid biosynthesis (path 1) none acyl-carrier-protein YPO1457 AAAAATCAGTATCTACCCAAGTAGTTTGGCGCTG 70 41 TCATGCATAGCGATAACGCCGTAAGTG 70 48 255 none putative hydroxymethylglutaryl-coenzyme Asynthase 1.H Fatty acid biosynthesis [33] "Synthesis and degradation of ketone bodies. Valine, leucine and isoleucine degradation. Butanoate metabolism" none EC:4.1.3.5 YPO1458 TTGAGCGTATCGATAACCACTTACGGC 68 48 TTAGTCATCCGCATATTCATCATTAAATAACTTAA 65 26 756 none putative enoyl-CoA hydratase 1.H Fatty acid biosynthesis [33] none YPO1459 ATTTAAGAAAAAGTGATGAAGGTATTGCTTTTATG 65 26 CTAACCCGTGTAATTATCTTGTATTTGTTGTTCGA 68 34 768 none putative enoyl-CoA hydratase 1.H Fatty acid biosynthesis [33] none YPO1460 ATGCTGAATAACTTGAGTGAAATGACCGTATTGG 70 38 TTATTTCTCAATAAAATTCGTCTCAATCATGTCGA 68 29 789 none putative short chain dehydrogenase 1.H Fatty acid biosynthesis [33] none YPO1461 GTGACCACTTGGTATTTTCACTGTATT 61 37 TTATTCCTGTTTATTCCAAACAAGCT 61 31 489 none hypothetical protein Other 5.I Unknown [1066] none YPO1462 ATGGATAGAGATCATATTGCTAGCATTG 62 36 CTAAGATTCTGAACTGCTCGTTACAA 60 38 249 none putative acyl carrier protein 1.H Fatty acid biosynthesis [33] none YPO1463 ATGACATCAAATCATGCCATTTTATTTCCAGG 70 34 ACAAAATATTCTTAACCATATCCAGCAGTAAAGAA 65 29 849 none putative acyl transferase 1.H Fatty acid biosynthesis [33] none YPO1464 TTGGGTATTGTAGTCCCTCCG 61 52 TCAAACCGCCTGGTTGGCA 68 58 168 none hypothetical protein Other 5.I Unknown [1066] none YPO1465 ATGTCCTCTTCAAGCTTCCAAAATGAGATACCTAA 69 37 TTAACCCTCTTTTGGTGCCAGGGC 69 54 501 none conserved hypothetical protein Other 5.I Unknown [1066] YPO0978 YPO1466 ATGCTGATGTCTGTACAGGAAAACCGTG 68 46 TTATGCCTTAGCCTTCGGCATTTGG 69 48 255 none conserved hypothetical protein Other 5.I Unknown [1066] YPO0977 YPO1467 ATGAAGATTGAACGTCCTCTGTGGACTCG 70 48 TCATGCGCGTAGCACCGCA 70 63 255 none conserved hypothetical protein Other 5.I Unknown [1066] YPO0976 YPO1468 ATGAATCCTCACCTAACCGAACACCCC 70 52 TTACACCGGCTCCGGCAGTAAGG 70 61 687 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] YPO0975 YPO1469 ATGAGTCGGTGGTGGCAACGTG 69 59 TTCTCCATTTCTTGCGTTGATACGTCACTTTCATC 73 40 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] YPO0974 YPO1470 ATGGCAATTCCAGTTTATCTGTGGCTGA 69 43 CTATGCGGTGGCGCGCTC 68 72 492 none conserved hypothetical protein Other 5.I Unknown [1066] YPO0973 YPO1471 TGCCAACCAGATTGACCCGATTTTT 70 44 GTGATGCCATCTTCTTCATGCCAGC 69 52 255 none putative ATPase subunit of ATP-dependentprotease Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO1472 CCAGCCGTTCTGTTACGACATCCAA 69 52 TCGCTTTACGCGCCAATAACTCCAT 70 48 255 none conserved hypothetical protein Other 5.I Unknown [1066] YPO0970YPO1475 YPO1473 ACGGTGATAAATGAAAGTCTGGCCAATCA 70 41 AAAAATTTGCGTTGTTCAAGTCCTTTATCTGCT 69 33 255 none hypothetical protein Other 5.I Unknown [1066] none YPO1474 ATGAAATCATTTACATTACTCTCTTTATTTATACT 59 20 TCATAAGCCTAATGTACCTCCCAG 61 46 774 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1476 CTCCTTTCTTGCGCGCAAAAATGTC 70 48 ACAGTTGCACTGGCTTGCCAAAATG 70 48 255 none hypothetical protein Other 5.I Unknown [1066] none YPO1477 GTGACTTACAATGTTTTTTCGCCA 62 38 TTATTGGGGTGGGGTTCTG 61 53 471 none hypothetical protein Other 5.I Unknown [1066] none YPO1480 TTGCTTTGGTTATCACTGCACGAAACC 69 44 TCATAATACCGCTACAGCCTGACTTCCG 69 50 138 none transposase (partial) Other 5.A IS elements; Phage-related functions and prophage [210] none YPO1481 ATGCCCGTAAAATTAACCACCATTCCC 69 44 TCACGTTTCATTCTCCTTGCGGG 69 52 255 none hypothetical protein Other 5.I Unknown [1066] none YPO1482 CAGAGCCTGTATCAGAAACTCAGC 62 48 CAGAGCCTGTATCAGAAACTCAGC 62 48 ~1400 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1483 GCTTGTGCCGCAGAGCCTGAGC 72 68 TTATCCGCATAATACGGCCGCACG 71 54 255 none hypothetical protein Other 5.I Unknown [1066] none YPO1484 ATGGCAAAAGGCTATTACCTTGGGGTTG 70 46 TTACTTACCCTGCGGGTGATCAATTTGAC 69 45 255 none hypothetical protein Other 5.I Unknown [1066] none YPO1484a ATGAAAAGAATAATAATGGTTGTTACGATT 61 23 TTATCCATTAGGATAACTATCTTTAAATGGC 61 29 471 none hypothetical protein Other 5.I Unknown [1066] none YPO1485 GACTTAACCCTGCGTTATTTTGACGCTGAAATGC 74 44 AAACGTTCTCCTGTCGGTTGCAGTATCAGAGTCAG 74 49 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1486 ATGGGAAGAGAATCATCAGTCCCGC 69 52 TTATTTTTCCAAACGGTAGTTAACACGTCGGTT 69 36 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1487 ATGACGCGACGCTGTCAGACGATATAC 69 52 TTTTTCTCCGTCCGCAGGGTCA 70 55 681 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1488 ATGCCGGATACCTCCTCGCCG 71 67 TCAAAATGACTCCCGCTGATTGAGGTAGT 70 45 453 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1489 ATGGCAGGTAATACCGAGCGTCTGC 69 56 TTACTGAACGCCAGGAGGTACGACCAG 70 56 255 none hypothetical protein Other 5.I Unknown [1066] none YPO1490 ATGGGCCTTTCATTGAGCTGTATAAAAACC 68 40 TTATTTATAATCAACCTCATCCCATCCGTTAGAGT 67 34 624 none hypothetical protein Other 5.I Unknown [1066] none YPO1491 GTGTGCTGGGGCGTTTGTTGTTTAG 69 52 TTATGAGTGAATCCCTTGGCTACTCAGATAATCTT 68 37 339 ybiT ABC transporter ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1492 ATGAATATCAGTGGGCATATAGCAACGGGT 69 43 TTATATTTGCTCATAAAAATGCGTATCAACGATT 67 26 654 none hypothetical protein Other 5.I Unknown [1066] none YPO1494 ATGTTGCCGGAACTTTCAGATGTTGAG 69 44 TTATAGTGGCGATCTTCTATCACTCTGGCAGAC 70 45 771 moeB chlN molybdopterin biosynthesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.4 Molybdopterin [9] none YPO1495 ATGGATCACTGTAATACCTCGGATTTACTCTCTCT 68 40 TCAACCTCCGACAGGGTGATGAATG 70 52 255 moeA chlE bisB narE molybdopterin biosynthesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.4 Molybdopterin [9] none YPO1496 ATGCGCGAAACAATACCCATTAAATACATTGATA 70 32 AATATCTGCCAGATAAGCCTTAATCGTTGCCAGTA 71 40 255 none putative heme-binding protein Other 5.I Unknown [1066] none YPO1497 ATATTACACAACAAAAGTCATAAAAACCAGAGTCC 65 31 TTTTTCATGTTAATATTCCCATCTTTCATGTTGAG 68 29 669 none ABC transporter ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1498 ATACTTTTCGTGTTGCTTATTCTATTTTTAAGCTG 65 29 TCTATGATATTTGCTGTTTTATCACTATCATCAGG 65 31 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1499 TGCCCAATGGTGAAAAAGTCAAATCG 70 42 GCAACCAGTACGGGGGTTATATTTTCC 67 48 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1500 TTGGAGAATAACATGAACCCTTCA 62 38 TTAGTCTTCTGCAAAGCTCCTCG 62 48 213 none hypothetical protein Other 5.I Unknown [1066] none YPO1501 GTGAATACGTCACTTGAACTTCTCGAAGAGCAT 70 42 TTACGGCTGTAGGTGTGCAGCATGA 69 52 843 none putative esterase Other 5.I Unknown [1066] none YPO1502 ATGGAGATGATTAAAACCCGCGCC 69 50 TTATTTGCTTTCGGAAGAGTGATTAAAATGGATCA 70 31 255 none probable alcohol dehydrogenase Other 5.I Unknown [1066] Glycolysis / Gluconeogenesis. Fatty acid metabolism. Bile acid biosynthesis. Tyrosine metabolism. Glycerolipid metabolism. Pyruvate metabolism. Methane metabolism none EC:1.1.1.1 1.2.1.1 YPO1503 ATGATCATGCAGTCGTATCATGCGATG 69 44 TCAATTCAATCTATGTATTTCAACGTTCTCGATAA 67 29 243 none putative LysR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1504 ATGGCGCTAAGAGTTGCATTAAGTGGTTTTT 69 39 TCACGTGGCAAGCGCTTCCTG 71 62 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1505 ATGCTTGTCTTATCTGGATGCGTAAGCCT 69 45 TCAGCCGTGGTGACGAACCG 70 65 705 folE GTP cyclohydrolase I Biosynthesis of cofactors; prosthetic groups and carriers 1.G.2 Folic acid [9] Folate biosynthesis none EC:3.5.4.16 YPO1506 ATGCGTCAACGCATCGCAACG 71 57 TCAGAGCTTAGTGTTGCGTATTTGTAACTCTTGG 69 41 255 yeiB putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1507 ATGAATAAGAAGGTTTTCACATTAGCAGCTTTGGT 69 34 ATTTAGTGAATTCAGCCAGATTATCTTTATCAACA 66 29 255 mglB galactose-binding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1508 CAACCTCGTGACTGGTTACTGGAAATGAGCAATAT 72 43 TTAGAGATGCAAGGATGCAAGGCGTAATATTT 69 37 255 mglA galactoside transport ATP-binding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1509 TAAGAAAGATATGCTCACTTACTTTAAAGAGAGCG 65 34 CTATTTCTTCTTCGCATACTTCAGTGAATCCAACG 71 40 255 mglC galactoside permease Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1510 ATGTGGAAACGCCTGATTATTAGCTTAATT 65 33 TCATTGGCTTGGTTGTTTCTTTTCTGCC 71 43 738 sanA putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1511 TTTTAAAAACGACGACGATAAGCA 62 33 CTTCTTCCGAAGTCACAATAGCAA 62 42 ~1400 "sfcA, maeA" NAD-dependent malic enzyme Central intermediary metabolism 1.C.2 Gluconeogenesis [5] Pyruvate metabolism sfcAmaeA EC:1.1.1.38 YPO1512 ATGCAAGCACGTTTTCACACCTCTTG 69 46 TTAAAACGTCACGCGTTTTACCGCTG 70 46 885 cdd cytidine deaminase Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Pyrimidine metabolism none EC:3.5.4.5 YPO1513 ATGATCAGCAATCTATGGTGGTCACTGC 69 46 TCAACCAAACAAATGTAATAGGACCGGGA 70 41 696 yohK putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1514 ATGCGTAATATGATGTCACTTTGCTGGCA 70 41 TCATTTTTCCCCCTCAGTCGGTGTT 69 48 408 yohJ putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1515 ATGCAAAGATTCTCATCGCGCGTAAC 69 46 CTATTTTGCCAAATGGTAGCCGCGAT 69 46 255 none putative multidrug resistance protein Other 5.D Drug/analogue sensitivity [28] none YPO1516 ATGGCAACACAAGGTTCCTTGCC 68 52 TTAACCTAAATATTCGATGATAGAGAGGCCGCC 70 42 255 none hypothetical protein Other 5.I Unknown [1066] none YPO1517 AAAAATCGCTTACCCTATATTGGCTTTGAGCC 70 41 CTATTGACCATTTTGGGCTGCAAGGG 70 50 255 none putative sugar ABC transporter Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1518 TTGGTTTTTCACCTTTTCCCG 63 43 TCACTCATCTTTTTTTAATGGTTGC 61 32 528 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1522 ACGTGCGCGCTACCATACGCTAAC 69 58 TCACTTCACTTGCATGCCTGGCTG 70 54 255 metG methionyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Methionine metabolism. Selenoamino acid metabolism. Aminoacyl-tRNA biosynthesis none EC:6.1.1.10 YPO1523 ATGAGCGAAAAATCCCCCGAGC 69 55 TTACACCGCACGGAATGAGATTTCTGTC 70 46 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1524 ATGACTGACAAAGCACATCAGTGCGTC 69 48 TTACTCAAAGAACTGACTGATTTTCGCTTTTAGAA 67 31 642 udk b2066 uridine kinase Purines; Pyrimidines; nucleosides; nucleotides 1.F.5 Miscellaneous nucleoside/nucleotide reactions [9] Pyrimidine metabolism none EC:2.7.1.48 YPO1525 ATGAGACTGTGCGATAGGGACATAGAGGC 69 52 CTAGTCTTTATCAATACGGCTCGCCACAGC 70 50 582 dcd dus paxA b2065 deoxycytidine triphosphate deaminase Purines; Pyrimidines; nucleosides; nucleotides 1.F.3 2'-deoxyribonucleotide biosynthesis [8] Pyrimidine metabolism none EC:3.5.4.13 YPO1526 TTAGTTGCAGGTATGAGCGCATTAGTGCTGTTGG 74 47 GATTTTGTTGGTTACGTTCAGCCCACTCCC 73 50 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1527 GATCCAACTATTTGGGCAGGACTGGCTACATTG 74 48 TTCACTTTTAAGATCCTGTGGCTATTGACCACCAG 72 43 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1528 GTGTCAAATACAGCACAGTTAATTACACC 62 38 CTAACTAATAAGATTTAATGGGGGTTTTTC 61 30 780 none putative ferric iron reductase Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO1529 CTATGAGGAAAACCATTTTATAGATCAAGGTAATG 65 31 TCATGATTGACTGTTATAGAGAGTCGGATAGTTTT 66 34 255 none putative decarboxylase Other 5.I Unknown [1066] "Ascorbate and aldarate metabolism. Ubiquinone biosynthesis. Purine metabolism. Arginine and proline metabolism. Tyrosine metabolism. 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation. Phenylalanine metabolism. Tryptophan metabolism. Aminophosphonate metabolism. Pyruvate metabolism. Fluorene degradation. Vitamin B6 metabolism. Flavonoids, stilbene and lignin biosynthesis. Alkaloid biosynthesis I" none EC:4.1.1.- YPO1530 CTTATGACTTTATTGGCATCGGTATTGGCCCGT 74 45 TCACTCTTTCCTCCTCAGTGATGGCG 70 54 255 alcA putative siderophore biosynthetic enzyme Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1531 ATGAACGCTGAGAGGAATATTGAGAGCGATA 69 42 TCATTGATGCTCCTTTTGTAAGGCAAGG 69 43 579 alcB putative siderophore biosynthetic enzyme Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1532 ACCAGAGTTTGGAACTCCCCCATTTGCAG 74 52 CACAGGGTCAGCTAAATCCAGCATGTGCTG 74 53 255 none putative siderophore biosynthetic enzyme Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1533 TTGTTGCGAGCGCTCAGCC 68 63 CTATACTACATTCGCTGTATGTCGAGCCAGTGTC 70 47 357 none putative iron-siderophore transport system;ATP-binding component Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1534 ATGCATCCCGTTGATTCAGTCAGAACG 71 48 TCACTTTGTTTTCCTCACTTTGGCGTATAGC 69 42 255 none putative iron-siderophore transport system;membrane permease component Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1535 ATGTGTGTGTTAGTCAGCCTGACTCTCGG 70 52 TCAACGGGATGCATAGACGATACCTTTTT 69 41 255 none putative iron-siderophore transport system;transmembrane component Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1536 ATGAATAAAACGCGAACCTGCACCAC 69 46 TCATGGCAGTGTCTCTTTGGTATCAGCC 70 50 255 none putative iron-siderophore transport system;periplasmic binding protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1537 GGCATGGGTGCTTGCTGCTAATGTA 69 52 CCGATTGGGCTACTGAGGTTTCTGG 69 56 255 none putative iron-siderophore receptor Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1538 CTCATGCCAATGCACATTTAGTAGGGAAAATACTG 71 40 AATTGGGTTGACTAAGGTGCCGGCAAATTT 73 43 255 none putative siderophore biosynthetic enzyme Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1539 ATGAAGTGTTTAAAAGCCGTCATTCCTGTTG 69 39 TTAATCGAGTTGCTGTTTTAGCCAGGCA 69 43 891 galU UTP-glucose-1-phosphate uridylyltransferase Central intermediary metabolism 1.C.3 Sugar nucleotides [11] Pentose and glucuronate interconversions. Galactose metabolism. Starch and sucrose metabolism. Nucleotide sugars metabolism none EC:2.7.7.9 YPO1540 ATGACCAAATTGAAAGCAGTCATCCCTGT 69 41 TTACGCGACGAAATCCTTTAGCCATG 69 46 894 galF UTP-glucose-1-phosphate uridylyltransferase Central intermediary metabolism 1.C.3 Sugar nucleotides [11] Pentose and glucuronate interconversions. Galactose metabolism. Starch and sucrose metabolism. Nucleotide sugars metabolism none EC:2.7.7.9 YPO1541 CAGATCGGCGTTGTCGGTATGGCG 74 62 TCCACTCAGTGTGGAATACACCTTCTTTATCTGTC 70 43 255 gnd 6-phosphogluconate dehydrogenase;decarboxylating Energy Metabolism Pentose phosphate pathway 1.B.5 Pentose phosphate pathway [3] Pentose phosphate pathway none EC:1.1.1.44 YPO1542 GTGTTAACAGAACAACAAATCAACCAATTGGATT 69 32 TTATTTCTCGTGGCGTTCCCGC 69 55 615 hisI hisIE histidine biosynthesis bifunctional protein[includes: phosphoribosyl-amp cyclohydrolase Amino acid biosynthesis 1.D.5 Histidine [8] Histidine metabolism none includes: phosphoribosyl-amp cyclohydrolase [EC:3.5.4.19 3.6.1.31 YPO1543 ATGCTGGCAAAACGTATAATTCCTTGTCTG 69 40 TTAACACACTCTTATCTCCACGCCCTGTTC 69 47 777 hisF histidine biosynthesic protein (cyclase) Amino acid biosynthesis 1.D.5 Histidine [8] Histidine metabolism none YPO1544 ATGATTATTCCCGCTTTGGATTTGATCG 69 39 TTATACGTTTTGCCAGCATGCGATAGC 69 44 738 hisA phosphoribosylformimino-5-aminoimidazolecarboxamide ribotide isomerase Amino acid biosynthesis 1.D.5 Histidine [8] Histidine metabolism none EC:5.3.1.16 YPO1545 ATGGATGTGGTGATCCTGGATACCG 68 52 TTACATCTCCAGAAAGTTTTTCATCAATTGGGC 70 36 591 hisH amidotransferase Amino acid biosynthesis 1.D.5 Histidine [8] Histidine metabolism none EC:2.4.2.- YPO1546 ATGAGCCAGAAATTTCTTTTTATTGACCGC 69 37 TTACAGCACTCCTTTTGAACTTGGCAGG 69 46 255 hisB histidinol-phosphatase andimidazoleglycerol-phosphate dehydratase Amino acid biosynthesis 1.D.5 Histidine [8] Histidine metabolism none EC:3.1.3.15 4.2.1.19 YPO1547 ATGAGCCAATCTAATAACGTCACGGACCTG 70 47 TCATATCGTTCCCTTACGGATGCTGG 69 50 255 hisC histidinol-phosphate aminotransferase Amino acid biosynthesis 1.D.5 Histidine [8] "Histidine metabolism. Tyrosine metabolism. Phenylalanine metabolism. Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:2.6.1.9 YPO1548 ATGCAGCCGACGAATTTCAATACCCT 69 46 TTACTCCTTATTCACGGCGGTCAGGG 70 54 255 hisD histidinol dehydrogenase Amino acid biosynthesis 1.D.5 Histidine [8] Histidine metabolism none EC:1.1.1.23 YPO1549 ATGCTGGATAAAACACGTTTACGTATCGCG 70 43 TTTTTCAATCGGTAATACCAGAATGGAGCTG 69 39 900 hisG ATP phosphoribosyltransferase Amino acid biosynthesis 1.D.5 Histidine [8] Histidine metabolism none EC:2.4.2.17 YPO1550 TTGACTCACTTGAGCCAGCTC 61 52 TTAATCACCATCACCACCATCA 61 41 225 none hypothetical protein Other 5.I Unknown [1066] none YPO1551 AAAAAGTAGCCATTATTGGGCTGGGTTGG 70 45 TTAATTCAACGGCATCCGCGAAG 68 48 828 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1552 ATGGCGCGGCTCGAGCCTA 70 68 TATGACGGGTATACTTATCTTTAATAGCACTGAGC 65 37 435 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1553 GTGAGCAAAGAATTACCCCTACCAGACGTG 70 50 TCACCGTTTCTGAATATAAGTCAGTGCCAGG 70 45 255 none ribose transport system; permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1554 CCCCCTCCCGCCTTGAGATG 70 70 CTAAAATTTCGCCCTGATGTAATGTGAGGG 70 43 894 none sugar transport ATP-binding protein(pseudogene) Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1556 ATGAGCGCGAACGCAATTCG 68 55 TCAGTGCTGAGCCGCGATTTCC 70 59 255 none putative dehydrogenase Other 5.I Unknown [1066] Benzoate degradation. Ethylbenzene degradation none EC:1.1.-.- YPO1557 CAACTGTTGCCGTCGGCACGAATC 73 58 TTATAACTGGGCAGGTTCTTCAGTAAACTGCG 70 44 255 yeeF Amino acid permease Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1558 AGATAAAAATAAGCAACCAACATTTTACGTCCACG 70 34 TTAACTCACTAATCCCTTGGCATATTCAAACAACG 70 37 255 sbcB xonA cpeA exodeoxyribonuclease I Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO1559 TTGAAAAAGCTTTTATTAACCGGCGCAA 69 36 TTATTTAAAATCGACAGCCATTTGTTGCTGG 70 35 255 none hypothetical protein Other 5.I Unknown [1066] none YPO1560 ATGGATAATGCAAGTAAGCCAACTTTCCAGG 70 42 TTACTTAACTTCACCCATCGCTTTCAGTTTTT 67 34 318 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1562 ACAGCACAACAAGGTATTGATCGT 62 42 ACAGGATTTCCCTTTTTATCCACA 62 38 ~1400 none putative intimin (pseudogene) Cell processes 4.I Pathogenicity [38] none YPO1563 ACTTTAACCACTATCCAGACCCCACGCTTAACTCT 71 46 AGCCGTTGCCTTTGCAGGCCAAAA 74 54 255 none putative transmembrane transporter Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1564 GTGGTGTCCGCTCCGCTGC 70 74 TTATAAGAATCGCCGTTCATGATCCGC 70 44 426 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1565 ATGAATCTGAAAGGGAAGAAAGCCTTGGTC 70 43 TTAATTGCTCCAGCCTCCGTCGATAATATGTAT 70 39 741 none putative oxidoreductase Other 5.I Unknown [1066] none YPO1566 ATGAAACTATTACGTTATGGTCCCGTCGGC 70 47 CTACGCTTGTATCGTTTTCTGGCACTGTTC 69 47 843 none putative hydrolase Other 5.I Unknown [1066] "Ascorbate and aldarate metabolism. Ubiquinone biosynthesis. Purine metabolism. Arginine and proline metabolism. Tyrosine metabolism. 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation. Phenylalanine metabolism. Tryptophan metabolism. Aminophosphonate metabolism. Aminophosphonate metabolism. Pyruvate metabolism. Fluorene degradation. Vitamin B6 metabolism. Flavonoids, stilbene and lignin biosynthesis. Alkaloid biosynthesis I" none EC:4.1.1.- 5.3.3.- YPO1567 ATGACAATAATCACTGCATTACGCACTGAGG 69 42 TTAAACGCGAAAACGGTACTTCTCTATCGAC 69 42 255 none putative racemase Other 5.I Unknown [1066] none YPO1568 ATGAGCAGAACGGAGGAGG 60 58 TTATATTTCAAGCTGCTGGTGTGT 60 38 174 none hypothetical protein Other 5.I Unknown [1066] none YPO1569 ATGATCATTTCTGCCTCAACGGATTATCG 70 41 TTACCCCCGTTCACTTACTGCCAAAGA 69 48 255 lldD lctD L-lactate dehydrogenase Energy Metabolism Respiration 1.B.7.c Electron transport [33] Pyruvate metabolism none EC:1.1.2.3 YPO1570 GACAACTATTCTTAAACACCTTCCTATTAATCAGC 65 34 GCTTATCCTGCAACCCACGCCCTGA 74 60 255 argG argininosuccinate synthase Amino acid biosynthesis 1.D.1 Glutamate family [19] Urea cycle and metabolism of amino groups. Alanine and aspartate metabolism. Arginine and proline metabolism none EC:6.3.4.5 YPO1571 GTTAAGTTGAAAATCTTCCGCGAAAGCGTGTGGTA 74 43 TCAGACGCTGGGCCGGTAGC 70 70 255 yeeO putative sugar transporter Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1572 AAAAATATCTGCTGATGGCTGGCAGC 69 46 TTACTTCACACTCTGCGGTGCCACG 71 56 255 none putative sugar transporter Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1573 ATGGCTAAAGAAATATTCTGTGCGTTTGGC 69 40 TCAAATTTTGCGCGGCATACGG 70 50 882 none putative polysaccharide deacetylase Other 5.I Unknown [1066] none YPO1574 ATGAAAAAGAAAACACGATCAAACATTTTTAAATT 66 20 TTAGGCCTTACCACTTGACGACAACGG 70 52 696 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1575 ATGACAAAACTCACCTTACAAGAGCAGATGCTAAA 70 37 TTACCACATCAAATCATCAGGCACTTTAAAATCG 71 35 540 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1576 ATGATTAATGTTGCATTGATTGACGACCATATTG 70 32 TCAGTTACCCGCCAGTAGCTGATGCT 69 54 630 none putative GerR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1577 ATGGACGCATTTATTTTAGTTTTTACCCTGGC 69 37 TATATATTCCAAACATCCGTGGCAACCACAGAGAG 73 43 255 none putative C4-dicarboxylate transporter; largesubunit Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1578 ATGGCTCGTTATTATCTCTCTGCGATGGA 69 45 TTATGAATTGCCGATCATCACTACCGG 69 44 507 none putative C4-dicarboxylate transporter; smallsubunit Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1579 ATGAGATTGCCAACGTCTTTCCCTACATTATG 70 41 TTATTGGACGTCACCAATCTGTTTAATCAAGTCC 70 38 255 none putative C4-dicarboxylate transporter;periplasmic protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1580 GTGACGTCGGTATTCATCCGTAATTTTACTTTTG 70 38 TTAATAAGCAATAAAGGTCTGAAGATCCGTCTCAC 68 37 741 none putative phosphopantetheinyl transferase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1581 ATTACTCGCCTGCGATGATGGAAGC 70 52 TAGCCGATTCAGGATTGAGGATGGG 69 52 255 rafA alpha-galactosidase Degradation 1.A.1 Carbon compounds [66] Galactose metabolism. Glycerolipid metabolism. Sphingoglycolipid metabolism. Globoside metabolism none EC:3.2.1.22 YPO1582 ATGGCATCGTACTACCCGTTCTTTCCG 70 52 TTAAGATTGTGGCTGAGAAACTGGAGGG 68 46 255 lacY b0343 lactose permease (pseudogene) Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1584 ATGGACAGAAATAATGAAGTTATTCAGACT 61 30 TTATCGAGTTCGGTGACCGCC 67 57 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO1585 TTGAAGGGAAAAATGACCAATATG 61 33 TTATTTAGAGTCTATAATGCTATTTACTGCATTC 60 26 141 none hypothetical protein Other 5.I Unknown [1066] none YPO1586 ATGCGCGTTGAAGTCAGTATTGATAAAAA 67 34 TTACTCCGCATCGAACCAGTCGTCA 70 52 246 dinI DNA-damage-inducible protein I Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO1587 ATGACTGCACAACCCCAAACCCTAAAAAT 70 41 TTAGCGTTTCACTGACCAATTAAGCGTTTG 69 40 255 pyrC b1062 dihydroorotase Purines; Pyrimidines; nucleosides; nucleotides 1.F.2 Pyrimidine ribonucleotide biosynthesis [8] Pyrimidine metabolism none EC:3.5.2.3 YPO1588 ATGGAAATTCGTGTCATCGCCAGTATAGTG 69 43 TTTTTAATCTCCAGACTTTCCAGTTTGCCATC 69 37 288 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1590 ACTACTCTGTCCTGCGCGTACGCAA 69 56 ACCGCAACCACATCAATAGCGGTTT 70 48 255 rne ams hmp1 ribonuclease E Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] Aminosugars metabolism none EC:3.1.4.- YPO1591 GTGTATTTAGAATCGCGCACCATGAAAAC 68 41 TTATTTTACGGTGGCGTTCTTACGCAAGG 70 45 255 rluC ribosomal large subunit pseudouridine synthaseC Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] Pyrimidine metabolism none EC:4.2.1.70 YPO1593 ATGGAAAATATTATGCCGCAACTGGTTCTTG 70 39 TCATTCGACGGGTTTTACCGTCAGG 70 52 609 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1594 ATGCAAAAGGTAAAATTACCCCTGACCATTG 69 39 TTAATTACTTTTCTTTAAACTGGCTAATACGGCAA 66 29 525 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1595 ATGGCCGTACAACAGAACAAACCAACTC 69 46 TCAGCCGATGACCTTGCGGC 71 65 168 rpmF 50S ribosomal protein L32 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO1596 ATGGGCGGGGACTTCGGTC 68 68 TCAGTCACTCTTGGGTAATACCGCTTCAAG 69 47 255 plsX fatty acid/phospholipid synthesis protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.11 Phospholipids [9] none YPO1597 ATGTATACTAAGATTCTCGGTACGGGGAGTTATCT 67 40 TCAAAAACGAACCAGTGCAGAACCC 69 48 255 fabH 3-oxoacyl-[acyl-carrier-protein] synthase III 1.H Fatty acid biosynthesis [33] Fatty acid biosynthesis (path 1) none acyl-carrier-protein YPO1598 ATGTCGAAATTTGCAATGGTATTTCCAGGT 69 37 TTAGTGTTCAAGCGCACTGTTCAGCG 70 50 255 fabD tfpA malonyl CoA-acyl carrier protein transacylase 1.H Fatty acid biosynthesis [33] Fatty acid biosynthesis (path 1) none EC:2.3.1.39 YPO1599 ATGAGCTTCGAAGGAAAAATTGCACTGG 70 43 TTAAATCATATACATGCCGCCATTGACATGTAAC 70 35 735 fabG 3-oxoacyl-[acyl-carrier protein] reductase 1.H Fatty acid biosynthesis [33] Fatty acid biosynthesis (path 1) none acyl-carrier protein YPO1600 ATGAGCACTATCGAAGAACGCG 64 50 TTACTGCTGGTTAGCGTTGATAAAAT 61 35 acpP acyl carrier protein 1.H Fatty acid biosynthesis [33] none YPO1601 GTGTCTAAGCGTCGAGTTGTTGTGACTGG 70 52 TTATACCTTACGGAATACCAAAGAGCCGTTAGTGC 70 43 255 fabF fabJ 3-oxoacyl-[acyl-carrier-protein] synthase II 1.H Fatty acid biosynthesis [33] Fatty acid biosynthesis (path 1) none acyl-carrier-protein YPO1603 ATGTTTTGGATTAACGGTGTAGAGCAAAATTTGA 70 32 TCATATATCGCAGCAATGCAGGTTTAATAGGTC 69 39 807 pabC 4-amino-4-deoxychorismate lyase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.2 Folic acid [9] none YPO1604 ATGAAAAGAAAAAGCACCAAAGCACTGATCC 70 39 TTACTGTTCATTTTTATCCTTTAGCGACTGGCG 70 39 255 yceG putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1605 ATGAACAGTAAATTTATCGTTATTGAAGGGCTTGA 68 31 TTACACGGGTTCCTGATTGGTCAGC 69 52 639 tmk thymidylate kinase Purines; Pyrimidines; nucleosides; nucleotides 1.F.3 2'-deoxyribonucleotide biosynthesis [8] Pyrimidine metabolism none EC:2.7.4.9 YPO1606 ATGAATTGGTATCCGTGGCTTAACGCC 70 48 TTACAACGAAGGTAAGGTGGAATAAGTACCCGT 69 42 255 holB DNA polymerase III; delta' subunit Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] DNA polymerase none EC:2.7.7.7 YPO1607 ATGTTGTTAGTTGATTCTCATTGCCATCTTGATAG 68 34 TTATGGAAGCGGGCGCTTCTCAC 70 57 810 none putative deoxyribonuclease Other 5.I Unknown [1066] none YPO1608 GTTTAAGAACGCATTTGCAAACCTGCAAAAGGTAG 73 40 GTTACGAATGTATTCGTCCATATCAGTTTTCAGGT 69 37 255 ptsG glcA umG PTS system; glucose-specific IIBC component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] Glycolysis / Gluconeogenesis none EC:2.7.1.69 YPO1610 ATGACCCGGTACTTAAACAAAGATACGACAGTGT 69 41 TCAGCCTCTTGCATAAGCTGCGG 69 57 819 none putative shikimate dehydrogenase Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:1.1.1.25 YPO1611 ATGGCCGAAGAAACGATTTTCAGCA 70 44 CTATTTGTGGGGCAACAAAGGGCC 70 54 354 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1612 ATGCGCGATCTTAAAACGTTGCTATTACCC 70 43 TTATAAAAATAAATAGAGACGCGCACTGCG 67 37 390 ycfL putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1613 ATGAAAAGGTATTTATCTCTGGCGCTGGC 70 45 TCAATATTGGACAGGCGCATTACCAGA 69 44 576 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1614 ATGCGCCTGTCCAATATTGATTCTTCTCT 69 41 TTAAAAAGACAAATTAAAACGTTGGCGCAAC 69 32 867 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1615 GTGGGTCCCGTGATGTTAGATGTTGC 70 54 CTATTGCCCCAACGTTTGTTTATGTGCAT 70 41 255 ycfO beta-hexosaminidase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Glycoprotein degradation. Aminosugars metabolism. Glycosaminoglycan degradation. Sphingoglycolipid metabolism. Globoside metabolism none EC:3.2.1.52 YPO1616 ATGATCGTCTATTTACATGGTTTTGATTCCAATAG 67 31 TTAACCCAGCGTTTTAAATGCTTTGATCC 68 38 543 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1617 AAAAATCGTTATTATTGGTGGTGGTGCAGG 70 40 GTGAAGCTTCAACCGTGGCCTAATCACCC 74 55 255 ndh NADH dehydrogenase Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO1618 TTGTCGCTGACTTGCAGTGC 64 55 TTACAACGTTCTTTGCAGATATTTATCA 61 29 195 none hypothetical protein Other 5.I Unknown [1066] none YPO1619 ATGAGTGCTGGAGAGTCTTCGA 61 50 CTATCCTAAGAAATGGGTATCAACTTCA 61 36 570 none hypothetical protein Other 5.I Unknown [1066] none YPO1620 ATGAAAAAAGTAGCTATAATTTTTATCGTGTT 61 22 CTATTTCATTACTTCAACTATGGTCGTCT 61 34 414 none hypothetical protein Other 5.I Unknown [1066] none YPO1624 GTGAACAAATCAATGTTAGCCGGTGTGG 70 46 TTACGCTCGGTTGTTCAGCACCAGT 69 52 540 ycfJ putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1625 GCGTGATGAGATCCAGCAATTCTCG 70 52 CAATGCAGATCGCTTTGCAGCAATT 70 44 255 mfd transcription-repair coupling factor Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO1626 ATGTATCAACCTGTCGCCCTATTTATCGGC 71 47 TTACTCATAGCGTAAAGCCTCTGCGGGT 69 50 255 lolC lipoprotein releasing system; transmembraneprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1627 TAATCATCCTTTATTACAATGTATAAACCTGTGCA 65 29 TCACTCGGCCCCCACCAGC 71 74 705 lolD lipoprotein releasing system; ATP-bindingprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1628 ATGGGGGTTTCGCGACTTTCACTT 69 50 TTACTGCCCGCTGAGGACCCG 70 67 255 lolE lipoprotein releasing system; transmembraneprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1629 ATGTATTACGGTTTTGATATGGGCGGGAC 70 45 CCCCCACCCACCACGACC 69 78 771 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1630 ATGCGCATTCGCCATAGGCTGT 69 55 TCAATCCCCCTGACGATTCTCACC 69 54 837 cobB putative Sir2 family protein Other 5.I Unknown [1066] none YPO1631 ATGGACAAATTACTCGACCGATTTTTCAACTATGT 70 34 TTATGATTCTTTAGCCCGCTTGGCGG 71 50 255 pepT peptidase T Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO1632 ATGGCGGGTATCCGTTATAATCTCAGGC 70 50 TCAATCGTTAAAATACCAATAACCGCTATTGACC 69 35 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1633 CTTCTCCCTTCGAGCCCGTTTTCTTATGGC 74 53 TTAATCATCGTGACAATCTTGTTGCTGACC 69 40 255 phoQ sensor protein kinase Broad regulatory functions 2 Broad regulatory functions [235] none YPO1634 ATGCGGGTTCTGGTTGTGGAAGATAAC 69 48 CTAGTTGACGTCAAAACGATATCCCTGACTACG 70 45 672 phoP response regulator protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1635 ATGTTGAAACAATCCCTATTATCCCTTGCCC 70 42 TTAGAAGTTATACCGTAGGCCGACTTGCATC 68 45 624 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1636 ATGGAATTATCCTCACTGACCGCCG 69 52 TCAACCATGGTGGTGGTGCG 68 60 255 purB adenylosuccinate lyase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism. Alanine and aspartate metabolism none EC:4.3.2.2 YPO1637 GTGGCGAAGAATTATTATGACATTACACTAGCGC 70 41 TTAGGTATGGGCAAGAATGCTCTGTGC 68 48 627 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1638 AAAAAGTCATCGTCGGCATGTCCG 70 50 TTATGCCGGATTAGTCAGTGGGTAACGC 70 50 255 trmU asuE tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] none YPO1639 ATGTTTAAACCGCATGTTACTGTCGCCTG 70 45 TCAGAGCGGCCAGTTAAAGGTCCCTATA 69 50 447 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1640 AATAAATTCTCTGTTAAAAATCACAAAGTTAACCG 65 26 TTAAACATCAGTTATCTCCTTCCATTCGCCG 71 42 627 ymfC putative pseudouridine synthase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO1641 AAAGCAAAGTAGTTGTTCCGGCAGAAGGTAAGAAA 72 40 GTGCTTAATAATGGCGTCGCCAAACTCACTACAC 73 47 255 icdA icd icdE isocitrate dehydrogenase [NADP] Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Glutathione metabolism. Reductive carboxylate cycle (CO2 fixation) none NADP YPO1642 ATGGTCTCACTGAAAGAAGTGGCAAATCTAGC 70 44 TTATCGCTGTTTACTGAAAAGAGGCACACAGTTA 69 38 255 cscR sucrose operon repressor LacI-family Broad regulatory functions 2 Broad regulatory functions [235] none YPO1643 ATGTCATCAATTAACCAAACATCTGTT 61 30 CTAGCGGTTGGCCTTGTCA 62 58 261 none hypothetical protein Other 5.I Unknown [1066] none YPO1644 ATTGAGCGCGATATCACCTTGCAGTCCA 74 50 CTAATCCCTTAACTTTCCTACGTTATTCAATGGGC 69 40 255 aer air putative methyl-accepting chemotaxis protein Cell processes 4.D Chemotaxis and mobility [86] none YPO1645 ATGATCGCAGTCACCGGTGCC 69 62 TTAACGTGTCGCCAGTGTTGCTGTTATTAC 69 43 858 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1646 ATGAATGGCAACATTTCATTTCCGGA 69 38 TCATACTGACCGCTGCTGCCGTT 70 57 384 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1647 TGGTTGTGCCAGCGCCAAC 69 63 CTAACCTCTGGCTGCGGAT 60 58 198 none putative cytochrome B (fragment) Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO1648 ATGTCAGTATTAGAAAATCGTGTACGGCTATCTGG 69 40 ATTACCTTAGCCACTTTCTTTTGGAATGTATCAAG 67 34 255 none probable histidine acid phosphatase Central intermediary metabolism 1.C Central intermediary metabolism [63] Inositol phosphate metabolism. Riboflavin metabolism none EC:3.1.3.2 3.1.3.26 YPO1649 TGGTCAAAGTCTATGATAGAAATAGAAACCAAATT 65 29 TTATAAACCTAGTCTCACTAAATCAAAAGGAACGT 65 31 204 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1650 ATGTGTATTGATAAACCAGAGTCAGATCCGCTG 70 42 TTTTTGTGTCAACGCTTCCAGTATTTTCAGTG 70 37 900 none hypothetical protein Other 5.I Unknown [1066] none YPO1651 ATGGACAAAATTGACGAACAATTGATTGC 69 34 TTATATTTTTATCGGTCGAACTAATGGTGGAAATC 68 31 450 none AsnC-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1652 AAAAATATTAATTGACGACATCGCCAGAATAAACA 69 29 TTATGGACTAATAATGGTATTGCTGACCAGGGAC 69 41 534 ylaC putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1653 ATGACATTGTTAACTCATCTCCCTGCAAACA 69 39 TCAAGCGGTGAGAACAATTTTACCTATGTGTG 70 41 255 none probable Zinc-binding dehydrogenase Other 5.I Unknown [1066] none YPO1654 CCTTTAGGCACCCAAGCCATTGATG 70 52 ACCAGTGCCCATATTGTGCTGCAAG 70 52 255 lacZ beta-galactosidase Degradation 1.A.1 Carbon compounds [66] Galactose metabolism. Glycoprotein degradation. Glycosaminoglycan degradation. Glycerolipid metabolism. Sphingoglycolipid metabolism none EC:3.2.1.23 YPO1655 ATGTCTAACATGATGAAAGGTCAAGTAA 61 32 TTAGATTGCAGTNACGTTTGCTG 61 39 "cspC, msmB" cold shock protein Other 5.F Adaptions and atypical conditions [36] none YPO1656 ATGAAAGTTAATGATCGAGTGACAGTCAAAACTGA 69 34 CTACTGAGAAAGTGGCTCCACAAAGGTGC 70 52 192 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1657 GTGAAGTACGCCACCTGGCGC 69 67 TTAGAAAGTTTCCCAATTCAGTGAACCATCC 69 39 462 none methyl-accepting chemotaxis protein(pseudogene) Broad regulatory functions 2.1 Signal transduction [1] none YPO1659 TTGGAAAATTACGATGGAGAAACT 60 33 TTACCATCGAGTTAACACTTTATTTGG 61 33 171 none hypothetical protein Other 5.I Unknown [1066] none YPO1660 TCATTAACTCCTTTTGTTATGAATTTATTACTGGC 65 29 TCAGGCCGGTAATTCAGATGCAATG 69 48 699 mgtC Mg(2+) transport ATPase protein C Cell processes 4.I Pathogenicity [38] none YPO1661 GTGAGGCGATTCCGGTCGAAAAGTA 69 52 ATATTGCCATGGCAGCGGCTCTAAC 69 52 255 mgtB Mg(2+) transport ATPase protein B Cell processes 4.I Pathogenicity [38] none YPO1662 GTGGATGACCTGCAACAAATCCATACC 69 48 TTTTTAGGCGTACTATCGTCTTTTAACGATAGCTC 67 37 102 flhD flagellar biosynthesis regulatory protein(pseudogene) Broad regulatory functions 2 Broad regulatory functions [235] none YPO1663 ATGGTTGAGAAAAGTATTGTCCAGGAAGCTAAAGA 69 37 TCAAACTGCGCGTCTAACCTGCTCAT 70 50 582 flhC flagellum biosynthesis transcription activator Broad regulatory functions 2 Broad regulatory functions [235] none YPO1664 GTGTTAGTTATTTTGGGTTATCTCGTGGTCTTAGG 68 40 TCATGCGTCCTCTTCCGTCGC 70 62 888 motA chemotaxis MotA protein Cell processes 4.D Chemotaxis and mobility [86] none YPO1665 ATGAAGCATCAGAACCACCCCGTTATTC 70 46 CTACTGTGCGTCGCGGCTTGTC 69 64 255 motB chemotaxis MotB protein Cell processes 4.D Chemotaxis and mobility [86] none YPO1666 GACCCGCTGACACCTGACAATGAAC 70 56 ACGCTACCATCACCCAAAATGGTGG 70 52 255 cheA chemotaxis protein CheA Cell processes 4.D Chemotaxis and mobility [86] none YPO1667 ATGGCAGGACTAGCAACCGTCACG 70 58 TCACGCCTTAGAAACACTATCAATCAACGAC 69 42 498 cheW chemotaxis protein CheW Cell processes 4.D Chemotaxis and mobility [86] none YPO1668 GTGAATAAATGGACAAAGCTTTGCTTCCTCA 69 39 TTAGGCTACAGCTACTGCACGCATTCTTTTT 69 42 255 yihN putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1669 ATGATTATTAAAACTCAAAACGCACCAGCAGCTAT 70 34 ATTTTAGAGAGACAATAGCCTCTACTTCAATGAGA 65 34 378 none YjgF-family lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1670 ATGAAAATTGGTTTAGAGACTGAGTCCTATCATCT 66 34 TCATTCGACGATTCCTGTTGTGGTGTT 70 44 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1671 TATATTAAATAAAGCATTTACTGATGATGATCGGA 65 26 TCACTCACTGACTTTTTGTGCATTTAGCGTT 69 39 666 none putative DNA-binding protein Other 5.I Unknown [1066] none YPO1672 AAATACCGACGGCATCATCCTGAGC 69 52 GTGGCGTTATCCAGCACCAAAATCC 70 52 255 none conserved hypothetical protein Other 5.I Unknown [1066] YPO0765 YPO1673 ACCTACCGTGGCTACTGTTGTGGCC 70 60 CTGCCATGCAGCAGGTGACGTAATT 70 52 255 none putative integral membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1674 ATGTCACCCTTCTTTCTTTCTGCTTGCGTA 70 43 CTAATTCAATGAGACCACACCATAGAAAGCGG 70 44 639 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1675 TGAAAGTGGTTACCAGCCTGCTGCTGGTATTAGTA 73 46 AAGTTTCCCAATTGTCTTGCAGATTATTTCCCAGC 73 40 255 cheD methyl-accepting chemotaxis protein Cell processes 4.D Chemotaxis and mobility [86] none YPO1676 CGCTCGGTGGCGCGTGT 70 76 TCAATTGTCATCCTGGTCGGAACACTC 70 48 345 none methyl-accepting chemotaxis protein(pseudogene) Cell processes 4.D Chemotaxis and mobility [86] none YPO1678 ATGAAACGATCATCAATGAAGTCAGCGC 70 43 TCACCTCTCCTTGGTCAGCCCATAAAC 69 52 888 cheR cheX chemotaxis protein methyltransferase Cell processes 4.D Chemotaxis and mobility [86] none YPO1679 ATGAGTAAAATCAGAGTATTGTGTGTTGATGATTC 65 31 CTATATGCGAAGGGCTTGACCACTACTGATCT 70 47 255 cheB protein-glutamate methylesterase Cell processes 4.D Chemotaxis and mobility [86] none YPO1680 ATGGCGGATAAGAATCTCAGATTTTTGGTG 69 40 TTACATACCCAACTTTTCAAAAATCTTATTGAGCT 66 29 390 cheY chemotaxis protein CheY Cell processes 4.D Chemotaxis and mobility [86] none YPO1681 ATGAATAACCATCCAATGCCCGCA 69 46 TTAAAAACCTAAACTATCCAGCAAATCATCAACCT 68 31 645 cheZ chemotaxis protein CheZ Cell processes 4.D Chemotaxis and mobility [86] none YPO1682 ATGGATGATACACCTCGTCACG 62 50 TTAAATCAACGTGGTGACAGCTATAT 60 35 120 none hypothetical protein Other 5.I Unknown [1066] none YPO1683 TATAATAGTTTTCGTTCAGTAAAAGGATTCAATCG 65 29 ATGGTTTATATTTATCGACTAATGCATAGAGGATC 65 31 765 none probable N-acetylmuramoyl-L-alanine amidase Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO1684 CAGTTTCAGATTCCTTTATCAGAGACAATTCTTTT 67 31 ACCCACCGCCGCCATTGCA 74 68 255 none putative membrane protein (pseudogene) Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1686 ATGCTATCACTCAAAACCACTGGATTGATCA 69 39 TTATTTATGAGAAAGTGCTTCACCTTGTATACGCT 67 34 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1687 ATGCACGTTCGTTTTCGTCATTTATTCTTATTACC 70 34 TTAATCTACCAGAATACGCTTATTGGTTGCGCC 71 42 255 none putative alanine racemase Amino acid biosynthesis 1.D.6 Pyruvate family [17] Alanine and aspartate metabolism. D-Alanine metabolism none EC:5.1.1.1 YPO1688 ATGAAACAGTTTCCTTTTGATAAACGTTACGAGA 68 32 TTAATCTACTGGCGATTGTTCATCCAGAATCG 71 41 249 none hypothetical protein Other 5.I Unknown [1066] none YPO1689 ATGATAACGCGTTGGAAATTAATTCGCTCC 70 40 TTAATCCGCTGGCATTTGGTTAGTCTGTATTG 70 41 255 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1690 ATGAAAAAAGTCTCAATCATTGCTC 60 32 TCAGTGATTCCATAATTCTTGGATC 61 36 234 none hypothetical protein Other 5.I Unknown [1066] none YPO1693 ATGGCTACACTCCCACAGAAATATGAAGACG 70 45 TCAGAAGGTTTCCAGTACTTTAAACTTCATACAGA 66 34 390 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1694 ATGGGGAAAAGCATCGTAAAAATCAGGC 70 43 TCAGGTTACCTTCATAACCCAGGCATCTTG 70 47 240 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1695 ATGTTATCCATCACCAGAGAAATCACAACCATAAC 69 37 TCAATATTCCAATACAACACTCACATTATCTTGA 66 29 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1696 GGCACCCGAGATTGCCATTGATAAT 69 48 GCACTGCCTTTCGGTAAGTCTTGGC 69 56 255 none probable outer membrane usher protein Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO1697 TAAATTGATATTATCCTTTATTTTGCTACCCATCG 66 29 TTACTGATATGGAATAGTTACTGGTTTGGTGTTGC 68 37 753 none putative chaperone protein Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO1698 ATGATAAGTCTTTTTTCTCCATGTCAC 60 33 TCAGTAAGTGACAGTAACCAATAACGTATC 61 37 558 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1699 GTGAAAAATCACACTCTTGTTGTATTCAGTTTAAG 65 31 TTACCAACTCACCGTGACCTGAACGGTAT 70 48 531 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1700 ACTTTAAGTGTAATAGCCATATTACAGACAGCACC 65 37 ACGATAACAGTATCAATATAAGTACTGACACTGGG 65 37 555 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1701 GATGCGCTGGTGGGCGGTAATTATA 70 52 TGCACCCAGATTAAAACCGGTGACA 70 48 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1702 ATGAATTCACCTGTTTCGCCCGATTAC 69 44 TCAGTCGGTGTACTCGGTGTTTCCTGTT 70 50 255 yebS putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1703 AAAAACAGAATTCTACGCGGAATTAAAACGTGA 70 33 TCAACTTGCAGTCTCTGTGACATATTTGGC 69 43 498 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1704 TTGCGTTCTGCGCTGCGTCT 69 60 TCAGAACTGCAAGTGTTCTGCGCG 70 54 546 proQ ProP effector homologue Other 5.I Unknown [1066] none YPO1705 GCTTGTTACTGGCTGGGGCGAGTTA 69 56 CGAGATGCAATCTGTGGCTGAGCTT 69 52 255 prc tsp tail-specific protease precursor Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO1706 ATGATGCGTATCGCTCTGTTCCTTCTCA 70 46 TTACTTCAGATACTGACCAGAACGTAATGCCTCT 68 41 882 htpX putative heat shock protein Other 5.F Adaptions and atypical conditions [36] none YPO1707 GTGAAAATTAAATCAAGCAATGTGTTAA 61 25 TTAATCATAAACGATAGTATAGTCGACATTCG 63 31 543 none putative fimbrial protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO1708 GTGCGACTCTTAACGACACTGACACTCTTAATATT 68 40 TTATTGGGTCAGTTTTTGCGTACCTTGAGTTT 69 37 738 ecpD putative chaperone protein Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO1709 CTGCCGCCGAGAATTCTGAATACGT 70 52 TATCACCCAGTGCAGGGGCCAATAT 70 52 255 htrE putative outer membrane usher protein Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO1710 ATGAGTGCTTATTTCTATAGGGTGAAAACAGTGA 67 35 TCATTTATAGATCAACGTAAATGTGAACTCACCTT 66 31 255 none putative fimbrial protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO1711 TTGTCTTTCACTCTGGTACCTAAAGGGGAGG 70 48 CCCTTCAGTGGGTGAGCCAAAATCAT 70 50 258 none putative chaperone protein Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO1712 AAGTGATGGCTTACCTGTACCTCAACGCTATGCC 74 50 TTTTTGTGTTACACGTAAGAGACTCACCAGTGC 70 42 255 none putative transport protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1713 CAAATCCCCCTGACATATCACACTTATCAGG 70 45 CTATTGCCAAACAGACTCAGGCAATGTCA 70 45 255 ogl oligogalacturonate lyase Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] Pentose and glucuronate interconversions none EC:4.2.2.6 YPO1714 ATGGCTATTGCAGATCTAGATAAACAGCCCG 70 45 TCAGAAAGGATAATCGCGGTAACCCATTT 70 41 792 kdgR IclR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1715 GGGGGCTATTATTGTTGCTGGCCG 71 58 TCAAGTGCTAAGGGTACGATATTTTTCAACTAATG 67 34 852 ybjR b0867 probable N-acetylmuramoyl-L-alanine amidase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Peptidoglycan biosynthesis none EC:3.5.1.28 YPO1716 ATGAATTTACCACTTGTGGTTAATGTGCTGGTATT 69 34 TTACTGGTGAGTCAGAACGTCGTCATCTTC 69 47 255 gltP putative transport protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1717 ATGACAGGGGAAGGACACCTTATTTTT 65 41 TCATAACCTAAAGCTTTTCAATTGTTCCATATAGT 65 29 549 ydjM putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1718 ATGAAATTAAAATTAATTACTCTGGCAGTGGCAGC 69 34 TTAGAAACTGTATTGGATACCTACGCGGTAACGA 70 41 711 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1719 AAAAAGCGATCCTACACACGCTAATAGCATC 69 42 TTAACGCATTGCACGTTTAAGAATACGATCAC 70 37 255 none putative sugar-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1720 ATGGCTGAAGTCATTTTCAATAAATTAGGTAAAGT 66 29 TTTTTCTGTTTTTGCATCAAAGATATGGCATTT 69 27 255 none putative sugar ABC transporter Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1721 ATGACTGACGTACAACAAACTTCCAACCAGA 69 42 TTAACCTTTAATTCCGCTGCTGGTTACGC 70 45 255 none putative sugar ABC transporter (permease) Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1722 ATGAATGAAAACAGAATGCTGGGGTTAGCCTATAT 70 37 TTTTTCCTCCTTTATCGGCGGAGTAGAAGA 70 43 891 none putative ABC sugar transporter (permease) Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1723 ATTAACTGGCTCAGCGCTATCCGCAGCTATG 74 52 GATTCAAAAGTGTCGGATAAATAAAATCGATGTCA 69 31 255 pelW kdgC exopolygalacturonate lyase Macromolecule metabolism Degradation of macromolecules 3.B.4 Polysaccharides [13] none YPO1724 ATGAAATCGCGGTCATCGTTGAC 67 48 TTATCGTGCTAACCAACCGCCATCA 69 48 807 kduD1 2-deoxy-D-gluconate 3-dehydrogenase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions none EC:1.1.1.125 YPO1725 TTCATAGCGACCACGCTAAGCAACTCG 71 52 TTAACGCAGTTCGCTAACAGCTATATGGTCC 69 45 837 kduI 4-deoxy-L-threo-5-hexosulose-uronateketol-isomerase Macromolecule metabolism Degradation of macromolecules 3.B.4 Polysaccharides [13] Pentose and glucuronate interconversions none EC:5.3.1.17 YPO1726 ATGAAAATGTTCTTTATCAATGATGAAAC 61 24 TTACACAATATTGTTTACAGTCTCAAAATCA 61 26 kdgF pectin degradation protein (pseudogene) Macromolecule metabolism Degradation of macromolecules 3.B.4 Polysaccharides [13] none YPO1728 ATGATAAGTTGGATAGTTATCGAACTCG 61 36 TCAGGAGAGCAGATTACCCCC 63 57 none putative transcriptional regulator of sugar transport (pseudogene) Broad regulatory functions 2 Broad regulatory functions [235] none YPO1732 ATGATTAAATGGCTGTGGAAAGCAAATAAACC 69 34 CTAACGGTGCGAGTGAGTATTCTCGGG 70 56 813 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1733 ATGTTTATTGTTAGCTTGACCTACCATCAACCT 67 36 TCACAGTGACTTCAGTGCTTCGACCG 70 54 285 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1734 ATGAAAATTCCAAAACGAATCCAACCG 69 37 TTAGTTGTTGTGCTCTTGAGCCTCGC 68 50 852 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1735 TATAAAGGGCTTTTCTTCCTAGATTTTGGTTGCGC 72 40 GTGCCAGTAACTCGTGATGATCCCCTTGTTCAATA 74 46 255 none putative ABC transporter (ATP-binding protein) Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1736 GTGGAGACGAGTTTGTTTGATGA 61 43 TCAGTCCTCTTTATAACAGTTCTGCA 61 38 165 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1737 ATGTCACAAGAAAATCATCTCGC 61 39 TCAGGCCTGTTTTTGGTGA 60 47 387 none AraC-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1738 TGTCTGAAATGTTAACTAATGACCAAGAATTAGTC 65 31 CTATTTTTGTGTAAATTTCAGATCAATCAGTGCAA 67 29 240 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1739 TTGTTTTTGGTGGCTGCGA 64 47 TCATTCAAAGACATTGTTGCCG 63 41 219 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1740 ATGTTGGATACAAATATGAGCGC 60 39 TTATCGCTCTGGAATAAAGCCTT 61 39 276 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1741 TGATTAAATGGTATGAAGAAAGTGATAGTGAAGTG 65 31 CTACACTTCCTGGCTGAGTAGATAACAGATCATCG 70 46 300 none hypothetical protein Other 5.I Unknown [1066] none YPO1742 TTGTATCGTACTGACAGGAAGTCG 61 46 TTAGGGTAATAATGCTGATACTCCACA 61 37 312 none hypothetical protein Other 5.I Unknown [1066] none YPO1743 ATGGAACAGCAGTTACAGAACTCATCGTTAAAAC 69 38 TTTTGGACACTTACGCCGAGTAAGTACAAAACCAC 72 43 255 aroP aromatic amino acid transport protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1744 ATGAATTATAAGGACATTATCAACGCCTGCATTCT 70 34 CTAGCGAATCCAGGTAAACAACACATTCCC 70 47 600 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1745 ATGTGTGGCATTTTCAGTAAAGAAG 61 36 TTACATAGACAAACTAGAGTCGTTACTGCT 61 37 117 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1746 ATGGCAAAGATCAAAGGTCAAG 60 41 TTAGATTGCAGTAACGTTTACTGCA 60 36 210 "cspC, msmB" cold shock protein Other 5.F Adaptions and atypical conditions [36] none YPO1747 ATGACCGATTTTTCACCACGACTCAGTC 69 46 TTAAGGCAAGATGACCACTCCCGAATATTG 70 43 756 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1748 ATGCCAGTACAGCATAAAGGCTCCAAACA 70 45 TTAAATATCGTTCTGAGGATTGTCTGTTTTACGAC 67 34 729 rrmA rRNA (guanine-N1-)-methyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.1 rRNA and stable RNAs [3] none YPO1749 ATGCCGTACTTTACGGTTAGTGTCGTTTTACATAA 69 37 TTATTTTAGGTCCAGATTTCGCCAGGTTCTACC 70 42 279 none hypothetical protein Other 5.I Unknown [1066] none YPO1752 TATACCCGTGAGGAGATAATCGGT 62 44 TAAAGAGCACAATCGCAAATTCAT 62 33 ~1400 none hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO1753 ATGGTAACCCATCACAGAATTACC 60 42 TGTTCGCCATAGAAACCATAAGTA 60 38 1402 fcuA ferrichrome receptor protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1754 ATGAATCTATCTGCAACAATTATTCTCGCTTTTGC 70 34 TTAGGCAGTAAGGTGCATATGTTCATACAGAA 67 37 570 yebN putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1755 ATGTCGGTTACTGATCTTGTTTTAGTTG 62 36 TTATGATTGATTTTCAATGAAAAAATTATATATT 60 12 462 yobD putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1756 ATGGTTGATACAACAACTGTTGATACAACAACTG 68 35 TTATGGTGCCAAGAAGCCAATCCAGTAG 69 46 879 manZ ptsM gptB PTS system; mannose-specific IID component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] Fructose and mannose metabolism none EC:2.1.1.51 YPO1757 ATGGAGATAACAACTCTTCAGATTGTGCTGATATT 67 34 CTAGTCTAATTCGTTATCAAGATCGTTATTGGCCG 70 40 798 manY ptsP pel PTS system; mannose-specific IIC component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] Fructose and mannose metabolism none EC:2.1.1.51 YPO1758 GTGAGTATAGCTATTATCATCGGCACACATGGG 70 45 ATTTAATTTACTAATCAAATCCATCATTTTGAGCC 66 26 255 manX ptsL gptB PTS system; mannose-specific IIAB component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] Fructose and mannose metabolism none EC:2.7.1.69 YPO1759 ATGCGTTTGGGGCTGTTGTCG 69 57 AACTCATTACTCAGCTTGGTAATGCGCACCAGCT 74 47 255 yoaE putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1760 ATGCATGAATCACTGACCATCGCATTATT 69 38 TCACTCTTCATCTTCTAACATCTCATTTTCTGACA 68 34 468 hpcR hpaR homoprotocatechuate degradative operonrepressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO1761 ATGAAAGGTACCGTATTTGCCGTTGCAT 70 43 TCATGGCCAACTTCCTTGCTGGA 70 52 633 hpaG hpcE 4-hydroxyphenylacetate degradation bifunctionalisomerase/decarboxylase (pseudogene) Degradation 1.A.1 Carbon compounds [66] Phenylalanine metabolism. Fluorene degradation none EC:5.3.3.- YPO1763 ATGAAGATTGTTAACCATTGGATTG 60 32 TTACATCCCCCAACGGGGG 67 63 1398 hpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase Degradation 1.A.1 Carbon compounds [66] Tyrosine metabolism none EC:1.2.1.60 YPO1764 ATGGGAAAATTAGCATTAGCAGCAAAAATCAC 69 34 TTACCCGTAAACGGCCAATGGGAATA 69 46 858 hpaD 3;4-dihydroxyphenylacetate 2;3-dioxygenase Degradation 1.A.1 Carbon compounds [66] Tyrosine metabolism none EC:1.13.11.15 YPO1765 ATGGCGCATTTCTACGCAGAATGTACTG 70 46 CTAACATGCAGAGGTTCCCTGTTGGAAC 69 50 399 hpaF 5-carboxymethyl-2-hydroxymuconatedelta-isomerase Degradation 1.A.1 Carbon compounds [66] Tyrosine metabolism. Phenylalanine metabolism none EC:5.3.3.10 YPO1766 ATGTTAGCTCAAAAGACGATTATCCAA 62 33 CTAAACAAAGTGGCAACTTATGGC 61 42 "hpaH, hpcG" "2-oxo-hept-3-ene-1,7-dioate hydratase" Degradation 1.A.1 Carbon compounds [66] Tyrosine metabolism hpaHhpcG EC:4.2.1.- YPO1767 ATGTTTCCATTAACAAATAAATTTAAACAGGCACT 66 26 TTAATATCCACCCGATGGTGCAAGC 68 48 807 hpaI hpcH 2;4-dihydroxyhept-2-ene-1;7-dioic acid aldolase Degradation 1.A.1 Carbon compounds [66] Tyrosine metabolism none EC:4.1.2.- YPO1768 ATATTAACCCTGTCCGTATCGAGGACATTATCATG 70 40 GGTGCCTTTTTCATTGGAATCATCAAGAAAATAA 71 32 255 hpaX putative 4-hydroxyphenylacetate permease Degradation 1.A.1 Carbon compounds [66] none YPO1769 ATGAAGCCAGAAAATTTCCGAGCGAAT 69 41 TCCATTGGTGCGACAAACATCAGC 70 50 693 hpaB 4-hydroxyphenylacetate 3-monooxygenase Degradation 1.A.1 Carbon compounds [66] Tyrosine metabolism none EC:1.14.13.3 YPO1770 ATGTCAACAGAAAATCAACATCATCTGTGTTTTCG 71 34 TTACACCATCACCGGGTGAAAATGG 69 48 498 hpaC 4-hydroxyphenylacetate 3-monooxygenase couplingprotein Degradation 1.A.1 Carbon compounds [66] Tyrosine metabolism none EC:1.14.13.3 YPO1771 ATGTTTAAGATTGGTATCGGTCCGTCCAGCTCT 72 45 TCAAGTACACTGCACTTTAATCGCCAGGC 71 48 255 sdaA L-serine dehydratase Degradation 1.A.2 Amino acids [23] "Glycine, serine and threonine metabolism. Cysteine metabolism" none EC:4.2.1.13 YPO1772 GTGTGTTATTTCGTGAGTGAATTAATTACTGGGCA 70 37 TCAAATACTGACTTGCTGCGCCAGATG 70 48 612 none MutT-family protein Other 5.I Unknown [1066] none YPO1773 ATGGAAATTATTGAACAACTCGAACCCTATCGA 70 36 TCACGAAATAACACACTCCCCCAGTTG 69 48 249 pabB para-aminobenzoate synthase component I Biosynthesis of cofactors; prosthetic groups and carriers 1.G.2 Folic acid [9] Pyruvate metabolism. Folate biosynthesis none EC:4.1.3.- YPO1774 ATGCTAGCGGGTATGCCTTCACTTTCC 70 52 TTAGCCCTCATACGGGTCTTCAATGTCA 69 46 258 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1775 ATGCTAACCATTGGAACCGCTCTGC 69 52 TCATTCCCCACTGACCTCAATGTTTCC 70 48 255 purT phosphoribosylglycinamide formyltransferase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] "Glycine, serine and threonine metabolism" none EC:2.1.2.- YPO1776 GTGAGCACAACTTCCTTTTCTTCCCTGAC 69 48 TTTTAATAGACGGGCTTTACAGTTTTTACCTTTGA 67 31 255 dbpA ATP-dependent RNA helicase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO1777 ATGGCCGTTGAAATAAAATTCGTCGTG 69 41 TTAAGCGGCTTGATTTTCTTCAGGTTTACTTTTC 69 35 321 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1778 TTTTTGGCCGTTTTGAAGCCGA 69 45 TTAACACCGCGTAAATTCAATCACGTAAAACC 70 37 309 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1779 ATGCGTGGAGGAGTGATGAAAAAGACAG 70 46 TTACTTCGGCCCGGCTTGGCTAT 70 57 426 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1780 ACTCCCCCAAAAGCAGATAAACGCC 69 52 GCTTTGAAGCGACCTGATTTACCGC 69 52 255 ptrB rlp oligopeptidase B Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO1781 ATGGAACAATTACGTGGACTTTATCCTGCATATG 70 38 CAGTGAGCAAATTTATCAGTAGCTAGAATAAGTTG 65 34 255 pip proline iminopeptidase Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] Arginine and proline metabolism none EC:3.4.11.5 YPO1782 ATGGGATATAATTTGGTAGAGCTTTCT 60 33 TTACTTCACTTTAGGTTCATACGGCA 62 38 231 holE "DNA polymerase III, theta subunit" Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] DNA polymerase none EC:2.7.7.7 YPO1783 AAAAAGAAATGGCACAAAAACTCAATGAGCA 70 32 TTAAGCTGACGTGTAGCCTTGGGCC 69 56 510 ftnA ftn rsgA gen-165 ferritin Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1784 ATGTTTATTCGTAAAGTACGCTCATCTTGCCG 70 41 CTATTTCACAGTGAAGCTGTAAGTGCCTTTCGT 70 42 387 none putative copper resistance protein Cell processes 4.G Detoxification [10] none YPO1785 ATGTCTTTGGCGACTCTATTCATTCTGTGTC 68 42 CTATACTGGCGCCATTGTGGCAAAAATAC 69 45 885 none putative copper resistance protein D Cell processes 4.G Detoxification [10] none YPO1786 ATGAAAGGTTTTGTGCTAATGCTGTCGCTATT 70 37 TTACTGTTGGCAAAGCGCCATTGC 70 50 342 yebY putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1787 TTGTATTTCTTCTCTCCGTTCGA 60 39 TTAATTGCCCAGTTTCGCTTT 61 38 231 none hypothetical protein Other 5.I Unknown [1066] none YPO1788 ATGGTAGATGATATTGAACAACGAATT 60 30 TCAGTCATACAACCAGCGACC 61 52 327 none putative acyl carrier protein Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO1789 ATGGATACAGTTGAAGAGCTGGG 62 48 CTACCATAGCTTATCGCCCCC 62 57 459 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1790 GTGGCTGAAGATAGCGATCAGGAAAAA 68 44 TTAGTCTGTCTCACTCTTTGTCTCACTCTCTGTTG 68 43 255 flhB flagellar biosynthetic protein FlhB Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO1791 ATGGCTAATTTGGCCGCCCTG 69 57 CTACTGCCACAGGCTGCTGTGTTTGTT 70 52 255 flhA flagellar biosynthesis protein FlhA Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO1792 ATGTTGATTCGGGCCTCCCACC 70 59 TTAACGATAATTGACCAACACCTGATTACTGATCA 69 34 423 flhE flagellar protein FlhE precursor Cell processes 4.D Chemotaxis and mobility [86] none YPO1793 ACACCCCCGTGCCTCTACTCACTGT 70 60 TTATATTGACAGCGCACAGAGCGGG 69 52 255 inv invasin (pseudogene) Cell processes 4.I Pathogenicity [38] none YPO1796 GTGGTGGTGGAAAGTTTACAAACCAATCTG 69 43 TTAAATGCCGATCTTACGGCCCAGTATATTG 70 42 444 flgN flagella synthesis protein FlgN Cell processes 4.D Chemotaxis and mobility [86] none YPO1797 ATGAGCAGTATTGATCGCACTCAACCG 69 48 TTAATGATTCTTAAGCTCATCCGCCACGTT 70 40 303 flgM negative regulator of flagellin synthesis Broad regulatory functions 2 Broad regulatory functions [235] none YPO1798 GTGACGCTGGGGAAAGCCCTG 70 67 CTATAACATAATCCGAATTGTGCCATCGTCAG 69 41 756 flgA flagella basal body P-ring formation proteinFlgA Cell processes 4.D Chemotaxis and mobility [86] none YPO1799 ATGCTCGACAAACTGGACGGTGCT 70 54 TTATCCTTGTTGTAACACTGACATCATCCCTTTAA 68 34 414 flgB flbA fla FII flagellar basal-body rod protein FlgB Cell processes 4.D Chemotaxis and mobility [86] none YPO1800 ATGTCTTTACTGAATATTTTTGATATTGCCGGTTC 68 31 TTATTGACCCAGTGTCAGCGTTTTGAGC 70 46 405 flgC flaW fla FIII flagellar basal-body rod protein FlgC Cell processes 4.D Chemotaxis and mobility [86] none YPO1801 ATGGCCATTACCAATTCCCTGACGG 71 52 TTATAAAATCTGGCGCACTTCATCCAGC 69 43 678 flgD flaV Fla FIV basal-body rod modification protein FlgD Cell processes 4.D Chemotaxis and mobility [86] none YPO1802 GCTTTTCTCAAGCAGTTAGCGGTATGAACGCA 74 47 TTAACGCAGGCTAACCAGAGTTTGTAAGATCTG 69 42 255 flgE flaK Fla FV flagellar hook protein FlgE Cell processes 4.D Chemotaxis and mobility [86] none YPO1803 ATGGATCACGCAATATATACCGCAATGG 69 43 TTAAAGCCATTGGTGCTCACGTTCG 69 48 630 flgF flaX fla FVI flagellar basal-body rod protein FlgF Cell processes 4.D Chemotaxis and mobility [86] none YPO1804 GTGAGCACCAATGGCTTTAAACGTCAG 69 48 TTACAGCTGAGCCAGTTTTTGCAACATCT 69 41 699 flgG flaL fla FVII flagellar basal-body rod protein FlgG Cell processes 4.D Chemotaxis and mobility [86] none YPO1805 GCATAAACCACTGGTGGATGGCACC 71 56 TTAGTACGGCGAAACATTAAGGAAGAACCG 69 43 654 flgH flaY fla FVIII flagellar L-ring protein precursor Cell processes 4.D Chemotaxis and mobility [86] none YPO1806 ATGCGTAAACAGTCACTTGTCACTCTACTTATGGT 68 40 TTAGATAATTTCCAATTTAGCCCGCAAGCAA 70 35 255 flgI flaM fla FIX flagellar P-ring protein precursor Cell processes 4.D Chemotaxis and mobility [86] none YPO1807 ATGAGTGATTTACTGGCGATGTCCGG 69 50 TTAGAAGAGTTGGCTCAAATCACTCCCCC 70 48 255 flgJ flaZ fla FX flagellar protein FlgJ Cell processes 4.D Chemotaxis and mobility [86] none YPO1808 TTTAATGAATACGGCAATGAGTGGTTTGAACGCAG 74 40 AGGACCTGTGCATTCGCCAAATAATATTGCTG 73 44 255 flgK flaS flaW flagellar hook-associated protein 1 Cell processes 4.D Chemotaxis and mobility [86] none YPO1809 GTGTTACTAAAAGGAACTGACATCGTGCGTTTAAG 69 40 TTACGTATTCAACTGGAACAGAGACAAACCCTG 70 42 255 flgL flaT flaU flagellar hook-associated protein 3 Cell processes 4.D Chemotaxis and mobility [86] none YPO1810 AAAAACCACGCCAATAATATGAAGAACCGG 70 40 CTACGGGGTCTTCGCACGGGT 69 67 255 none putative transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1811 AGCCTCTTATGAGCGAATGATTAC 60 42 GATGACGTTACCGGTTGATTTAT 59 39 1399 none putative oxidoreductase Other 5.I Unknown [1066] none YPO1812 ATGAAAGTTCAAACACGAATGGGCTGC 70 44 TCAGCGCACGGGGGATTG 68 67 255 none putative sugar transport system permeaseprotein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1813 ATGATGATTAAAAAGTTGTGTCTCATTGCCG 68 35 TCAGAATGGGTATTGCTGCCAGTTGG 70 50 255 none putative sugar-binding periplasmic protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1814 GACGTTTCCATAGACCAACGCGCCAT 72 54 CCCTCATCGGCGATCTGTGCTTGATAG 72 56 255 none putative sugar ABC transporter; ATP-bindingprotein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1815 ATGGTTATTGATCTCCCCGCTCACTCG 71 52 TTAGCGATACTTACGCCAACCAAAGGC 69 48 255 none putative sugar ABC transporter; permease Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1816 ATGTCAAAAATTGTCAGCCTGGGGATTC 70 43 TTAAGTCTCTTGGGCAATGGGTAAGGTTTC 69 43 255 none putative sugar kinase Other 5.I Unknown [1066] none YPO1817 ATGGCTATCTATCCCGCCTATGTTCACG 70 50 TTACGCCAATTTCTGTAATTCTTTACGTGCTG 69 37 420 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1818 TTGCATCACGATTATCAACGC 62 43 TTAACTAAGGTTTGCATCTTTCAGAATT 61 29 369 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1819 GTGGATGCTGAACTTGATCCTGGACTATATG 69 45 TCAGTTTGCCATGCCGCTTAATACCTC 70 48 855 fliR mopE flagellar biosynthetic protein FliR Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO1820 ATGACGTCCCATCGCCCTGTTTTTA 70 48 TCAGCTATAAAAACTCTGTGCCAGTGAACCC 70 45 825 fliP mopC flagellar biosynthetic protein FliP Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO1820a ATGACTCCAGAATCAGTAATGGCT 60 42 CTAGCCAATCAACGTGGGC 62 58 270 "fliQ, mopD" flagellar biosynthetic protein FliQ Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO1821 ATGACTGCAGCTGCACCGACCTC 70 61 TCATGCCGATTTTTCCGGATGTTTC 70 44 537 fliO mopB flagellar protein FliO Cell processes 4.D Chemotaxis and mobility [86] none YPO1822 ATGAGTGACCCTAAGTTTCCGTCTGCTGAT 70 47 TTAGCGGCTCAAACGGCGCATA 70 55 417 fliN motD flaN flagellar motor switch protein FliN Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO1823 ATGGGCGATAGCATTCTTTCACAAGCA 70 44 TCATTTGGGCTGTTCCTCACTCAGAG 68 50 255 fliM fla AII fla QII CheC2 flagellar motor switch protein FliM Cell processes 4.D Chemotaxis and mobility [86] none YPO1824 ATGTCTGATAATACCTTCCCGGCCAAGC 70 50 TTATCGCAATATGAATGCGGTAAACAGCA 69 38 471 fliL fla AI fla QI cheC1 flagellar protein FliL Cell processes 4.D Chemotaxis and mobility [86] none YPO1825 CCTATTGCCCGCTGCGGCGAC 74 71 TTAGGCGAAGACATCAACACCGCC 70 54 255 fliK flagellar hook-length control protein FliK Cell processes 4.D Chemotaxis and mobility [86] none YPO1826 ATGAAAAGTCAGTCACCTCTCGTCACCTTG 70 47 TCATAAATTAAGACTCCTTTGTGAGGCGCG 70 43 447 fliJ flaO flaS flagellar protein FliJ Cell processes 4.D Chemotaxis and mobility [86] none YPO1827 ATGCTGGCGGCTGTAAAGTCAGC 68 57 GGAAATAAAACCTTCAAATGCTGGCAGGCATC 73 44 255 fliI fla AIII flaC flagellum-specific ATP synthase Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none EC:3.6.3.14 YPO1828 ATGTCTGATCGGATTAACGCCCTGC 69 52 TCACAGTTCCCCCGGCGC 70 72 717 fliH fla BIII fla AII.3 flagellar assembly protein FliH Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO1829 ATGAGCCTGACCGGAACTGAAAAGAGC 71 52 TCAGACATAGATATCCTCGCCGCCG 70 56 255 fliG fla BII fla AII.2 flagellar motor switch protein FliG Cell processes 4.D Chemotaxis and mobility [86] none YPO1830 AATCGTGAGAACACGTTTACGATGACACTAGCACG 74 46 CACAACACGTGGGTCTTTATCCGCCAGTTC 75 53 255 fliF fla BI fla AII.1 flagellar M-ring protein Cell processes 4.D Chemotaxis and mobility [86] Type III secretion system none YPO1831 ATGTCTGTTCAAGGTATCGAAGGGGTTTTACA 70 41 TCACACACCCATATTCATGACTTCTTGGTAGG 70 44 312 fliE flaN fla AI flagellar hook-basal body complex protein FliE Cell processes 4.D Chemotaxis and mobility [86] none YPO1832 ATGCAGTTGATTAGATATAGCTTGAGC 61 37 TTACACCTTAGAAAGTTCTTCCATTGC 62 37 306 none hypothetical protein Other 5.I Unknown [1066] none YPO1833 ATGGCAGATATTGTTGAAGGGA 61 41 TTATTCTATCTTTACCTGTGTTGCAGTC 60 36 477 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1834 GTGTTCTATACCTACGGCGAAACAGAAATAAATCA 69 37 TCAATCCTCCAGCGTTTTGTGTGACA 70 46 612 none putative glycosidase Other 5.I Unknown [1066] none YPO1835 ATGAGGTTTGAAGTGCTAAAACGTGAAAAAGAAA 69 32 TTAGGCCGATTCAGGCAGCGAG 69 59 906 none putative chemotaxis protein (pseudogene) Cell processes 4.D Chemotaxis and mobility [86] none YPO1837 ATGAAACATAAAATCAGTTTCTGTCCCGGTGT 69 37 TCAGGAATATGAGGGCTTAAGGTAACGATTAACTG 69 40 876 none putative AraC-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1838 TTGGCTACATTCAATAACTCGAATT 60 32 TTATTTCATAGTTTGACTTGATAATATTTTTACG 61 21 240 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1839 ATGGAACGTCACCAGCATCTTTTGTCC 70 48 TTATTGTGTTTCACCCAGCAGCAGTGC 70 48 363 fliT FliT Cell processes 4.D Chemotaxis and mobility [86] none YPO1840 ATGTATAAGCGATCTGGAAGTCAGGCTTACG 69 45 CTAATTGGGTTGATAATTCGGGCCGA 69 46 399 fliS flagellar protein FliS Cell processes 4.D Chemotaxis and mobility [86] none YPO1841 ATGGCAAGTATCAGTGCATTAGGTACCGG 69 48 TTATGAATCAAATTGTTGTGTTAAGAAACTGGCTG 69 31 255 fliD flbC flaV flagellar hook-associated protein 2 Cell processes 4.D Chemotaxis and mobility [86] none YPO1842 ATGGCGGTAATTAACACAAACAGCTTGTCC 70 43 TTAATTCAGCAGAGACAGAACAGTCTGTGGAAC 69 42 255 fliC flaF hag thermoregulated motility protein Cell processes 4.D Chemotaxis and mobility [86] none YPO1843 GTGAGTGATTTGTATACCGCCGAAGGC 69 52 TTAAGCGTCGTTATTTAGGCGGGCG 70 52 723 fliA flaD RNA polymerase sigma factor for flagellaroperon Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO1844 AAAAACGGCCGCTGAGCCGT 70 60 TCAATAGTTCTTTTGCCATGCCAAATACTGATC 70 36 510 fliZ putative alternative sigma factor regulatoryprotein Other 5.I Unknown [1066] none YPO1845 ATGATTCATCAATTCCTTGGGGG 65 43 CTACACCTGCGGATGATAAGCAAACAGC 70 50 255 YedO putative deaminase Other 5.I Unknown [1066] Propanoate metabolism none EC:4.1.99.4 YPO1846 ATGAGCTTTTCAATTGTACGTCGCCG 69 46 TTATTGAGTCACGTCCGCACCAAAGTATTTC 70 42 801 fliY putative cystine-binding periplasmic protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1847 TTGCGGGCGGCGATTTCAT 71 58 TTACTCCTGATCCTGGCGATTAACATGTG 69 45 345 yecS putative amino-acid ABC transporter (permease) Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1848 AAAAATTGACCAAGCAGTTTAAGGGTCAACAG 69 37 TCAGCAGTCTGGGTTATTCAGGAATTTATCAAG 69 39 762 yecC putative amino-acid ABC transporter (ATP-bindingprotein) Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1849 TTTTTACACGGGGTCAACAACTCGCA 70 46 TTACAAAAATGCTTCAAGTTTGAGGCGATG 69 37 339 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1850 ATGAACTGTGTACAACAACCAACAG 60 40 TTAACTTCTCCTTAGCGCAGTCC 61 48 336 none hypothetical protein Other 5.I Unknown [1066] none YPO1851 GGTGACGCGCTACCGGTTATCAAC 69 58 GCCGATAGTCATCAGACTGGCGTTG 69 56 255 putA poaA bifunctional PutA protein [includes: prolinedehydrogenase and delta-1-pyrroline-5-carboxylate Degradation 1.A.2 Amino acids [23] Glutamate metabolism. Arginine and proline metabolism none includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate [EC:1.5.99.8 1.5.1.12 YPO1852 ATGAGGCAGCCGTCGATTA 62 53 TTAATATATTTCGCCATCTTTAATACATTTC 60 23 198 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1853 CCATGAATACGCCGATGCTGGTGACATTTTTA 74 44 GTTTTAAACTCCGCCTCGGCTTTATGGAAACG 74 47 255 putP proline permease Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1854 ATGTTCGTCCCATTTCTTATTATGTTTCGTGAAG 69 35 TTATGGATTAATTTTCCGCGCCGC 69 46 849 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1855 ATGTCTATTTGGTTCTTCCGTCGCACAG 69 46 TCAATCCAGACCTAATACACCACGCAGTTG 70 47 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1856 ATGAGAGACAAAACCGGCCCGAA 69 52 TTAAGCTTCGAGCAGGCTTTGTGCC 70 52 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1857 ATGGCGAAAATTTTAGTACTCTATTATTCCATGT 65 29 TCAACCCTTCAGCTTGGCCGTAATTT 69 46 600 wrbA trp repressor binding protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1858 ATGACCCAGTTATACCCACAATATAAGAAACAATT 66 31 TTACTCAATATGCAGTTTTCCTCCCTGCC 69 45 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1859 ATGGGAAAGATGGTAGACCAATCCAAAATAGTG 70 39 TTTTTCAGGAAGATATAGCTGGCAGTCAAAATGAC 70 37 255 cycA dagA D-serine/D-alanine/glycine transporter Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1860 ATGAAAAATAAAACCACATTGGCTGCATTTATAAC 68 29 TTAAAAACGATAGCCAATGCCTAAAACCCA 69 37 552 ail attachment invasion locus protein Cell processes 4.I Pathogenicity [38] none YPO1861 TTGCCCGCTGAGAATGGCC 69 63 TCACTGTGCGGCTGTTTTT 60 47 183 none hypothetical protein Other 5.I Unknown [1066] none YPO1862 ATGGTATTCGTCGTTCTTTGGTT 61 39 TCAACGTAATAGTAACAATATCAGCGC 62 37 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1863 ATGGGATTGTTACTTAAGGTATTGATTG 61 32 TCATTGGCTATGCCACTGG 61 53 342 "ydgC, glpM" putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1864 ATGAGTAATCCAGACTTTACGACTTCTGCTGATCC 70 43 TTATTGGCGGTAGCCGTTCTTAATTTGAGC 70 43 225 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1865 TTGATCAGCGTTCTTCTTGTTGATGACC 69 43 TCAGTCACTATTTGATAACGTCTCCGCATTAAA 69 36 657 uvrY response regulator protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1866 ACTGTTACCAGTCAGCCTGGTGTTTATCGGATGTA 73 46 TTTTTCTGCCAATGCTTGTGAAATACCCG 71 41 255 uvrC excinuclease ABC subunit C Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO1867 ATGCAATTGAATATACCGACTTGG 61 38 TCAAGGTTCGAGCAAATCACTC 62 45 549 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.11 Phospholipids [9] Glycerolipid metabolism none EC:2.7.8.5 YPO1868 ATGGATAAACGAGGAATAACGAGC 62 42 TTAAAATCTAACTTTGGATATGTTTTTTGC 61 23 516 none hypothetical protein Other 5.I Unknown [1066] none YPO1869 ATGTTGTATCGGGAGGCCA 61 53 TTAAAAATTTGCTGTCGAATACCG 61 33 228 none replicative DNA helicase (partial) Starch and sucrose metabolism. Folate biosynthesis none EC:3.6.1.- YPO1870 GTGACCTGTTACAGGAATAATAAAATGAA 61 31 CTATTTATTGCTCATTTGGGATGG 61 38 147 none hypothetical protein Other 5.I Unknown [1066] none YPO1871 GTGCAATACCGTTTGAAAAAATCT 61 33 TTACTTGAATGCATGGGCG 61 47 159 none hypothetical protein Other 5.I Unknown [1066] none YPO1872 ATGAGTTTTAATACCTATTTAAAATTAACAGGAA 61 21 TTAACTGATATCTATTATCGTAGCTTTAGTTAATT 59 23 345 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1873 GTGGCCTGTCGCGAAGTTGAGC 70 64 TTATGCGGCCTGTTTTCCCCG 69 57 255 tnpA putative transposase Other 5.A IS elements; Phage-related functions and prophage [210] none YPO1874 ATGACCGTCACGGCTGTTGCAC 69 59 TCAGTCGTCCTCGTCCGTTTCCC 70 61 420 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1875 ATGAGTGATTATCATCACGGCG 62 45 CTATGCTGACACTGAGGGCA 60 55 141 none putative major tail sheath protein (partial) none YPO1876 TTGAAGGTACTATTTTTTATCGGCC 61 36 CTATCCCGCGTGTGACGTC 63 63 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1877 ATGAAAGATTTCCCCACCAAGTTTACCCAT 69 40 CTACGGACAAGTGTTGCCATTCGTCA 69 50 306 none hypothetical protein Other 5.I Unknown [1066] none YPO1878 ATGGCATTACAAGGAAAGTTTGTT 60 33 TCATTGCGGTATTAATGCGG 62 45 216 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1879 GTGCTGCCGCTGTTTGGTA 63 58 TCAAAAGCCATTGCGGCAG 66 53 288 none hypothetical protein Other 5.I Unknown [1066] none YPO1880 ATGACCAGCGATAAATATAGCGG 61 43 TTAATAAATCCCCAAAAATTTCCAC 60 28 300 none phage-related protein none YPO1881 ATTAGCATTCATACTTTATTTCATTTCCTTTGTGC 67 29 TCATTTAACCCCCTCAGTCCAATCGC 70 50 360 none phage-related protein none YPO1882 ATGAACAAAAGAATCAGTAAAGTCACCATGACAGA 69 34 TCACAGCATCCCATGTGTTTTAGCATAATC 69 40 291 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1883 ATGGCAAGCTGCATCCCCCCA 73 62 TTACACAATCTTGTTTACAGTCTCGATAA 61 31 none hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO1886 ATGAAAAAATCAGTTAAATTATCTGTAGCA 60 23 CTATGGATAGAACTCTCGTAACATCGT 60 41 570 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1887 ATGTCGACAAAATCATTCTATTTTTCTC 61 29 CTAAAATTTATTTAATGTGATTTGTCTGGTC 61 26 435 none hypothetical protein Other 5.I Unknown [1066] none YPO1888 TTGGGAAAATTCCTTAAGTTCCA 61 35 TTAACAAAAACTGGCCACGG 61 45 390 none putative transposase (partial) Other 5.A IS elements; Phage-related functions and prophage [210] none YPO1889 ATGATTATATCCCCTGAGGAGGTC 61 46 TTAAAAGATAGCGGACTGACGG 61 45 132 none putative transposase (partial) Other 5.A IS elements; Phage-related functions and prophage [210] none YPO1890 ATGGGTGGAAAGGGTGTGGACAGA 69 54 TCATGACAGACCGGGGGTGATGT 70 57 786 none GntR-family putative transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1891 ATGGCGATGGCGATGGCAC 70 63 TCAGCGCGACATCACCCCC 70 68 291 none hypothetical protein Other 5.I Unknown [1066] none YPO1892 ATGACAGATCGTGTTATTAAAGTTGGCGTTATTG 69 35 TCAGACCCGGACAATTTCGCC 68 57 255 none putative oxidoreductase Other 5.I Unknown [1066] none YPO1893 AAAAATAGGTATCGCAGGTATTATCGGCACG 69 42 GGGACAACGCTTTATCATTACGGGTGTTGG 73 50 255 none putative exported solute-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1894 ATGAATGCAAAACTCACGCAGCAGG 70 48 TCACTCATCTTTCATCACCTTTTTACTGGCA 69 39 861 none putative binding-protein-dependent transportsystem; inner membrane component Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1895 ATGAGTGATTCTTTGAAGTTTATCTGCCAGAGAAC 69 37 CTACTTAACGCCGCCCATGGTTAAACC 70 52 828 none putative binding-protein-dependent transportsystem; inner membrane component Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1896 GACCATTTATGACAACATGGCGTTTAATCTGA 70 37 TTAAGTGTGCCTCTGCTTGGTCGCA 70 52 642 none putative binding-protein-dependent transportsystem; ATP-binding component Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1897 GTGAAAAACCTTCCCGATGC 62 50 TCATTTTTTATCTTTACAATCTGCTAGCC 62 31 225 none hypothetical protein Other 5.I Unknown [1066] none YPO1898 ATGCAGAGCGTGGAGCTCA 63 58 CTAGTTAATAGAGAGATTCGCAAAAATGC 62 34 186 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1899 GTGTGGATCACTATTGCACCG 61 52 TCACGTTATGGGCATAGAGGTT 61 45 228 none hypothetical protein Other 5.I Unknown [1066] none YPO1902 ATGCTTCCATCCCTGAATCA 60 45 TCATCTGGCACGTTGTATTCTC 60 45 582 none hypothetical protein Other 5.I Unknown [1066] none YPO1903 ATGATGAACATTAATATCCCGGC 61 39 TTACTCCTTAACTGAATAAGTGCTCAGTAA 60 33 165 none hypothetical protein Other 5.I Unknown [1066] none YPO1904 TTGCATCCCTTATTTAGGGCTC 62 45 TTATCGGTCAGATAACTTTTTGTTGA 60 31 282 none putative transcriptional regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO1905 TTGATTCAGCGCATACTGGC 62 50 TTAGCCGGATAAGGATGTCG 60 50 555 none hypothetical protein Other 5.I Unknown [1066] none YPO1905a ATGTCAAAAAAATATCAGCCATTGC 62 32 TCATAGCCTATCAGGGGGGG 63 60 366 none hypothetical protein Other 5.I Unknown [1066] none YPO1906 TGACACGGCTTTATCCTCTGGCCTT 69 52 TATTGATACCGACGGTGCGACCCAT 70 52 255 fyuA psn pesticin/yersiniabactin receptor protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO1907 ATGAATTCTTCCTTTGAATCTCTGATTGAACAGT 68 32 TTATTGGGCAGAATGGCGATAACGG 70 48 255 ybtE irp5 yersiniabactin siderophore biosynthetic protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] Ubiquinone biosynthesis none EC:6.3.2.- YPO1908 ATGTGCATCCCGCTGTGGCC 70 65 TCACCTTTCTGAAGTACTGGGCTGTTTTTG 69 43 789 ybtT irp4 yersiniabactin biosynthetic protein YbtT Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1909 ATGATGCCGTCCGCCTCCC 69 68 TCACAGCGCCTCCTTATCATCATCG 70 52 255 ybtU irp3 yersiniabactin biosynthetic protein YbtU Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1910 GCTTACCTTTAGCTTCAGCGCCGGT 70 56 CGCCAGGTCGTCCATCATGACTTTA 70 52 255 irp1 yersiniabactin biosynthetic protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1911 AACATCACCTTATTCGACCGCCAGC 69 52 GTTCTGCGGAGATCTCTGGCGAGAT 69 56 255 irp2 yersiniabactin biosynthetic protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1912 ATGACAGAGTCACCGCAAACGCAA 70 50 TTACATCACGCGTTTAAAGGTCGAAGGG 70 46 255 ybtA transcriptional regulator YbtA Broad regulatory functions 2 Broad regulatory functions [235] none YPO1913 CATCCAATACTGAATCGCTGTCCCGATTTCC 74 48 CTTCCTGTGTTCCACCCGGCACC 72 65 255 ybtP irp6 lipoprotein inner membrane ABC-transporter Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1914 ATGAAAGACAATAATCCTGCGGATAACCTGG 70 42 TCACTCATGCACCCACTCTCCAGAC 69 56 255 ybtQ irp7 inner membrane ABC-transporter YbtQ Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1915 ATGCGCAATTGCTCTCACATCATGG 71 48 TCAATCAATTGCGCTTGTCATCAGTTCT 69 39 255 ybtX irp8 putative signal transducer Broad regulatory functions 2 Broad regulatory functions [235] none YPO1916 ATGAAAATCAGTGAATTTCTACATCTGGCGTTACC 70 37 CTACACCATTAAATAGGGCGCAATGCTC 68 46 255 ybtS irp9 putative salicylate synthetase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:4.1.3.27 YPO1917 ATGTCCCTTACCGACGCAAAAATCC 68 48 ATGGGATAAACTTATTTTTACCAATTGTATAAGGC 65 29 255 int integrase none YPO1918 ATGAGATTACTGAGCCTGTTTTTACTGTTATTCAC 66 34 TTATAGCGTTACCGTCACTGACTGGCTGTT 69 47 741 none probable pili assembly chaperone Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO1919 GCGAAATACCACTCGTTACCGATTCAACC 71 48 TCATTGTATTTTCACCAGAACGTAAGCTGTGG 70 41 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1920 ATGCCCGTTTACCCGATGGGG 70 62 CTGTACCGCGACACACAAGGCATCGAGTTTATAC 74 50 255 none probable fimbrial usher protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO1921 ATGATCTTGATTGCCCGCCAAATTATC 69 41 TTACAGATAATAATTATTAGGAATGGTGGCACCGT 68 34 645 none probable pili assembly chaperone Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO1922 AAAAACTTTAGTGACGTTGATGCTATTTATCCTGC 68 34 TTAGGGGTAGGTGATCGCATACTGTGCA 70 50 531 none fimbrial protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO1923 CCCAAATATCAAAACCGTGGCGGTA 69 48 TGCCGCAGCTAGCCTATTAACCGAA 70 52 255 none putative sensor protein (pseudogene) Broad regulatory functions 2 Broad regulatory functions [235] none YPO1925 ATGACAAAATCAGTGATGATAGTTGATGACCACC 70 38 TTACACCAAATTATGGGTGTGTGCATAATCAG 69 37 633 none putative two-component response regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO1926 ATGGATATACGTGCATTGTATGACGAGAAACTCA 70 38 TTTTTGGCAGCCTGCGTTAGCTCAT 70 48 255 none putative 4-hydroxybutyrate coenzyme Atransferase 1.H Fatty acid biosynthesis [33] none YPO1927 ATGAGGCTGTTGCACGTCAGGC 69 59 TCAGTATCCTGCCATTTCTTCTGGTGAGTG 70 47 651 none putative transcription regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1928 ATGTCTAATCTTGATACTTACCAAACCCGCAGTTG 70 40 TCAGGCAGAGATACCCGCTCGG 69 64 843 none putative citrate lyase beta chain Central intermediary metabolism 1.C Central intermediary metabolism [63] Citrate cycle (TCA cycle). Reductive carboxylate cycle (CO2 fixation) none EC:4.1.3.6 YPO1929 ATGAAGATGGAGTTACGTCATATACGCTATTTTCT 66 34 TCAAGGAAACACGGTCAGGACAAAGTTTC 70 45 885 none probable LysR-family transcriptional regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO1930 ATGTTTAACCAAAACATTCAATGCA 62 28 TTATTGGCTATCAATATCCGGC 60 41 474 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1931 ATGACCGCAGTAAACCAATTAATCAGCG 69 43 ATTAGGGTGTAGTAAAGACTGGATATATTCTGCTG 65 37 561 none hypothetical protein Other 5.I Unknown [1066] none YPO1932 ATGCGTTGGTTTAGCGATCTCAACCA 70 46 TTATTCTAGCTGTTTATTTTTGGTCTCGGGCAG 70 39 255 none putative sugar transporter Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO1933 ATGAAAAACTCTTCTGCTAACTGCCCAGTCC 70 45 TTAAAAATCATATAGACGAGCAGGGTTATCGACCA 70 37 870 none putative dicarboxylic acid hydrolase Degradation 1.A.1 Carbon compounds [66] none YPO1934 ATGACACTGAAACAGCTTGAGGCCTTTTATTG 70 41 TTAATCACGTTGTGGTAGTGAATGATGTAGTGGT 69 38 255 none putative LysR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1935 ATGACCGAGAGTTATTTGACCATTTTTATTAGAGC 67 34 TTAGAGCCGAATACCTGAAAATGACATAAATCCT 68 35 600 none putative Na(+)-translocating NADH-quinonereductase subunit E Energy Metabolism Respiration 1.B.7.c Electron transport [33] "Ubiquinone biosynthesis. 1,4-Dichlorobenzene degradation" none EC:1.6.5.- YPO1936 ATGAATAAAATTATAACGGATCAGCGTCACCAATT 69 31 TTATGCATGTTCCTGCACTAAACCCGCTAATAT 70 39 255 none putative aminotransferase Other 5.I Unknown [1066] none YPO1937 ATGTCAGGAAAACACTCTGCGGAGACCCAT 74 50 AACCTACTGATTTTTGCTCATATAACTCTTTAGGC 66 34 255 ansP L-asparagine permease Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO1938 GTGATACCGATTGAACGTCATCAAAAA 65 37 CTAACGCGGAGGAGAGGCGATGAT 70 58 771 none probable deoR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1939 ATGCCGACAGATGATAGCAATAACGGAATT 70 40 TCAATTCTTTTCGGTGTAAGGCTCAGAAAC 68 40 255 none putative glutaminase Degradation 1.A.2 Amino acids [23] Glutamate metabolism. D-Glutamine and D-glutamate metabolism. Nitrogen metabolism none EC:3.5.1.2 YPO1940 GTACGGAAGTTAAGGAGTCCTGGGTGCCGAT 74 55 AGCAGGCAGTTCACCCGGCAGATAGTC 73 59 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1941 GGGCTTCAACAGACTACTCACTGTGGGTTAATGAT 72 46 CCTTGTGGGATCAGCGTTTCCACATAAGGATAGAT 74 46 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1942 ATGACCATGAAGAAAACAATTATTGCCAGCA 70 35 TCAATTCAAGCCGACATATTTAAAGTCATAGCTCA 70 34 528 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1943 TTTTTCATATCCGTACTACAAGCCTTTTTACCTGT 68 34 TTATGGGTTCTCCTGTCTATCATCGCTGG 70 48 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1944 GTTATGGCTGATGCTGAAGCAATCGTGGTTTAGA 74 44 TTACCGGCCATATAGCACCTCCACC 69 56 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1945 ATGGCCGGTAATCATCATAAAGGCAATG 70 43 CTACTCTCCTTTAAGAACTTTAGCGGGTTCAA 67 41 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1946 ATGACCTCGTCAATCATAGGGATGAAACCT 69 43 TTACGCCACATGATGGCGGCT 69 57 714 none ABC transporter; ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO1947 ATGGTAAATATCTTGATGAAAAGAGCCGCCAT 70 37 TCATTGTTTCTCTGACACCTTCTGTTTAAATAAAG 66 31 531 none putative thioredoxin Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO1948 ATGAAAATATTGCTGTTAGTGGCG 61 38 TTAGGGAGTTTTAGGTTTCGCG 62 45 312 none putative cytochrome Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO1949 ATGGAAAACACCTCTGCACAGCTAGCAC 70 50 TTTTTGCCAATAAAGTCGCAAAACGTAGTTTTATC 70 31 888 tehB putative tellurite resistance protein Other 5.D Drug/analogue sensitivity [28] none YPO1950 AAAAATTGAGCATTTAGAAGCAGTAAGCCGTAAAG 69 34 TTAGAAATACCGACGTAAGTCACGATCCAGTTTG 70 41 255 none putative peptidase Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO1951 GGCCTTGTGGCAAAGCAGCTTAAAG 69 52 TTCCATTGAACACGTTGGCCATAGC 69 48 255 hmsH haemin storage system; HmsH protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1952 TCAAATCGCTCATTGTTGGGATGATG 69 42 TCGATCATATAAAGGGTACCAGGCAGA 66 44 255 hmsF haemin storage system; HmsF protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1953 ATGTCCGCCCTGTGCTGTCTTCTG 70 58 ATTTCACCCTCCCAATGCCGCGATC 74 56 255 hmsR haemin storage system; HmsR protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1954 ATGAGTACGCCCCTGATTTTTACGGAAC 69 46 TCATCCCTGGCGTAAATGGATCACTG 70 50 468 hmsS haemin storage system; HmsS protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO1955 ATGAATCGGGGAGCGCTTTGG 69 57 TCATGAGTGGCGGCCTCTTAGATCTTGTA 70 48 861 none putative acetyltransferase Other 5.I Unknown [1066] none YPO1956 ATGGTAGAGTCCGTGATTGGG 61 52 TCACATACGGATGAGGTTTTGG 62 45 279 none hypothetical protein Other 5.I Unknown [1066] none YPO1957 ATGGGAAGACAGAAAGCAGTGATCAAAGC 69 45 CTATGAATAAGCATTTAATGTTCGCTGACAGAGT 67 35 789 phoH psiH putative phosphate starvation-inducible protein Other 5.I Unknown [1066] none YPO1958 ATGAAGTCGCAACATGATCCTGGCC 71 52 CTAGAGCATGATGGTCATCATATAAGCGGC 69 47 255 chaA calcium/proton antiporter Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO1959 TGATGATACTGCTGGGCATGCTAGGGCT 73 54 TCAGTACCGCCTCCCTCTTTCTGATTGATACTACA 72 46 255 narX narR nitrate/nitrite sensor protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1960 CAGCAAATCAGAGCACAAATACAA 62 38 CGAAAGCAATGATCAAACTGACTC 62 42 1422 none putative GntR-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1961 TTGAGGCATTCTCTGTACATTTGT 60 38 TTAAATTGCATAATTATGCAAAATATTCG 61 21 198 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1962 ATGGTTAACAGAATAAGCGATTTTTGTTGGGG 70 37 TTACGACGTAACTTTTTGACAAACCTGTTCAATC 69 35 255 astC argM cstC succinylornithine aminotransferase Degradation 1.A.2 Amino acids [23] Lysine biosynthesis. Aminophosphonate metabolism. Caprolactam degradation none EC:2.6.1.- YPO1963 ATGATGAAAGTGCGCCCGGTAGAG 69 54 TCATCGTTTTGTCTCCGGGGCA 70 55 255 astA arginine N-succinyltransferase Degradation 1.A.2 Amino acids [23] Arginine and proline metabolism none EC:2.3.1.109 YPO1964 CACGTCATGTTTAACGCGGTATTGTCTAGCCATC 74 47 TCACACCTTGGGCAAATCAAAAGAGA 68 42 255 astD succinylglutamic semialdehyde dehydrogenase Degradation 1.A.2 Amino acids [23] Phenylalanine metabolism. Tryptophan metabolism none EC:1.2.1.- YPO1965 ATGGCAGGATATGAAGTTAACTTCGATGGATT 69 37 ACGGGTACACCGGCCCCAGATTGA 74 62 255 astB succinylarginine dihydrolase Degradation 1.A.2 Amino acids [23] none YPO1966 TTTTTAGCGATAACCCTATCGGGTAAACCTCC 70 44 TCATGTAATCGGTAATTCACTTTCACACATTTTT 68 29 255 astE succinylglutamate desuccinylase Degradation 1.A.2 Amino acids [23] none YPO1967 GTGAAATATGCTGAAATCGGTGTGACTTACCAT 70 39 TTAAAAACGGTAAGTCAAGTTTACCGCAACAACAT 70 34 153 nmpC phmA porin (pseudogene) Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO1971 ATGAATTTAACTGACTCTTACTACTTTCAGGGCGG 69 40 TCAACGGTAAGTTTGCTCACCCCAC 69 52 807 hutG putative N-formylglutamate amidohydrolase Degradation 1.A.2 Amino acids [23] Histidine metabolism none EC:3.5.3.8 YPO1972 ATGGTATCAGTAACTCACTGTGACAGCTTATGGTT 68 40 GTACTTCTCCTCGGAATACGACAGTGGCAGGTAAT 72 49 255 hutI imidazolonepropionase Degradation 1.A.2 Amino acids [23] Histidine metabolism none EC:3.5.2.7 YPO1973 GTGGCAGAACAATCAACGGTTTTACAATTG 70 40 TCAGGACGTCACCGTACCTTGTGG 69 58 768 hutC putative GntR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO1974 ATGCCAGTTTATTTTACCAAGCGTGCTTTTT 69 35 TCAGACCTCCTGTTGGCAGGCTTT 69 54 255 none putative chlorohydrolase Other 5.I Unknown [1066] none YPO1975 ATGAGTTTTACCGTTTTTGATTTTGCCGG 70 38 CTAGCGGCCAGGCACTAACGTTACC 69 60 573 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1976 GATCTGTGCTCCCCCACTGACAATGGC 74 59 GGCAATCGCGATCAGCGTCTCATGA 74 56 255 none hypothetical protein Other 5.I Unknown [1066] none YPO1977 ATGTCGACATTATTAATTTCAGCACCTCATCTGG 70 38 TCACCGAAGATCAGTGAAGATCTCCTCATC 70 47 510 none 3-oxoacyl-[acyl-carrier-protein] synthase III(pseudogene) 1.H Fatty acid biosynthesis [33] Fatty acid biosynthesis (path 1) none acyl-carrier-protein YPO1979 ATGAAAGTCTTAGTGACAGGGGCAACCAGT 70 47 TTAGCCATGCTGGCCACTCCTCTG 70 58 255 none putative dehydrogenase Other 5.I Unknown [1066] none YPO1980 ATGGCTAAGATCACTACGTTTGAAGTGGGCTAT 70 42 TCATAAATCCCCCTCATGGCATAACCG 71 48 807 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1981 ATGATCCCGTTTATGACGCTCTGGC 69 52 CACCCTGCGACGCCCTGACGAATAATA 74 56 255 none putative coenzyme synthetase Other 5.I Unknown [1066] none YPO1982 ATGACGAATATATTGATAACGGGCGCATC 69 41 TTATTTCTGTTCCTTGTACCAGCGAATAAAGGC 70 39 255 none putative dehydrogenase Other 5.I Unknown [1066] none YPO1983 ATGATTTACCTCGCGGCCATCTGG 70 54 GAATTAAACTTTTTATTACTCAAAACACGATAGCG 65 29 255 none putative glycosyl transferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Sphingoglycolipid metabolism none EC:2.4.1.80 YPO1984 TAAGATAACCTTACAGATAGCTTATATTACCGGCC 65 37 TCATCGCAATCCCTGAGTTGATTCAA 69 42 585 none hypothetical protein Other 5.I Unknown [1066] none YPO1985 ATGAAGACGTTAGATGATTTGATCCCCC 67 43 CTAACGGGCAGTTAACTGCTCAATCTGAGTTT 70 44 255 none putative glycosyl transferase Other 5.I Unknown [1066] none YPO1986 AAAAATATTTTATTCTCATCGCGATGGTTGCA 70 31 TTAAAGGCTGCTGGTAAGGGTACATTCGG 70 48 465 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1987 TCTATTCAGTGGTTGAACGAAAACTGGAAAATGCC 73 40 TTGTTCCTCGGTCGGCTTTATCCCAAGAGA 74 50 255 none hypothetical protein Other 5.I Unknown [1066] none YPO1989 CCCTCCGGCAGTACCTAAACCCATT 69 56 TCTCGGTGCCGTCTCCATTTTGATA 69 48 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1990 ACATGCGTTCCTTCCTTCGTGAAGG 70 52 CTCCTGCCCTGGGATTTCATGTACG 70 56 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1991 ATGAAAATCGCACTGATGATGGAAAACAGT 69 37 TTACGCGAGTATTTGTTTCACGAACGCT 69 43 639 none putative sugar-phosphate isomerase Other 5.I Unknown [1066] none YPO1992 ATGAACAAATCAACCAAAATAGGTTCCCAAA 68 32 TTACTCGCGGCGGCCTGTTG 70 65 660 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO1993 ATGTCCTGTAATTTTAAAATAATACTCACCG 62 29 CTACAGCACTACGTCAATTGAAGACG 63 46 681 none putative dehydrogenase Other 5.I Unknown [1066] none YPO1994 ATGCTCCTAAATAATATTACGCCAGTGAATAAATC 66 31 TTAGCGGGGTTTTGGACTCATGCAT 70 48 255 none hypothetical protein Other 5.I Unknown [1066] none YPO1995 ATGGCTGTCAAAGTGGACGTGAAAGAAA 70 43 TTATTTAGGAGCATTGCTAGTTTCTCCTTGCG 69 41 255 none hypothetical protein Other 5.I Unknown [1066] none YPO1996 TGTCGAAAGTTACTAGTCCTGATTCTATCAATAGA 65 34 TTACACCTCTGACTCTTCTGCTTTATTTATTGCAA 68 34 906 none hypothetical protein Other 5.I Unknown [1066] none YPO1997 TTGAAAGCCTTACTGAAAACATTCACCACTTGT 70 36 ACTGAAGATTTTTATCTTTCAGGAATTTTGATACC 65 29 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1998 ATGAAAGTTTTCCTGATCACACTGGCTGC 70 45 TTATTGTGGGTACTGGCCGTCTGTGACT 70 50 471 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO1999 ATGATGAAAAAGAAAATTCAACAGTATCTGCTTTG 68 29 CTATTTCCCTTCTTTAAATACCTCTTTTGCAATGG 68 34 423 none putative decarboxylase Other 5.I Unknown [1066] Phenylalanine metabolism none EC:4.1.1.44 YPO2000 GTGATCATGATTAAGCGTTCTATCTCT 60 37 CTATATATAAGGGTCAGTTATTGCAAGGG 62 38 1392 none putative two-component system sensor protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2001 ATGCGGCTATTGTTGGTAGAAGATGAGGA 69 45 CTATTTAGTCTGGCGATCGGGGCG 70 58 693 copR transcriptional activator Broad regulatory functions 2 Broad regulatory functions [235] none YPO2002 ATGAAACACAATGCTTTTAAAATGACATCCGTTT 70 29 TTATAAATTTTTCCCGTAGAACTGAGCCAATTTAC 67 31 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2003 ATGAATAAATTACGGTTCACTTCACTGACAAAACA 68 31 TCACGGCATGTTCGGTAATGTGTTTAAC 69 43 666 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2004 ATGAAAGCAAAATATATATTTCAGGTTGTACAGGA 65 29 CTAACACGCCCGCAGTTTGCCTT 70 57 696 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2005 TTTTTCTGTTTACACTGGCTGGAGTGATTTCTG 70 39 TATTTTTCGGTAAATTTAACAGACTGAACAATCA 65 26 843 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2006 GTGTTGGCGGCAACCGCG 71 72 TCATATGCTTACCTCTGGAGTCAGGACAATCT 69 44 657 none hypothetical protein Other 5.I Unknown [1066] none YPO2007 ATGAATATTAATACAGTTCCGCTGGCAACGG 70 42 TTTTTACAGGGAAATTTGTGCTCAATATCCAAC 69 33 831 none putative esterase Other 5.I Unknown [1066] none YPO2008 ATGTCAGCGATTGAACAGTTATCTTATTATCAAAA 66 29 TCAGCAACCGCAGGAAATCGGT 70 55 399 none putative rhodanese-like protein Other 5.I Unknown [1066] none YPO2009 ATGGGGATTAGCCGACAGGCGT 69 59 CTGATGAACTTCATCGGGCGTTTTGTATT 69 41 510 none putative integrase core domain protein Other 5.I Unknown [1066] none YPO2009a ATGACTTACCGCCAGGCGC 66 63 CTGTGAGTCCTTGCGTTTGTG 62 52 312 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2010 ATGGGATTCAAATGCGGTATTGTGGG 70 46 TTAGACGTTAAATAGGAAGTTCATCACATCACCA 68 35 255 ychF conserved hypothetical protein Other 5.I Unknown [1066] none YPO2011 TTGATTCCTTTAGTCATAGCGAAAGACAACGTG 70 39 CTATGCGCTGGCCTTAAAAGCGTG 69 54 621 pth peptidyl-tRNA hydrolase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] none YPO2012 ATGAAACGTAAGAGCGCAACAGTACTGGGTAATAT 70 40 CTATGAGTGACGTTGATTCTTGGTACAACGCT 70 44 273 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2013 ATGAAGCTTTTTGCTGGTAACGCCAC 68 46 TTAATGTTCAAACATTGCAGAGATCGACTCTTC 69 36 255 prsA prs ribose-phosphate pyrophosphokinase Central intermediary metabolism 1.C.3 Sugar nucleotides [11] Pentose phosphate pathway. Purine metabolism none EC:2.7.6.1 YPO2014 ATGACTACCGCGAATCAACCTATATGTCCG 70 47 TTATCTGCGCTCACTGCTTTCAATTTTCC 70 41 900 ipk putative4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] none YPO2015 ATGCCCATGCGTAAAAGACATTTTTATCG 69 38 TTATTTGATCGTCCAGCTATCCATTTTCAGTTTAA 69 31 624 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2016 GCTTCAGACGAGAATCCATACTAACACCAGTATTA 68 40 CTAATGCTGATCCAGCCCAAGGCTG 70 56 255 hemA glutamyl-tRNA reductase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] Porphyrin and chlorophyll metabolism none EC:1.2.1.- YPO2017 ATGAAGTCTTCTATTGTTGCCAAACTGGAAGC 70 41 TTAGTCTTGCTCTGACAATGCAGACAGTTGG 70 45 255 prfA sueB uar peptide chain release factor 1 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO2018 ATGAATTATCAGCATTGGCTGTCGTTGG 70 43 TTACACGGCCCATTGCCCCA 70 60 831 none putative protoporphyrinogen oxidase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] none YPO2019 ATGTGGGTTGATTACATCGCCATGAAATATTT 70 34 TCATAGATATCCCATCAGCAGTGGTAATTTAGTTG 68 37 402 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2020 ATGAGTAGCATTGCTGATTTCGAATTTAATAACGC 70 34 TCAGTGCAATGTCACTCGCTGTTGC 70 52 810 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2021 ATGAAACAGAAAGTGGTTAGCATTGGCGATA 70 39 TTACTTACTGGTATCCAGCGCAGGGAAACT 69 47 855 kdsA 2-dehydro-3-deoxyphosphooctonate aldolase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Lipopolysaccharide biosynthesis none EC:4.1.2.16 YPO2027 ATGGTGATCGCGATAACGGTTGG 68 52 CTAGTTATTCTGTAGTGCCGCCAGTGCTTC 69 50 423 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO2027a ATGGGTTCCCGGCTAATGT 61 53 CTATTTTTTCGGACTAAATGCGAG 60 38 297 none hypothetical protein Other 5.I Unknown [1066] none YPO2028 ATTTCTCTATTATTCACTGTTTACTTCACCTCAGC 65 34 TTAACGCCAATTTTTGGCGGTGG 70 48 876 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2029 AAAAACACTGATAACGCTAATGAGCGGGC 70 45 TTATCGTGTCATTACCTGACGAGCAAACTCTTT 70 39 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2030 ATGAGCCGCACCACCAATGG 68 60 TCAGGCTTTCCCGGTGGACTGT 69 59 837 none putative binding-protein-dependent transportsystem membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2031 ATGAAAAGCTGGCGCAACGACCT 69 52 TCATTTGACGTCTCCTTTACGGGTGG 69 50 867 none putative binding-protein-dependent transportsystem membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2034 AAAAAGCATATGTCGAAACTGGTACTGGAGC 69 42 CTATGCCGGAGGATATTTATTCTGCTTCAGC 70 45 342 none putative ABC transporter ATP-binding protein(pseudogene) Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2035 ATGGCGTTTAATTTTCACCAAGCGGA 70 42 TTAATCCCAGCGCAGACCCGC 70 62 831 none hypothetical protein Other 5.I Unknown [1066] none YPO2036 ATGAATATCCGACCTGAACGGCTTGAA 69 44 TTAATCCTCATTAATCACCTGATACAGAGGGATCA 69 37 255 none putative transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2037 ATGTATCCTGTTGATTTACATATGCATACCGTTGC 70 37 TTACAGCTCTGCTAGCTCGGGGATCG 71 58 738 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2038 ATGAATGATTTTTCGCTGATGTGTCGG 69 41 TCAAGGACGAAGGGGATTTTCTTCAGATAATT 70 37 561 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2039 AAAAATTAATGTGGGGCGCTGCTGC 71 48 TTAGTCAGTCAATGGGATGACTAATTGGCC 69 43 564 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2040 ATGGCTTTGGTATCGCAAGCTCGA 69 50 TTAGCTGCTGCTCAACATGGCAGATTC 70 48 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2041 ATGTTCGGTTATCATACAGCAACACCCAAA 70 40 TCAAACATTAACCCTTGGCCTTGCC 69 48 369 rimJ ribosomal-protein-alanine acetyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] none YPO2042 CTTAAATGCACATGAAGCCCGTGTTATCGGCT 74 47 AAAATACGCTCAATCATACGTTGTGCAACAATCGC 74 40 255 none putative oxidoreductase Other 5.I Unknown [1066] none YPO2043 ATGAATCTATTGAAATCACTGGCCGCC 69 44 TCAGTAAAGCCGGGGGCGG 69 68 357 mviN putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2044 ATGATTATTTTGTTGCTTAGTAATGCTGTTTTAGC 65 29 CCTGTACAGGTTCGTTCTGTTTATTACTATCGGAA 69 40 255 none putative hemolysin activator protein Cell processes 4.I Pathogenicity [38] none YPO2045 GTCACCTCTGGCACGTTGCGATTAA 70 52 ACCAACGCTAACGCGTCATTGTCTG 70 52 255 none putative hemolysin Cell processes 4.I Pathogenicity [38] none YPO2046 CTCTTCTCTCAGATAAAGTCAGCCAGGCGCTGATT 74 49 TCCAGACCTTGTTTCAGCGTTTTAGCGGTTAACAT 74 43 255 argS arginyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Arginine and proline metabolism. Aminoacyl-tRNA biosynthesis none EC:6.1.1.19 YPO2047 ATGCACGGCCTGGAAGAGATCATT 69 50 TTAGCGACCGTGCTCGCTATCAACA 70 52 576 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2048 ATGACTAAATTGGAAGTTTGTTGCTATAGCGTTGA 69 34 CTAGGTGTGCTTGGCAAGAGGCGA 70 58 765 cutC putative copper homeostasis protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2049 ATGATTGAATTTGGCGATTTTTATCGGCT 69 34 TTATGGCTTACGGGCGATTAACACCG 70 50 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2050 ATGCCAAACCGCGATACTCAATCTCA 70 46 TCATTGAGCCTCTCCTGCTTTCAGG 68 52 804 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2051 ATGGTTAGCTCTCTTTATGTGGTGTTGGGC 70 47 TCAGGTAAAACTGAAAATCTGATCCCACGG 70 43 396 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2052 ATGTATATCGGACTGCCGCAATGGC 70 52 CTAAAAGAGTGTCTCTTGCTCTGGCCAATC 68 47 816 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2053 CGTTACACTTTGTGGTTGGGTTAACCGTCGTC 74 50 CCTTTCTTCGCCACCACGCTAATGGAC 73 56 255 aspS tls aspartyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Alanine and aspartate metabolism. Aminoacyl-tRNA biosynthesis none EC:6.1.1.12 YPO2054 ATGAATTATAAACGCCCCGAGTCGGTTC 70 46 CTAGACGGAATAAAGAACATACTCTTCAATCGCTT 68 37 444 nudB ntpA putative dATP pyrophosphohydrolase Purines; Pyrimidines; nucleosides; nucleotides 1.F.5 Miscellaneous nucleoside/nucleotide reactions [9] Starch and sucrose metabolism. Folate biosynthesis none EC:3.6.1.- YPO2055 ATGGCAGGTCATAGTAAATGGGCCAAC 69 48 TTACAGGGTTGCTGCTACTTCATCAGAGATTTC 70 42 744 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2056 ATGGCGATCGTATTAGGTATCGACCCC 69 52 TCAGCGTATCCGGCCACGTG 69 65 522 ruvC crossover junction endodeoxyribonuclease Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2057 ATGAATGCCGCTAACCACGCAGTAG 69 52 TTATAACGCCGCACGGAGAGCATC 69 54 681 ruvA Holliday junction DNA helicase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2058 ATGATTGAAGCAGACCGTCTAATATCGGC 69 45 TTATTCTTCCCGAGTAATACCAAAATGTTTATACG 66 31 255 ruvB Holliday junction DNA helicase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2059 ATGATTGAATTACTGTTACCCGGTTGGTTGG 70 42 CTATCCTCGTGCTTTTTGCGACAGG 68 52 786 znuB high-affinity zinc uptake system membraneprotein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2060 ATGATGCCCATATTGGTAACGCTTAATAAGATATC 68 34 TCATGCGCCACGGCTCCC 71 72 762 znuC high-affinity zinc uptake system ATP-bindingprotein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2061 ATGTTACATAAAAATAAATGGCTAAAACAGGCAA 66 26 TTACTTCAGGCAGCTCACATATTGGTTCG 69 45 255 znuA exported high-affinity zinc uptake systemprotein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2062 GTGCAGCAGATAGTCAGAACTATCACTTTAGCA 68 42 CGGAATAACTTGCTTAACAATGGCCAAATACTCA 71 38 255 none putative M23/M37 peptidase-family protein Other 5.I Unknown [1066] none YPO2063 AAAAATGACGCAACTGGTTTTATTCCGGT 69 38 CTAAAGATCTTTGCGCACATAGGGCTCG 70 50 255 msbB lipid A biosynthesis acyltransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO2064 AGGACCAAGATTGTTACTACACTGGGGCCGG 74 55 GACTGGTATTGGTCGTACCAATGGTGCCCAT 74 52 255 pykA pyruvate kinase II Energy Metabolism 1.B.1 Glycolysis [12] Glycolysis / Gluconeogenesis. Purine metabolism. Pyruvate metabolism.Carbon fixation none EC:2.7.1.40 YPO2065 ATGAATACGCTGGAAAATATCCAAAATAGTATGGA 68 31 TTAATCACCGTTGTTTACTGGCAAAGAATCCTTAT 69 34 870 hexR hex regulon repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO2066 CAGGTAGCCCAGGCGTGTGACCTG 72 67 ATTCCATGACCGGCCATCACGGG 74 61 255 zwf glucose-6-phosphate 1-dehydrogenase Energy Metabolism Pentose phosphate pathway 1.B.5 Pentose phosphate pathway [3] Pentose phosphate pathway. Glutathione metabolism none EC:1.1.1.49 YPO2067 ATGAAAAGCTGGAAAACGAGCGCAG 70 48 TTATGCTGCCGCACCTTCAACC 68 55 642 eda hga kdgA KHG/KDPG aldolase Energy Metabolism 1.B.6 Entner-Doudoroff pathway [2] Pentose and glucuronate interconversions. Arginine and proline metabolism. Glyoxylate and dicarboxylate metabolism none EC:4.1.2.14 4.1.3.16 YPO2068 GTGATTTATTGGATATTTTTAGGTCTGGCAATT 66 30 TCAAGCTGCTGCATGATGCTCACC 70 54 444 none putative integral membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2069 ATGCAGCAGCTTGAGTTTTACCCTATAGCTTTCT 70 41 CTATGACAACTTAATCATCACCATGCCCG 69 45 330 none putative integral membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2070 ATGAGTATTGAGAGAATTAATCCGGAGAAACGTTG 70 37 TCATATTGCAGCAATGATTTTGATTTCGACTTTAT 70 29 345 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2071 AGACGGCGCATTAGCGCAGGCTATTAAAG 73 52 GTAAGCTATTTAAGAACATCGCGCCATAAGGACGC 73 46 255 none putative DEAD box family helicase Other 5.I Unknown [1066] none YPO2072 ATGTCTACGCGAATTTTAGCGATCGATACTG 69 42 TTTTTCCAGGTAACTTCATTACGCAGGTAGACC 70 42 699 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2073 ATGGCGATGAATACGTCAATGACTCAGTCT 70 43 CTAGTCAGTGACAATAGTTTGTATCTCTGCTGGGC 70 46 606 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2074 GAAAAAGTATGGCTAAAGCGCTATCCGGCAGATG 74 47 TAGTTCCCTGCGCAATATTTTACCCACATTCGACT 74 43 255 fadD long-chain-fatty-acid-CoA ligase Degradation 1.A Degradation [18] Fatty acid metabolism none EC:6.2.1.3 YPO2075 TTGAAAGATAACGGATATAACGACCAAGAGAATGA 69 34 TTAATAGTGTTGTAAGATTTCAAGCAATTCAGAAG 65 29 255 rnd ribonuclease D Macromolecule metabolism Degradation of macromolecules 3.B.1 RNA [13] none YPO2076 ATGGCTTTGTTAGACTTCTTTCTGTCCCGC 71 47 TCATTTAGGCGTTTCTTCCGTTTCCG 70 46 270 minE cell division topological specificity factor Cell processes 4.C Cell division [24] none YPO2077 ATGGCACGCATTATTGTTGTTACATCGG 70 43 TTATCCCCCAAAAAGGCGTTTCAGG 70 48 813 minD septum site-determining protein Cell processes 4.C Cell division [24] none YPO2078 ATGTCACAATCGCCAATCGAGTTAAAAGG 69 41 ATAGTTAATGTATTATCCTGCAGATACAGACGTGC 66 37 687 minC cell division inhibitor Cell processes 4.C Cell division [24] none YPO2079 TTGATAAATTCAATGTTTGATAAGTTCG 61 25 TCATCGGTGATCCAAACTACG 61 48 264 none hypothetical protein Other 5.I Unknown [1066] none YPO2080 ATGCTTTGTGCGATTTACAGAAGCCCTAAA 70 40 TTATGCTTTGGTTTCACCCAAGTGCATTT 70 38 273 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2081 ATGAAAGGGTCAGTTACGGCAGTCATATTG 69 43 GACCGATACTATCGGCCATCATACCAATG 70 48 255 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2082 ATGTATCAACATAGAGACTGGCAAGGGGCT 69 47 TTATATTATGCGGGTATTCACTGTTTTGCCATTG 70 35 657 none putative fumarylacetoacetate hydrolase familyprotein Other 5.I Unknown [1066] none YPO2083 ATGTCACAACCTCCTTTTTGGCAACAAA 69 39 TTATTTAGCCCAACTCGGCTTATTCAATATGTGG 70 38 447 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2084 TTGAGGGAGTCTGTTCGCTACACCATC 69 52 TCACTGTGATATGGCGCGGGG 70 62 255 int putative phage integrase (pseudogene) none YPO2087 ATGGATAACGTTATTCAAATGAACCC 62 35 TTAAGCAGAAATCCTCTCGCC 61 48 261 none putative phage excisionase none YPO2087a TTGACTGGATCCTGCTTGGA 62 50 GAATGGCTTAACTTGAGATGCG 61 45 201 none putative phage protein none YPO2088 GTGGTTAATCTCTTTTTCGTTCTGC 62 40 TCATGCTGCTTTACTCCCAGA 61 48 645 none putative methyltransferase Other 5.I Unknown [1066] none YPO2089 ATGGATAAAAAGGTCTTCGTGTTATGCGGT 69 40 TCATGCTGCCACCTTTCCCTTGTC 70 54 447 ninB putative phage protein none YPO2090 AAAAATCGTAACTGCAAAGTATGCAAAACGAGG 70 36 TTTTTAAGTGCTTTGGTTTTTGCCCGG 70 41 606 none putative phage protein none YPO2091 ATGCGTGACATTCAACTTGTTCTTGAACG 70 41 TCAATAACCCCTTCGGCGTTCTGTAGC 71 52 321 none putative phage antitermination protein none YPO2092 TTGACGGTATTCGGGGCTA 61 53 TCATTGGGTGGTGAGACGTAC 61 52 219 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2093 ATGAATACTCAATTATCCTTTCGCAACACTCAATT 68 31 TCAATAAATTCGCTTGAACTTGCTGCTATCC 69 39 564 none putative phage protein none YPO2094 GTGAAAATGATAACGGATAAGGATGT 61 35 TTAAAAAAGGCCTCGTATATCGC 61 39 183 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2095 ATGAAATTTGCAGAATTACCACATG 61 32 CTAATAATCTTGACCCAGCTTAAGTTTATC 60 33 210 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2096 ATGTCAGATTTTACTATTAGAGTTGAGCTACA 61 31 TTAGGCTTTACTGAGGCTCCACG 64 52 276 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2097 GTGGCCTTTTCCGTTTTAGC 61 50 TTACGAAGAGCTGGACTCATTAGC 61 46 321 none putative phage protein none YPO2098 ATGGCGACAATAAAACGCATTGCCT 69 44 TTAACTTTCCAGGCATAGCGCCTTCTC 68 48 513 none putative phage lysozyme none YPO2099 ATGCCTGGAAAGTTAACTACTGCCCTCATTG 70 45 TTACTTCAGGCACACGTTAGTGATGTAGTCCTG 70 45 459 rzpR putative prophage endopeptidase Lysine degradation. Biotin metabolism none EC:3.4.-.- YPO2100 ATGACTAGCTTGGACTTTCTGAGGAATATAATTAA 65 31 TCATGCTGCCTGATTATTCAACTGCC 69 46 678 none phage regulatory protein none YPO2101 ATGGCTAATTCAGATACACAAATGAAGCGG 69 40 TTAAGCCAGTTTTAATAGGCATGTTCCACACG 70 41 636 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2102 ATGGCTGCCTTAAAACCGGATGTGA 70 48 TTACAGGTCATCATCTCCTATTTCATCCATTACTG 68 37 450 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2103 GTGGCAGTTACACAGAATTATGGACAGGCT 69 47 TTAATATGCAGTTCTCATGTTGATACTGAATGCTT 67 31 255 none putative phage terminase (pseudogene) none YPO2106 ATGGCTAATAACGACATTACATTTATCCGGCC 70 41 TTACGGGTCATTGTTTTGCGCG 68 50 729 none putative phage protein (pseudogene) none YPO2108 ATGGCAACGATTAACGAAAGGCTGC 69 48 CTACAGGCCTGCATCAGAGAATGCC 69 56 255 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2109 ATGCTATTCCGAAATATCGCACGTAAATATTATGC 69 34 TTATTCTTTCGGAAGTTTTAAAAATGCCTGCG 70 34 774 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2110 ATGACCACAACCGTTAACTCTGACCTGATC 69 47 TTACGCAGCAGTGACAGTCACTACACAAGTT 69 45 255 none putative phage protein none YPO2111 ATGGTGATGACTATGGGGGC 62 55 TCATTCACGCCTCGCTATTG 62 50 531 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2112 ATGACTGCAAAACTTAATATTATTCAGTTTG 61 26 TCACCGCCTTTCTATCTGAGAG 61 50 255 none conserved hypothetical phage protein Other 5.I Unknown [1066] none YPO2113 ATGGCCATCAATTATCCACGAATGC 68 44 TCACGCCCTCAGTTGTGGTTTGTAGC 70 54 351 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2114 ATGGCTGACAATTCCAGTTTCATGGC 69 46 TCACTTATTCACCTCATTAGCTGCTTCAGTAAAGT 68 37 585 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2115 GTGAGTACTCAGCGAATCACTGC 61 52 TTAGATAACGTCAGCGCGATAAC 61 43 408 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2116 ATGGGCTTTGCACTTCCAAACGG 70 52 TTATGCGGTTACTGTGACGGCGC 70 57 255 none putative phage protein none YPO2117 ATGGCAGTAAAATTTACGCTGGTACCGTC 68 45 TTTTTCGCGATTACCGAGTAATTCACGG 70 43 312 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2118 GTGATTATCGAGATATGGCCGG 63 50 TTACTTGCTCCGCTTGTGAATAA 61 39 222 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2119 CTGCTGTATTGAGCCAACTGGCTGG 69 56 CATAGCGCGATCGAGTTGTTGGGTA 69 52 255 none putative phage tail protein none YPO2120 ATGGCAATTGAAACATTTCTTTGGCGA 70 37 TTACGGAGCAAAAGCCTGCTCGAA 69 50 342 none putative phage protein none YPO2122 ATGACAATTAATACTGACTTGCAACGACTGGAG 69 39 CTACCTCTTGATCAGGGCCGCG 69 64 753 none putative phage protein none YPO2123 ATGAGAGATAAAACGCTTAAAGCGATATTGGCC 70 39 TTATAATTGTGAAATTTCATACCTCACCACCTTCA 68 31 711 none putative phage minor tail protein none YPO2124 ATGAACAAATATATAGCGAACGAGAAA 61 30 TTAGTGCAATTGTTCTGTACTGATCA 60 35 633 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2125 ATGCCTCACGGTGAGGTAAA 61 50 CTACTCAGGGATCTCAATCATGAAC 60 44 540 none putative phage regulatory protein none YPO2126 ATGAATAGTTTAGCAAAGTCAAATGCAAATAACAC 66 29 TTTTTACCACGGAAAATAACCTTTTTATTTTTGGC 69 29 255 none putative phage protein none YPO2127 ATGGAGGGTGAACGATTGG 61 53 TCACTTATCCATCCAGTATTTGTATCTAGC 62 37 552 none putative phage-related membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2128 ATGAAACAGATAATCATAAGTTTGGTAGTTT 60 26 TTAGATGCATTTTTTAATGCCATCA 62 28 351 none putative phage-related lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2129 ATGACTTTATTTGCGCAAGAAGTAATGACACCA 70 36 TTACATTTGATCTTCAGCATAAATACCCGCC 69 39 621 none putative phage tail assembly protein none YPO2130 TTGTGTAAGGTCAGCCCACC 61 55 CTATTTGTTGTTTGCAGAAAGCC 60 39 312 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2131 TGGCACGTAAACCAATTAAAGGCCG 70 48 ATCCAGTTTCCGTTATCACGTCGCC 69 52 255 none putative phage host specificity protein none YPO2132 ATGGCTGAACCTATTCTATATATCTCCC 61 39 TTAAAAATAAATGTCCGCGTTAAGTAC 60 30 999 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2133 ATGGCTTGGTACCGGTCAG 61 58 TCAAATAACCCAAGATGATTTTATTCC 62 30 918 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2134 ATGAAAAAGTTAAATAAACTGGATAGCG 60 29 TCACTCAGGCTTTAGTGGCC 60 55 420 none putative phage tail fiber assembly protein none YPO2135 GTGATTTGGAATATTTGGCAGG 61 41 TCACTCCCCCTTCAACCTG 61 58 156 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2137 ATGCGAAAAACTTCATCACTGTTTCTCCTGT 69 39 CTATGATGATAGCGGGCGGTGAGTG 69 56 255 none conserved hypothetical phage protein Other 5.I Unknown [1066] none YPO2138 ATGTACAGTCAGAACCCACCGATATATCTCGATAA 69 40 TCAGACTCCTGTCTCGTTTGTGGTTGTAGC 70 50 255 none putative aminotransferase Other 5.I Unknown [1066] none YPO2139 ATGGACCAACAAAACACTCACATTGGC 69 44 TCATGAGCGAGACGACAACGGC 70 59 741 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2140 ATGAAATATTCAACGTTAGCCGC 61 39 CTAGGCCTGGGTGTGCGTA 62 63 357 none hypothetical phage protein Other 5.I Unknown [1066] none YPO2141 ATGGAAAATAAAGATATGTTGCAATTCCTTAACCG 69 31 TTATCGGCCGAACAGATCGCGT 69 55 546 dsbB roxB disulfide bond formation protein B Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO2142 ATGGACATTACCAACAGACAAGCTGTACTCAAGA 70 41 GATGTGTGGCAAACTGATCCATCCAGCCT 74 52 255 nhaB Na+/H+ antiporter Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2144 ATGGTTATAAAGGCGCAAAGTCCTGCC 70 48 CTAACGACGCGCTTCGGCCA 70 65 720 fadR oleR thdB fatty acid metabolism regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2145 ACAGACCACGCAAGATAAGCGCCTGACT 72 54 GTCGAGCAAATCGATACTGCCATCATCATTCA 74 44 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2147 ATGCGCGTTGTCATTTTAGGAAGTGGT 69 44 TTAACGGATGGGGTGAATATCGTGTAACG 70 45 255 dadA dadR D-amino acid dehydrogenase small subunit Degradation 1.A.2 Amino acids [23] Phenylalanine metabolism. Nitrogen metabolism none EC:1.4.99.1 YPO2148 ATGCAAAAATTCCTTTTCCTGCTATTAAGCTTGAT 70 31 TTATTTGCCGTTGTTAGTGTATTTCTTCCAACTTG 69 34 255 none putative multidrug resistance protein Other 5.D Drug/analogue sensitivity [28] none YPO2149 AAAAAGTTCAAGGTATTTACCGTGCACCTCG 70 42 TTATGCAACATCCATATTCCCAAAGCG 68 41 870 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2150 ATGCACGATCTCAATGATCTCTATTACTACGCAG 69 41 TCATCCAATTGGCTGAAGCGCTG 70 52 906 none LysR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2151 ATGAAATGGTATGATGGACTACGGCATCC 69 45 AGTGCTTATGTTGATGATACTTATGTTGATTATGC 65 31 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2152 GGCTATTTCATTGACAGACGACTTAACGGCAAGAA 74 43 CTAATTATCTACGGTCTGTTTGTGGAACAACTCAC 68 40 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2153 AGGAATTCCTCGCTATCTGTCAGCAAGATCGTAGT 72 46 TTTCTCCATCATCCTATCGACAAAATCATCATGCT 73 37 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2155 AAAAAGATCGTAAAGAAATGAACCAAATAAAAACG 67 26 TTAGCGGAATGTATAGGTAACGCCTGTCCA 70 47 771 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2156 ATGAACGAGAAAGTATTTACTCTCCCTGTTGTTGA 69 37 TTAGGTGTTTTTACGACTACGGATGGTCATCG 70 44 876 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2157 ATGACTATCAAAGTAGGTATCAACGGTTTTGGCC 70 41 TTACTTGGAGATGTGAGAGATCAGATCCAGAACTT 69 40 255 gapA glyceraldehyde 3-phosphate dehydrogenase A Energy Metabolism 1.B.1 Glycolysis [12] Glycolysis / Gluconeogenesis. D-Arginine and D-ornithine metabolism none EC:1.2.1.12 YPO2158 ATGGCCAAAGAACTGAACCCTACAGAAAATATTG 70 38 TCAGCCTGCAGTTTGCTCACCATTT 69 48 414 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2159 ATGGTGAGCAAACTGCAGGCTGAAG 69 52 TTATTCTGGTTTCAACTTAACCAACGTTGACTGAC 70 37 366 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2160 ATGAAAGCAGCCTTGCTCTTAATCGATTTACA 70 37 TCAGTCGGCTGAAACGACTTCAGC 69 54 648 pncA nam putative pyrazinamidase/nicotinamidase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.7 Pyridine nucleotide [6] Arginine and proline metabolism. Lipopolysaccharide biosynthesis. Nicotinate and nicotinamide metabolism. Pantothenate and CoA biosynthesis none EC:3.5.1.- 3.5.1.19 YPO2161 ATGCAGAAGAAATCTATTTACGTCGCTTACACG 69 39 TTATTGAGTATCGGTTAATTCACCACGTAAATTTT 67 29 255 ansA L-asparaginase I Degradation 1.A.2 Amino acids [23] Alanine and aspartate metabolism. Cyanoamino acid metabolism. Nitrogen metabolism none EC:3.5.1.1 YPO2162 CGCACTTTGTGGCGAATTATTGCTGGTTTT 73 43 CATAACGATTCTGCGGATCATTCAGGGTATTGAAT 73 40 255 sppA protease IV Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO2163 ATGGATGCGTTGGAACTCTTACTTAACCG 69 45 TTAGAAATAGCGGACAAAAGCGCTGTGG 70 46 552 none putative nitroreductase Other 5.I Unknown [1066] none YPO2164 ATGGCATCGCCAGCGATACGTC 70 59 TCACACTACAATCTCAATCAGCGCCC 69 50 255 selD fdhB selenide; water dikinase Central intermediary metabolism 1.C Central intermediary metabolism [63] Selenoamino acid metabolism none EC:2.7.9.3 YPO2165 GTGATGGATTCATCGCCTGTGGTAATGATCAAAT 74 41 GGGTGCCCCTGAAGGGCCG 73 79 255 topB DNA topoisomerase III Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2166 ATGAAAACACGGTTGCTATTGAG 60 39 CTATCTGGTTAGTCTTTTCCAAATCAGT 61 36 291 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2167 ATGATTGATGTCGTCGCCGCC 69 57 TTATTGTCTCTGTGCGATAAACGCGTCTAGC 70 45 387 nudG putative pyrophosphohydrolase Purines; Pyrimidines; nucleosides; nucleotides 1.F.5 Miscellaneous nucleoside/nucleotide reactions [9] Starch and sucrose metabolism. Folate biosynthesis none EC:3.6.1.- YPO2168 ATGAAGTTCGTTTCTTTTAATATCAATGGCCTACG 69 34 TTAAAGTGAGAATTCGGACCAAACCGG 69 44 807 xthA xth exodeoxyribonuclease III Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO2169 ATGTTTCTATCTCGAAAGTTAGAAGCC 61 37 TTACTCCAATGTATGTATATAATCAATAAGACG 60 27 861 none putative LysR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2171 ATGCCACACCAGAATGTACAAAAG 62 42 TTATCGAGTTCGGTGACCGCC 67 57 "purU, tgs" formyltetrahydrofolate deformylase (pseudogene) Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Glyoxylate and dicarboxylate metabolism. One carbon pool by folate purUtgs EC:3.5.1.10 YPO2172 TTGTCAGAACTGTGTCCTTGTGGCAG 68 50 TTAACGGCCACAGCATTTCTTGTGTTTTT 70 38 465 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2173 ATGGAAAAACCACTAGCAGGTAAAAATATTTTAGT 65 29 CTATTCTTCAGCAGCAAGCATCAGCCTTAAA 70 42 255 none probable response regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO2174 ATGAAGGTTACGGTTTTTGGTATTGGTTATGTGG 70 38 TTAATCGAAACACCACGCCCAATTCCATAATAAGT 72 37 255 none putative nucleotide sugar dehydrogenase Central intermediary metabolism 1.C.3 Sugar nucleotides [11] Pentose and glucuronate interconversions. Starch and sucrose metabolism. Nucleotide sugars metabolism none EC:1.1.1.22 YPO2175 ATGAGCGAAGCGTTAAAAATTCTTAACAACATCC 70 35 TTACAACAGGAAGTCATCCAGTGATTTGCC 70 43 399 hns hnsA drdX osmZ bglY msyA cur pilG topS DNA-binding protein Hns Broad regulatory functions 2 Broad regulatory functions [235] none YPO2176 ATGGCTCAACTTTACTTTTATTACTCTGCAATGAA 67 31 CTACGAACAGCAGGCGGCTTTAATTG 69 50 591 tdk thymidine kinase Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Pyrimidine metabolism none EC:2.7.1.21 YPO2180 TACGCCAGTCGTCGTTGACGAAACT 69 52 GCAGTAGCTGCCGCGACTTCTTCTT 69 56 255 adhE ana aldehyde-alcohol dehydrogenase Energy Metabolism 1.B.8 Fermentation [3] Glycolysis / Gluconeogenesis. Fatty acid metabolism. Bile acid biosynthesis. Tyrosine metabolism. Glycerolipid metabolism. Pyruvate metabolism none EC:1.1.1.1 1.2.1.10 YPO2181 ATGACAAGCTATCAGGCTGCTGCTGG 70 54 TTAAAGTAATCCGGGGAAAATAGCTTTGATACCG 70 38 546 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2182 GCTGTAGCCGTTGCAATGAGCATGATGG 74 54 TACCCGTGTAGCCGCCAACATAAGGTTTCACTAAA 74 46 255 oppA periplasmic oligopeptide-binding proteinprecursor Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2183 ATGTTAAAGTTTATTCTACGTCGTTGTCTGGAAGC 68 37 CTAGTAACGGATTTTTGGATCGATAACGGCATA 70 39 255 oppB oligopeptide transport system permease protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2184 ATGTTGAGCAAGAAAAATAGCGAAGCTCTGG 70 42 TCAGCGATCTTTCGGATCAAGGGC 71 54 906 oppC oligopeptide transport system permease protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2185 ATGACGACTATCAATAATCACTCTACTGTTCAGTC 65 37 TCATACTAATTCCCCTACCGGCTTATAACAGGC 70 45 255 oppD oligopeptide transport ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2186 ATGAATGCCATGACAGAGAAGAAAGTATTATTAGA 66 31 TTACAGTGGGTCAACTTTAAGGCACGAAAC 69 43 255 oppF oligopeptide transport ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2187 ATGGACCAGAACACACAAGAGCCAAGC 71 52 TTATTCTTTCCATAATATGTGGCAAAGCTTGTGA 69 32 354 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2188 AGTTGGCTTTCCGTTTTTGGCTACTGGTTACTCAT 73 43 AATAGAATAAACGCTCAGTTACTCGGTGCCAAAGA 71 40 255 cls nov cardiolipin synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.11 Phospholipids [9] Aminophosphonate metabolism. Glycerolipid metabolism. Sphingophospholipid biosynthesis none EC:2.7.8.- YPO2189 ATGATCTATTTCAGACTGCTGACAAA 61 35 TTAATCGGTTATATTGATGTATAAAATCTTTTC 61 21 249 none hypothetical protein Other 5.I Unknown [1066] none YPO2190 ATGAAATGGATTACGACATTAGCG 61 38 TTAGAAGCGGTAACCAACCCC 62 52 540 ail attachment invasion locus protein precursor Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO2191 ATGTCTCAGTATAAATTAGCTAAAACAGTATTCTT 60 26 CTACCCTTTGTAGTGTTTCAGCCA 62 46 264 none hypothetical protein Other 5.I Unknown [1066] none YPO2192 ATGTTTTACGTCATATTTGCTACAGATGTACCTAA 65 31 TCAAAACACCCGTTTAAAGGGTTTAATAATTACCG 70 34 297 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2193 ATGCAGCTAATAAAATTTTTCTCAGATCGACGG 70 36 TTAATTCATTTCCATTTTGCCATCGAGCTT 69 33 759 tonB TonB protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2195 ATGACTCAGGAACAACAACTATCTGGCGG 70 48 TTATTGAGTCGCACCTACTTCGAAATTACCTTTAC 68 37 450 none putative acyl-CoA thioester hydrolase Degradation 1.A Degradation [18] Benzoate degradation none EC:3.1.2.- YPO2196 ATGAAGCAACTTTTAGATTTTCTCCCATTAGTCGT 69 34 TTAAGACTTCTTCTGCTCTTCCGGCATATGG 70 45 543 ispZ ispA putative intracellular septation protein Cell processes 4.C Cell division [24] none YPO2197 ATGGCCTATGAGCGTGATTGGATAAAGC 70 46 TTAAATCAACACGACACCTAATGCCGC 69 44 255 none putative sulfate transporter (pseudogene) Cell processes Transport/binding proteins 4.A.5 Anions [14] none YPO2199 ATGCCTATCACGGCTAACACTTTATACCGTG 69 45 TTACTGTTTATCCAGTGAAACTGGGCGTAACA 69 41 771 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2200 ATGCACATGTTGATTTTACTGTTTATTT 60 25 TTATGTATGGTTATTTAATTTATTAATAATATTGA 57 11 216 none hypothetical protein Other 5.I Unknown [1066] none YPO2201 AAAAATCACTTTGGCACTGCTCGCC 70 48 TTAAAAACGATAACCTGCGCCAAACATAAATACC 70 35 648 ompW putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2202 ATGAAGTTTTTTAAGACCTTTTCAGCT 60 30 TTACTTAATCAGCATTTGATTACTGACTG 60 31 315 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2203 ATGGAGCGTTATCAGCAACTTTTTAAGCAGTTAG 69 38 CTAGCTGCGGGTTGCCGCTTT 69 62 807 trpA tryptophan synthase alpha chain Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:4.2.1.20 YPO2204 GTTAACCCGATAAACCAACGCATAACGGACAGA 73 45 TTAAATCTCTCCCCGTGCTTTCAGAATATCG 70 42 255 trpB tryptophan synthase beta chain Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:4.2.1.20 YPO2205 GGGGTTACAAAACCGAGGGTTATAACGTTGGC 73 50 TCAGTACACGCGTAATGCCTGGAATACAG 70 48 255 trpC tryptophan biosynthesis protein TrpCF Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:4.1.1.48 5.3.1.24 YPO2206 ACATTTATTCGAAAAACTGTTCCGGGCTG 70 41 TTATCCTCTCGCTGCCAGAGCAGTAACA 70 50 255 trpD anthranilate phosphoribosyltransferase Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:2.4.2.18 YPO2207 ATGGCCGATATCTTACTGCTCGATAATATCGACT 70 41 TTACGCTAACGCCCAGGCCAGTG 71 61 579 trpG anthranilate synthase component II Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:4.1.3.27 YPO2208 ATGATGCAAACATCACGTCCTACTTTACAGTTACT 68 37 GGGCAGTGGCAATGGCGCG 74 74 255 trpE anthranilate synthase component I Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:4.1.3.27 YPO2210 ATGAAAAAAGAGTTCGTTAAAAAACAAT 60 21 TCAGTTTAATGGCGACGCTC 61 50 129 none hypothetical protein Other 5.I Unknown [1066] none YPO2211 ATGATTGTTTTGAGTGCTGAGCCAGC 68 46 TCAACGTACGAGCGGCATGGC 70 62 255 trpH conserved hypothetical protein Other 5.I Unknown [1066] none YPO2212 TTTTTATATCCACCCGGACAATCCACAG 68 43 TTACCGGAATGGCGTTACGTCCC 69 57 621 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2213 ATGAGCGAGAAGTCAGAAAAGCAAAAGTTACC 69 41 TTTTTCGGGCCACTACGGCGA 70 57 255 none putative RNA pseudouridylate synthase-familyprotein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.1 rRNA and stable RNAs [3] none YPO2214 ATGCACAGCCCGGCCGTAAA 69 60 TTACCAATCAATACCTTGCTGCGCTTTTATTC 69 37 645 btuR cobA cob(I)alamin adenosyltransferase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.13 Cobalamin [2] Porphyrin and chlorophyll metabolism none EC:2.5.1.17 YPO2215 ATGCATTATCAACCTAAACATGACCTGCTCAA 70 37 TTATTCAGCTGGACCAGGTTTACGGCC 71 52 762 none putative short chain dehydrogenase Other 5.I Unknown [1066] none YPO2216 TTGTACGGGCTGTTTCTGGCTAAAGTGG 71 50 TTATAGCAGCGGCTTCTCACCCCG 70 58 255 sohB peptidase family U7 protein Other 5.I Unknown [1066] none YPO2217 ATGCACGTAAACACAACCCC 61 50 CTAATCAATTAAATGGTACTTGGCG 60 36 252 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2217a GTGCAATTTTGCCGTCTATTG 61 43 CTAAAAGAAGGTTTTTATCTTGCTGTG 60 33 375 none hypothetical protein Other 5.I Unknown [1066] none YPO2218 CAGCCTGGTGAACTGAACATCAGCC 70 56 GGGCATCAGCCAGATAACGCAACTT 69 52 255 topA supX DNA topoisomerase I Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2219 ATGAAATTGCAGCAGCTTCGCTATATTGTTG 70 39 TCATTTCACTGGCAATTTAATATCATTAAACATGG 68 29 255 cysB cys regulon transcriptional activator Broad regulatory functions 2 Broad regulatory functions [235] none YPO2220 ATGTTTCCTCACCTCACTGATTTTGTATCACTCA 70 38 TTAATGTAAGGAGAGATCATACTCCTCGGCATCT 69 41 858 none hypothetical protein Other 5.I Unknown [1066] none YPO2221 CGTTTGGCATGAACAGCAAGGTGAT 70 48 TGCCCATCCGCATAAGTTATCGTCA 70 48 255 acnA acn aconitate hydratase 1 Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Glyoxylate and dicarboxylate metabolism. Reductive carboxylate cycle (CO2 fixation) none EC:4.2.1.3 YPO2222 ATGGTCGGTTTTGAAGAGTTGGCCA 70 48 TTATTTGGTGAGTAAATGCCCCATTTTGG 69 38 534 ribA GTP cyclohydrolase II Biosynthesis of cofactors; prosthetic groups and carriers 1.G.9 Riboflavin [6] Riboflavin metabolism none EC:3.5.4.25 YPO2223 ATGTATAACATGGCAAAACGAGTCACTATCGGA 70 39 TTACTCATGCCCCCGTTTTTCGCT 70 50 762 pgpB phosphatidylglycerophosphatase B Macromolecule metabolism Synthesis and modification of macromolecules 3.A.11 Phospholipids [9] Glycerolipid metabolism none EC:3.1.3.27 YPO2224 TTTTTATTAGTACTGGTGGTTTTCGTGATTTCAGT 67 31 TTATTCCTTGTTGACAGCAGCTGTGGA 68 44 312 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2225 ATGTTAGAAATGCTGTTTCTGCTGTTGCCC 70 43 CTACTGCCCATCTAATCCTCTGATCGGC 70 54 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2226 TGAGATATCTACCTTAACCATTAAAATTCCTCTGG 66 34 TTTTTCTTTTGAGCGGTTTTCGCACTG 70 41 303 none hypothetical protein Other 5.I Unknown [1066] none YPO2227 ATGACGTCCGCAACTAAAACTAATAACAGTGGC 70 42 TTATGCCACCTTCGTCAGTGATGCC 70 52 738 pyrF orotidine 5'-phosphate decarboxylase Purines; Pyrimidines; nucleosides; nucleotides 1.F.2 Pyrimidine ribonucleotide biosynthesis [8] Pyrimidine metabolism none EC:4.1.1.23 YPO2228 ATGAGCAATGATAATAGTCGGTTAGTTTATTCGAC 67 34 CCCCCTGCCAATTTAACTTTCATCCC 70 50 327 none translation initiation factor SUI1 familyprotein Other 5.I Unknown [1066] none YPO2229 ATGATGATTATCAATAAACGATTTGCT 60 26 TTATTTACCAACCTGATGGCCG 63 45 216 osmB osmotically inducible lipoprotein B precursor Other 5.F Adaptions and atypical conditions [36] none YPO2230 ATGCTCAACGAACTGAAGCAGCAAGTTC 70 46 TTATTGGCCGTAGTACGCATCCTTGC 69 50 696 araD L-ribulose-5-phosphate 4-epimerase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions none EC:5.1.3.4 YPO2231 ATGGCAGATATCACGTTCACTCGTGAACA 70 45 TCAGTCTTGCACGGGTTTTTCCAGC 71 52 249 none hypothetical protein Other 5.I Unknown [1066] none YPO2232 AAGAATAACGTTATCGATTCTTTATTCGTCTATGA 65 29 CTAACTCAACATCGTCGTCCCAAATGC 69 48 789 mipB putative transaldolase Other 5.I Unknown [1066] none YPO2233 GTGGTTAACTCTGGTATTCCGTACC 61 48 CTAGCACGGGCATTTCCCC 65 63 306 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2234 GACAGTGGCGCTAATCGGTGCATTT 70 52 TTTCATGGGTTGTTGGTTTGCTGGA 70 44 255 cstA putative carbon starvation protein A Other 5.F Adaptions and atypical conditions [36] none YPO2235 GCGTCGTTAAAGGTACTGAGAAAGGCTTTGGCTT 74 47 CGCAATACGTACCTCGATTTTGTCACTTTGGCTAT 73 43 255 rnb exoribonuclease II Macromolecule metabolism Degradation of macromolecules 3.B.1 RNA [13] none YPO2237 ATGTCTGAATCATCCACTGAATCTTTGTCG 68 40 TTAATGATTAACTGCCTTGGCCGGGATCAAAAA 74 39 255 none putative integral membrane protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2238 ATGAACATTATGATAACGGGGGCTGCC 70 48 CTAAATAAAGTGCTTCTCTGCCGCTAATTCAGG 70 42 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2239 ATGAATAAAGAAAAACGTGTCACTATTTTGACCCG 70 34 CTAATGCTCTGGATAGACTTTCTCTTTAAACTCGC 68 40 642 nth endonuclease III Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2240 ATGAGTGAAGCGAAAAACCTGTTAGCACAA 69 40 TCATAAGGCTTTCTCGGCATCTCCATC 69 48 702 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2241 ATGCTAAAAACAATGAGGCGTCACGG 69 46 TCATTGATCTTCTCCACAGGAGGGCA 70 50 630 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2242 TTGCCCACGCGATCCCTACG 70 65 TTATTTGTGCCCGCTTTTATGGCCAT 70 42 255 none putative integral membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2243 ATTGTTTATAGAAGAATTAATCGAGTGGATTGAAA 65 26 TTAATTCACTGCCATCAGATAACGATAGACTACGG 69 40 894 none putative AraC-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2244 AAGATCTGGGATTTCGATGGCGGTATCC 72 50 CTTGAGCGGCTTTCTTTGCTTTGACTCTGG 73 50 255 none putative iron-sulfur binding NADH dehydrogenase Other 5.I Unknown [1066] none YPO2245 ATGATGTCTTTATGGATCGCCATAGGCG 70 46 CTAATTAGGCAGATTCTTGACCGGAATAGTATTCA 68 37 567 none putative iron-sulfur protein Other 5.I Unknown [1066] none YPO2246 ATGACTGAATACCTGCTCCTATTTGTCGGC 70 47 TTAGAACTTCACCAAACCGGTAAAGCCCATA 70 42 582 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2247 ATGTCTCAACCTCAAGAATATCAACGCATTG 69 39 TCAACGCTCGGTAAAAGTGTGTTTTACACG 70 43 444 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2249 TCGCCATAGACACCTCAGTAAAAA 62 40 TTCGGTGTTATAGAGCCGTTGTAA 62 42 ~1400 none putative toxin transporter (pseudogene) Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2250 AAAAACCGCTGGACGCGTTGTTTT 70 46 TTAACGGTTGCGCCGTGGTAACC 70 57 255 none putative toxin transport protein (pseudogene) Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2252 CGGAGTCTTATTCAACTCTGGCCGC 69 56 CAATGCAGATAACCGTGCGGTTACG 69 52 255 none putative toxin transport protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2253 ATTGGTAGCCAGAATCTGTATGGCCCTAAAACCC 73 47 GATAGTACACCTCGTTCCAACGGATTTCGTTTTTG 73 43 255 araA L-arabinose isomerase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions none EC:5.3.1.4 YPO2254 GTAGCGATTCCGTTCGTGTATTGGCGGTA 73 52 CCTTGGTAACTGGCGCATAATGCGGCT 74 56 255 araB L-ribulokinase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions none EC:2.7.1.16 YPO2255 ATGCATAAATTAACTAAGGCGCTGGCAGTAGTC 70 42 TTACAATAAGCCTTTCTTCTCTAACTCGGCTTTGA 69 37 255 araF L-arabinose-binding periplasmic proteinprecursor Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2256 ATGTCAGCACCCCATTCTGCGTTACAA 71 48 CAATATTCGGGGTGCGTAACATTGCCAG 73 50 255 araG L-arabinose transport ATP-binding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2257 ATGTCTAGCGTTACTTTGAGTTCGGATAAAAAGAA 68 34 TTATATCGTCCGTTTAGCTAACTGTTTGTAACGGT 68 37 255 araH L-arabinose transport system permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2258 ATGTATCAACGCATGGTTCAGGAACCG 71 48 TTAAACCCGCACCAATGCCCC 69 57 255 araC arabinose operon regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2259 ATGGCTGATAAGATAAAAGTAGGTTTACTGGGCT 67 38 TCAATTTTTAGCAATGATCGGCAGTGCT 69 39 255 none putative oxidoreductase Other 5.I Unknown [1066] none YPO2260 ATGTCATGGTTACAACGCTTACAGATA 62 37 TCACTGAGTTTTACTGTCATTTACTGTCG 63 38 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2261 CATTATCTAACGTAGATACTGATCATTTGATTGCT 65 31 TTAAATCTCTATTCTCTTTCCATCTCGATTCAA 65 30 600 none hypothetical protein Other 5.I Unknown [1066] none YPO2262 CATTGTCGTACTCGGCGCAGCATGG 74 60 CTGGTGTTTCTTGTGACTCAGGGCCGCTAT 74 53 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2263 TTTTTCAGGGTTTGCTATCCAGAACCGGTTAATC 73 41 TCACACCGCGTTATAAACACGAGCAA 70 46 255 manA pmi mannose-6-phosphate isomerase Degradation 1.A.1 Carbon compounds [66] Fructose and mannose metabolism none EC:5.3.1.8 YPO2264 ATGGCAACTACCCGCAGTGAAAAGG 69 52 ATATCTTCCGGTCGAACCCATTCATCAAACTCT 72 42 255 fumC fumarate hydratase; class II Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Reductive carboxylate cycle (CO2 fixation) none EC:4.2.1.2 YPO2265 TGTAACTAAGCCGCCTTATTTAGAAAAGAATATGA 66 31 TTACGGTTCCAGTTCGACATAAAGATGCAA 70 40 255 tus tau DNA replication terminus site-binding protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2266 ATGTTTACCGGCCCCCTTTCTGATG 70 52 TTATGCCTTAGCACGACGTGCTCTGC 70 54 819 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2267 GTGCTGACGATCGGTTTCACTTCATC 68 50 TCAAACGGAGCAATGCTTCTGCAG 69 50 600 none LysR-family transcriptional regulatory protein(pseudogene) Broad regulatory functions 2 Broad regulatory functions [235] none YPO2268 TGGATGGACAGCCTGGACATATTGATCAGATC 73 47 CTAGCCTTGAAGCAACTTCACTAATAATGAGCCAT 70 40 255 mlc putative ROK family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2269 ATGTTAACGCGTTTATTTGTGACAGGTACCG 70 42 AGATCTAAATATTTTGCTAATGGTTTTTCTTCTGG 65 29 669 bioD putative dethiobiotin synthetase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.1 Biotin [8] Biotin metabolism none EC:6.3.3.3 YPO2270 ATGAAACGGCCAATCCATCTCTATTACTACCG 70 44 TTAGTGAGACCGATATACCGATATTGGGCG 70 47 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2271 ATGATGAACTTAGGTTATCACATTCGT 60 33 CTACAGCACTTTTAGTTTCGTTAATTCA 60 32 264 none phage hypothetical protein Other 5.I Unknown [1066] none YPO2272 ATGAGAAGCGAAAACATCAGAGTC 61 42 TTAATTAAACCACTCTTTTTGAGTTATGAGC 62 29 408 none phage hypothetical protein Other 5.I Unknown [1066] none YPO2273 ATGGGCAACAATGAGCATGAAGTTATGG 70 43 AGTACTGTAAGTGTATGAACTTAAGGCAGAAACCT 65 37 447 none phage hypothetical protein Other 5.I Unknown [1066] none YPO2274 ATGATCGACTGGTTTACCGGAATCCTG 69 48 GCCAGTTACTGGCATGTGAAATACGGTTATAATC 70 41 255 none putative phage protein none YPO2275 TAATTATGGTCTTTTTGTAAAAGGTAAAATGCTTG 65 26 TCAGCCTTTTATTTCAGTAATGCCGCC 69 44 318 none putative phage protein none YPO2276 ATGGATACATCAGGTTTCGATATTCA 62 35 TCAAGCAGTACGAACCATCTTTATT 60 36 252 none putative phage-related membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2276a TTGAATGCGAACCTTTTAAAATG 60 30 TGCGGATTTAACGGTACGC 62 53 270 none putative phage-related membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2277 CTCAGCTTATGTCGTTATTCTTGGGCTAAGAGGCT 72 46 CAGAAATATGGTTTCTACGGCGCTTCTGTTCTGCT 74 46 255 none phage hypothetical protein Other 5.I Unknown [1066] none YPO2278 ATGTTTGGGATTCTGATTAGTGCA 62 38 TCACCCTATAACAGGAATACGTCG 61 46 288 none putative phage-related membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2279 ATGGCTATTTCTGCATATATTGGCATACCTGG 69 41 TTTTTCCCCGTATAAAGCGTCACACG 69 46 255 none putative phage-related membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2280 TGAAAAAGATTTTACTTGCATTAACGCTACTATTT 65 26 TCAGTTTAGGTTGTCCCGGAACAGTTCA 70 46 255 none putative phage-related secreted protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2281 ATGGCTGATTCGGCGCGGC 73 68 TCACCAATCAGGCCTGTTCA 63 50 249 none phage hypothetical protein Other 5.I Unknown [1066] none YPO2282 ATGGAGGGGCCCAGAACCT 65 63 CTATGTGAAATCGCTAGGGGTATC 60 46 111 none hypothetical protein Other 5.I Unknown [1066] none YPO2283 ATGAAACGTGCATTAACTTTGATTG 61 32 TCACTTTTCATCCGTCGTTGAC 62 45 none putative LacI-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2284 ATGCGCATACATCAGGAAAATACCGCTAA 70 41 TCATGTCACCACAACACCATTGAATGTATG 69 40 471 none hypothetical protein Other 5.I Unknown [1066] none YPO2285 ATGCAGTCAATGCTTCAGGCAAATCC 70 46 TTACTCTGACATCACAAACGGTGATGTATATTTGT 68 34 351 none putative ribose-binding periplasmic protein(partial) Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2286 AAAAATCATTCATAGCAATATCTGCCTTACCATT 67 29 TTATGACCCATTAACCCCAATGCTTTTCTTT 69 35 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2287 ATGCCAACTATTGTGCTGTTAATGTGGCA 70 41 TCAGTTGCCTATTCCTCTGTGCCAGC 70 54 780 none putative transport system permease Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2288 CATTGATAAGCTGGAAATGCTCTATGATGCAGCGT 74 43 TGTTTCCATGGATGAATGTGGAGAAAAATATAGCA 72 34 255 amn putative AMP nucleosidase Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Purine metabolism none EC:3.2.2.4 YPO2289 GTGGCAAAATCATTTTTACGCAGTGGAA 69 39 CTCTCACGCGTCATCGTCATTGAAAGGGT 74 52 255 none putative virulence factor Other 5.I Unknown [1066] none YPO2290 TGGTTGAAGACCATGCCGATGAAAG 70 48 AACCCAAGGGAGAGAGAACCCCTGA 70 56 255 none putative virulence factor Other 5.I Unknown [1066] none YPO2291 AGTACCCGCCAACATGCTGTTCGTT 70 52 GCGACCAGCAGTTCTATCGTGGGTT 70 56 255 none putative virulence factor Other 5.I Unknown [1066] none YPO2292 AATCTTTACCCTTAATTTTAATGGCTATCTTAGCC 65 31 TCATAGCGCCCGTAGAACAATAATTCCC 69 46 795 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2293 CAATTGATAGTTCGGTTACTGGAACAACAAGGCAT 72 40 CACCATTGGGTAAACTTTCTCATCCACATTGATCA 74 40 255 ilvB putative acetolactate synthase large subunit Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Valine, leucine and isoleucine biosynthesis. Butanoate metabolism. C5-Branched dibasic acid metabolism. Pantothenate and CoA biosynthesis" none EC:4.1.3.18 YPO2294 ATGATAAATCAACCAATACCCACTCGGGTC 69 43 TCACCTTTGATTGGCAACCAAGTCTTCTACT 69 42 303 ilvN putative acetolactate synthase small subunit Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Valine, leucine and isoleucine biosynthesis. Butanoate metabolism. C5-Branched dibasic acid metabolism. Pantothenate and CoA biosynthesis" none EC:4.1.3.18 YPO2295 ATGAAATACCAATGGATATTGTTCGATGCG 69 37 TTATGCAAATAATAACGCCTGCAATTCGG 69 38 675 none haloacid dehalogenase-like hydrolase familyprotein Other 5.I Unknown [1066] none YPO2296 GGCAAGAGTTCATCCAGCAGATGGGTGAGTTAC 74 52 TCAGGCCAATAATGCAGCCGAGA 69 52 255 none hypothetical protein Other 5.I Unknown [1066] none YPO2297 GTGGCGAAGAGAAAATCTACCGGTACCG 71 54 TCAATGATCTGTTTTGGTTAATGGCTGGA 69 38 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2298 GTGTACCTACTTTATCCGGCATAGCATTATCATCC 69 43 CATCGCATCCCGCATGGTGAAGA 73 57 255 phoA alkaline phosphatase precursor Central intermediary metabolism 1.C Central intermediary metabolism [63] Glycerolipid metabolism. Folate biosynthesis none EC:3.1.3.1 YPO2299 ATGAAAACGTTCTTTATTGATCGGATGGC 69 38 GCAACCTAAAAGATAACCCTCATGTACTAATAACC 66 37 519 ogt putative methylated-DNA--protein-cysteinemethyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2300 ATGATCCCTGAAAAACGCGTTATCCG 70 46 CTATAGCCGAGGTTTTGGGTTACCTGCC 70 54 753 fnr nirR fumarate and nitrate reduction regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2301 ATGGGAAAGTATCAGAATATTCTGGTTGCTATCGA 70 37 TTACTCAGCATCCTCCTGATCTTCATTGC 69 45 255 none putative stress protein Other 5.I Unknown [1066] none YPO2302 ATGTCTAGTGGTCTCGTTACAGCTGCGTACATAG 69 47 ATTCAGTGCACGTAAAATAGCTTCTACGCTGTCT 70 41 255 pntB NAD(P) transhydrogenase subunit beta Central intermediary metabolism 1.C Central intermediary metabolism [63] Nicotinate and nicotinamide metabolism none EC:1.6.1.2 YPO2303 GTATTGGTGTACCAAGAGAGCGGTTGGCCAAT 74 50 GCTGGGTGACAGTGAAGCCACCAAAAATGT 74 50 255 pntA NAD(P) transhydrogenase alpha subunit Central intermediary metabolism 1.C Central intermediary metabolism [63] Nicotinate and nicotinamide metabolism none EC:1.6.1.2 YPO2304 GTGCTATTTATTTACATTTTTGCAACG 61 30 CTAATGATCCATATCTGTGTGAGCTTC 61 41 204 none hypothetical protein Other 5.I Unknown [1066] none YPO2305 ATGAAGCTGAAATACACGATCATCGCATC 69 41 TTATTTGAATAAATCGGCACTGACGCTCAG 69 40 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2306 TTGGAAAAGAAACTCGGTCTGACTGCG 70 48 CTAGTGCATCATCAACCATGTCGCTGGG 73 54 255 none putative amino acid antiporter Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2307 ATGAGTGGCGAACGCGTCAGTG 69 59 CTAATCATTTGGCATTTGGGATAAATTCACAGA 69 33 417 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2308 ATGAGCAAAATTGTTTTTGTGGAAGACGAC 69 37 TTACTGCTTGGACTCCCAGGCATTG 69 52 747 rstA urpT two-component regulatory system; responseregulator protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2309 ATGCTGGTTGGCCTGGTTTATAAGGTCA 70 46 TTAATTCTGATCAGCGGATAGAGGCAAATGT 69 39 255 rstB uspT two-component regulatory system; sensor kinaseprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2310 CTTATAACCATCTGTGTACTGCCTTTACACGCCTT 70 43 TCAGAGATAACGGCGTTCTAAATGCTGG 69 46 255 none putative carboxypeptidase Other 5.I Unknown [1066] none YPO2312 TATCACCCACCATCAGTACGACGCC 69 56 TTTATTTGCCGTCCGTTTGAATGCC 70 44 255 none putative insecticidal toxin complex Cell processes 4.I Pathogenicity [38] none YPO2313 GTGCCCCATAAGTTGTTACGTG 62 50 TTAAAAACCAAAAATTGGACTATGTTCT 61 25 357 none hypothetical protein Other 5.I Unknown [1066] none YPO2314 ACCCTGTATCACGTTGGGATT 60 48 ATCTTCATGATAAATACCGGTAGCTTC 61 37 207 none putative invertase protein (partial) Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2315 ATGATTAATAAGACCCTGTTGGGCCTGAGTC 69 45 TTATTTAACCTGAACACCTTCTACTGACAGGATCA 68 37 579 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2316 ATGCTTTTAAAAAATACGAGGGAGC 62 36 TTAATCGATGCTACGTCCTAGCA 61 43 555 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2317 TTGGGCAATACGGCAAACG 65 53 TCATGATTCGTTCCTCAGTGTTC 61 43 213 none hypothetical protein Other 5.I Unknown [1066] none YPO2318 ATGAAAACAGTATTGACTCTGATTGTTG 61 32 CTATTTAGCCGCTGGTGCTACG 63 55 285 asr putative acid shock protein Other 5.F Adaptions and atypical conditions [36] none YPO2319 TATTACTTAGCTTGCTACTTATTTCCATTACCACC 65 34 TTACTGAGTTGTATCGGCTATCTTATTGACCAATT 67 34 837 none putative pepetidase Other 5.I Unknown [1066] none YPO2320 AAAAACAGACGATTTTGACATCATTCCTTTTGC 70 33 TTACTCCTTAGTCGCATAAGATGAGTTTGGGTTG 70 41 324 none putative DNA-binding phage-related protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2321 TTGTTACGGTTGGCACAGAGG 63 52 TCATGACTGCAATCTCCGTTT 61 43 315 none putative phage protein none YPO2322 TCAAACAGTGAGCAGAACCGGGTGT 70 52 CTTTAGGGCGGCAAGATCTTTGCCT 69 52 255 hrpA ATP-dependent helicase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2323 ATGAGTAAAGTACTGGTCCTGAAATCAAGCATCTT 68 37 TTAAGCAGCCACTACCTGAGCCAATAATGTTT 69 41 606 acpD acyl carrier protein phosphodiesterase 1.H Fatty acid biosynthesis [33] Pantothenate and CoA biosynthesis none EC:3.1.4.14 YPO2324 ATGCATAAGAGTGATAAGAAACTGGATCAGGCG 71 42 TTATGCCTTTTCTTCCGCCAGCAGA 70 48 255 none putative transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2325 GACCTGAAATCACCCCCTGCTGTGTG 72 58 TTAACGGTTAGTGCTAACCCAAGCAGAGACA 70 45 255 dalD putative mannitol dehydrogenase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions. Fructose and mannose metabolism none EC:1.1.1.11 YPO2326 ATGAAAAAGCATACTTTAGGCTGG 60 38 TTAGCGTTTCATCCACTGGC 61 50 372 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2327 ATGAAGATTTTGACAGGGGAGCGTGTG 70 48 TTAGAAGAGATTGGATTGATTTTTAAGCAATGCT 67 29 195 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2328 ACACTCGGTTATCAGGGGCAGCAAC 70 56 AGAGGTTAGCGTCAACTGCCCCAGA 70 56 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2329 ATGAAATTAGCCGTTTACAGTACCAAGCAGTATGA 69 37 TCAGAGGGTGATGATATTTGGGCAGG 69 50 255 ldhA hslI htpH D-lactate dehydrogenase Energy Metabolism 1.B.8 Fermentation [3] Pyruvate metabolism none EC:1.1.1.28 YPO2330 ATGAGAAAGTTCGTTCCAGTGGCTATTATCG 69 42 TCAGTTAACCCAATCTTTCTGTTGGTAAACTAAGG 68 37 453 hslJ putative heat shock protein Other 5.F Adaptions and atypical conditions [36] none YPO2331 ATGAGAATATTTCAGGGAGTAGTGTGC 62 41 TTAACGCACCGGGCATGCA 69 58 342 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2332 ATGATCACTGATTTATTGTTACGAATTACCCTAGC 67 34 AACTGATGTATTCCCTCAATAGCTAATAATTGTTC 65 31 660 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2333 ATGAGCAGTTTTGTCTATTTATTTATGGCGATT 66 30 TTAATGCATCGGTGTCTTGGACAGGAG 69 48 333 qacE quaternary ammonium compound-resistance protein Other 5.D Drug/analogue sensitivity [28] none YPO2334 ACTTACCACGCCCCCGGTTTACAGT 70 56 CGTCTGATTGAGCTGTGCCCCAATA 70 52 255 nifJ putative pyruvate-flavodoxin oxidoreductase Other 5.I Unknown [1066] Pyruvate metabolism. Propanoate metabolism. Butanoate metabolism. Reductive carboxylate cycle (CO2 fixation) none EC:1.2.7.1 YPO2335 ATGCTAGAAAAACAATCGGTTAATCAGAAAGAACA 68 31 TTATTTAATTTCCAACACATCAAGGCGTACTGGT 70 35 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2336 ATGAAGGTATCTATAACACTTCCGTCTGCATTGTT 69 37 TTACTGGCTATGAATATGGCGGGCAAG 69 48 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2337 ATGTATAAAATAAAAAAATTCTCTCAAATAACG 60 18 TTAATTTGTTGATGAAGGAGTCAATACTG 62 31 840 none putative regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2338 ATGATGAATGTTAAACAAGAGGATGCTGTTGTG 69 36 CTAAAGCCATTTACTGCGCTTTAACCACCA 70 43 255 none CorA-like Mg2+ transporter protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2339 GTGCCGTAGTAGTCGGTTCAGTACTGGGAGC 72 58 GACTGTAAGCAACATCTTCTGGATTGGTTATCGGG 73 46 255 mppA putative periplasmic murein peptide-bindingprotein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2340 CTTACTGAATCTGAATAGTGGCACTATAAATACCA 65 34 TTAATCCGCCAACGTCAGTAACTCAATGAA 70 40 771 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2341 ATGAGAACAGTGCGTTTTTACCCAGAGG 68 46 CTAGCGTACCCGTAGGTCTATCGTACCAGTAGAAA 70 49 255 none putative mandelate racemase / muconatelactonizing protein Degradation 1.A.2 Amino acids [23] none YPO2342 ATGACACAGACCGTACATTTCCAAGGCA 70 46 TTATTTCAGTGCAGCCAGCGCG 69 55 504 tpx thiol peroxidase Cell processes 4.G Detoxification [10] none YPO2344 GGCTCGGTCTCACCAGAGAGTTGCTTGATC 74 57 TAAACCATACTCCCGTAATTTATTGGCGATCGCAG 74 43 255 tyrR transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2345 ATGAGAGCGTACCGCCCAAACCC 71 61 TTAAGTAAAGACGCCGTGTTCCAAACGAC 69 45 447 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2346 ATGACGCTATACCGCATTGTTATGCGC 70 48 CTATTTTAACCGTGGATCAAAGACAAAAGAGAGC 69 38 459 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2347 ATGAGCGAACCGTTAAAGCCACGG 70 54 TTTTTCGGTAACGTATTTTTCAGTTGATTCATCAA 69 29 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2348 ATGAAACGACTGCAAAATGAGCTTACATCATT 69 34 CAATTTATCTCCCAATAAAAACTCCATCACCGCAT 72 37 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2349 ATGGCGAATGTGTTAGGCAGTAAAAA 65 38 CTACAACTGACGGAACCGGCTTCG 69 58 360 pspC phage shock protein C Other 5.F Adaptions and atypical conditions [36] none YPO2350 ATGAGTATTCTGTTTCTTGCCATACCCTTAACCA 69 38 TTATGACTGTCTCCAGTTAGGGTGTTCTGTATCCA 70 43 228 pspB phage shock protein B Other 5.F Adaptions and atypical conditions [36] none YPO2351 TTTTTCTCGCTTTGCCGACATCGT 69 46 CTATTCAACTGATTTCATTTTCGCTTTTAATGCC 69 32 666 pspA phage shock protein A Other 5.F Adaptions and atypical conditions [36] none YPO2352 ATGAATGAGCAACTGGATAATCTGCTCGG 70 45 TCACTCACCGGAATCACTGACTTGGG 71 54 255 pspF psp operon transcriptional activator Broad regulatory functions 2 Broad regulatory functions [235] none YPO2354 GTGTTATTAGCACCTCTATTGGGG 60 46 TTAGTGTGCGGGGAAAAATTT 61 38 186 none hypothetical protein Other 5.I Unknown [1066] none YPO2355 GCTGTTGTCGCTGATTTGCCTTGCAA 73 50 GGCGAAAGAAGAGTTACCGAACGGGC 72 58 255 sapA peptide transport periplasmic protein precursor Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2356 ATGATTATTTTCACATTACGGCGATTATTACTGCT 68 31 TTATCGAAGGGCATACCATTCCTTATGCTTTAA 69 36 255 sapB peptide transport system permease protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2357 ATGCCCTTCGATAATGTCTACCGCG 69 52 TTATTCCACCCCCGCATTAATGGC 69 50 891 sapC peptide transport system permease protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2358 ATGCCATTACTTGATATTCGCAACCTTACCA 69 39 TTATTGCTCCTCCAGATTTAAGGGGAAATGA 69 39 255 sapD peptide transport system ATP-binding protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2359 ATGGCCGAGACGTTGCTCGAAG 69 59 CTAAAAATTGCTGGTATCTCGACGCCAG 69 46 816 sapF peptide transport system ATP-binding protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2360 ATGGTGCAATTTCGTAGGAGAAATAATGCC 69 40 CTATTTTCCTAACGTATGTCGTAGGCGGTTG 69 45 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2361 AACAGCAAACAACAACCAACCAGAAAGCATCAGTA 73 40 GACATCGTTGTGATCGCTAGGGGCCAG 74 59 255 none putative proton dependent peptide transporter Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2362 ATGGTCAACCATGTTTGGGGACTTCTG 70 48 TCAAATTAATCGCGAGCCATAGCCC 69 48 591 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2363 ATGAAAAAGCTAACATTAAAAGAGATGACCGAAAG 68 31 TTACCGTGGTGGACGCGTGCT 70 62 264 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2366 AATTATCAATACAACTATCAATACACTACAGCG 62 30 CTAATGCAGGATAGCGAAAAATACA 61 36 120 none putative membrane protein (pseudogene) Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2367 ATGAAACTGTTCTATAAACCGGGTGCTTGTTCT 69 39 TTACTTGATATCTTCGGCGGCTAAAGCTG 69 45 606 gst glutathione S-transferase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.10 Thioredoxin [10] Glutathione metabolism none EC:2.5.1.18 YPO2368 ATGAAAAATATACTTTCTATTCAGTCACACGTCGT 66 31 TTACAGCCTAACCGCTGTAAACTGGCAGATA 70 45 861 pdxY pyridoxamine kinase Central intermediary metabolism 1.C Central intermediary metabolism [63] Vitamin B6 metabolism none EC:2.7.1.35 YPO2369 ATGACTAGCAGCAACCTGATTAAACAATTGCA 70 37 TTACAGCCAACTAATCAGGCAATAGTGTTTTT 67 34 255 tyrS tyrosyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] "Phenylalanine, tyrosine and tryptophan biosynthesis. Aminoacyl-tRNA biosynthesis" none EC:6.1.1.1 YPO2370 ATGATTGTGATTCTGTGGCGGCG 70 52 CTAAGGGGCTAAACGGTCAATTTTCCAC 68 46 723 pdxH pyridoxamine 5'-phosphate oxidase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.6 Pyridoxine [4] Vitamin B6 metabolism none EC:1.4.3.5 YPO2371 ATGATGAAATATCTATTTGCAGCAACAGTACCGTT 69 34 TTACTTGATCAAAACACAATCATTAATGATGACT 65 26 318 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2372 ATGAAATCAGGCCGTTTTATTGGAGTGATG 70 40 TCACCATGATGATACAGGATGGACTGCT 69 46 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2373 ATGATTAAGCCATTCGTCGCCGTTG 70 48 TCAACGCGGGCTGACGGTTATT 69 55 468 slyB pcpY pcp putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2374 TTGGAATCGACATTAGGATCTGATCTAGCAC 68 42 TTGAATAATATTTTTCTCAAGCTTATCGATTAGGC 66 29 432 slyA MarR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2375 ATGGATACACGTAGCCAACTGGCTTCGC 72 54 TTAAGGGACATCGTAGCCCAGCGC 70 58 897 none putative aldo/keto reductase Other 5.I Unknown [1066] none YPO2376 ATGAATCAGTCTTCAATTAAGGTATTAGTCGTAGG 65 34 TTAAAACAGAGAGGGTTGTTCCGGCAA 69 44 282 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2377 ATGAACGCTCGATATAAATTACAGTGTAACGGATT 68 34 CTATTGCAGACTCCGGCATTTTTGCA 70 46 1638 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2378 ATGAACAAAATACAGCATACACATGTAGACACCCG 71 40 TTAGGCTGGTTGTAATATGAGTTCAATGCTTCC 69 39 600 none TetR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2379 ATGAAAACTGCTAAATTATTCTCCCCATTAAAGGT 67 31 TCACAACGTTGGGTAATCGGTGTAGCC 71 52 255 none NADH:flavin oxidoreductase / NADH oxidase familyprotein Other 5.I Unknown [1066] none YPO2380 GCGGAGCAGGTTATCGTTCAATCGT 69 52 TGTCGTCAAAAACAGTCCATTGCCC 69 48 255 sepC insecticial toxin Other 5.A IS elements; Phage-related functions and prophage [210] none YPO2381 ATGCGCTTACTCCATACCATGCTCCG 71 54 TCAGTTTCCGAGGCAGTCACCCG 71 61 408 gloA lactoylglutathione lyase Central intermediary metabolism 1.C Central intermediary metabolism [63] Pyruvate metabolism none EC:4.4.1.5 YPO2382 ATGCACGCTGAATTCGATAAAGATAAGAAACTG 69 36 TTACCCCGATTCTGCCGCTGG 70 62 681 rnt ribonuclease T Macromolecule metabolism Degradation of macromolecules 3.B.1 RNA [13] none YPO2383 ATGACGACGATTGATAAAATTCAGCGCC 70 43 TTACTCTGCGGCAGGCTGATCTTCTT 69 50 351 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2384 ATGGCGTTGCCATTGTTGT 62 47 TCACGACAGGAATAAAACGCC 62 48 222 none hypothetical protein Other 5.I Unknown [1066] none YPO2385 ATGCGTTTAATGCTTACGCTGTTTGTGC 70 43 CTAACGAATAGTTTTAGGTGTGACGACGCG 69 47 852 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2386 ATGTCTTTTGAATTACCTGCATTACCTTACGCG 70 39 TCAGTCTAGGTTTTTCTCAGCGAAAGACCAGTTA 70 41 579 sodB superoxide dismutase [Fe] Cell processes 4.G Detoxification [10] none YPO2387 ATGGCAACGATTAAAGATGTGGCCAA 69 42 TCAACGGCGATAATCACGGAAAGG 69 50 1026 purR purine nucleotide synthesis repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO2388 ATGTGGTCAGAATATTCTCTGGATGTGGTCG 71 45 TCAATTGTTTGCTATCAATTGCTGGCTATCAT 69 34 255 none LysR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2389 ATGAAAACGTCATCCAGTTTCATGTTCTATCTG 69 36 TTATGGTGTCCGAGTCATCAATCTGGTTTT 69 40 255 none putative drug resistance protein Other 5.D Drug/analogue sensitivity [28] none YPO2390 ATGAGTTCATCCTGTATAGAAGATCAGAGTGTTCA 67 37 TTAGCGAGGGACGCGAATCCC 69 62 1152 cfa cdfA cyclopropane-fatty-acyl-phospholipid synthase 1.H Fatty acid biosynthesis [33] none YPO2391 ATGTTTACCGGTATTGTTCAAGGCACCG 70 46 TTATGACACCCGTACGAATTTTTCGTCCA 70 41 657 ribE ribC riboflavin synthase alpha chain Biosynthesis of cofactors; prosthetic groups and carriers 1.G.9 Riboflavin [6] Riboflavin metabolism none EC:2.5.1.9 YPO2392 GTGCAGAAGTATATAGTTGAAGCGCGTAGCTTG 70 45 GGCTGCCCGTTGCAGAATAAACGCAGTA 74 54 1374 none putative transport protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2393 GTTTGTACTATCGGTCCAAAAACCGAATCCGAAGA 74 43 TATAACACGTGTACTGAAGAGGTATTGGTCGTACC 68 43 1413 pykF pyruvate kinase I Energy Metabolism 1.B.1 Glycolysis [12] Glycolysis / Gluconeogenesis. Purine metabolism. Pyruvate metabolism.Carbon fixation none EC:2.7.1.40 YPO2394 ATGAATCGTACTAAACTTGTACTGGGCGCG 70 47 TTACTTCTTGTAAGCTTGAGCTTGGTTGTCAAGAC 69 40 237 lpp mlpA major outer membrane lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2398 ATGAAACGTGCATTAACTTTG 56 33 TCATACAGACTCCCACGCCAA 64 52 none putative exported protein (pseudogene) Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2399 ATGGCTGGTTTGCCAGATAGAGATAAATTAATTCG 70 37 TCAATGCGCTGATAAATTGGCAACTTTAGT 69 37 423 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2400 ATGAATTTTCCTATTGAACGTGTAAGAGCTGATTT 68 31 TCACCCCAGCAATTTTTCGATACGC 70 48 1221 none putative selenocysteine lyase Central intermediary metabolism 1.C Central intermediary metabolism [63] Selenoamino acid metabolism none EC:4.4.1.16 YPO2401 CTGGCTTACCGACCAACAGTAAC 62 52 AACGCTCAGCAATACGTGCTAAC 62 48 1326 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2402 TTAAGAATTTAAAAGTTAGCGTTGAAGGTAATGAA 65 26 TTACTGTTGGTCGGTAAGCCAGCCA 69 52 747 none putative ATP-dependent transporter Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2403 ATGACACGAAGCAATGTAGAAATTCCAGATGAT 70 36 TAATGGCTAACAATTTTTGTGCTTCGACAGCAAAT 72 34 1512 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2404 ATGCAACAAGAATCAGTTGGGACATTTTCTC 70 39 TCAAACGCCAAAACTCTCGCCAC 69 52 372 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2405 TTGGCCTCTGACTTAGCAAGG 62 52 TTAGGAAAAGTGCCGTTTTGAC 61 41 159 none hypothetical protein Other 5.I Unknown [1066] none YPO2406 ATGCTTTGGAAGCGTGCAGCG 69 57 TTAGCGCGTCAATACGGCGATCG 71 57 417 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2407 GAAGCAAAACGGTTTTACCGGCGAT 70 48 TTTATCGGGCACTGTGTCGAACAGG 69 52 3057 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2408 ATGGGAATGATTATCGCCAGTTTTTGG 69 41 TTAAAGCTCTTCTAAATGCTTAGCGGCATCG 70 42 1041 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2409 GCTGTAATGTGCTTTGGTACAACC 62 46 TTTAACGGTAAATCAGGCAGTTCA 62 36 ~1400 "ppsA, pps" phosphoenolpyruvate synthase Central intermediary metabolism 1.C.2 Gluconeogenesis [5] Pyruvate metabolism. Reductive carboxylate cycle (CO2 fixation) ppsApps EC:2.7.9.2 YPO2410 GTGGAAAGATGTGTATTTTATATTTCGGATGGTAC 67 34 TTAAAACATCCGACGACTCATCCCTAAGATATCC 70 41 822 none Conserved hypothetical protein Other 5.I Unknown [1066] none YPO2411 ATGTACAAGATAGATGAACTGCGGACCGC 70 48 TTAAAACCGGCTGTCTACTGCATCTGC 68 48 1047 aroH phospho-2-dehydro-3-deoxyheptonate aldolase Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:4.1.2.15 YPO2412 ATGAAACCCAGAATGGAATACGCCCC 70 50 TTACCAGTGGGCCATTAAACGCGC 71 54 723 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO2414 ATGTCATCCCTTCGTTTACTCATTTCTGATTCTT 69 35 TTAGCGTAATACTTCTACCAGCCAATGGCAG 69 45 1017 lplA putative lipoate-protein ligase A Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2415 ATGCGGACGCGCTTTTGGATT 69 52 TCAAATACGCCGTGCCTGCCA 70 57 465 nlpC putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2416 ATGAAAGGGTATCTGTGGGGG 62 52 TTAGCTAGCTTTTATAGGTTTTATATTAATCAGC 61 26 387 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2417 ATGAACAGCTACCTACTCTTGCTGA 61 44 TCATAGGTGCCAACTCATTAGCA 62 43 345 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2418 AATTATTAAAAGACAGTGGCGCAGCATTATTGGCG 74 40 CTGGTACCACAACAGGGCGAGTCGATTCATTA 74 50 1665 none dolichyl-phosphate-mannose-proteinmannosyltransferase-family protein Other 5.I Unknown [1066] none YPO2419 ATGAAGCAAGTTGGCCTGAGGATTGA 69 46 TCATTCAGCATCCTTTATGTCTGATTGACAAC 69 37 906 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2420 TGAAAGCGATTGTATTTGCCTATCATGA 67 36 TGCGTTCAACTCATCTTTAGGGGCTG 69 50 2004 none probable formyl transferase Other 5.I Unknown [1066] none YPO2421 GTGTCACTAAATGAACCAATTAAGAAGGTCTCCA 68 38 TCATTTTTCTACATCCTGATTATTTTCGGTCTGC 70 35 984 pmrF probable glycosyl transferase Other 5.I Unknown [1066] none YPO2422 TTTTTGCCTTTTTCTAGGCCAGCAATAGGT 70 40 TCATTTAGTGACACGGTGTGACCCTATAATTGTT 69 38 1155 none conserved hypothteical protein Other 5.I Unknown [1066] none YPO2423 ATGCTATTGCAACTCAACAATGTCAGCGT 69 41 TTATACGCTTCTTGTGGTAATCCACTGCTGTTT 69 39 759 btuD putative vitamin B12 transport ATP-bindingprotein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2424 ATGAGTCACCCAATTTACGCCATTTCAGT 69 41 TTAGTGGCTAGCCAGTGCCTGATTGATG 70 50 555 btuE putative vitamin B12 transport protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2425 ATGGCCGAGGGTGTAATGCAGACA 70 54 TCACTTTACTCCTTTCACCCGTATCAGTAACCA 70 42 1023 btuC puative vitamin B12 transport system permeaseprotein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2426 ATGCCATTGATTGCGCAGTCTGA 69 48 TTAACGATGGCCATGATTATCCTGTTGAG 69 41 420 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2427 ATGGCGCTTACTAAAGCTGAAATGTCAGAAC 69 42 TCACTCTTTTGGAGTGGCACTCTCTACCC 70 52 297 ihfA himA hid integration host factor alpha-subunit Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2428 TGCTGTGCTCTTTTTCTGAGCTGGC 69 52 TGCCTCTACGCATTTTGCAACGGTA 70 48 2388 pheT phenylalanyl-tRNA synthetase beta chain Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] "Phenylalanine, tyrosine and tryptophan biosynthesis. Aminoacyl-tRNA biosynthesis" none EC:6.1.1.20 YPO2429 ATGCCACATCTCGCAGAGCTGGTT 70 54 TTACTTAAACTGTTTGAGGAAACGCAGATCGTTT 69 35 984 pheS phenylalanyl-tRNA synthetase alpha chain Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] "Phenylalanine, tyrosine and tryptophan biosynthesis. Aminoacyl-tRNA biosynthesis" none EC:6.1.1.20 YPO2430 ATGGCTCGCGTAAAACGTGGTGTG 70 54 TTACGCCAGAGCTGCTTTCGCTTTT 69 48 357 rplT pdzA 50S ribosomal protein L20 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO2431 ATGCCAAAAATTAAGACAGTACGCGGC 69 44 TTATGCGTACGGCAGACATGCTACGA 70 50 198 rpmI 50S ribosomal protein L35 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO2432 ATGGATTACGGCAAATTCCTCTACGAGAAGA 70 42 TTACTGTCTCTTCTTAGGTGCGAGCACCA 69 48 351 infC fit translation initiation factor IF-3 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO2433 GCTGTTTCTGTCCTTGATGTTGCTCTTGATATCGG 74 46 CGTCTAAACTTCCTAAGTCTTTACCGCGGCGAGTA 73 49 1929 thrS threonyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] "Glycine, serine and threonine metabolism. Aminoacyl-tRNA biosynthesis" none EC:6.1.1.3 YPO2434 TTGCAGCGACAACCTGTTT 60 47 CTACCCAATTTTGCGGCAC 61 53 213 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2435 TTGAATAAGCATGTTGGTTGGC 62 41 TCATTTAGCCAGAAAATAAAACGC 61 33 378 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2436 TTGGTTCAGCGCCCTCTAT 61 53 TCAGAGTCTTTTTCTGGCTGCA 62 45 315 none hypothetical protein Other 5.I Unknown [1066] none YPO2437 ATGCTAAGTATTTTCGAATTATTTAAAGCCGTTGG 68 31 TTAAGCCATGACAGGTTGATAAGTTGAGATCAAC 69 38 684 marC multiple antibiotic resistance protein Other 5.D Drug/analogue sensitivity [28] none YPO2438 GTGAATTCAAAAGTCGGTTGCCTAATGGC 71 45 TTACTCTGACATCGCCCGGTAAGCG 70 56 663 none putative membrane-bound lytic mureintransglycosylase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Nucleotide sugars metabolism. Aminosugars metabolism none EC:3.2.1.- YPO2439 AAAAAGTCCTTATCTCAAAATGATAGAACGACTAA 65 29 TCATTGACCGAATCCTTTAGCGATAGTATCTACAG 69 40 969 yfeA periplasmic-binding protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2440 ATGAGCCACCCTGTTTTTGTCCGC 71 54 TCAGGAATTTTGCTCCTTTGACTGGCTT 70 43 891 yfeB ATP-binding transport protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2441 ATGCTGGAACTTTTACTGCAACCGTTTAATTATAA 68 31 GTTATCCTCCGGAAGATGAACCGGC 70 56 885 yfeC chelated iron transport system membrane protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2442 ATGAATATGCTGTTCAGTTTGATCAGTGAGCC 70 41 CTATGGCAGGTTACTTGGGGCTGTATTTTCT 69 45 894 yfeD chelated iron transport system membrane protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2443 ATGGCTGTCAGCATTAATGCC 62 48 TCACATCGTTAGGTTAACGTCTTTATG 62 37 213 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2444 ATGTGGCAAGCAGTGAATCGTCTGTTAAGT 70 43 TTAAAGCGAAAACTGTTCGGGATGCA 69 42 876 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2445 ATGACCTATCAACAGGCTGGGCGC 71 58 TTATCCCTGAATCATAATGCCAAGTAACTTAATCA 67 31 555 yfeE putative yfeABCD locus regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO2446 ATGGCGACCGCTCATCCAATTAAAG 69 48 CTACGAGATGTCGTCCTTGCGCAATT 70 50 666 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2448 ATGGATTATGATTTGATTGTTATTGGCAGCG 69 35 TTATCGGAAGCGAGCTAAAGAAAAAGCTGAG 70 42 1116 solA soxA putative sarcosine oxidase Other 5.I Unknown [1066] "Glycine, serine and threonine metabolism" none EC:1.5.3.1 YPO2449 ATGAAAATATTAATCATCGACGAATGC 62 30 CTAGTACAAATACTTAAACACATTATAAATGAAAC 58 23 615 none putative LuxR-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2450 ATGACAACACCTGTGGTGAGTAACCAAGGG 71 50 TCAGAGCGCTTGCTCTTCTTCAACCTTA 69 46 1059 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2451 ATGCCAGTGTTACATAACCGAATTTCTAATGAGG 69 38 CTACTTTTCATCCGCACTCTTTTCTGGC 68 46 1068 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2452 ATGTGTCATGGCGGTGTTTC 62 50 TTACTGTTCAATAGGTAACATCAAAAACC 61 31 129 none hypothetical protein Other 5.I Unknown [1066] none YPO2453 TTGAGCTGGATATTGATATCCGTG 62 42 TTACTTGCAACGATAATCGTGATC 60 38 363 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2454 GTGAGTGGTGCGGTAGCCA 63 63 CTAATGGATGGCACGCAGG 63 58 162 none hypothetical protein Other 5.I Unknown [1066] none YPO2455 GTGGACCGCAGTCCTTCTCTTTTTACG 69 52 CTACTGACCAAGACCAAATACAAATAGATAGCCCC 69 43 678 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2456 AGTATTTAACGTAAACTTTGACAGAATGTCAGAGA 65 31 CTATTTAGTCATACTGGGCACAACAAGCGG 69 47 645 ypeI N-acylhomoserine lactone synthase YpeI Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO2457 AAAAATTATATCCAACGGAGGATAAAAGCCTATGG 69 34 CTAAATAGGTTTGATCAATTGTAACTCAATGCCAA 68 31 738 ypeR quorum-sensing transcriptional activator YpeR Broad regulatory functions 2 Broad regulatory functions [235] none YPO2458 ATGAGAAAACTCCCATCACTCCGTATGTTG 69 43 CTAAAGCACAGCCGGTAGAGGTTTGGC 70 56 927 none putative LysR-family transcriptional regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO2459 AAAAATCAGGATGGACGATGTCCCC 68 48 CAGTTTGGAATAATGCTGGACGGTGGGC 74 54 1359 none putative transporter protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2460 ATGCAAATGTATATTGGCGAAGGTTTTGC 69 38 TCAGGCTTTGGGGGTAAAGAAGGG 69 54 504 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2461 ATGGATTACATTAAGTTGGGCCATTGCG 70 43 TTATGGGGCAAAAATACCGCTTGGC 70 48 1020 none putative oxidoreductase Other 5.I Unknown [1066] none YPO2462 ATGGATCATTATCTTGATATACGTGTGCTTCCTGA 70 37 TCAAAACCAAGGGATCGTGGCG 70 55 555 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2463 ATGGCTAAAGCAACGATTAAAACCGCTTCT 70 40 TTATTCGCCTTTCTCACCAAAGACACCA 69 43 1005 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2464 ATGAGCTCACTGATTGTTTTACATCAGGTGC 69 42 TCTTCATCATTTAATAGATAGGTATCAACCGATGC 67 34 951 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2465 GTCGGACGAAGGATTAGCGGCGTTTATTG 73 52 TTGTTCAAATTCACGTAGCCGCTGCTTAAATAAGC 73 40 1347 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2466 ATGTGTATTTCTTTTTTTAAATTTGCATTG 62 20 TCAGAACAACCCCTTATTGAAAGT 60 38 255 none hypothetical protein Other 5.I Unknown [1066] none YPO2467 TAAAGGTGATCGGACATGGCAGACG 70 52 TCCCCACTCGGCGAGTGATAAAATC 69 52 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2468 ATGGAAAACGCTATTCATTCCTCTGATTTGAA 69 34 TCATCGCGGAACCTGGCTACATAAC 68 52 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2469 ATGTTAAATCGTCGCCTAAATTTG 61 33 GGGGACTGGCGAACAATGT 63 58 330 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2470 ATGCAACAAAGAATAAGCCAGTGGCTGG 71 46 GCAAGCATACTGCGCATATCGTTACCG 71 52 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2471 ATGAAACTACTAAATACCCTGGTTTGTATCATTGG 66 34 GTTTGATATTCCGCTTTTCAAGTGCCGATTCC 73 44 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2472 AAAAATATTTACCCCTGTTTCTGATGGCAGGTATC 70 37 AAAAATATAATTAATTCCTAACTTGCCAAAATGCG 67 26 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2473 ATGATGAGACATGCCCCACCAGC 69 57 TTAAAATCCGCTAAAAGGATCTTCAATATCAATCC 68 31 255 none hypothetical protein Other 5.I Unknown [1066] none YPO2474 ATGATGAGGTATTCCGGCAATCCGTTAAT 69 41 TTACACCGACAGGTGCTGCCACA 70 57 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2475 ATGAAAAAAAACATCAACAGTTTAATTATCC 62 23 CTACTTTAATGATAGGGACATGCCC 61 44 825 none "sugar ABC transporter, permease protein" Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2476 TTTTTAAAGCTTAAAGATAAACAGGTAGGCAGCGT 68 34 TTAAACAATCTCTACCTTTCTTTCCAGCAATTTTC 68 31 876 none sugar ABC transporter; permease protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2477 AAAAATGAAGAATACCCTGATTTCATTGGCAATT 69 29 TTAGGGCTTTAAAATCGCGTTCACTTCTTTTATT 69 32 255 none putative solute-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2478 AAAAAGAGAAACGCTTAAAACCATCGCTGAA 70 35 TTATGCTGAATCACGGACGACAAGTTCA 70 43 255 none LacI-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2479 ATGGAAAAATTAACCTGTTTTAAAGCTTACGA 65 28 CAGTTGAGTTAATTGCGCTGTTTTCTGCTCCAG 73 45 255 manB rfbK rfbK2 phosphomannomutase Central intermediary metabolism 1.C Central intermediary metabolism [63] Fructose and mannose metabolism none EC:5.4.2.8 YPO2480 ATGGCTAGCGTTTCTCTCGCAAATGTC 69 48 CTATGACTCGCCGTGTATTGCCTGACC 71 56 255 mtlK putative mannitol transport ATP-binding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2481 AAAAAGCACTTAAGGGGATATTTAGTGTCGCG 70 41 TTATCTATCAAACGTTATTGATAACAAGGAGGCTT 66 31 531 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2482 TTGCCGCCGCTGAGGAGTACA 70 62 AGTTATAATGTTCAGGAACTTGATAGTCTTCAGGG 66 37 453 none hypothetical protein Other 5.I Unknown [1066] none YPO2483 ATGAATAAAACAACAGTGAAAGCAGA 60 31 TTAACTATAAATATATAAATCAATAGAACTTTCAG 56 17 405 none hypothetical protein Other 5.I Unknown [1066] none YPO2484 ATGCTTAAAGGTTGGCTCTGC 61 48 CTAATGAGCATCCACACCATTATTT 60 36 168 none hypothetical protein Other 5.I Unknown [1066] none YPO2485 ATGATCTTGAAAAAAGGCATCG 60 36 TTAATACCATTTTACATTAAAATCAGCTAATTG 61 21 198 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2486 GTGGAGGTGGGCCGCGACCT 73 75 TTTACACCAAAGTGTACATGTGGAACCCC 69 45 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2487 TTGTATTCATCTATCTTGGCAAAAATC 61 30 TCAGATTAAGTTTGAGCTACTACAAGGC 62 39 339 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2488 ATGTGGGTGGTGCTGGATC 62 58 CTAAGCCTGATTGCCCTTCA 60 50 252 none hypothetical protein Other 5.I Unknown [1066] none YPO2489 ATGAATTTATTTGTAGTCACATTAAATTGTCATGG 65 26 AAATTTAATCGATTCTTGATCTAAATAAGTTTGCC 65 26 510 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2490 TTCTGGTCAATCGATTTCCAGCGTG 70 48 CCATTTTTCCCGGGTACAACTGCTG 69 52 255 none putative hemolysin Cell processes 4.I Pathogenicity [38] none YPO2491 TTGCGTTATTGTTATTTTATATTACACACGGCT 66 30 TTAGTATTGCCAGTTCAGGTTAAAGCCCACG 71 45 255 none putative hemolysin activator protein Cell processes 4.I Pathogenicity [38] none YPO2492 ATGGCGTCTCATCAGATGTTTGACGTT 69 44 TTATAAATCTAGCACTAACCGCGCCCCTTT 69 43 255 none putative dioxygenase beta subunit Other 5.I Unknown [1066] none YPO2493 ATGAGTAATCAACATCCTGACTTTGTTTTGCCA 70 36 CTACTCTTGAAAGACCTTCGCCACCAGATT 69 47 255 none putative dioxygenase alpha subunit Other 5.I Unknown [1066] none YPO2494 GATATACCGCTGATTGTCACCAGTTTGCTCTGCAT 75 46 TTCCACGACTAAAGTTTCCACGACTAACATTGACG 73 43 255 none putative BCCT-family transporter Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2495 TTGAACGGTGAGGATAGGCA 62 50 TTAAAACGGACGCATACCCA 61 45 183 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2496 ATGAGACTTGCGATGAAGAAAACCTACCG 69 45 TTAGTGAGATAAGACCTGCACAATGGCAGAA 69 42 255 none tartrate dehydrogenase Degradation 1.A.1 Carbon compounds [66] Glyoxylate and dicarboxylate metabolism none EC:1.1.1.93 YPO2497 ATGAATAATCTGCCGATACTCAGTGACCTGC 70 45 TCAGCGCTTCAGCGTTCCGC 71 65 255 none putativeLlysR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2498 GTGTCGAAAGCTTATTCAAATGCCACGAT 70 41 TTAGTGGGTGAGCAGAGATCCGGTG 69 56 255 none putative LacI-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2499 ATGATCAGAACTGAACACTCTTCTTCTACGCAAG 69 41 TTATTTGCGCCGAACGGAACTGAG 69 50 255 rbsC putative sugar transport system; permeaseprotein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2500 ATGACGCCTTTATTAGAGTTAAAGCAGATAAAAA 65 29 CACTCCCTGTTGCGTGAAGCATGATGTTATTAGAT 73 43 255 rbsA putative sugar transport system; ATP-bindingprotein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2501 AAAAAGCCCTGTCATTTAGCATTGCAGG 70 43 TTACCAGCTAAAACCTTGCGCATTGCTAC 69 45 255 rbsB sugar binding protein precursor Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2502 ATGAGTCAGTTACCTGAGAAAATGAGCGCTG 70 45 TTAAGGAACCAGAATGACCTTAATAGAATTCGTGG 69 37 255 gutB putative zinc-binding dehydrogenase Other 5.I Unknown [1066] Fructose and mannose metabolism none EC:1.1.1.14 YPO2503 ATGTTGTCAGGTATTCAATCGGC 62 43 TCATTTCCCTCCCATTAGACAC 60 45 669 none hypothetical protein Other 5.I Unknown [1066] none YPO2504 ATGCCAGGTCGTATTCAAGAAATGCCTC 70 46 TCATGACTGTTTAGGTACGTCACCATTTTTATTT 67 32 543 none hypothetical protein Other 5.I Unknown [1066] none YPO2505 ATGACAACACTCAGTGAGCAAGCTCCTC 68 50 CTATAACCACTTGGCATCACGCGTAAAGG 70 48 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2506 AAAAATTGCATGTCTTTCAGCGGTAGCAG 70 41 TTAGAAAGTGTAACCTACGCCAGCAACCC 69 48 525 ompX omp4 putative outer membrane protein Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO2507 ATGTCGTTGTCTCCTTCTTCTAAAAACTCACTGC 70 41 TCAGGTGACCTGGTCAAGTTGTGGTTTAG 69 48 888 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2508 ATGGAAATCAGAACCGCAACGCC 70 52 TTAGGACTGAGTTGGCACCAGCACC 69 56 498 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2509 ATGCAAGATTGGGATCCTGATTTATATCGTCA 70 37 TTATCTTTGAGCATGGGCGACAATAAATAAACG 71 36 777 tam puative trans-aconitate methyltransferase Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO2510 ATGAGTACAGCAAAACTGGTAAAAACAAAACCCTC 69 37 TCACTCAATATTTGACTCGATAAACCACAAGAATT 68 31 504 dps putative DNA-binding protein Other 5.F Adaptions and atypical conditions [36] none YPO2511 TGAAGAAAAATTGTTTAAAACATTATCGTGCTGGG 70 31 CGCTCCTCAAGTGGGTAACTACGGAAACTCCATAA 74 49 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2512 ATGAAGTCACTTGTCAAAGTTTCATTGGCC 69 40 TTACTTAGGTTCTACGCCGAACCATTTTT 66 38 744 glnH putative glutamine-binding periplasmic protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2513 ATGCAGTTTGAATGGAGCGCTATTTGG 70 44 TCATATTATTTTCAGTTTTCTTTCTAACCGACGGA 68 31 657 glnP putative glutamine transport system permease Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2514 ATGGAGCGCGGTGGCGG 71 76 TCAGGAAACGTGTTGCAGGAATTCC 69 48 810 glnQ putative glutamine transport ATP-bindingprotein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2515 GTGGATCACTATTGCACCGTTC 62 50 TCACTGATTTTTTACCTGAGAAAAAGTG 62 32 none putative chemotactic transducer Cell processes 4.D Chemotaxis and mobility [86] none YPO2519 ATGCTATCTTACGCGCCAGAAAATGCCTAT 70 43 TTATGCCCAGCGCTCTGCAACC 70 59 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2521 ATGAAAAACATCAAAAATTTCGTTGCAGTTATCG 70 29 TATTTATAAATAACCGCACTACCGTGCATCAGGT 69 38 261 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2522 ATGGATTACAGTAAAATTATCAAAGAGGTTGGGCG 70 37 TTACACAATCTTAATTTGTTGCAACGCCAGTT 69 34 255 ybiB putative glycosyl transferase Other 5.I Unknown [1066] none YPO2523 ATGGCATCGTTAGGCCATCCGC 71 59 CTATCTTTCGCCAATCTTCTCCCCTTCATACT 69 44 255 menE putative O-succinylbenzoic acid--CoA ligase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] Ubiquinone biosynthesis none EC:6.2.1.26 YPO2524 ATGCGCACGGCTACCCTTTACCG 71 61 CTAACGATGCCATACCACGCCCA 69 57 255 menC putative O-succinylbenzoate-CoA synthase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] Ubiquinone biosynthesis none EC:4.2.1.- YPO2525 ATGCTTTATCCGAGCGAAGAACAATTGTACG 71 42 TTACGGATTACGCTTGAATTTGCTGAAGTC 69 40 858 menB naphthoate synthase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] Ubiquinone biosynthesis none EC:4.1.3.36 YPO2526 ATGACGACACTGGCTTGCCGAAA 70 52 TTAACGAGATAATGATGACGGTGGTAAGCATG 70 41 819 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2527 ATGTCGACAAGTGTTTTTAACCGTCGTTG 69 41 CCACCTGCGGTATTAATGTCACCTGTTGTACTAA 71 44 255 menD menaquinone biosynthesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] Ubiquinone biosynthesis none EC:4.1.1.71 4.1.3.- YPO2528 GAAACAACTTTCTGGTTTGCTGGGTGAATTACGAC 73 43 TTAGGCTTTAACGGGCTGCGCTTC 69 54 255 menF menaquinone-specific isochorismate synthase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] none YPO2530 ATGAGTAATACTTTGGATCTATCAGCCGCTGC 69 44 TTAAGCAGGTACGACATTCCATTGCTGTG 70 45 645 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2531 ATGAACCGAGATAATGAACCACCAACCTC 69 45 TTAGCGACGAGCCACCAATAGCCC 70 58 309 elaB putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2532 ATGAGTTTCAAGTCAATAAATAAAAACGC 62 28 TTAACATCTCCTGAAACGGTTATTAGC 62 37 213 none hypothetical protein Other 5.I Unknown [1066] none YPO2533 ATTATCACCCGTGTCACGCAGCGTATCATTG 74 48 ACCAGAAAGCTGTTCACGTAATGCCCCAAA 73 47 255 edd phosphogluconate dehydratase Energy Metabolism 1.B.6 Entner-Doudoroff pathway [2] Pentose phosphate pathway none EC:4.2.1.12 YPO2534 ATGAATTTACAGCAACAACTCGCCTACTGC 69 43 TTATGCGCTCAATGGGGTTAATGGG 70 48 516 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2535 ATGGACAGTAAGATCCCTAATGCCCGTTG 70 48 TTACGCACGTTTCGCTTTAGTCAAACC 68 44 255 none putative sugar transporter Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2536 ATGAAACACAGCAAACAAGCCGTATTGATAATC 70 36 TTAATAGGTAATTGCTGTAGGTGCCGTTTCG 69 42 255 none putative D-isomer specific 2-hydroxyaciddehydrogenase family protein Other 5.I Unknown [1066] "Glycine, serine and threonine metabolism. Glyoxylate and dicarboxylate metabolism" none EC:1.1.1.81 YPO2537 ATGAAAAACCAGCGAGTTACGTTAC 62 40 TCAGATAGTCCCACCGAGAGAG 61 55 none putative LacI-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2538 ATGTTGTTACATCTGAAAGGAAGCCACCG 70 45 TCAGTTACGCCACCTGGACTTCAAATATTTTAC 69 39 255 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2539 ATGGATGTATTTACGGCGTCTTTACGATCTG 69 42 TTAAACGGCTACCAGCATGCCACC 69 54 870 idnO gluconate 5-dehydrogenase Degradation 1.A.1 Carbon compounds [66] none YPO2540 ATGTCTGGTAAATGCATTATTGTCATGGGTGT 69 37 CTATTCACTAAGAATCGCGCTCACGTGG 70 50 537 idnK gntV putative thermosensitive gluconokinase Degradation 1.A.1 Carbon compounds [66] Pentose phosphate pathway none EC:2.7.1.12 YPO2541 AAAAAGCGGTGAATAACCCCATCTATCCA 69 41 TCATAAAAGATGATTAGCCACCTTCACCACTAGC 70 41 468 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2542 ATGTGGGTTTTACCTATAAATTCTAATCCGACTGT 67 34 TCATACTGTTCGGGGCAGATACGTACCAT 70 48 255 none hypothetical protein Other 5.I Unknown [1066] none YPO2543 ATGCTACCGCTGTTGATCGTCGGAT 70 52 CTGAGCCATCTGCACCAGTGTTATCAACGG 74 53 255 nuoN NADH dehydrogenase I chain N Energy Metabolism Respiration 1.B.7.a Aerobic [20] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO2544 TACCTTGGCTAATTCTTATCCCCTTTATCGGCGGT 74 46 GGCCTTGTAATAGATGGAGCTGGAATAGATGCAGC 74 49 255 nuoM NADH dehydrogenase I chain M Energy Metabolism Respiration 1.B.7.a Aerobic [20] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO2545 GGGCTTCTTGCTGTTGGCATTCTCC 71 56 ACCCAAACCTATAGAGGCGGCGTACCAAC 72 55 255 nuoL NADH dehydrogenase I chain L Energy Metabolism Respiration 1.B.7.a Aerobic [20] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO2546 ATGATCCCTCTACAACATGGCCTGATTCT 69 45 TCATCCGCGCATCTCACTGACTGTAT 69 50 303 nuoK NADH dehydrogenase i chain k Energy Metabolism Respiration 1.B.7.a Aerobic [20] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO2547 ATGGAATTTGCGTTTTATATTGCAGCATTG 69 33 TCATGCTTGTTCCTCCGTTTTTCTTTTC 68 39 546 nuoJ NADH dehydrogenase I chain J Energy Metabolism Respiration 1.B.7.a Aerobic [20] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO2548 ATGACGTTGAAAGAGTTAGTGGTTGGTTTCG 69 42 CTAGGGCATCAGACCTTTAACGTCGATCG 71 52 543 nuoI NADH Dehydrogenase I chain I Energy Metabolism Respiration 1.B.7.a Aerobic [20] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO2549 ATGAGCTGGTTTACGCCTGAATTGATTG 69 43 TTATTGAGCGTTGTACAAAATGACCGCG 70 43 255 nuoH NADH dehydrogenase I chain H Energy Metabolism Respiration 1.B.7.a Aerobic [20] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO2550 TACCGACAAAACCCATTCCGAACGT 69 48 CTGACCCGCACAGTTGAACTCAACC 70 56 255 nuoG NADH dehydrogenase I chain G Energy Metabolism Respiration 1.B.7.a Aerobic [20] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO2551 ATGACCATCAATTCAGGAACGACCAAG 68 44 CTACCAGCGCGCTTTTAATAGATTAGGTTGAA 69 41 255 nuoF NADH dehydrogenase I chain F Energy Metabolism Respiration 1.B.7.a Aerobic [20] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO2552 ATGAGTGATCAAAAAGAGACTCAGGCTCATAACG 70 41 TCATGGATATTGCTCCAGTAACTTCTCGATCTC 70 42 564 nuoE NADH dehydrogenase I chain E Energy Metabolism Respiration 1.B.7.a Aerobic [20] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO2553 CATGGCAAACCCGTGATCATCTTGATGA 73 46 CGATCAGGTCAGATACCAAACTGCCACGGATA 74 50 255 nuoD NADH dehydrogenase I chain C/D Energy Metabolism Respiration 1.B.7.a Aerobic [20] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO2554 ATGGACTATACGCTCACCCGCATAGACC 70 54 TTAAATCTCGTCAGGTGTGCGCAGG 70 52 678 nuoB NADH dehydrogenase I chain B Energy Metabolism Respiration 1.B.7.a Aerobic [20] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO2555 ATGCGTATGTCAACAACCACTGAAATTATCG 69 39 TTATCGGGATTCGTTCGCTTGCTG 69 50 501 nuoA NADH dehydrogenase I chain A Energy Metabolism Respiration 1.B.7.a Aerobic [20] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO2556 ATGACAAATGCAAATCGTCCGATAATTAATCTC 69 33 TTAATCTTCATCACCTGTCAAATAATCGGAATCC 69 35 255 pecT hexA LysR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2557 GTGGGACAGATCCATCTGTGTT 61 50 CTATTTACAGGATTTTCCCATCCTAAC 61 37 273 none hypothetical protein Other 5.I Unknown [1066] none YPO2558 ATGTCCCCCATTGAGAAATCCAGCA 70 48 TTACTGATGATACGTCTCTAAGAACCGCCCC 70 48 255 aat probable aminotransferase Other 5.I Unknown [1066] "Glutamate metabolism. Alanine and aspartate metabolism. Cysteine metabolism. Arginine and proline metabolism. Tyrosine metabolism. Phenylalanine metabolism. Phenylalanine, tyrosine and tryptophan biosynthesis. Carbon fixation. Alkaloid biosynthesis I" none EC:2.6.1.1 YPO2559 ATGAGTCACTTCTTCGCTCATCTTTCCC 68 46 TCAATCCAGTGAATCGAGGCTGATTTC 69 44 594 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2560 TTGCCGGTGTGTTGGCTGT 66 58 TTAGCATTTATTTCTGGTAATATTTTCTCTC 60 26 270 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2561 CGAACTACTGTGGGTGTTGACGCTACTGCTGATA 74 50 CACCCCCATACGGACGAAATCACCGAATTTATA 74 45 255 none putative ion transport protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2562 GTGCTTGTGGAGTGTAAAGGTTTTCTTTTTGATTT 70 34 TTAAGGCAGTAACCGAACCACCGCA 70 52 663 none putative haloacid dehalogenase-like hydrolase Other 5.I Unknown [1066] Aminosugars metabolism. Thiamine metabolism. Riboflavin metabolism. Vitamin B6 metabolism. Nicotinate and nicotinamide metabolism none EC:3.1.3.- YPO2563 ATGGATATGACAAACGCCCAACGACT 69 46 TCAGGCATTAATAATTTGCGAAATTTCGACG 71 35 495 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2564 ATGACAATTAAACCCTCTGATTCGGTAAGCTG 69 41 TTACAAATCATCGAGAAACGTTTTGTCTAACTGTT 68 31 456 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2565 ATGCTTTTTTGCTATCGCATG 60 38 TTACTCGACATGGAAGTACCTATGTATAGT 60 37 192 none hypothetical protein Other 5.I Unknown [1066] none YPO2566 ATGTCGAGTAAGCTAGTACTGGTTCTTAACTGCGG 70 46 TTACGCAGTCAGACGGGCTGC 68 62 255 ackA ack acetate kinase Degradation 1.A.1 Carbon compounds [66] Pyruvate metabolism. Propanoate metabolism none EC:2.7.2.1 YPO2567 TCCTGACCAAACCACGACCATCATC 70 52 GCTGAATCAGCCTGAGCTGATTGGA 69 52 255 pta phosphate acetyltransferase Degradation 1.A.1 Carbon compounds [66] Pyruvate metabolism none EC:2.3.1.8 YPO2568 AAAAATACGCAAGCGCCGTAATACCG 69 46 TTAGGTACTTTGCCGTGGTTCAAATTTATAGTTAA 67 31 255 none LacI-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2569 ATGTTAAAAACACTGTTAACGTCGGATGTCATTC 69 35 TTAATAGCGTGCAATCACTGACAGAATATCCTG 69 39 444 none phosphotransferase enzyme II; A component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2570 ATGAAAATTACAGTGGTCTGTGGTAACGGTTTAGG 70 40 TTATGGACAGGCTCTGGCTTTCTTATCGA 69 45 255 none phosphotransferase enzyme II; B component(pseudogene) Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2572 ATGCGCATCCCAACCTTAATG 64 48 TCAAAAACAGGCAATTACACAATATTG 62 30 pbpC bifunctional penicillin-binding protein 1C (pseudogene) Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO2573 CCCAGTTGATGTTGCCAGCTTTGAA 70 48 GGTCGTTTGCTCTTCCAGTTCGGTC 69 56 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2574 TTGGCTATGTCTGAAAAAAGAGTGA 61 36 TTAATTTGCCCATATCCCTTTAATG 61 32 555 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2576 ATGACTACAGCAAGCAATCTGAGTGAACTACAGC 70 44 TCACTGTCTGTGCGCCAGCG 69 65 855 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2577 ATGGAGACGGTAGCGAATTTTATTAATGGCA 70 39 TCAACCGAGTGTCGGCATAGAGAATG 69 50 255 none putative aldehyde dehydrogenase Other 5.I Unknown [1066] "Inositol metabolism. Valine, leucine and isoleucine degradation. Propanoate metabolism" none EC:1.2.1.27 YPO2578 CTGGTCAGGTTTCTTAATCAGCAATATGTGGCCAT 73 43 ACGTTTTACCTTCATCTGGGTTCGCTCTGCAG 74 50 255 none putative thiamine pyrophosphate-dependentprotein Degradation 1.A.1 Carbon compounds [66] none YPO2579 ATGTTTAACATTGCCTTACTGGGCGCA 70 44 TCATATCACGGAACATACCGCCGG 70 54 510 none putative myo-inositol dehydrogenase(pseudogene) Degradation 1.A.1 Carbon compounds [66] none YPO2581 ATGAAAAAGCTGATCCTCGCCGC 69 52 TTACTTACCCGCTTCGCTAACGCG 68 54 255 none putative sugar-binding periplasmic protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2582 CGAAAAGCTTCTCTGGTGTCTGGGCG 73 58 CGGCATTTAAGGCGTTATGATTGATGGTCATCAT 74 41 255 none sugar transport ATP-binding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2583 ATGCTACAGCCGCTTTCCAAGCC 69 57 TTACAGCGCGCCGCGAC 68 71 255 none sugar transport system permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2584 ATGATGAAAGAAGTGCGTATTGGATTGATTG 69 35 TCAGACAATGTCGGTCACATTCACCC 70 50 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2585 AAAAGCAATTTAGCGTTAGCGCGGAAAAGACATG 74 41 CTGTAGATAGTTGTCCCGAATGCGGGCAATAA 73 47 255 none putative carbohydrate kinase Other 5.I Unknown [1066] none YPO2586 ATGACGATGGTGGATCAAAGAACGG 69 48 TTAAATCAGCCCAGCGTTATGTGCCA 70 46 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2587 ATGTCACGTTTATTATCACGCAGGCAGG 70 46 AATAGGATAATTATGATTTATCCAAACATGATCGT 65 26 816 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2588 CCGCATACTCAAATTTTTGCTTCCTTATTTATGG 70 35 TTCTTCATGATACTGATTTTGCCACATACCCGCAT 74 40 255 none putative ABC transport protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2589 ATGCTAAAAGTTATTGCTCAGGATTTT 61 30 TTATTCCAGTGGCCTCATAAGG 60 45 288 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2590 ATGTCAACATTAGAGAAGCTGGTTTC 61 38 CTACAACGGCCTGTAAATATCCC 61 48 195 none hypothetical protein Other 5.I Unknown [1066] none YPO2591 ATGAAAACCAGCCATCGGG 63 53 CTACACTGATATTAAATAAGCCACCTGC 62 39 183 none hypothetical protein Other 5.I Unknown [1066] none YPO2592 ATGAGAAACGTCGGTTTACATGC 62 43 TCAGAATGAGATAAAGCGCGA 61 43 966 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2593 AGTCGATAACGATAAATATCAAACATTAGGTATGG 65 31 AAACATAAACATTTTTATTAACTCGACATCAGTCC 65 29 591 none putative LuxR-family regulatory proteins Broad regulatory functions 2 Broad regulatory functions [235] none YPO2594 ATGATCAAAAAGGGTGCTGAAGTAACCTTTGA 70 37 ACTCTTTAATTTAGCAACCGTACTATCAATATCGA 65 31 372 none hypothetical protein Other 5.I Unknown [1066] none YPO2595 ATGTCTAAGATTAAAGGTAGCGTTAAGTGGTTCAA 66 34 TTAGATAGCGATAACATTAGCAGCAGATGGCC 70 44 210 cspE putative cold shock protein Other 5.F Adaptions and atypical conditions [36] none YPO2596 ATGTTTAATACATTACTTGCAGTGTTTATTGGTGG 66 31 TTATTGGCTGGCAAAGTTATTGACCAATATAAAAG 68 31 384 crcB putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2597 ATGGAAGGTCTCAGTATTACCAAACTGTTGGTTG 70 41 TCAGTCTTTGCGCTCAACCGAAGC 70 54 258 tatE sec-independent protein translocase protein Cell processes Transport/binding proteins 4.A.6 Other [104] Protein export none EC:1.2.1.27 YPO2598 ATGAGTAAACCGATTCAGATGGAACGCG 71 46 TTACTTCACTTCCATACCTTTCGCTTGCAG 69 43 255 lipA lip lipoic acid synthetase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.3 Lipoate [2] none YPO2599 ATGATGCCTCGCTTGCAACAACAC 69 50 TTACAACACGCTTGATGATGAATGGCTTG 70 41 702 lipB lipoate-protein ligase B Biosynthesis of cofactors; prosthetic groups and carriers 1.G.3 Lipoate [2] Lysine degradation. Folate biosynthesis none EC:6.-.-.- YPO2600 ATGAAAACGAAACTGAACGAACTACTTGAGTTCC 69 38 CTAGAGCACCATCTTGACCAATTCAAGATTGC 71 44 264 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2601 ATGAAATATGTAATTACCTCTCGCATTATCAAGAG 65 31 TTAGCCAAACCAGCGGTGGAACA 69 52 255 dacA putative penicillin-binding protein 5 Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO2602 ATGCGTAAGGAATGGCTTTGGGTCG 71 52 TTAGGGCGCTGCCACGATAAAGG 69 57 255 rlpA rare lipoprotein A precursor Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2603 ATGACTGATAATCAACAAAAAGGCTCGTTGTG 69 37 TTCTTAGATAACATTTTTCGATGAGTATGTATCGA 65 29 255 rodA mrdB rod shape-determining protein Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO2604 CCAATAGTGGATCTGACTGACGAC 62 50 AACGGATACCGTAGGGTTCTCATA 62 46 ~1400 "pbpA, mrdA" penicillin-binding protein 2 Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO2605 GTGAAACTGCAACTGGTAGCCGTCG 69 56 TTATTCCCGGTGATAAGGATGATTGGTCGTAATA 71 38 471 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2606 TTGCAAGGTAAAGCGCTCCAAGAATTT 69 41 TTAGCTCCAGAGTTTTTCCAGTTCGTACATACG 69 42 318 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2607 ATGCCCATTAAATCCTCGGATCATTCTCT 69 41 TCAGCCGCGATATAAACCTTGTAACTCAATATATC 68 37 663 nadD putative nicotinate-nucleotideadenylyltransferase Other 5.I Unknown [1066] Nicotinate and nicotinamide metabolism none EC:2.7.7.18 YPO2608 ATGATCCGGATTTACCCTGAACAACTTGTC 69 43 AAAAAGCTCTCAGGTAATGTTTTTCCACACATCA 70 35 255 holA DNA polymerase III; delta subunit Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] DNA polymerase none EC:2.7.7.7 YPO2609 GTGCGACATCGTATTCTGACGTTGTTG 69 48 TCATTTGGCTGAGGTACTGACGGCA 70 52 624 rlpB rare lipoprotein B precursor Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2610 TTACTGGGCTTCGGCTATGACTGGG 69 56 CTCCACCCAAAGCTTGCCACAAACT 70 52 255 leuS leucyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] "Valine, leucine and isoleucine biosynthesis. Aminoacyl-tRNA biosynthesis" none EC:6.1.1.4 YPO2611 ATGAACAAGATAGCTCAGTACTACCGTGAGTTAGT 66 40 TCATGGCTGGAATGGGCGG 69 63 483 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2612 ATGATTTCCCTGAAGAATGTTTCTAAATGGTATGG 69 34 TTAATGCAAGATTTTAGCCAGGAAGTCCTTGG 70 41 726 gltL putative glutamate/aspartate transportATP-binding protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2613 ATGTACGAATTTGATTGGAGTTCCATCGC 69 41 TCAAACAGTCCTTTTCTTCAAATAGTTAACCAGCA 69 34 675 gltK putative glutamate/aspartate transport systempermease Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2614 ATGGCAATAGACTGGAACTGGGGCAT 70 50 TTATTTACTCCCCAGATTGCCGGGTAATTG 70 43 741 gltJ putative glutamate/aspartate transport systempermease Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2615 ATGCAAATGCGTAAATTGGCGTTAGTG 69 41 TTAGTTCAACGCCTTATCGTTAGGTGCTTTG 69 42 255 glnH putative amino acid-binding protein precursor Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2616 ATGATGCTCCGCAACCTAAACTGGAAG 69 48 CAGTACAGGGTAAAGGCGCCCAAAACCA 73 54 255 cutE lnt putative apolipoprotein N-acyltransferase Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] "Valine, leucine and isoleucine degradation. Lysine biosynthesis. Lysine degradation. Histidine metabolism. Tyrosine metabolism. Phenylalanine metabolism. D-Arginine and D-ornithine metabolism. Aminosugars metabolism. Lipopolysaccharide biosynthesis. Glycerolipid metabolism. Benzoate degradation. Ethylbenzene degradation. Butanoate metabolism" none EC:2.3.1.- YPO2617 ATGAGCGACGACCATTCACAAA 65 45 TTATTCTTCCAGTTTAGGTTGCGG 63 42 ybeX putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2618 GTGAGCCAGGTTATTCTCGATTTACAAATTGC 69 41 TTAGTCGGGGTCTTTCTCTGAAATATACGGGT 69 44 474 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2619 GTGACCCAGAAAAACAGTTTGCACGTAGTG 70 47 TCACGGAGCCTCCTGCTCTAGCG 71 65 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2620 ATGACTACAATGCTCCCTAACGACGAAGCC 71 50 ACCTACACCAATTTCATTTTCTTTACGGGTGCGAG 74 43 255 miaB putative tRNA-thiotransferase Other 5.I Unknown [1066] none YPO2621 ATGAACAAATCGCAACCAAATTATGATGTTGT 69 31 CTACAACCCCAACGCATACCTCAATGC 70 52 255 ubiF putative2-octaprenyl-3-methyl-6-methoxy-1;4-benzoquinolhydroxylase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] Ubiquinone biosynthesis none EC:1.14.13.- YPO2622 TTGCTATCTATTCTCTATTATCCCGTCT 60 36 TTAAATGAAGGAGGCACGTGC 62 48 138 none hypothetical protein Other 5.I Unknown [1066] none YPO2623 GAGCTTAAAACCGACCCTATTGAATTACGCAAGAA 72 40 CCAACCGCACGGCCTGATGGAT 74 64 255 asnB asparagine synthetase B Amino acid biosynthesis 1.D.2 Aspartate family [24] Alanine and aspartate metabolism. Nitrogen metabolism none EC:6.3.5.4 YPO2624 ATGACAATCAAAAGCGTTATTTGCGATATCG 70 35 TTAGATAATATCGATGTCGGCAACCGAGG 69 45 753 nagD putative N-acetylglucosamine metabolism protein Central intermediary metabolism 1.C.4 Amino sugars [5] none YPO2625 ATGGCAACGAGGTTTTATCATAAGCGAGTAACT 69 39 CTACGGGTGAGTTTCTAGCAAACGTTGC 69 50 255 nagC nagR putative N-acetylglucosamine regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2626 ATGTACGCTTTAACTCACGGCCGTATTTATACCA 71 41 TTATGATAAAACCTCGTTGCCATTAACGATGG 70 37 255 nagA putative N-acetylglucosamine-6-phosphatedeacetylase Central intermediary metabolism 1.C.4 Amino sugars [5] Aminosugars metabolism none EC:3.5.1.25 YPO2627 ATGAGACTTATCCCACTGAGAAATACTGCCGA 70 44 TTAAAGATCTTTTACGTTTTCAGCTTCTAATTCGC 67 31 801 nagB glmD putative glucosamine-6-phosphate isomerase Central intermediary metabolism 1.C.4 Amino sugars [5] Aminosugars metabolism none EC:3.5.99.6 YPO2628 AAGTAGGTCGAGCGTTGATGGTCCC 69 56 TCTCAAATAATTGGCTTTGACCGGCA 69 42 255 nagE pstN pts system; N-acetylglucosamine-specific IIABCcomponent Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] Aminosugars metabolism none EC:2.7.1.69 YPO2630 ATGAGTGAGGCAGAAGCCCGCC 71 64 ACGCATCTTTTCAAACAGCGCCA 69 48 486 glnS glutaminyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Glutamate metabolism. Aminoacyl-tRNA biosynthesis none EC:6.1.1.18 YPO2631 GCACTGTCAGATTGCTGCACACAAGGCTA 73 52 TCAGAAGAGAGTAAATGGTGCAATTACGATAAATT 67 31 255 ybfM putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2632 ACAAATTTAAGTTAAATGCGTTGGCGGC 69 39 TTAGCCGCAGAGAGTGTTTTCACTGCC 71 52 624 chb N-acetylglucosaminidase (pseudogene) Central intermediary metabolism 1.C.4 Amino sugars [5] Glycoprotein degradation. Aminosugars metabolism. Glycosaminoglycan degradation. Sphingoglycolipid metabolism. Globoside metabolism none EC:3.2.1.52 YPO2634 AAAAACGCTGGCCTTAAAGTCACACTCC 69 46 TTATCTTTTACTGTGTGCAGACTCATCTTCACGG 70 41 447 fur ferric uptake regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO2635 ATGGCAACTGTAGGCATTTTCTTTGGC 69 44 TTAACCGATAATCTCTGACAAGTTCAGCTCTTCAC 69 40 528 fldA flavodoxin 1 Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO2637 ATGGCAAAAGAACAAACGGATCGCA 71 44 TTAGCACCCTTCTTGATCATGCGCTAACT 69 45 288 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2638 ATGAAATTAAATTTCCGCTTACAAAACGCACC 70 34 TTATGCGGCATCAAGGAAACGGTG 70 50 768 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2639 ATGACCCAAACAGAAGTTTATGGTCTTGGTTTC 70 39 CTACTGAACCATTAGCTTGCGTTTATCTATATGTT 65 34 186 none integrase (partial) none YPO2641 TTGGGCCGTTGGTGGAGATATAA 66 48 TTATTCAATGGGGAGCAGGTC 61 48 "intA, slpA, intX" phage family integrase (partial) NULL none YPO2644 ATGTCGATGGAGTCACTTTACGAATATGGAACTC 70 41 CTACCGGCCATTGATACCTTCAAACG 68 50 735 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO2645 ATGCGCACGACAGGAATCTGGG 70 59 TTACTGCGCCGTTTGGGAATTAGCC 71 52 255 proX proU glycine betaine-binding periplasmic protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2646 ATGAGTGATCAAATTCAGGTGAACGAACAAAC 70 37 TTATTTGCTGTTACAGAAGGGTTTGGTGAGC 69 42 255 proW glycine betaine/L-proline transport systempermease Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2647 AAAGAACTTATATAAAGTATTTGGTGAACATCCGG 66 31 TCACTCATTTGGCGTCTCCTTATCTAGGG 69 48 255 proV glycine betaine/L-proline transport ATP-bindingprotein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2648 ATGAACGTAGTAAAACCAATAACACGTATCAGCG 69 38 TTAAAAATCCCAATCTTCGTCTTCAGTATTGACC 69 35 255 nrdF ribonucleoside-diphosphate reductase 2 betachain Central intermediary metabolism 1.C.3 Sugar nucleotides [11] Purine metabolism. Pyrimidine metabolism none EC:1.17.4.1 YPO2649 TTGGCAACGACAAAACTGAACGTCA 69 44 CGTCAGAGAGAGGCCCTGATCAACA 69 56 255 nrdE ribonucleoside-diphosphate reductase 2 alphachain Central intermediary metabolism 1.C.3 Sugar nucleotides [11] Purine metabolism. Pyrimidine metabolism none EC:1.17.4.1 YPO2650 ATGAGCATTGGTCAGGCTTCCACC 69 54 TCAGTTTTGTCGTTGCCAAAATTCAGTTACTC 69 37 483 nrdI NrdI protein homologue Other 5.I Unknown [1066] none YPO2651 ATGAGCATTATTATTTACAGCAAACCTG 62 32 TCAAACACTGACCGCCTGA 61 53 237 nrdH putative glutaredoxin Central intermediary metabolism 1.C.3 Sugar nucleotides [11] none YPO2652 AAAAAGTATTAGCATTAATGGTTGCCGCCAC 69 39 TTATGCTGCGGGTGCCGCTACT 69 59 366 asr putative acid shock protein Other 5.F Adaptions and atypical conditions [36] none YPO2653 ATGTATCTGAGACCTGATGAAGTCGCTAAAGTTTT 68 37 CTATTCGAACATCCGGCCTAAGAAATTCAGTAA 70 39 336 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2654 ATGACGTGGATAATTATTGCTGTTTTGATCGTG 70 36 CTAATGAAGCAGGGTGCCGGGTTC 70 58 450 yicN putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2657 ATGCGTGAGCTTGAAGTACAATT 60 39 CAGTGAATGCTGTTCCGGTAG 61 52 210 none putative mobilization protein (pseudogene) Other 5.C Plasmid related functions[1] none YPO2659 ATGTCTAATAAAATGACTGGTTTGGTAAAATGGTT 66 29 TTACAGTGCTACAACGTTTACAGCTGAAGGG 69 45 213 cspB cold shock protein Other 5.F Adaptions and atypical conditions [36] none YPO2660 GTCTAGACGTCTATGGCTTCGAAACACCTTGGTG 73 50 TCACTGACAGGTCCATTTCCAGCTATCAATACTAT 69 40 255 none putative solute-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2661 ATGGACCTGTCAGTGATGAAGGGGATC 70 52 TCATAATTGCCGCGCAGCCC 70 60 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2662 ATGACTTATAACCCAAACCGGGCCTTGT 70 46 TCAGGCTAACCTCACCCAGAGTTGTTGTAGT 70 48 807 none binding-protein-dependent transport protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2663 ATGCTGAGATTTGACCAATTTGCTATTGATGTC 70 36 CTAAGCATAGTCGGCCACCTCAGCC 69 60 807 none putative transport ATPase Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2664 ATGCTTAGTGTCGAGAATCTGACCATCGTTC 70 45 TTAACCCGTTTTTACCATTGCTAACCCCA 70 41 666 none putative transport ATPase Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2665 ATGCAGCTCACCCCAAGAGAAGTTGA 70 50 CTACTTAATAGGGTCGTGTACCGTGACCAGAC 68 50 303 ureA yeuA urease gamma subunit Cell processes 4.I Pathogenicity [38] Urea cycle and metabolism of amino groups. Purine metabolism.Atrazine degradation none EC:3.5.1.5 YPO2666 ATGAGCGCGAAGAAAAGTACGAAAGACAGT 70 43 TTATTTAGATGATTTAAAACCACGCTCGGCG 70 39 435 ureB yeuB urease beta subunit Cell processes 4.I Pathogenicity [38] Urea cycle and metabolism of amino groups. Purine metabolism.Atrazine degradation none EC:3.5.1.5 YPO2667 GCCCAACAACTGGCGATAAAATCCGTTTG 74 48 CTCACAGGTGGCATGTACCCCATCCACTTTTA 74 50 255 ureC yeuC urease alpha subunit Cell processes 4.I Pathogenicity [38] Urea cycle and metabolism of amino groups. Purine metabolism.Atrazine degradationea cycle and metabolism of amino groups none EC:3.5.1.5 YPO2668 ATGATTTTGATAGAGCACATTCTGGGTAATGTGA 69 35 TCAGTGTTTATGGTCGTGGTCATGATCA 69 43 696 ureE urease accessory protein Cell processes 4.I Pathogenicity [38] none YPO2669 GAACGCATCAGATCTCATTCGTATCATGC 70 45 TCAGTTACTAAAGAGGCGAACATGGGCTTT 69 43 687 ureF urease accessory protein Cell processes 4.I Pathogenicity [38] none YPO2670 GTGACCGATAAAAGCACAGCACGTAAAAA 69 41 TCATGCCTGTTCTCCTTCCGGC 69 59 663 ureG urease accessory protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2671 ATGACAGCACAGAGCCAGAATATCGTGG 70 50 TTAGGTAGACGCGTCGCGCCG 71 67 834 ureD urease accessory protein (pseudogene) Cell processes 4.I Pathogenicity [38] none YPO2672 ATGAATGCTAAAACAGTCAACAAATCAGGTTGG 70 36 CTACTGTCGGTGCTCTGGCATGACA 69 56 255 none putative urea transporter Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2673 ATGACGACAATAATCGCCAGCAGCA 70 48 TTATCGGCTTATATTTAGCTTGTCATAACCACGGA 70 37 255 none putative nickel transport protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2674 ATGTCCTACAAATCACTGCGTAATATTGCACTG 69 39 TTTTTGGCGAAATTTAAAATGTCCTGTTTAA 67 26 330 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2675 ATGAAAACATTACGGGAATTTAGAGCTAAGGTATC 67 34 TCAATCCAGTTTCTGGCAATGACCAAA 70 41 255 none putative potassium channel protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2676 ATGCCGAATCTTATTATCTTAGTCTTTGTCGGTG 69 38 TTATTCAGAGGCAACTTGTGGATCTTTAGGTTTCT 69 37 405 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2677 ATGACTGCAATCGATGTAATGTGGGTGG 71 46 TTAGTAAGCCAGCCAGGCACCGAAG 70 56 381 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2678 AAAAATTTATCTGTTTTGCTCTGCTGGGATGTC 70 36 TTTTTATTGCGGCCACCGCAG 69 52 318 celA PTS system; cellobiose-specific IIB component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2679 GTGAGCACATTTATTACGTCGTTGGAGAAGG 70 45 TTAGAATTTCAGGCTGTTAGCAATATCGTCTTCG 70 38 255 celB PTS system; cellobiose-specific IIC component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2680 ATGTTTGATTTAAGTAGCATCGTTGATAACGAACA 68 31 TTTTTGATGCAGCTCGATAAGCTCAGTAATCA 70 37 348 celC PTS system; cellobiose-specific IIA component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2681 ATGGACGTCAGATTAGTACGTGAAAGAGACTTTTT 68 37 CTAATGGGATAAACTCTCTCTGGCGCTGTAGA 70 47 831 celD cel operon repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO2682 ATGGAAAAATTACTTATTGTTAATGCCGATGATTT 67 26 TTAACAATCTAAAAACGACCCCAGCCGAT 70 41 762 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2683 ATGCTATCAGCCAGTGATATTAGGTT 61 38 TTACTCAGGTGCATGGGTCG 62 55 177 none hypothetical protein Other 5.I Unknown [1066] none YPO2684 GTGGTGAAACAGTTTACATCAGGA 60 42 TCAGTCTGGCGTTGATACCG 62 55 369 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2685 ATGAAAACTATTGAACTCGACGAAGAACTTTATCG 68 34 TCAGATAGTTCCGCACACTTTGTCAGTCAA 70 43 528 seqA putative negative regulator of replicationinitiation Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2686 CAAAGCGATTTAATTAACGTAGCTCAGTTGACATC 69 37 TTATTTCGCCTCAGCCAGCACTTCG 70 52 255 pgm phosphoglucomutase Central intermediary metabolism 1.C Central intermediary metabolism [63] Glycolysis / Gluconeogenesis. Pentose phosphate pathway. Galactose metabolism. Starch and sucrose metabolism. Streptomycin biosynthesis. Erythromycin biosynthesis. Aminosugars metabolism none EC:5.4.2.2 YPO2687 ATGAGCACTTGGTTAATTTACGCCCTGC 70 46 TTACCCCAGAGCCACCATCAATGC 70 54 429 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2688 GTGCGTATTGCACTGGAGAGTGAGGG 70 58 TTAGGGAATAAAACGATAGCCAACACCGG 70 45 630 kdpE two-component regulatory protein responseregulator KdpE Broad regulatory functions 2 Broad regulatory functions [235] none YPO2689 CAAACGCTGGCAAGATGTCGAAGAG 69 52 AGGTTGATAAAGACCCGCTCCAGCA 69 52 255 kdpD two-component regulatory protein sensor kinaseKdpD Broad regulatory functions 2 Broad regulatory functions [235] none YPO2690 ATGTCATCGACAACATCTCCATTATCATCTGC 70 41 TTACGGTTTTGCCGGGTTGGC 69 57 651 kdpC putative potassium-transporting ATPase C chain Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2691 TGACTCACAAACAACGCGCGATTTT 70 44 GCCACCCAAACCGTAAATCCACAGA 70 52 255 kdpB putative potassium-transporting ATPase B chain Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2692 GCCAGCTTCATGCTGGTGTTGTTCGTGT 74 54 GCTAACCAGACTTGTAGATGTTCAGCGACCGG 74 53 255 kdpA putative potassium-transporting ATPase A chain Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2693 ATGTCCATGTACAACGCATACCCATTGC 70 46 AGTAAAAGTCACGACCTGCCTTTTCTGATTG 69 42 207 ybfA putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2694 ATGCCGGGAACCGATCGG 68 67 TTAATCTTGTAAATAAAAAGAAAAATAGCGCTGCT 66 26 483 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2695 ATGTCTACGCATCTGGTCTGGTTCCG 70 54 AATAACATGAAGGCTCCTTGCGATTAGGGATCCTT 73 43 255 phrB phr putative deoxyribodipyrimidine photolyase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2696 ATGTTATTGAAATATCTCTCGATTAAATCTGCATC 65 29 TCACTGGAATTTCTGGCTATCACCTTGTTC 69 43 255 none putative 3';5'-cyclic-nucleotidephosphodiesterase Degradation 1.A Degradation [18] none YPO2697 ATGATGCGTAACGTTGAACTGGAAACTGTACT 69 41 TCAGGCAGGGTTAGGAATATCAATAAAGGTAACA 69 38 747 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2698 GTGCAACGAGCACGATGCTATTTACTGG 70 50 CTACCACCCTCCCGGTGTTGCC 70 68 546 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO2699 ATGTTGAATATCATCCGCGCAGGTATTTATACC 70 39 TCACTGGGCCTCCGGGGTAAC 69 67 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2700 GTGAAAATTGATTTAAATGCTGATTTGGGTGAG 69 33 TTATTGCGCTATCACGCTGATGCCTT 70 46 738 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2701 TTGGAACAAACGGTAAATCTTTGGCCG 71 44 TCATTTAGCCTCTCCCTGAGCTGCC 69 56 732 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2702 ATGATTTTCCAACAACAATACTTATATTGGCTGGC 70 34 CATCAGGAAATACAGTAAAAATACGTTAACAATCA 65 29 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2703 ATGAGACGTGTATTAATTACCGGGTTCGAACCT 70 42 CCCCCGTGATATGCAAATCATGCT 69 50 648 pcp putative pyrrolidone-carboxylate peptidase Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO2704 ATGTCCCCCTCCCTTACTTGGCAC 69 58 TTACTCCACCGCTGGCAGCTTAGGT 69 56 687 ung putative uracil-DNA glycosylase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2705 ACTGGTATTCAAATTACTAAAGCTAACAATGAAGC 65 31 CTTTCAGTGAAAGTCCGGGTAATCACATCG 71 47 384 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2706 ATGAGTGCATCTGTCAGTTTGACTACGCC 70 48 TCAAACATACCGCCGCTCCCA 69 57 255 yplA plaA phospholipase A Cell processes 4.I Pathogenicity [38] none YPO2707 ATGACAAAAATTAGTACTGCTTTTACTGATCCATT 65 29 CTATTGCTCATCAACTTCTGCAAAATCGTTACC 69 39 657 yplB putative phospholipase A accessory protein Other 5.I Unknown [1066] none YPO2708 ATGACTGTAACCAATTTTTCCGAACTCGATCTC 70 39 CTAACCAGCACTCTTGGTATCAGGTTTTGCTTT 70 42 255 srmB rbaB ATP-dependent RNA helicase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] Ubiquinone biosynthesis none EC:2.7.7.- YPO2709 AAAAACAACCGGTATTACGTGGTGGCG 71 48 TTAATAGTTTAGATAGAAATCACTGATGAGCTGGC 66 34 747 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2710 ACGATATGCAATCATCATCTGAACACATTAGCGAT 72 37 ATTTGATCAGGGTAATCAAGCGTATAGTGCAACCC 73 43 255 nadB nicB L-aspartate oxidase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.7 Pyridine nucleotide [6] Alanine and aspartate metabolism none EC:1.4.3.16 YPO2711 ATGAGCGAGCAGTTAACGGATCAGATG 69 48 CTATCGCTGAATTAGCGGCTGAACTTTGTT 70 43 576 rpoE sigE RNA polymerase sigma E factor Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO2712 ATGCAGAAAGAAAAGCTTTCCGCTTTGAT 69 38 TTACTGCTGCTGCATTCCTAAGGATTGAGTT 69 42 657 rseA mclA sigma E factor negative regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2713 ATGAAGCAACTTTGGTTTTCCGTCTGTTTAA 69 35 TCATTTTGTCGACTCCAGAACCACACTG 70 46 255 rseB sigma E factor regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2714 ATGATGAAGGAATGGGCGACGGT 69 52 TTACTGAATACGCATAGCCGTTGGTGG 69 48 456 rseC sigma E factor regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2715 ATGATTGACGAAGGAAAAATACTGA 60 32 TTAGGCATGATAAGCAGGAATGC 63 43 855 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2716 TCGACGCTGTCTGATCGGATTATTCAGATCTGT 74 45 GAAGGCCTCTTGTGGTAATTCAACGTTACCGACTT 73 46 255 lepA putative GTP-binding elongation factor Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO2717 ATGGCTAACATGTTTGCTTTGATTCTGGC 70 41 TTAGTGAATTCCACCAATTCGGCTTAAACG 70 40 255 lepB signal peptidase I Cell processes Transport/binding proteins 4.A.6 Other [104] Protein export none EC:3.4.21.89 YPO2718 ATGAATCCCATCGTAATAAACAGGCTGCA 70 41 TCATTCAAGCTCCAACTGTTTCAGCG 69 46 681 rnc ribonuclease III Macromolecule metabolism Degradation of macromolecules 3.B.1 RNA [13] none YPO2719 AAAAACGTATTGTGGTTTTATTGCCATTGTAGGG 70 35 TTATTTCAAATCGTCGGTATAGCCTAAGCTGC 69 41 255 era rbaA putative GTP-binding protein Cell processes 4 Cell processes [1] none YPO2720 ATGGACGGTTGGCAACGCG 69 63 CTAGGGTGAAGGATCGGCTGGAGG 69 62 726 recO DNA repair protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2723 TTGGGCCGTTGGTGGAGATATAA 66 48 TCAATAATTAACAAAAATTTCTACGCGG 63 29 none putative OmpA family protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2724 AGCATTGGCGAAAAATCCAGCGTTA 70 44 TATAAAGCCCCGGGATCCCTTCATG 70 52 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2725 AACCCATTAATTCCTTGGCAAGCGG 70 48 ATTGGCAACAAGGGTAACGGTAGCG 69 52 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2726 ATGCCAATGCTACTGGTATTAACTTCACCCAATA 70 38 TTATAGATGGCTGTCCAGCCCTAGCTTGTAGA 70 47 849 none hypothetical protein Other 5.I Unknown [1066] none YPO2727 TGAATACCACGAATTTAACTGAGTTATTAAAAAGC 65 29 CTATCTCAAATACAATCTCTTCAATATCAAACAGC 65 31 807 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2728 AAAAACAGTTTTTACCGGCGTTGTTAGAGC 68 40 TCAACGGGCGCGTAGCTCTG 69 65 480 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2729 ATGTCATTAAGCAGAAAAGCCG 61 41 TCAGCGCGCTCCGGACATA 69 63 348 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2730 GTGCAGACATTACCAAACTGTCCAAAATGC 70 43 TTAGCTTTTCTTAACAAATTCAGACTTGAGCTTCA 68 31 342 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2731 ACCACGGATGGAATAGCAGAATGGC 69 52 CTGAACCACTCGAACTGGAGCTGGA 69 56 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2732 ATGGAAATTTATATCGGTTTAGCTGTTGTTGCCT 69 35 CTATTCCATCCGTGGTAATTTGGCTTCATC 70 43 543 lemA 3 putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2733 ATGATGAGTTTAATAAAATCCACCCTAATTTTTGG 67 29 TTATTTATTACAATGGCCGACGAGTTCTTTATAGG 68 34 471 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2734 AAAAATCTGACCTGTATCCGCGATGATC 68 43 TTAATTCACGGCGCAACACGCTG 70 52 657 ccmA putative heme exporter protein A Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2735 ATGTTTATCAGCGTGTTGCGCCG 70 52 TTACTGTATGCTCACCCGTAACGCTGCT 70 50 660 ccmB heme exporter protein B Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2736 ATGTGGAAATGGTTTCATCAATTTGCCA 70 36 TCATACGCGCGGCTCCTTGC 70 65 738 ccmC putative heme exporter protein C Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2737 ATGACCCCCGCTTTTCACTCATGG 70 54 TCACGGTCGCTTCTCCTGTAAATTGG 69 50 303 ccmD putative heme exporter protein D Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2738 GTGAACCCACGTAGAAAAAGTCGGCTCT 69 50 TCATAAGGCATTACCCGTCGTATTAGTGCC 70 47 495 ccmE putative cytochrome c-type biogenesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] none YPO2739 TTTTTATTATGTTTGGCGTTGGCGATTTCACTG 72 36 GTTTTAGCTTTTTACTCATCCGATAGCGCGGATCG 74 46 255 ccmF putative cytochrome c-type biogenesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] none YPO2740 ATGAAACCTCAATCCTCATTCAATAAGCTGATGT 70 35 CCCCCTGGTACTTTTTATACAGCGGTAAGATTT 69 42 567 ccmG dsbE thiol:disulfide interchange protein DsbE Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] none YPO2741 ATGAGGTTACTCAGTCTGCTACTGGGTCTGATATT 68 43 TTTTGTAATGCGTTATTTTGTAATACGCTATTTTC 65 26 513 ccmH putative cytochrome c-type biogenesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] none YPO2742 ATGGCTTTTTGGCTGATAGTCATCATTTCG 70 40 TTAAGGGATTTGTTTATTTATTTGAACGCCTATTT 66 26 255 none putative cytochrome c-type biogenesis protein none YPO2743 ATGGAGAAAAATATGAACTTCCGCCTTACTGG 70 41 TCAATCGGCGGCATCTATGCTATCC 70 52 777 vacJ VacJ lipoprotein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] none YPO2744 ATGAACCAGAAAAACCTGTTTACCCGCTC 70 45 TAGAATGTGTAGTTGAAGTTCACACCGTATAGCAT 67 37 255 fadL ttr putative long-chain fatty acid transportprotein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2745 ATGTCAGATGCAATTAATCGTTGTAGTGCG 69 40 TTAACGCAGACCGAGTTGGAAAATCATTG 70 41 297 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2746 ATGAGTAAGCCATTACCGTTAGTGACGCG 70 48 TCACTCCACCTCCAGAATCATCGCA 71 52 255 none putative 3-ketoacyl-CoA thiolase Degradation 1.A Degradation [18] "Fatty acid biosynthesis (path 2). Fatty acid metabolism. Bile acid biosynthesis. Valine, leucine and isoleucine degradation. Phenylalanine metabolism" none EC:2.3.1.16 YPO2747 AGTGAATAATGATGTGGGCGCATCG 69 48 AGACAGCGTACCGCTTCGTTCAACA 69 52 255 faoA putative fatty oxidation complex alpha subunit;enoyl-CoA hydratase Degradation 1.A Degradation [18] "Fatty acid biosynthesis (path 2). Fatty acid metabolism. Valine, leucine and isoleucine degradation. Lysine degradation. Tryptophan metabolism.Tryptophan metabolism. beta-Alanine metabolism. Benzoate degradation. Propanoate metabolism. Butanoate metabolism" none EC:4.2.1.17 1.1.1.35 5.1.2.3 YPO2748 ATGCAAGTTTTCATTATGCGTCACGGTG 70 43 TTATCCATGACACGCCTTCGCCA 70 52 492 sixA putative phosphohistidine phosphatase Broad regulatory functions 2 Broad regulatory functions [235] Aminosugars metabolism. Thiamine metabolism. Riboflavin metabolism. Vitamin B6 metabolism. Nicotinate and nicotinamide metabolism none EC:3.1.3.- YPO2749 ATGACGAATATCGACATTTATTTCGACAGATGG 70 36 TCACTCTTCTAATTCAATCAATAACAGCAATGCT 67 32 612 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2750 TTGGACAAGATTTTCGTCGATGAAGCA 70 41 TTAATCACGGTACATGCTGAAATGTGCAG 69 41 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2751 ATGGCTGGGAACAGTATTGGGCAGTT 70 50 CTACCAGCGCGGAACGTCTGAAG 69 61 255 aroC chorismate synthase Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:4.6.1.4 YPO2752 ATGAAAATTGAGATAGTGTGTATGTCGGCATTGT 69 35 TTACGGCCGTGGCTGCCAA 70 63 483 mepA putative penicillin-insensitive mureinendopeptidase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO2753 ATGGATTGGTTTACCCTTGGTCCTGC 69 50 CTATGCAAAAACATGCTGTCCCAGCC 70 50 807 yfcA putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2754 ATGAATCATCATTATCAGCAGTTAATCGATATCTT 66 29 CTAAATCAAATCTTCCGGGTAAGGAAAGAGTTCA 70 38 543 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2755 ATGATCGCAGAATTTGAAACACGTATCTTGG 70 39 TCAAGAACGAAGGGCGTGTGCTAATAAAC 70 45 279 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2756 GTGAACCAACGCCCAATCCAAACC 71 54 ACGGTTAGGATTCAATGCTGCCAGC 69 52 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2757 ATGAAGCGTGCAGTAATTACTGGCTTGGGTATT 71 42 TTACTTCTGATATTTACGCATCACTAATGTTGCA 67 32 255 fabB fabC 3-oxoacyl-[acyl-carrier-protein] synthase I 1.H Fatty acid biosynthesis [33] Fatty acid biosynthesis (path 1) none acyl-carrier-protein YPO2758 ATGCAGGGAGTTAGCTGCCCTTGC 70 58 TTATTGCAGTGCGTAATCAGCCGC 69 50 750 none putative aspartate/glutamate racemase Other 5.I Unknown [1066] Alanine and aspartate metabolism none EC:5.1.1.13 YPO2759 ATGTCTAACTTCAAGAAAAGTGTATTAGTTGCTGC 66 34 TTAATTATAAGCGAGGGTAAAGTTAGCTACGCTGC 69 40 531 smfA mrpA putative mannose-resistant/Proteus-like fimbrialprotein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO2760 ATGCAACCTTTGAACGGCCCAG 69 55 TCAAAGAAAAATCGCCAATAGAAAGGCTATCAC 70 36 255 flk putative flagellar assembly regulatory protein;Flk Cell processes 4.D Chemotaxis and mobility [86] none YPO2761 ATGAATGTTTTATTTCCATTGTTTGCGGTGAT 70 31 CTATCTACTGTTTTTGTTGTTTGGGATATGTCCAG 68 37 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2762 ATGACAGGACCTGATTTTCCTGTAGTCACCTC 70 47 TTAGTATAAGCCACTATTGCCCCGCCG 70 52 786 none putative AraC-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2763 GTGGCTTATACTAAGCCCCCTGTTTTTCATCT 69 44 TCACAGCAATTGAGTAGTAAAACCTAGCTGCTG 69 42 255 pdxB putative D-isomer specific 2-hydroxyaciddehydrogenase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.6 Pyridoxine [4] "Fructose and mannose metabolism. Galactose metabolism. Ascorbate and aldarate metabolism. Bile acid biosynthesis. Glycine, serine and threonine metabolism. Lysine degradation. Phenylalanine metabolism. Nucleotide sugars metabolism. Glycerolipid metabolism. Tetrachloroethene degradation. Benzoate degradation. Butanoate metabolism. Vitamin B6 metabolism" none EC:1.1.1.- YPO2765 ATGTCTGACGGCTGGAATATTGCTCTATTAGG 69 44 TCAGTATAGTTGCTCCTGTAACAGGCGCTC 69 50 255 asd usg-1 putative aspartate-semialdehyde dehydrogenase Central intermediary metabolism 1.C Central intermediary metabolism [63] "Glycine, serine and threonine metabolism. Lysine biosynthesis" none EC:1.2.1.11 YPO2766 ATGTCCGGGTTTGAATTAGATCAGGAAGAAA 70 39 TTAACCCTCGTCATCCGCCAAAAAC 69 48 882 truA hisT asuC leuK tRNA pseudouridine synthase A Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Pyrimidine metabolism none EC:4.2.1.70 YPO2767 TGGAATTTATACGTTTCGTCATAGATTTTATTTTG 66 26 TTTTTGACGTACCGCAGCACGC 69 55 663 dedA putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2768 ATGAGCTGGATTGAACGAATTCTTAACAAAAGC 70 36 TCAGACATCTGCCTGATTTTCAGGCT 68 46 255 accD dedB usg acetyl-coenzyme A carboxylase carboxyltransferase subunit beta 1.H Fatty acid biosynthesis [33] Fatty acid biosynthesis (path 1). Tetracycline biosynthesis. Pyruvate metabolism. Propanoate metabolism none EC:6.4.1.2 YPO2769 ATGAACAATCATCAAACTCCCCAAGCC 69 44 TCACAAATGCAATGCTGCCATAACATG 70 41 255 folC dedC putative FolC bifunctional protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.2 Folic acid [9] Folate biosynthesis none EC:6.3.2.12 6.3.2.17 YPO2770 GTGCGAGTGGCAAGTCAGTTCCAG 69 58 CTAACGCGACGTTGTATAAGGCTTAACTTGC 69 45 729 dedD putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2771 ATGGTCTGGATTGATTACGTCATTATAGGAATT 66 33 TCATAAGCCGCTTCGAATCGGTAATTG 70 44 510 cvpA dedE putative colicin V production protein Other 5.B Colicin-related functions [10] none YPO2772 TATTGTCGGTATCGCCGGTTTTACACCGGTAA 74 47 TAACCTTCGTTATGCATCTCTAAATTTTCCGCTTC 71 37 255 purF amidophosphoribosyltransferase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism. Glutamate metabolism none EC:2.4.2.14 YPO2773 ATGAAGCGACTTATTATTGGCATTAGTGGTGC 70 41 TTAGTTTTTACCTTGCCAGCGCGTAAACA 70 41 573 ubiX probable 3-octaprenyl-4-hydroxybenzoatecarboxy-lyase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] Ubiquinone biosynthesis none EC:4.1.1.- YPO2774 ATGAATAAAAAGCTGCGAGTTCTTCCTTTGGTA 69 36 TTAATCACCGTAAACATCAAAATCGAAGTATTTTT 67 26 783 hisJ histidine-binding periplasmic protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2775 ATGCTGGATGGATATTCCAAACTGATATTTGAAG 69 35 TCATAGCTCAGCCCTCTTCACCCCAT 70 54 687 hisQ histidine transport system permease proteinHisQ Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2776 ATGATTGAAATCTTACATCAATATTGGCAGGCAT 70 32 CTAATGCGATGCCTGAGGTTGAATATGG 69 46 717 hisM histidine transport system permease proteinHisM Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2777 ATGACGAATACGTCCTATATTAAAAATGCGGAAAC 69 34 TTATTTCAGTGAGCCAGAAAGAAACTGCTGTAAAC 69 37 798 hisP histidine transport ATP-binding protein HisP Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO2778 ATGCGTATTTTAATCACCGGTGCTACAGG 69 45 TTTTTCAGTACATCACGCAGTGCATCTTCC 71 43 909 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2779 TATCAAAGTTAATTGTTCTTATATCTGTGAACCCA 65 29 TTAACGCAAAGGTTGGGAGACTAGCTCATC 70 47 693 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2780 ATGGTTCGTTACCGGCCACGG 70 62 TTTTTAGTGCCAATCGGGCGACAA 70 46 561 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2781 ATGGTGGAGCAAAATCCAGCAGCA 70 50 TTACGCTTCGCGGGGAGTGATTTT 70 50 549 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2782 ATGGATTTCTTTCGTTTCTTAATGAGTGATGTGC 70 35 GAACGATAATCCCCAGTAAAATACCCAGCGC 72 48 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2784 GTTCGGGCGCTGGTGGGG 71 78 TTAATCCACTTTCTCAACACGAATTAGCCTACT 67 36 255 pbpC penicillin-binding protein 1C (partial) Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO2785 ATGGATAAACAAGATTGGCATCCGGC 70 46 TCAGCCTGGATTAACTGACTCTGCGG 70 54 246 sfsB nlp sfs7 putative DNA-binding protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2788 ATGAAGTATAACTCAGTTTTAAAAACTTTTGTT 60 21 TTAAATTAACAAAAAATCAGCTAACCCA 61 25 582 none hypothetical protein Other 5.I Unknown [1066] none YPO2790 GTGGTTAAAATAAACAGGCCATTAGTT 61 33 CTATGGACATAGCTTTATATCTTTTACGTATTT 60 27 402 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2792 TTGTTTGGTGCATTTGCAGT 60 40 CTATGGACATAGCTTTATATCTTTTACGTATTC 61 30 381 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2793 ATGTCTAATTTGATTTATGCAAGTGTTAATG 62 26 TTACTTCTCCCAAAAATAATTTTGGTAA 61 25 573 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2794 ATGATGAAAAATAATAAAAATATAAATAAAGATGA 59 11 TTAGTGCTGTCGTTCCAAAATTG 61 39 252 none hypothetical protein Other 5.I Unknown [1066] none YPO2795 ATGGAAAAAGAAAAAAAGACGCTATT 61 27 TTAATGCAATACAGATGATGTTTTTTCA 62 25 240 none hypothetical protein Other 5.I Unknown [1066] none YPO2796 AGGTATTGGCTTTTACACCGAATGTGGTGGGAATA 74 43 CATTGAGATAATCCACTTCAGCAAAAATGGCGGT 74 41 255 yapC putaive autotransporter protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2797 ATGCTAAACACAGACGCACGGCAAC 70 52 CTAAATAATGGGTGACAGGTTGTGTAATCCCTG 69 42 582 none hypothetical protein Other 5.I Unknown [1066] none YPO2798 GTGACGACACCACGCCATGAACTG 71 58 TTATTCGTTGAAGAACCAATAGCCCTGATTAATC 69 35 309 none conserved hypothetical protein (partial) Other 5.I Unknown [1066] none YPO2801 GCCAGTTGCAGTCACTCTTGCCAAT 69 52 GAAAACTGGCTGCAACCCCCAGTAA 69 52 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2802 ATGCTTAAGAGAAAATGGCTCAGCATCG 68 43 TTACTTATTCTCTATGCGCTGCAAATCGGC 70 43 531 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2803 AGAAAAAGCAGCCTTTGTTTCCGGC 69 48 TGGATATCTCTTGACGAACGCCCAA 69 48 255 bglB putative beta-glucosidase Macromolecule metabolism Degradation of macromolecules 3.B.4 Polysaccharides [13] "Cyanoamino acid metabolism. Starch and sucrose metabolism. Flavonoids, stilbene and lignin biosynthesis" none EC:3.2.1.21 YPO2804 ATGAAAACATGGATAGCGCGTCTTTTAGGTAAA 70 36 CACATAACTTATGCAAACGCTCCCGCATCTGTT 74 45 255 none hypothetical protein Other 5.I Unknown [1066] none YPO2805 ATGCAAACAGTAAAACTGAACAACGGTATTGC 69 37 TTAGACATCAAGTTTACGGCCAGTCAGCC 70 48 852 none putative aldo/keto reductase Other 5.I Unknown [1066] "Fructose and mannose metabolism. Galactose metabolism. Ascorbate and aldarate metabolism. Bile acid biosynthesis. Glycine, serine and threonine metabolism. Lysine degradation. Phenylalanine metabolism. Nucleotide sugars metabolism. Glycerolipid metabolism. Tetrachloroethene degradation. Benzoate degradation. Butanoate metabolism. Vitamin B6 metabolism" none EC:1.1.1.- YPO2806 ATGCAAAAACGTTATCTCGGTAAATCCGG 70 41 TTAACGACCCACTCGAGCCTGCAT 69 54 255 none putative aldo/keto reductase Other 5.I Unknown [1066] none YPO2807 ATGCTAAAAGAAAACTTCAATGAACTGCAGAGCTT 70 34 TTAATCCGAATAACGCAGTGCATCTATCATAAGC 70 38 894 ptxR putative LysR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2811 ATGGATCACATTAATAATGCTAAACGC 62 33 TTATAGCTCCAGGATCTCTTGAATCC 62 42 306 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2812 GTGAAAATTCATCTATCGAGCTGG 61 42 CTAATCAACCAACGTTAACGTCAGA 62 40 372 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2813 GGTTGAGTCCGCACTCACGCAGAACAAATA 74 50 TCAGAGCGATATCTGGCATAGCGTTCC 70 52 255 ynbD putative dual specificity phosphatase Other 5.I Unknown [1066] none YPO2814 ACCGCCAGCGATGAAACATCGTTGTATTTT 73 43 AGCGACACGGTGAAAATGCCAAACTCATC 74 48 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2815 ATGTTGCGCTGGATTTTTACGCTGTG 70 46 TCATGAGGTTTTCCTTGTGGCAAGTTG 69 44 624 none putative acyltransferase Other 5.I Unknown [1066] none YPO2816 ATGCCTGATTCCCTGCAGACGTTGTAT 70 48 TTAAACGTAGAAGTAGTGATAGAAGTGGAAGAACA 65 34 255 ynbB putative phosphatidate cytidylyltransferase Other 5.I Unknown [1066] Glycerolipid metabolism none EC:2.7.7.41 YPO2817 GTGACATTGTATGACATTAAACCTCAGTTTCAGAA 68 34 TCAGGCATTTTTCACCTCTATCGCACTAC 68 45 603 none putative CDP-alcohol phosphatidyltransferase Other 5.I Unknown [1066] none YPO2818 TTGCGAAAATATGATCGAACAG 60 36 TCAGTTGCAGTGATTCATATCCG 62 43 234 none hypothetical protein Other 5.I Unknown [1066] none YPO2819 GTGCGCGTTAATGGTAACACAGCATG 69 50 TCACGGTGTCAGCACGTTATCTACCC 69 54 147 int phage integrase (partial) none YPO2820 ATGATCACACATTCGCCACA 61 45 TTAAATTGGGTGACATGCAGATAG 60 38 339 none hypothetical protein Other 5.I Unknown [1066] none YPO2821 ATGGCCCATCTTCATATCAAAGAGAGACTTTC 69 41 TTAGATAATAGATTTAGTTGCGGCTAAAACGTGA 66 32 498 none hypothetical protein Other 5.I Unknown [1066] none YPO2822 GTGGAATCATTACCTGACGAGTATG 61 44 TCATCGCACTTGCAATGATC 61 45 201 none hypothetical protein Other 5.I Unknown [1066] none YPO2823 ATGGCTACAAGATATATTAAATGGCCC 63 37 TTAGCACTTCTTGCTTTGAACCC 62 43 183 none putative regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2824 ATGTCAGCAAAAATTATTGATGGTAAAACGATTGC 70 31 TCAATTTTGGCTGATGTCGTGATATTCCTC 70 40 867 folD ads putative FolD bifunctional protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.2 Folic acid [9] Glyoxylate and dicarboxylate metabolism. One carbon pool by folate none EC:1.5.1.5 3.5.4.9 YPO2825 ATGGACATTTTTCATTTGGAAAAACACCCC 70 37 TTAGGCTTTAACCTGCACTTTCATGCCTTG 70 43 213 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2827 ATGAAGATCGTTGAGGTGAAGCA 63 43 TTATTTAGTTCCGAAAATCTTATCCCC 62 33 "upp, uraP" uracil phosphoribosyltransferase Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Pyrimidine metabolism uppuraP EC:2.4.2.9 YPO2828 GTGACCAACAAAACCTCTCTCAGTTATAAAGACGC 70 43 TTACGGATTAATGATGACTTGCTCAGCACC 70 43 255 purI purM putative phosphoribosylaminoimidazolesynthetase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism none EC:6.3.3.1 YPO2829 AAAAATTGTCGTATTAATTTCAGGCCAGGGAA 70 34 TTATTCGGCAGCATAACCCTGCAAC 68 48 639 purN putative phosphoribosylglycinamideformyltransferase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism. One carbon pool by folate none EC:2.1.2.2 YPO2830 ATGTCTACCACTAGCAGCGTCAGATTACGC 69 50 TTTTTATCGATGGTGTTTTATATTTAGCCAAAT 65 24 546 speG spermidine acetyltransferase 1.E Polyamine synthesis [5] Arginine and proline metabolism none EC:2.3.1.57 YPO2831 ATGTCGCTCTCCTGCCCAGAAGTG 70 58 TCACTGACTGAGTGCCAGCAAAGACAAT 70 46 834 fliB nml putative flagellar associated lysine-N-methylase(pseudogene) Cell processes 4.D Chemotaxis and mobility [86] Ubiquinone biosynthesis. Androgen and estrogen metabolism. Histidine metabolism. Tyrosine metabolism. Tryptophan metabolism. Aminophosphonate metabolism. Selenoamino acid metabolism none EC:2.1.1.- YPO2833 ATGGGACTTTTGACGCCGAATTCG 70 50 TTAACCATAGCGGCCAGTAATATAATCTTCCGTC 70 41 813 pstb putative phosphate transport ATP-bindingprotein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2834 AACACGGGTCTTATAAACACGGGCCTTATAAACAA 72 40 GTGACGAATCCCCATCGCGGCTA 72 61 255 pstA putative phosphate transport system permease Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2835 ATCAGTTCGTGGTGAAACGCAATGC 70 48 TCTGCCAGCGTATTCACCAAAAACG 69 48 255 pstC putative phosphate transport system permease Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2836 TATTGCAGGAAGCGGCGGATAAGAG 69 52 CTGCTCCGGTTGTTCCAGTGCTTTT 70 52 255 ppk polyphosphate kinase Central intermediary metabolism 1.C Central intermediary metabolism [63] Oxidative phosphorylation none EC:2.7.4.1 YPO2837 CTAACCAATAATTCGACTACCAAACCGCAGGAAAT 72 40 CCTCATCCGGCTCTTCTTCTTCAATAACCAGCT 74 48 255 ppx putative exopolyphosphatase Central intermediary metabolism 1.C Central intermediary metabolism [63] Purine metabolism none EC:3.6.1.11 YPO2838 TTGCTAAGCGATAAAACAAAGGC 62 39 CTACGGGCTAAGGTCTGTTTGA 61 50 213 yfgG putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2839 ATGCCCGTGCCTATTATTCCCGTG 70 54 CTAGACTAAAAATAGGGTGGCGAGGCCTAAAAA 69 42 255 mgtE putative divalent cation transport protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2840 ATGTTCATTGGATTTGACTACGGCACAGC 71 45 TTATCGGTACAGGGTTTGGGCCCA 70 54 255 none putative heat shock protein Other 5.I Unknown [1066] none YPO2841 ATGCCGAAACCACAAAAGGCACTG 70 50 TTATGGGGACACTGGATGATGGCGTA 70 50 849 none putative ABC transporter permease Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2842 ATGAGCCAAACCGAGATGGTCACC 69 54 CTAATGAATCGCGGTTTCAGCCTGG 70 52 255 none putative ABC transporter permease Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2843 ATGTTTAAAATAATGACACTGACTACGCTGCTCG 69 38 TTATTTAGCTGCCCAAGAGTTGAAGCGTTG 70 43 255 none putative transport system periplasmic protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2844 ATGGCATACCAGCAGGAGCGAATC 69 54 TTAGCTCGCCAGTAGGCGGGTAAGAAT 69 52 255 goaG gabT putative aminobutyrate aminotransferase Central intermediary metabolism 1.C Central intermediary metabolism [63] Glutamate metabolism. Alanine and aspartate metabolism. beta-Alanine metabolism. Propanoate metabolism. Butanoate metabolism none EC:2.6.1.19 YPO2845 GCGATCACTGCTTTCTGACCTGCTGTTACAG 73 52 GGTTTATCCGCCGTCTGAGATAGCTGACTATCG 73 52 255 none putative GntR-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2846 ATGAGAACCTATGTCAGCTTCAAAAATATCAAGAA 67 31 TCAGTGTGTCACCCCCTCCAGTG 68 61 255 none putitive ABC-transporter ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO2847 AATCTCAATCCAAACGCACTTCCCGATTATTCGTA 74 40 TCAGGATTTCTCCGCAGCCGTG 70 59 255 yegM putitive HlyD family secretion protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2848 CGCCATGTATTTTCTGGGCTTTTCG 69 48 GCTCCTGTCCGTTCAGCAACTCAGA 70 56 255 yegN AcrB/AcrD/AcrF family membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2849 TTATCGACTCGGTGCAGGATGTTCG 70 52 CGAAGTCAACCATCATGATGGCGTT 69 48 255 yegO AcrB/AcrD/AcrF family membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2850 ATGGTAACGCAAGCAACATCTGTGCG 71 50 CTAGCGGGCCAAATGACGATTGG 70 57 255 yegB putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2851 ATGATAAGGATCGGCATTACCGGAAAACT 69 41 CCCCCTCGTTGGTATAACGCAGG 69 61 255 baeS two-component system; sensor kinase(pseudogene) Broad regulatory functions 2 Broad regulatory functions [235] none YPO2853 ATGCACGAGTCGCCTCTGTCTGC 70 61 TTACAACAAACGGCACATCTCTGCTTCC 70 46 720 baeR two-component system response regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO2854 ATGGCCTTGGGTCACTATGAGATTAAGAAAGC 70 44 TTACAGCGTCAAATCTTTGATAACCGTAGACAGG 70 41 339 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2855 ATGTCTTCATCATCATTTACAACGGAAAGACC 69 37 TTACGCTTTTTCGTGGGGATTGCG 71 50 255 none putative protease Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] Lysine degradation. Biotin metabolism none EC:3.4.-.- YPO2856 ATGCCACACACTCTTTTGATCCTCAACG 70 46 TTAGCCTAACAATGGGCAATTCGGTG 69 46 891 none putative diacylglycerol kinase Other 5.I Unknown [1066] none YPO2857 AAAAACCTCCATTGTCTTTTAGCGGGAATATTATT 69 31 TCAGCGCCAGTTAGGATCTTTCTCTAGCTG 70 50 510 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2858 ATGTCACGGGTTGGATGGGGG 70 62 TCAGCCAGCGACTGGTCCCG 71 70 747 none hypothetical protein Other 5.I Unknown [1066] none YPO2859 ATGAAGCGTATTAATACACTGACGATTGCCG 70 42 TTACCACCATTGGTGAAAATGATGAACAGG 70 40 801 thiD putative phosphomethylpyrimidine kinase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.8 Thiamine [11] Thiamine metabolism none EC:2.7.4.7 YPO2860 TTGAGATTGACGATGGCCG 63 53 CTACTCTCTTACCTTAGTCACCTTGTTACTC 60 42 480 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2861 ATGACATATAAAAAGTATAACTCCAGTTGGG 62 32 TATCTCAAATCCTCGTGCCAG 60 48 255 none hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO2863 GTGAAGATATCAAAAACAGGCAATTACA 63 32 TCATTTAAGTCGCCCTAATCCATTA 62 36 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2864 ATGAATAATAGATTATTTAAAACATTAGGTGCA 61 21 TTATCTACAAAGTGATAAGTCTTTTACATAAGTAT 58 23 396 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2865 ATGAAAAATAGACCTTTCAACATTCTATTT 60 23 TTATCTACAAAGTGATAAATCTCTTACATAAAAAT 59 20 396 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2866 GTGAAGTGGATCAGGGTAATTGA 60 43 TTATCTACAAAGTGATAAGTCTTTTACATAAGTAT 58 23 420 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2867 ATGAAAAATAGATTATTTAAAACATTAGGCG 61 23 TTATTTACACAGTGATAAGTCTCTTACATAAGTAT 59 26 399 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2868 ATGGCTAACTTAATTTATGCAAGTATTGA 61 28 TCAATAAACTCTTTCATCCCATATGC 62 35 480 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2870 CTTATTCTTGATTTCGGCTCGCAGTACACCCA 73 47 CTTGCCGCTGATATCATAAACTACGCGCGAG 74 52 255 guaA putative GMP synthase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism. Glutamate metabolism none EC:6.3.5.2 YPO2871 AGAAGCACTAACATTTGATGACGTTCTCCTGGTTC 72 43 CATACGATAATTAGGTGACTCTTTAGTAATCGTCA 65 34 255 guaB guaR inosine-5'-monophosphate dehydrogenase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism none EC:1.1.1.205 YPO2872 GCAATCTTCCGCCTCCTCAATTTTTACTGTC 71 45 TTTTTCTGACGGCTTTTCTTCGCTACG 69 44 255 xseA exodeoxyribonuclease VII large subunit Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO2873 GTGGATGCATTATGTCCGGTTTGCC 70 52 TCAGCTTACCGGTAAGTAATTGAAGTGGACAC 69 44 225 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2874 ATGTCTTGGGAAACCTGGAGTTTCGC 69 50 CTACATCACACCCAGCGAACGTAAAAAGTAGA 69 44 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2875 CGGGCGCCCGAATGTGGGTAA 74 67 TTTCAGATGAGACATCAAACGTTTACGTTTACGCA 73 37 255 engA putative GTP-binding protein Other 5.I Unknown [1066] none YPO2876 ATGCAATTGCGTAAAACACTCTTAGTAGGACTGG 70 41 TTAACGGGTGAACGCGTATACCGTACC 69 52 255 yfgL putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2877 GTGGAAGTCTATACCACTGAAAATGACCAGGTTG 70 44 TTAGCTGGACAAGTTATTCAGTTTCATACGCAAC 69 38 636 yfgM putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2878 AAAGAACATTCAAGCCATCCGTGGTATGAACGATT 74 40 TTAACCCAACATCAAAGCCAGACGC 68 48 255 hisS histidyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Histidine metabolism. Aminoacyl-tRNA biosynthesis none EC:6.1.1.21 YPO2879 ATGCATAACGGATCCCCTATTATTC 62 40 CTATTTATTATCATCCAATTGGTTGATAACA 62 26 "aarC, gcpE" putative acetyltransferase Other 5.I Unknown [1066] none YPO2880 ATGAATACTGAAGCCTCCCAAGATCAAACTGTTA 70 38 CTACTCTACACAGACAGTCAGGCGGGCTAC 69 57 255 yfgA putative DNA-binding protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2881 ATGAAGCTGACAAAACTGTGGAGAGTTTGC 69 43 TCAGTATTCATTAGCTAGAAAATGCTGGTACTGTT 66 34 750 none putative fimbrial biogenesis protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO2882 ATGTCTGAACAATTATTAACTGCATCAACGCC 69 37 TCAGACTGTCTTAATCGCAATAGGTTCACCC 70 45 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2883 ATGGCTTTAGAACGTACTTTCTCGATTATCAAACC 69 37 TTAGCTACGGGGAAAAATTTCATCTGCC 69 43 429 ndk nucleoside diphosphate kinase Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Purine metabolism. Pyrimidine metabolism none EC:2.7.4.6 YPO2884 CGGTCTTTTGAAGCCGATGTGGATT 69 48 ATCTGGATTGGTTAATGACCCGGCA 70 48 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2885 TTGCTTATTTTTTATAGCCTGAATAATTCA 62 23 TCAAAATTTCCCTGGCAGG 61 47 258 none hypothetical protein Other 5.I Unknown [1066] none YPO2886 CACCACCCTGACTGGCGGTACTTTT 70 56 TCACCGTCACTTGGTTGTTTTTCGC 69 48 255 yapA putative autotransporter protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2887 TAGCACAACAAGCAATGGCAAAGGC 69 48 GGCGCTGGTGACATGAATATCCTGA 70 52 255 yapB putative autotransporter protein (pseudogene) Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2888 ATGAGTTTTCCGCCCCCATCTATTGA 69 46 TCAGTGGTTCGTCGAAGGAATAACATTTCTC 70 42 255 none hypothetical protein Other 5.I Unknown [1066] none YPO2889 ATGACAACAGAAATAATGCAAATATCCCTGTCTCA 70 34 TTACTGTTTTGCTTGCGCTAACAATAAGTTGG 69 37 255 pepB peptidase B Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO2890 ATGAGTTTAACGTGGCAAGATACCCGC 69 48 TCACTCAAACTCATCTAACCAGACCAGTAAGATCG 70 43 201 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2891 ATGCCCAAAATAGTATTTCTGCCCCATAAAGA 70 37 TTAGTGTTCTCGGGCATGGTTAATGGTATAGC 70 44 336 fdx adrenodoxin family ferredoxin Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO2892 ATGGCCTTATTACAAATTAGTGAGCCGGGT 69 43 CTAAAGCACGGCGAATGGAAGCGTCC 74 58 255 hscA hsc chaperone protein HscA Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO2893 ATGGATTATTTTACGTTATTCGGGTTGCCG 70 40 TCAGGCAAAATCGTCAAACAAGCG 69 46 525 hscB chaperone protein HscB Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO2894 ATGTCGATATCAATCAGCGACAGTGCTG 69 46 TCAAACGTTAAAGCTTTCGCCGCAT 70 44 324 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2895 ATGGCTTACAGCGAAAAAGTAATCGATCATTACG 71 38 TTACTTGGCAGTATGCTTGCTTTTGTAGTCG 69 42 387 nifU NifU family protein Other 5.I Unknown [1066] none YPO2896 ATGACCGAATCAAAAGTAAAGACACCGATCTATCT 69 37 TTAATGATGGGACCATTCAATGCTGCTG 70 43 255 iscS nifS yfhO putative aminotransferase Other 5.I Unknown [1066] none YPO2897 ATGAGACTGACATCCAAAGGCCGCT 70 52 TTATGCGCGCAGATTGACGTTAATCG 71 46 495 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2898 ATGCTACACAACATTCGTATTGTCTTGGTTGAA 69 36 TTAATCCTTACTCTTACCCGCCGTATCACC 68 47 774 none putative SpoU-family rRNA methylase Other 5.I Unknown [1066] none YPO2899 ATGCATCCGATGCTGACTATCGCC 70 54 TTAACGCTTTAACGCATCACTGATTTCGTTG 71 39 804 suhB putative inositol monophosphatase familyprotein Other 5.I Unknown [1066] Streptomycin biosynthesis. Inositol phosphate metabolism none EC:3.1.3.25 YPO2901 ATGTCAGTAGTTATTGCTCCGATTCCACGG 70 47 TCAGCGACCAAATGGACGAACAG 68 52 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2902 ATGCGCTATGTGTTACATTATAACGGTTTTATTAC 65 31 CTACTGACATTGAAGCGTCACTTGTTGGG 70 48 675 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2903 CCTTTAAGCCTCGGTTATCTGATGATCAACCGCTA 74 46 CTAAGGCAGTTCCAATATGCGGCATAACTG 70 47 255 none putative RNA-binding protein Other 5.I Unknown [1066] none YPO2904 ATGGTATTGCAATCAACACGTTGGCTATC 69 41 TTAGCTGGCTAATTCATTTGGGTTCGC 69 44 255 hcaT putative transport permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2905 ATGGTTTTTATGAATAAGACATTACTGGTCTCTTC 65 31 TTAGAACCGGTAACCCGCGCC 69 62 549 ail attachment invasion locus protein Cell processes 4.I Pathogenicity [38] none YPO2907 ATGTTAAAGCGTGAAATGAACATTGCCG 69 39 TTATGCGTAAACCGGTAAACGAGCGC 70 50 255 glyA serine hydroxymethyltransferase Central intermediary metabolism 1.C Central intermediary metabolism [63] "Glycine, serine and threonine metabolism. Lysine degradation. Cyanoamino acid metabolism. One carbon pool by folate. Methane metabolism" none EC:2.1.2.1 YPO2908 ATGCTGGATACCCAAACCATCGCTATC 69 48 TTAAATGACTTTATGTGGACCGAAGCATTCG 70 39 255 hmp hmpA hmpX fsrB flavohemoprotein Energy Metabolism Respiration 1.B.7.a Aerobic [20] Folate biosynthesis none EC:1.6.99.7 YPO2909 ATGGCGCGCTATTTAATTGGCGA 69 48 TCAAACCCAACCCGGCGG 69 67 519 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO2911 AAAAATTGACGCGATTATTAAACCATTCAAACTG 69 29 TTAAATCGCTTCTTCATCCTGCTCACCG 71 46 339 glnB nitrogen regulatory protein P-II Broad regulatory functions 2 Broad regulatory functions [235] none YPO2912 CAGTTGAATTGGCTGGTCGGCGATATTGA 74 48 ATAGCGTCTATCTTTACCAAAACTGCGGGCGGTAA 74 46 255 nadE adgA putative glutamine-dependent NAD Biosynthesis of cofactors; prosthetic groups and carriers 1.G.7 Pyridine nucleotide [6] Glutamate metabolism. Nicotinate and nicotinamide metabolism none EC:6.3.5.1 YPO2914 CCAATCTACTGCTGGTTGACGACGATCCC 73 55 TTACTCTTTAAAATCGTTGGCATCCAACTCGT 69 37 255 none two-component system response regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO2915 GTGAAACAGACCGGTCTCTCTGGCA 69 56 TCAACCAGCAGTAGATTGGCCGGT 69 54 255 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2916 GTTTATTCCCCCGTTCTTTACGTCAATTAGTCCTT 70 40 TCATTCATTCTCGGCGGTTAATGGC 70 48 255 none two-component system sensor kinase Broad regulatory functions 2 Broad regulatory functions [235] none YPO2918 ATGAAAATAATCTATATCACTTTTGCCTCT 60 27 CTAGCGTGTCTGGGGAACG 62 63 561 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2919 TTGAACGCTGCTTGCAGCG 67 58 CTATTTTATATCGATCTGATATCTCTTTATCATTG 61 26 579 none hypothetical protein Other 5.I Unknown [1066] none YPO2921 ATCCAAGGCCCGGATTTAAACGAGA 69 48 ATCGAATCTTTGCCCACAGGAATCG 69 48 255 purL purI phosphoribosylformylglycinamidine synthase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism none EC:6.3.5.3 YPO2922 GCCACTCCACTGGGGATTTAACCATGTTGAAT 74 47 TTAGTCACCGATTGACCAACCGGG 69 54 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO2923 GTGTCTGCTGATAATAGTTTGCCTGCTGATAATG 70 41 TCAGAATTTACCTTCTGCTGCCCGC 70 52 564 none putative zinc-binding protein Other 5.I Unknown [1066] none YPO2924 TTGAGCGTAAAGCAAGCAGATGTTAGCG 70 46 CTACTCCAATTGCTGTAATTCGCCGGTT 70 46 696 yfhB putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2925 ATGAGTCTGGGAGCATTAATTTCTGAAAGCC 70 42 TTATAGAGCTGCGCGTAAATAGCCATGATGT 70 42 888 none putative glucokinase protein Other 5.I Unknown [1066] none YPO2926 ATGAGTAGCCTCCTACGCATCCGCC 70 60 TTAGATCAGCTTTTTGATCAGTGCTGCAC 68 41 840 none putative RpiR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2927 TGGCTTTATTGATTACTAAACGTTGTATTAATTGC 66 29 TTACAGACGATCGGCATGGTGTAGCTG 70 52 261 fdx putative [4Fe-4S] ferredoxin Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO2929 ATGGCTATTCTTGGGCTAGGAACGGATATC 69 47 TTAACTTTCAATAATCACTGTCGCGCAGG 69 41 381 acpS dpj holo-[acyl-carrier protein] synthase 1.H Fatty acid biosynthesis [33] Pantothenate and CoA biosynthesis none acyl-carrier protein YPO2930 ATGGCTGATTTGTTGCTGGGCG 70 55 TTAACGGCGCGCTTCCCG 69 67 732 pdxJ pyridoxal phosphate biosynthetic protein PdxJ Biosynthesis of cofactors; prosthetic groups and carriers 1.G.6 Pyridoxine [4] none YPO2933 ATGCCTCCTTTTGATAGAAGCAGA 63 42 TCAGGAGAGCAGATTACCCCC 63 57 none hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO2934 AGTGAGGGGCTTTTTCTTCGCCCACAACTT 74 50 TCATGAATCTCTAATCCCCCAGAGCTCC 69 50 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2935 ATGAATAAAAGTATCCGAGGGGTTTACCGG 69 43 TTAATCCATTTCTTTAATTGATATTGACAGACGCT 67 29 540 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2937 ATGTGCCTCCGTATTCATATGGGGTCTT 69 46 TTAGCTGTGCATGTTAGCTTTAACATCGTAGTTAG 67 37 570 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2938 TCAAGACGCAAAAACTAAACAAGC 62 38 ACTTCTTCAACAATCACTTCAGCG 62 40 ~1400 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2939 ATGGTTAGCAAAAGTAATTCTCAAAAGTTTATCGC 67 31 TTACTGTGGAGTATCAACAGCGGATTGTTTTG 70 41 525 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2940 TTGCTGACTACGGTTTTTATTGC 61 39 TTATTTGTAAACCAATTCAATACCAGC 61 30 555 none fimbrial protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO2943 GTGAACCGTACAGATATAGCGTGCTACATAGAAAA 68 40 GGCTCGATCCAGACTGGCTTCCCTAAAACTGTAAT 74 49 255 none outer membrane usher protein (pseudogene) Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO2944 AAATAATTATTTTAGTGTTGTCGCTGACGATAAGC 67 31 TTTTTCTTACTCACTAAGACACCTTGCCCTTGAG 69 41 762 none putative pili chaperone protein Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO2945 ATGCGTAAATTAAATCTTGCTGTATGTGCAGTG 69 36 TAAGCTAAAACGTATTCAACTTTAGCATTCACTTC 66 31 546 none frimbrial protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO2946 GATGTGGATGCCTTTGAGCGTGAAC 69 52 AACGCCCTTCACCATCTTCCATTTG 69 48 255 clpB5 Clp ATPase Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO2947 ACTATTACAATAAAGAACTCACTTTTATGCGCGAG 67 34 ACCGACACGTCCTCTTTGCATGGAGTTTAGCT 74 50 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2948 ATGTTACCCGATGAATCCGTTCACCA 69 46 TTAATCGTGATGCATTTCAGGCTCAAAACT 69 37 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2949 AGTGAACAGAGTATCGCTGAACGTGCCGGTTAT 74 48 TTACTCCTGTCCTTCATTGAGTTTCGAAATCAG 69 39 255 none hypothetical protein Other 5.I Unknown [1066] none YPO2950 ATGACAAGGAAGCTTTTTATATTGGTATTCGGTGC 70 37 TTATTTTATCTGCAGAATAATTTCTGCCATCGC 69 33 255 none putative fimbrial protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO2951 ATGATAAATACCGCAGAGCGCCCC 69 54 TCACCAGGGTTTCTCCACGACATCTC 70 54 255 none hypothetical protein Other 5.I Unknown [1066] none YPO2952 ATGTCCTTACATGCGAACGCAGGG 70 54 TTAAGACAGATCACCTAAATAGCGAGAGCACCA 70 42 735 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2953 ATGTTTAAGGTTAAATTGAATAAAACGCTCTCTCT 65 29 TCATAAAGGTTTAGGCTCCGTCATTCTTGTTCT 70 39 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2954 ATGAATGCTATACCTTCAACCTACTCAATTTTTGA 67 31 TTAATTTGCAACGGCAACATGGGG 70 46 483 none hypothetical protein Other 5.I Unknown [1066] none YPO2955 ATGTTCAGTGTGGCGATTAAAACCCGTAA 70 41 TTAAAGGCAAATAAAAACAGCGTCTTTATTACTGT 66 29 603 none putative luxR-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2957 ATGCGTTATTTGGCTGTTATTCTCCCTTTGT 69 39 CTATTGGGTAATCATTGACTCCCCTTTGC 68 45 255 mltB putative membrane-bound lytic mureintransglycosylase B Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Nucleotide sugars metabolism. Aminosugars metabolism none EC:3.2.1.- YPO2958 ATGAAAATACCTATACCCTCTATTGGCCATGTTGC 70 40 TTACAGCAGACCCGCTTCGGTCAT 69 54 255 sfuA yfuA iron(III)-binding periplasmic protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2959 AACAGCACGACAATATAGTCACCGTCCGGGTA 74 50 ATTGAGAGTAGAGAAGCCAGGTTAACGGCAGGGA 74 50 255 sfuB yfuB iron(III)-transport system permease Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2960 ATGAGCACGCTTGAACTTCATCATATCG 68 43 CTACTCGGCAAAAATATGTGCCTGGC 69 50 255 sfuC yfuC iron(III)-transport ATP-binding protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2961 ATGTTGAAGATGAAAAATCGATTTAGTAGCAAAAA 67 26 TTTTTCCCCATGGCGTAACCGC 70 55 525 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2962 ATGAGAATGGCTAACATGATTTATTTAAC 60 28 TTAATACACGCGATCATCCCA 61 43 486 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2963 ATGGGACACTCATTGCAAGAA 61 43 TTAATAACTTCTCGCTTGAACATTTATAGC 62 30 849 none hypothetical protein Other 5.I Unknown [1066] none YPO2965 TACACCAAATTCGCCCCTGCTTACG 70 52 CAGCAATAACCCCCGGTAATACCCG 70 56 255 dmsA putative dimethyl sulfoxide reductase chain Aprotein Energy Metabolism Respiration 1.B.7.b Anaerobic [24] none YPO2966 TTTTTGTTGACTCCACCAAGTGCACG 69 46 TTATACCTCCGCCGGGTTTTGGATG 70 52 618 dmsB putative dimethyl sulfoxide reductase chain Bprotein Energy Metabolism Respiration 1.B.7.b Anaerobic [24] none YPO2967 TTTTTACCGTGCTCGGGCAGACC 70 57 TCACATTGGTATTTGCCAGAGATTATAAAAGGC 69 36 777 dmsC putative dimethyl sulfoxide reductase chain Cprotein Energy Metabolism Respiration 1.B.7.b Anaerobic [24] none YPO2968 GTGACTGGGGTGAGTGAAGGCGG 71 65 TCACCGATATAGCTCACGGGGCAG 70 58 675 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2969 GTGACAAAAAATAAATCAGTGGCC 61 38 CTATATCTGCATCTCTAATATCCTTGCTG 61 38 570 none putative iron-sulphur protein Other 5.I Unknown [1066] none YPO2970 ATGAAATCTATTTTCGCCGTATGTGCTGTCAT 70 37 TTATTTCCCATCTTTACCGTATTGCGGTGA 70 40 657 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2971 ATGGCAACCCGCGCAATAAACC 70 55 TCATTTAAATGCCCCTTTATCCTTGCTCATTAA 69 33 402 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2972 GAGAAAAATATTTTTAAGCACGATGTTTATAACCG 66 29 TTATTGCGCGGGTTGCCATG 69 55 672 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2973 GTGTTCAGTTACCCCGCCAGTTATACCG 70 54 TCAGACGATTTTCCGCACGGTAACG 71 52 432 none hypothetical protein Other 5.I Unknown [1066] none YPO2974 ATGAAAAATCGCTACTCTTTACCCCAAATAGTTCT 68 34 TCATTTTCCAGGCATCATTCTGCG 69 46 525 none putative B-type cytochrome Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO2975 ATGGCTGAATTACCTGCTAAACGTCGTTTTAC 69 41 TAGGCCATTTCATTGGGGGAAGATTTGC 72 46 255 none putative aminotransferase Other 5.I Unknown [1066] Lysine biosynthesis none EC:2.6.1.17 YPO2976 ATGGCTTCATTACACATAGACGATATCCCTGC 70 44 CTAGTCTGTTATGCCCAACTGCTGTTTACCTATCT 68 43 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2977 ATGACGACTTATGCCCTGGTGGGTG 70 56 TTAGCTTGACAACTCATACCCCAATTTTTGG 69 39 255 glk glucokinase Degradation 1.A.1 Carbon compounds [66] Glycolysis / Gluconeogenesis. Fructose and mannose metabolism. Galactose metabolism. Starch and sucrose metabolism. Erythromycin biosynthesis none EC:2.7.1.2 YPO2978 ATGCAAGTCCATCACAGATCTTTGGTTGAA 70 40 TTAGCGTGAACCACGCCGATTTTC 69 50 477 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2979 ATGCATTATTCCCCTGAGGCATTGATTG 70 43 TCAGTGTGGTGAGTTAGTGCCTTCCGTTA 70 48 879 none putative lysR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO2980 ATGGTTTATCAAGCAAGTTCCTCTCGCTATCA 70 41 CTAGGCTAAAATATGTTCGATAGCGTTGATTTCTT 67 34 255 none putative ion channel protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2981 ATGTTAAATACGGGTGTTTTTAAACCAACAA 65 29 TTAGTCATCATGACGATGACCTCGCC 69 50 414 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2982 ATGGGGCCTGCTTTTATTGCTGC 69 52 CTAAAGCAGGCTAATCAGTAAATAGGCATTTAACC 67 37 255 mntH manganese transport protein MntH Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO2983 ATGTCCCATATTCTACAGTTTGCGTTAGCCC 70 45 TTAGAGCACCAAGCCCGCGATAGA 69 54 255 nupC cru nucleoside permease Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO2984 AAAACCCGTTTTGCACCTAGTCCTACCGGCTAT 74 48 TTACTGTTGAGCTTCGCGTTCGCTG 70 52 255 gltX glutamyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Glutamate metabolism. Porphyrin and chlorophyll metabolism. Aminoacyl-tRNA biosynthesis none EC:6.1.1.17 YPO2986 ATGATGGTTCCACATCAACAAATTATTCAGTGGT 71 35 CTAAGCGACTACATGTAAATTTGGCCAATGC 69 42 609 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2987 ATGTCGAATACAATTTCTACCTCATCAGTTTCAGT 67 34 TCAGATATAAACGTTAATCTGATTCTGCGCGG 70 41 348 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2988 ATGGAAAAAGAGAATTTGATTGAGATTGCTAATAC 66 29 TTAGCCGGTCTTCAGCGGCTTCA 70 57 216 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO2989 TGGAATCGATAATCCAACAAATTAATCAA 65 28 CAAACGGATCATTTCAGCTTCATCA 66 40 255 ligA lig dnaL pdeC lop DNA ligase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO2990 ATGATGCAGGATTTGCGTCTG 63 48 TCAAGCAATTGTATTCGCATCC 62 41 zipA putative cell division protein Cell processes 4.C Cell division [24] none YPO2991 GTGAGTGGTTTCTCTTATTTTGCTCAAGGATGG 70 42 TCATGGCAGCTGAATAAACTGGCTGC 70 50 735 cysZ putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO2992 TGAGCAAGATATATGAAGACAACTCTTTAACAATC 65 31 CTACTGTTGCAGCTCTTGCTCTGTGAACAA 70 47 255 cysK cysZ cysteine synthase A Amino acid biosynthesis 1.D.3 Serine family [8] Cysteine metabolism. Selenoamino acid metabolism. Sulfur metabolism none EC:4.2.99.8 YPO2993 ATGTTCCAGCAAGAAGTTACTATTACTGCTCCAAA 69 37 TTACTCAAGCTCTGCCATCAGTTTTACCAGATG 70 42 258 ptsH hpr PTS system; phosphocarrier protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2994 TTTGGTAAAGCACTTCTACTGAAAGAAGATGAGA 67 35 CCAAATCCATCAATTCCTTCGCTGTTGGC 74 48 255 ptsI PTS sytem; enzyme I component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO2995 ATGGGTTTGTTCGATAAACTGAAATCATTGGTT 70 33 CTATTTCTTGATGCGGATAATAGGTGTCTCGC 70 44 510 crr gsr iex tgs treD PTS system; glucose-specific IIA component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] Glycolysis / Gluconeogenesis none EC:2.7.1.69 YPO2997 ATGCGCGGAAGATTATTCTGGAAAATCC 70 43 TCAGGCCTGCCACCGTGG 69 72 255 none putative two-component system sensor kinase Broad regulatory functions 2 Broad regulatory functions [235] none YPO2998 ATGAAAATTTTGTTAGTCGATGATGATCTTGAACT 67 29 TTATCGGATGCGATAGCCAATGCTACGTA 70 45 684 none putative two-component system responseregulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO2999 ATGCAACATGTTACTGGTTCAAAACGACGCCTTAT 74 40 TTACATCCCCATCGGTGGACCCATA 70 52 255 none putative HlyD family secretion protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3000 TTTGCTCCGGCTCGAAAATGTCAGT 70 48 TAACGCCCTAATGGGGTCCATCTCC 70 56 255 none putative ABC transporter; ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3001 ATGGGGAAAACAATTGTTATCGTCGGTG 70 43 ATTAGCCACGGTATAGCCATATTGAGACAGAATTC 69 40 255 none putative pyridine nucleotide-disulphideoxidoreductase Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO3002 ATGAATGCGCCATTAATTATAATATGTACATTCTT 65 26 AGCTTCTTGTTAAATATGAGATGAAGAAAGTAACG 65 31 255 none putative permease Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO3003 ATGAAATGGTATCATTCTCTCGTGT 60 36 TCATACTTCCTCCTTACTTATATTTGAATCC 61 32 198 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3004 ATGCGCGATTCTGCAAATAATAATAAAGAGAGG 69 36 TTAAAAGAAACTAAATCCCTGGGTAATTTACTCAA 65 29 255 none putative aminopeptidase (pseudogene) Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO3006 ATGGACTACAATTTTGATGAAGTCATCGATAGAAG 68 34 AAATCATCTACCGCGTATTTTAGTTGTATTAATGC 66 31 255 none putative aminotransferase Other 5.I Unknown [1066] Lysine biosynthesis. Aminophosphonate metabolism. Caprolactam degradation none EC:2.6.1.- YPO3007 ATGAATAATCGTGGCACTACTCTTCGAGTCTTG 70 42 TTACTTCTGCTGCTGTTTGACGTTGTAGTTCTG 70 42 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3008 AAAAGCCTGTTTCTTTTTACCTCTATCACGTTCTT 68 34 GTCTGTGGCCGCATCTTGCTTAATCGTCATA 74 48 255 none putative two-component sensor histidine kinase Broad regulatory functions 2 Broad regulatory functions [235] none YPO3009 ATGAAAATATTAATTGCCGAAGACAATGCCC 69 35 CTATTTTTCCAGGCTCTGCGCCGT 70 54 708 none putative two-component response regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO3010 ATTAGTGCTCAGGATATAGTTGAGATTGAATTTCT 65 31 TCAAACATAGGAAGGTATGAAGTTACTTTTTCTTT 65 29 255 none hypothetical protein Other 5.I Unknown [1066] none YPO3011 GTGACAACCCTGGAACACTGCATCG 70 56 AAAAACCCCAGTTGATAAATAGCGGTCACC 70 43 879 cysM cysteine synthase B Amino acid biosynthesis 1.D.3 Serine family [8] Cysteine metabolism. Selenoamino acid metabolism. Sulfur metabolism none EC:4.2.99.8 YPO3012 TTGAAATTAATAATATCAGTAAGTATTTTGGCCGG 66 29 TCAGGCGCTTTGGGCTAAAGCA 70 55 255 cysA sulfate transport ATP-binding protein Cell processes Transport/binding proteins 4.A.5 Anions [14] none YPO3013 ATGGTGGATGTTTCTGAATTTAACGGTGTTG 70 39 TCAATGCTCATGCTTTTGCTCCTGTTC 70 44 876 cysW sulfate transport system permease protein CysW Cell processes Transport/binding proteins 4.A.5 Anions [14] none YPO3014 ATGTTGTCGGCATCCAGTAAACGGG 70 52 TTAGTGCCCACCTATCCGCCGAC 70 61 834 cysT sulfate transport system permease protein CysT Cell processes Transport/binding proteins 4.A.5 Anions [14] none YPO3015 AAAAATGCGCGTAACGGATTGACCC 70 48 TTACTGATGCCCTTCTGCTAACAATTTATCCAGT 69 38 255 cysP thiosulfate-binding protein Cell processes Transport/binding proteins 4.A.5 Anions [14] none YPO3016 AGGTCCATCTCGTGAAGATAAACCATTATCGGGTG 74 46 TTATTTCTGTGTCACTACTCGCGCATGCT 70 45 255 nanT putative sugar transporter Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3017 GTGAAAACTGGTGCTCCCCGT 66 57 TCACCCATTTTGGCTAACCGC 66 52 none putative rpiR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3018 TTGACCTTTTTACCCGGTTTTC 61 41 TCACGCGGACACCTCAAGG 66 63 153 none hypothetical protein Other 5.I Unknown [1066] none YPO3019 ATGATCAGTGGATCCTTGGCACAACC 70 50 CTAGCTATTCAAAAGACTATAATGAACCTTCACGA 66 34 471 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3020 ATGGGAAAAGGGTTAGCACTGGATATCG 69 46 TCACAACGACGTTCTGGCCCAC 69 59 873 none putative sugar kinase Other 5.I Unknown [1066] Glycolysis / Gluconeogenesis. Fructose and mannose metabolism. Galactose metabolism. Starch and sucrose metabolism. Erythromycin biosynthesis none EC:2.7.1.2 YPO3021 ATGGGTTTAAATTGTTTTGGTATCAGTTTTTCATC 68 29 GGGGGCTACCAATTGATTATTGGCTAAGTT 69 43 567 none putative outer membrane protein (pseudogene) Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO3023 GTGAGCAATCTAAGCAATCTCCGCCA 70 50 TCAGTATTCGGTCAGTTTTTCTGTTTCACACTG 70 39 702 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3024 ATGAAAAAGTTAACCGGCCTGATCGC 69 46 TTACTGCAACGTAATAGCGTCACGCATTC 69 45 894 nanA npl probable N-acetylneuraminate lyase Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] Aminosugars metabolism none EC:4.1.3.3 YPO3025 ATGACTCAAGTTCAGAGTGGCATTCTGTTG 69 43 TTACAGAGATAATAAGGCCGTCAGTGAGGGTG 70 47 900 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3026 ATGAATATTCGCCCAAGGTTGTCTGGG 70 48 TTATTCGCTTTTTGCACGCCAAATAATCTTACT 70 33 612 yfeY putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3027 AAAAATTAACCCTGGCAGCAACGCTC 69 46 TTATTTAATCTTGGTGATATTTTTCACATCGATTT 65 23 414 ygiW putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3028 ACGCAAACGCCGATTCATGTATTGA 70 44 CAATAGCGACTTTGGCATAAGGGCG 69 52 255 none putative autotransporter Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3029 ATGAACTTAAAAAGTAAAATCTTTATTTTCTGG 61 21 CTACATCTTCCTGGCAATAAGCA 61 43 417 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3030 ATGTCTGGGGCTGATAATTTCC 61 45 TTATCCATGCGCATAGATAAGTAAAA 60 31 186 none hypothetical protein Other 5.I Unknown [1066] none YPO3031 ATGGAAATCCGCATATTTCAGCAAGACG 70 43 TCAATACTCCTGATCCACAATCAGCCTTTTG 70 42 426 none putative acetyltransferase Other 5.I Unknown [1066] none YPO3032 ATGAACTCACCCGATATAGCCCTAATCAAAACC 70 42 TTAGTGTGTTTCTCCTTTAATTGCTAACCAGTCTT 67 34 255 hemF coproporphyrinogen III oxidase; aerobic HemF Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] Porphyrin and chlorophyll metabolism none EC:1.3.3.3 YPO3033 ATGCAGATTTGGGTCGATGCGG 70 55 TTATTTTGCTTGGTTACGGGCTTGCTG 69 44 459 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3034 GTTGCTGCACCCTGTCTGGAAATTG 69 52 GCTGATACGTGCAGCCTCCATGTTC 69 56 255 maeB NADP-dependent malic enzyme Central intermediary metabolism 1.C.2 Gluconeogenesis [5] Pyruvate metabolism. Carbon fixation none EC:1.1.1.40 YPO3035 ATGATTATCAGGGCCAAAGAAGAGTCTATGTCTGT 70 40 CTAACACCGCTGTGGCGTCAAGG 69 61 624 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3036 AAAAACCCGGTTTTATCCGTCGGTTATG 70 43 CTAAAAACCAATAGGTACATCTTTCATATCCGGCA 70 37 603 napC cytochrome C-type protein NapC Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO3037 ATGAATAACACAATGCTTAAGTTAGTAAAGCGCAG 67 34 TTACTGACCAAAGCCAGGTGCTGGC 71 56 468 napB cytochrome C-type protein NapB precursor Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO3038 GTTAACCGTGGGCTGAACTGCATCA 70 52 AAAGCACGGTGCAATTCAGGTACCC 69 52 255 napA periplasmic nitrate reductase precursor Energy Metabolism Respiration 1.B.7.c Electron transport [33] Nitrogen metabolism none EC:1.7.99.4 YPO3039 ATGGACGATAACGAATGGCATGTTTGTG 70 43 TCATGGCATTTCCTCACCTTGCAAAT 70 42 267 napD conserved hypothetical protein Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO3040 ATGACTGATTTATCGCGGCGTAAATTGC 70 43 TTATCGTCCATCTTCACTCCGGGTAAGG 70 50 504 napF ferredoxin-type protein NapF Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO3041 ATGACGAAAAGTCACACTATTCTGATCGTTGAC 69 39 TTTTTATTTTCCAAATACATAATCGTCGCGGC 70 34 630 narP nitrate/nitrite response regulator protein NarP Broad regulatory functions 2 Broad regulatory functions [235] none YPO3042 ATGGAACTCAACCCAGTATTCGCCC 68 52 CTATTTAATGGCCGCTAAAATAAAATCATGGTTT 67 29 279 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3043 AACGAAGCGATGCAGCAGGTACAGA 70 52 CCGTCCACGGTCAACAAAATCATTG 70 48 255 none multidrug efflux protein Other 5.D Drug/analogue sensitivity [28] none YPO3044 ATGGCTAATATTTATGAGAGAAATATCCCTGAACG 67 34 TTATTTTTGGTTCTCTGAGTCAACACCCTTTAAGG 69 37 585 none hypothetical protein Other 5.I Unknown [1066] none YPO3045 ATGCCAACCATCATTACACATGCGG 70 48 TTAATTCCTCATACTGGTTTTTGCGCCAA 69 38 549 ybcI putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3046 ATGCATATCACGGCTAAACCAACCAGC 70 48 TTAATGCTGCTGTTGTGATTTTATTCCACATTC 69 33 255 none putative sulfatase modifier protein Central intermediary metabolism 1.C.5 Sulphur metabolism [13] none YPO3047 CTTCGATATCGGTCATCTTAGCTGCGGGC 74 55 TTAATTCATACCAAGCGATTGCTTAATTTTATT 65 24 255 ydeN putative sulfatase Central intermediary metabolism 1.C.5 Sulphur metabolism [13] none YPO3048 ATGATTGAATTATCGGTAGATAACCTGCATTTAAC 66 31 TTATAGCTTAGGAAAAATCCACAGATGTTCAGTCG 69 37 255 none probable ABC-transporter; ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3049 ATGAAAGCATTGCGCAGAAAATGGC 70 44 CGAGGCCTAACACCACCAGAAGGATATTGATAAA 72 44 255 none putative binding protein-dependent transportsystem; inner-membrane component Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3050 ATGTTAATGAAAATTAAAGTATTTATGTTCGCGA 65 24 CTATTTTGCTGCTGCGGTACGCCA 70 54 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3051 ATGAAACACTCCATCGACTCGCTAAAAGAG 68 43 TTAGCCAATACGATCGAGATCGGCG 70 52 474 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3052 ATGTCAGATCGCCCTGTAACGCCC 71 58 TTATTGCACCTCAGTAGCGGGTTGGTT 69 48 399 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3053 ATGATCTGTCCGGTAATCGAATTGGCC 71 48 TCATGCGATCAGTTGTTCCATGATTTTCT 69 38 255 dapE msgB succinyl-diaminopimelate desuccinylase Amino acid biosynthesis 1.D.2 Aspartate family [24] Lysine biosynthesis none EC:3.5.1.18 YPO3054 ATGACCGATAATACATTAACGCCGCAGA 69 43 AAAAATCATCGGCAAATGACTTGCCA 69 38 678 none putative carboxypeptidase Other 5.I Unknown [1066] none YPO3055 ATGCAATGGTTAGCTGATTACTGG 62 42 TTACTTTTTCTTATTTTGATCCGGC 61 32 195 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3056 GGATCAGGCGTTTGCTGATCCTCAG 70 56 CCGATGGTTTGGCAGACATGATCAT 69 48 255 none putative acetyltransferase Other 5.I Unknown [1066] none YPO3057 ATGGCCGCTCTTGATCCAACGTTATT 69 46 TTACGACTTGCCTATGACCAGTGAGAGCA 70 48 453 yeaL putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3058 ATGCGTTGGCAAGGTCGTCGT 69 57 CTAGTGACTAGCAAACGTGTTACAGCTATTAGGA 66 41 867 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3059 ATGCAAAAGCTAGCTGAGTTGTATCGTGGG 70 47 TTAGTCTAATTTTACGCCGATACGGTGCG 69 45 714 purC phosphoribosylaminoimidazole-succinocarboxamidesynthase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism none EC:6.3.2.6 YPO3061 ATGGCAATATCATTGCAAAAATCGACG 69 37 TTATTTTATCGCGGTTGCGCTAGTCTGG 70 46 255 dapX nlpB lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3062 ATGTTTACGGGAAGCCCAATGTTTACAGG 70 45 TTACAGCAAACCTGCGCTTTTCAACG 70 46 900 dapA dihydrodipicolinate synthase Amino acid biosynthesis 1.D.2 Aspartate family [24] Lysine biosynthesis none EC:4.2.1.52 YPO3063 ATGTTTACCATGGTAACCCCAAAGAGCATG 70 43 CTAACTCTCCATTCGGTCATCATGCTGTG 70 48 615 gcvR glycine cleavage system transcriptionalrepressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO3064 ATGAGCCCATTGAAAGCCGGTGATATAG 70 46 TTAGGCATTTTGGCGTAAGTAGTCCATCAC 69 43 471 bcp bacterioferritin comigratory protein Other 5.I Unknown [1066] none YPO3065 ATGAAGATTTTGAAAAGACTCATTTTTATT 60 20 TCACCTCAAACTGACTTTACTTAGAGTCA 62 38 420 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3066 TGAGTAAACGTGAAGATATTTTAGATACATCCAGA 65 31 CTAACTACTCAATTGAGTGATGATTCCAGCTTTCT 67 37 696 none hypothetical protein Other 5.I Unknown [1066] none YPO3067 ATGACGGTTTGCGGTGTACC 63 55 TCAACTCTGCAACAATATCAACTCG 63 40 174 none hypothetical protein Other 5.I Unknown [1066] none YPO3068 ATGCTAGAGCTGTTGTTACAATGGTATCGCC 69 45 TTAATCCGCGTCAGGAATGAATTCTTCTG 70 41 255 perM putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3069 TGACAAGTCGGTTAAGTAAGACAGTGATCGCCACA 74 46 TCAGGACTTCTGATATTTACGAAAACGCTCG 69 42 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3070 ATGAAAGATGTCACTATTTATCACAATCCACGCTG 70 37 TTATTTCAATATCTCAAGCACTTGCTCTGGTGG 70 39 357 yfgD putative arsenate reductase Other 5.D Drug/analogue sensitivity [28] none YPO3071 TTGTTGGTTGAGGTGCTTCTGAATACGC 70 46 AGAATTTCTTTAACAAATGGGATAGTAAGCTTACG 65 31 720 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3073 GATTTTTAATACACTGAGTCGCCAAAAAGAGGAAT 69 34 TTACTTGCGGCGCCATGTCGTG 72 59 255 cysS cysteinyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Cysteine metabolism. Aminoacyl-tRNA biosynthesis none EC:6.1.1.16 YPO3074 ATGGTCACGTTTCATACTAATCACGGCG 70 46 TTACTCGCTAATAGTGACGCTTTTGATGATCACAT 70 37 495 ppiB peptidyl-prolyl cis-trans isomerase B Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO3075 ATGAGCACGCTTTTTATTGCAGATCTGCATC 72 42 TTAAAACGGGAATGTAATTAGCTCGACGTTATCTG 70 37 723 none conserved hypothetical protein Other 5.I Unknown [1066] Starch and sucrose metabolism. Folate biosynthesis none EC:3.6.1.- YPO3076 ATGGGAGCCAACCTCAATTCAGCTTATG 70 46 TCATGCTTCTTCCCTCGGATCAGG 69 54 525 purE phosphoribosylaminoimidazole carboxylasecatalytic subunit PurE Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism none EC:4.1.1.21 YPO3077 ATGAAACCAGTTTGTGTACTGGGTAATGGC 69 43 TTATAACTTATCTTGCGCCCAACGCAGTG 70 45 255 purK phosphoribosylaminoimidazole carboxylase ATPasesubunit PurK Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism none EC:4.1.1.21 YPO3078 CGACATGTTGGATGTTGGCGATACC 70 52 ACGAAATAGCGCCTGCCCTCGTAAT 70 52 255 ybbP putative permease Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3079 ATGCCAGCGGAAAACGTTCTTGAAG 70 48 TCATGACTCCTCCCACAATTTACCGTC 68 48 687 ybbA putative ABC transporter ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3080 ATGATGAACTTCAAGAACGTTTTCCGCTG 70 41 TTATTTCGGATCAACAACTAACGGCTTGAGTT 69 37 639 tesA apeA pldC putative acyl-CoA thioesterase 1.H Fatty acid biosynthesis [33] Benzoate degradation none EC:3.1.2.- YPO3081 ATGCAAAAAGCAGTATTGATTACCGGCTGT 70 40 TTAACTATTACCGCGCAGGACTCTATCTAGCATC 69 44 777 ybbO probable short-chain dehydrogenase Other 5.I Unknown [1066] none YPO3082 ATGCTAACACCTACAACGATTGAAATTACTGAAGC 69 37 TCAGTACAATAATGCGTAGAGTTGGCGGC 70 48 870 ybbN putative thioredoxin Other 5.I Unknown [1066] none YPO3083 ATGTTCACAGTTATCCCTATTCTTATCGTTGTCGC 70 40 TTATTTACCTCGGCTGTTTTTACTCTCACCAATC 69 38 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3084 ATGCTGGAGGAAATTGCAGTAAATCCAAATT 69 35 CTAGCGATTAACGGCACGGACATGC 71 56 450 ybbJ putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3085 ATGAACATTAGCGATGTTGCGAAAAA 66 35 TTATTTTAATGGTAGCGAACTGCTTGAGTGGC 70 41 420 cueR putative regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3086 GGAAAGCCGTGAGGATGTTCACCAT 70 52 GGGTGATTTGATCCCGTTTCCAATG 69 48 255 ybaR putative cation-transporting ATPase Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO3087 ATGGACAAACTCTTACGCCGTATCGCA 70 48 TTATTGATTGTCGGCTCGTAACAGCTCTG 69 45 810 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3088 ATGTTTATTATGACACCTGCCGTTGTTCTACTGG 70 41 TCAATCCCGCTTGGCAATATCCG 70 52 489 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3089 ATGGGTTATGATGCACACAAGAATGATCTTAA 68 34 TTACACAAGTTCAATGACAGGCTCATCGG 70 45 240 none hypothetical protein Other 5.I Unknown [1066] none YPO3090 ATGCTGAAATTACTGACGCCATTTGAAGAG 69 40 CTACTGGTTATAAACGATCTCCCCCTTCAGCT 69 47 624 ushA UDP-sugar hydrolase (pseudogene) Central intermediary metabolism 1.C.3 Sugar nucleotides [11] Lipopolysaccharide biosynthesis none EC:3.6.1.45 YPO3093 ATGACCGATCGTTCTGATACCGGATGT 70 48 TTACTTATCGTCCAAATTAGGCAGTAAGGCCG 70 44 255 rosA fsr putative membrane efflux protein Other 5.D Drug/analogue sensitivity [28] none YPO3094 AACACCCTTAATCACCACTATTGTAGGAGGCCTGG 73 49 AACCGGCATTTTATCTTCTTCAGTCAGTGTTTCTA 70 37 255 rosB ybaL putative potassium antiporter Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO3095 ATGAAATTTCCTGGTAAGCGCAAGTCCAAACA 73 41 TTACCGTTCCCAATAAGACTCCTCGAGGCTAT 71 47 255 gsk inosine-guanosine kinase Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Purine metabolism none EC:2.7.1.73 YPO3096 ATGAGTAATAAACAGGCACGAAGTAACCTTGATAG 67 37 CTATTCCTTAGTTTGAGAGAGCTTAAGCCCCTCTT 69 43 255 wzz cld O-antigen chain length determinant Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3097 ATGCCAAAACTAACCTGTTTTAAAGCCTATGA 67 34 TAATAGAGAAAGTATCTCTGCTGTTTTATGATGCA 65 31 255 manB rfbK phosphomannomutase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Fructose and mannose metabolism none EC:5.4.2.8 YPO3098 TACTGCTACATATAATAGTGAGAGAACAATTTCGG 65 34 TTTAAAAACTGAGGAAGTTTAGATAAGTTTTTGCA 65 26 744 wbyL probable glycosyltransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3099 TCCCGAGCTCTTTATCCTAAACAA 62 42 TAAATCATCGATTCGTTCCACATC 62 36 1407 "manC, rfbM" mannose-1-phosphate guanylyltransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Fructose and mannose metabolism manCrfbM EC:2.7.7.22 YPO3100 ATGATCGAGTGCAATATTATTCACGCGGC 72 45 CTATTTTCTGAAGTTATTCTGATGAGCCAAGAACC 68 37 714 fcL wbcJ GDP-L-fucose synthetase (pseudogene) Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3102 GTGAAACAACGCCATTCTATCCGCG 71 52 TTAATTCTCCAACGAAATGGATACGTCAAAACC 70 36 687 gmd probable GDP-mannose 4;6-dehydratase(pseudogene) Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Fructose and mannose metabolism none EC:4.2.1.47 YPO3104 ATGATGGAATAATTAATTCATTGCAAAATATGGGA 68 26 TAAACATCTAAGGTTTCTTGATAACACTTATCCCA 66 31 255 wbyK putative mannosyltransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3105 ATGAATAAGACTATCTCACTATATATTTCTCTATA 56 23 TTATTTTATGGCAACTGATTTAATTTTCA 61 21 1222 wzy putative O-unit polymerase protein (pseudogene) Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3107 GTGATATTAAGAAAGTTTTTTATTATTTGTGATAC 59 20 TCATTTATAGCTCATAGTTTTATTAAGAACCG 62 28 1143 wbyJ putative mannosyltransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3108 ATGAAAAGTAATATTATAATTGATAATAGTAACTC 56 17 TTAACAACTCAATCGCTTAAGAATACC 60 33 922 wbyI putative glycosyltransferase (pseudogene) Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3110 ATGAAAATAAGTTCTCAAATGGTATGGG 63 32 TCACCTATCCTCTATATTATTTTTAATGAATTC 60 24 1344 wzx putative O-unit flippase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3111 TGGATATGAAATTTTGTAAAAACCGTTATATCAAT 65 23 TGAACTATATCCACTAAGAAAACTCTGGTTACTCC 65 37 255 wbyH putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3112 ATGAAAATTCTTATTACCGGCGTTAGCGGTTA 69 37 TCAGACCCGCATTCTGTTTAGTGTATCTTTAATTG 69 37 858 prt rfbS paratose synthase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3113 ATGAGTCAAGAAGAATTACGTCAACAGATTGCTG 70 38 TTAAAAATTCAAACCAAAGAACTCTTCAAACTTAC 65 26 255 ddhC putativeCDP-4-keto-6-deoxy-D-glucose-3-dehydratase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3114 ATGGTTGCAAACCATGGGGGC 70 57 AATTTCAGTAATACTGTATTCATGCATATCTGTGC 65 31 255 ddhB ascB rfbG CDP-D-glucose-4;6-dehydratase (pseudogene) Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Starch and sucrose metabolism none EC:4.2.1.45 YPO3115 GTGAAAGCAGTCATTTTGGCCGGA 70 50 TTATTCCCATACCTTCCAAGGTGCCCT 69 48 774 ddhA rfbF glucose-1-phosphate cytidylyltransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Starch and sucrose metabolism. Nucleotide sugars metabolism none EC:2.7.7.33 YPO3116 ATGTCATTAAATGTTAAGCTGCATCCATCAGGT 69 36 TTATTTTGATGGCACAAAGGCATCAGAGA 69 38 255 ddhD ascD rfbI cdp-6-deoxy-delta-3;4-glucoseen reductase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3117 ATGATGCAAAGCAAACCCGGCGTAT 71 48 ATATATTATGTCGAATTAACTGTTCTAACAGGGCA 65 31 255 hemH popA visA ferrochelatase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] Porphyrin and chlorophyll metabolism none EC:4.99.1.1 YPO3118 ATGCGTATCATTCTGCTGGGCGC 71 57 TTAACCGAGAATAGTCGCCAGTTCAGCA 70 46 645 adk plsA dnaW adenylate kinase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism none EC:2.7.4.3 YPO3119 ACTCGCTTTATTCCAATAAAGAAATTTTTCTGCG 69 32 CTCCGCGAGCAGCGCCTGATC 73 71 255 htpG heat shock protein HtpG Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO3120 ATGCAAACCAGTCCACTCCTGGAGTC 69 54 TCAGTACTTGATGGGATTACGCCCTGC 70 52 606 recR recombination protein RecR Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO3121 ATGTTTGGTAAAGGCGGTATTGGCAATTTAA 69 35 TCAGAACGGCATCTTAAAGCCTGGTG 69 50 333 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3122 GCTGGCTAATGGCCTTTCATTAGGGCG 73 56 TTATTATCCGCAATAATTGACTGACGTGCTTGTGC 73 40 255 dnaX dnaZ dnaZX DNA polymerase III subunit Tau (contains DNApolymerase III subunit Gamma) Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] DNA polymerase none EC:2.7.7.7 YPO3123 ATGACCGTTTCTGCATCTAAGACAGCACA 70 45 TCAATGACCGTCGAAAGAAACGAGG 69 48 564 apt adenine phosphoribosyltransferase Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Purine metabolism none EC:2.4.2.7 YPO3126 ATGTCTCGCTGGTTATTAATAGCTCTGGGGT 69 45 TTACACCAGCCAGAGTGAAACAGCAAAAGT 70 43 279 ybaN putative exported protein (pseudogene) Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3127 TGAGTACAGAAAAATTATTACAGGTGCTAGAGAGC 66 37 TTTTTCTCAATACTGCGCTCTATTCTTATCAGTGC 69 37 537 priC primosomal replication protein n'' Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO3128 ATGTCAGTTGAACAAGCACCAC 60 45 TCAGTCTGATTCTTTATGGCGAA 61 39 156 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3129 TTGCGCCAATTGGAATCACGTCTTA 70 44 GTGGTCAAGCGCAATGATTGTTGGT 69 48 255 kefA aefA putative potassium efflux system Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO3130 ATGCATTCGCTGGTCATTATTGCTAATGG 70 41 TCAGAACGTCAGGACTTTTTCCGCG 71 52 354 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3131 ATGGCACGAAAAACCAAACAGAAAGCC 71 44 TTAATCCGATACTCTGCTATTCATCTCGTTTCGT 69 38 657 acrR putative tetR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3132 ATGCCTCTGGCTGCAATTCTGGTACTTT 70 46 TTAAGACTTCTTCGCTGTATCAGCCGGG 70 50 255 acrA mtcA multidrug efflux protein Other 5.D Drug/analogue sensitivity [28] none YPO3133 AAAGACCCCATCAGCCGTACACCAG 70 56 CAGAATCTCCATTGATGGCAACCCA 69 48 255 acrB acrE multidrug efflux protein Other 5.D Drug/analogue sensitivity [28] none YPO3134 ATGAAGCCCAATATCCACCCTCCGT 70 52 TTAGTTGGTTTTCTTTGTTAAGAAACTACCGAAAC 66 31 261 ykgM putative ribosomal protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO3135 ATGCAAGTATTAAGTTCATTACGTTCGGCAAAGA 70 35 TTTTTATGGGTTCCTCCCTGAACCGC 71 50 144 none putative ribosomal protein L36 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO3136 ATGAACAATGAAATAGTTGGTGACTTC 61 33 TTACAATTCATCCGCAGGAGA 61 43 354 none hypothetical protein Other 5.I Unknown [1066] none YPO3137 ATGGATGAGTACTCGCCTAAGCGGC 69 56 TTAAGTTTTCATCAGGGTACATACGTATTCCC 66 37 369 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3138 ATGACAAAAACTGACTACCTGATGCGTTTAAGAAA 69 34 CTATTTCACATGTTGCCATACAGTAGGTGGAATTT 69 37 204 ymoA ffs modulating protein YmoA (histone-like protein) Broad regulatory functions 2 Broad regulatory functions [235] none YPO3139 GTGAGCGACAACATTGCGGTGAG 69 57 CTAGCTGTATCGCCAGCGATATTGCTGCA 73 52 456 none putative 6-O-methylguanine DNA methyltransferasefamily protein Other 5.I Unknown [1066] none YPO3140 ATGAAACCTTGGCAGCCAAAGGC 69 52 TTACTGTATCGTGGCAGCGGCAGG 71 58 522 ybaY putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3141 ATGAGTCAGGCATTAGAAAAACTGCTCGATCT 69 41 TCAACGATGTAAACGAATCACACCCTCC 70 46 861 tesB acyl-CoA thioesterase II 1.H Fatty acid biosynthesis [33] Benzoate degradation none EC:3.1.2.- YPO3142 AAAAACTTTTATCCGTGTTGGGCCTGG 69 44 TTATTGATTATATGCGTTTTCACCGTGACTGTTAA 69 31 255 amtB probable ammonium transporter Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO3143 ATGAAGCTGGTTACCGTGGTGATAAAACCAT 70 42 TTACAGCGCTGCTTCGTCTGTTTCG 70 52 339 glnK nitrogen regulatory protein P-II Broad regulatory functions 2 Broad regulatory functions [235] none YPO3144 CAGTGCTTTTGATACTCAGCCTGT 62 44 ATCTTCGCTGACTAACTGCAACTG 62 46 ~1400 "mdlB, mdl" probable ATP transporter (ATP-binding protein) Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3145 GGTATTTTCGCCGTGAATGGCACCGTTAT 73 48 GTCATCCAATGCGGCTTCTAATTGCTGATAGC 73 47 255 mdlA mdl probable ABC transporter (ATP-binding protein) Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3146 ATGCTAGATAAAACAGATCGTAAACTACTGCGT 65 36 TCACTCCGGGACTGGCAGCA 69 65 462 none probable AsnC-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3147 ATGACCAATACATGGGTGAAAAATGCTATCAA 69 34 CTACAGATTATTCAATTCATTGGTAAATGGTGTT 65 29 255 none putative Pyridoxal-phosphate dependent protein Other 5.I Unknown [1066] Cysteine metabolism. Selenoamino acid metabolism. Sulfur metabolism none EC:4.2.99.8 YPO3148 ATGTACCGTTTAGCCGCTTTTGATATGGA 69 41 TCAGAATTCGGGGGAATAGGTGAGGT 69 50 822 none putative haloacid dehalogenase-like hydrolase Other 5.I Unknown [1066] none YPO3149 GAGCGTTTATATCAAAAATTTGGTGACCACCCGG 75 44 CCAACCATATGCCGTTAATGTAACCCCATTGATG 74 44 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3150 ATGAAACGTGCCGTAGTTGTCTTTAGTGGTG 70 45 TCAGGCTAACCCCACCTTTTGCTTTAGG 70 50 699 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3151 ATGCACACCCATATTAAAGTCCGGGG 69 50 TCAAGCTCCCCGATTGACTAGCTCCT 69 54 408 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3152 ATGAAATTTTTAGGAAAATTATTCGCCATAACCGT 69 29 TCACAATTTAATCTTGCCGTTATTTCGCTCC 70 39 447 ybaV putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3153 CCTTTATCCTGACTGGGGTTGGCAGCTATTTGAT 74 47 GCATCAAATATCATGCTAACGGACTCTTCCTGCAT 74 43 255 ppiD peptidyl-prolyl cis-trans isomerase D Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO3154 GTGAATAAGTCACAACTGATAGACAAAATTGCCG 69 38 TCAGTTTACTGCATCTTTCAGGCCTTTACC 68 43 273 hupB hopD DNA-binding protein HU-beta Other 5.F Adaptions and atypical conditions [36] none YPO3155 CTGGCGGAAGCTAAACTAAGAGAG 62 50 TCGTTAAATGCAACGTTTTGTTCT 62 32 ~1400 "lon, capR, deg, muc, lopA" ATP-dependent protease La Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO3156 GACAGATAAGCGCAAAGACGGTTCAGGAAAGC 74 50 AGAAGCTTGCGCTTCGGGCTGACC 74 62 255 clpX lopC ATP-dependent Clp protease ATP-binding subunitClpX Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO3157 ATGTCATACAGTGGCGAACGAGATCAATTT 69 40 TTAGTCACGGCGGGTGAATACGGA 70 54 624 clpP lopP ATP-dependent Clp protease proteolytic subunitClpP Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO3158 ATGCAAGTTTCTGTTGAAACCACTCAAGG 68 41 TTACGCTGCAGTGGTCTGATTCATCAG 69 48 255 tig Trigger factor Cell processes 4.C Cell division [24] none YPO3159 TTGCCGAGGGAACGACTCA 65 58 TCAGGAATGATGCGAACTCTG 61 48 204 none hypothetical protein Other 5.I Unknown [1066] none YPO3160 ATGATTTTGATTCGGGAACAAATTGAAGAAAAA 70 27 TTAAGCCAGTGTATTGGCACCACGACA 70 48 321 bolA BolA protein Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO3161 ATGCTAAAGAAAATTCTTTTCCCGCTGTTG 69 37 TTAGCGTGCATTTTGTTTGATGAAACTACTGAC 69 36 579 yajG putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3162 ATGCCCAATCGCTATTCAAACCTTTTTACC 70 40 CTAGGCTAGTTTTTGCCGTCTGAGCGC 71 56 255 ampG Beta-lactamase induction signal transducer AmpG Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO3163 ATGCGTAAAATTCTTATCGGCACTGCAG 69 43 ATTGAGTAAACGATACCATCTTGTAAAAAGTCTTC 65 31 768 yfeN putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3164 ACATTAAAAATATGGGAATATTGTCTTTATTTGCA 65 23 TTATTCCTCGGCTCCGGCGTG 70 62 255 cyoA cytochrome O ubiquinol oxidase subunit II Energy Metabolism Respiration 1.B.7.a Aerobic [20] Oxidative phosphorylation none EC:1.10.3.- YPO3165 CCAATCATAATGGTGACCGTTGCCGCAATTATTAT 74 40 ACATAGTAATCTACATCCTCGTCGAAGCTTTTCAC 69 40 255 cyoB cytochrome O ubiquinol oxidase subunit I Energy Metabolism Respiration 1.B.7.a Aerobic [20] Oxidative phosphorylation none EC:1.10.3.- YPO3166 ATGTCAACTGAAACTCTGACTAACCACAACGTAGC 70 43 TTATATGGCTCCTAACAGATAGACTACGGTGAA 66 39 615 cyoC cytochrome O ubiquinol oxidase subunit III Energy Metabolism Respiration 1.B.7.a Aerobic [20] Oxidative phosphorylation none EC:1.10.3.- YPO3167 ATGAGTCATTCAACAACTACTCACGGTGGAG 69 45 TCAGTCAACCATCATATTGATGTTGAGGTTGTAC 69 38 333 cyoD cytochrome O ubiquinol oxidase subunit CyoD Energy Metabolism Respiration 1.B.7.a Aerobic [20] Oxidative phosphorylation none YPO3168 ATGATTAAGCAATACCTGCAAGTCACTAAGCCA 69 39 CTATCCAGCGTAAGTCAGGAGTACTGCCG 70 55 888 cyoE protoheme IX farnesyltransferase Energy Metabolism Respiration 1.B.7.a Aerobic [20] Oxidative phosphorylation none EC:2.5.1.- YPO3169 CGCTAGAGCTTCGAGCTACCTGGGGGCTA 74 62 TTAAGCCGCATTGATCAACTGTTCCAGT 69 43 255 yajR putative transporter Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3170 ATGCCATCTTTCGACATTGTTTCTGAAATTG 70 35 TCAGTCACGGAAGTTATTGAACTGGAAGGG 71 47 492 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3171 ATGAAAATTACTGTGCTTGGTTGTGGAGCTC 70 42 CTACCAGGAGCCAGGCAAACCAGC 70 62 255 apbA panE 2-dehydropantoate 2-reductase Purines; Pyrimidines; nucleosides; nucleotides 1.F.2 Pyrimidine ribonucleotide biosynthesis [8] Pantothenate and CoA biosynthesis none EC:1.1.1.169 YPO3172 ATGAGCGTATCGGCGCTGGTTT 68 55 TCATTCCCGATAATTATAAATTCCTGGCGG 70 40 591 thiJ 4-methyl-5(B-hydroxyethyl)-thiazol monophosphatebiosynthesis enzyme Biosynthesis of cofactors; prosthetic groups and carriers 1.G.8 Thiamine [11] none YPO3173 CATCAAGAGTCAATCTGTGCGATTGCGC 73 50 TTCACGTTGGTATACCCCTGCTCACGCAAATA 74 47 255 thiI thiamine biosynthesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.8 Thiamine [11] none YPO3174 ATGTCACGTCATAGCATTCCAG 60 45 TTATATGATGTGCCACTGCGTACT 61 42 171 none hypothetical protein Other 5.I Unknown [1066] none YPO3175 ATGTTACGTTCCATAGAAAACATTGAGTCGACG 70 39 CTACTCAGTATCTGGGGTAAAAGGTTTCAACGG 69 45 294 xseB exodeoxyribonuclease VII small subunit Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO3176 ATGTCGGATACCCATGCACCTGTTG 69 52 TTAATTATTACGCTCAATAATGAAACGAGCTAATG 66 29 255 ispA geranyltranstransferase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] Sterol biosynthesis. Terpenoid biosynthesis none EC:2.5.1.10 YPO3177 CAGAAGAACTGCGCATGCTGCCAAAAG 73 52 GCATCTAAACCGAGTTCAGATCGCATTTCGTCT 74 45 255 dxs b0420 1-deoxy-D-xylulose 5-phosphate synthase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.10 Thioredoxin [10] Citrate cycle (TCA cycle). Glyoxylate and dicarboxylate metabolism none EC:4.1.3.7 YPO3179 ATGGATGAAGCCAAGCGCCGT 70 57 TTACAGCGGCCAATAGTGCCCAATC 70 52 486 pgpA phosphatidylglycerophosphatase A Macromolecule metabolism Synthesis and modification of macromolecules 3.A.11 Phospholipids [9] Glycerolipid metabolism none EC:3.1.3.27 YPO3180 ATGGCATGTGGCGAATTTGACCTC 70 50 TCATCCATGAGATTTACCTGTTGAGAAATGATCA 70 35 255 thiL thiamine-monophosphate kinase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.8 Thiamine [11] Thiamine metabolism none EC:2.7.4.16 YPO3181 GTGAAACCTGCTGCTCGTCGCC 70 64 TTATTTTCTCTTACGTACCGTCGGAGCGAC 69 47 417 nusB ssyB N utilization substance protein B Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO3182 ATGAACGTTATCGAAGGTGTTGTTGCTACTCC 70 44 TCAGCCTTTAATAGCTTTGATTACATTAATCATTT 65 26 471 ribH ribE 6;7-dimethyl-8-ribityllumazine synthase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.9 Riboflavin [6] Riboflavin metabolism none EC:2.5.1.9 YPO3183 ATGCAGCCCGATGAGTTCTATATGGC 68 50 TTAATACTTTGGCTTCAAGCGTAAACGCAAGT 69 37 255 ribD ribG riboflavin biosynthesis protein RibD [includes:diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.9 Riboflavin [6] Riboflavin metabolism none includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193 YPO3184 ATGGTGGGTAATTTAGTGATGGAAGCGC 69 46 TTAATCCTGCAAGCGCGCAATTTCT 70 44 132 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3185 ATGGAAGGTATCTATATTGGATTCACTCAGCGAAC 70 40 TCAGCCATCGAATGTGTGCTTGG 69 52 594 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3186 ATGACTGTTAGTTATGTCGGGCG 62 48 TTATTCGTCCAGACTTATCACCG 60 43 696 none hypothetical protein Other 5.I Unknown [1066] none YPO3188 GTGGCACAGGATTATACTGTTGAACAACTAAACT 67 38 TCACGGCAGTATTGAAGGTTGGTCAG 69 50 255 secF protein-export membrane protein SecF Cell processes Transport/binding proteins 4.A.6 Other [104] Protein export none includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193 YPO3189 GTGATCTTCGTCGGTCTGCTATATGCGCTTC 73 52 AGTACCGACTATTGCGGTGAACATTGACGTTACAA 73 43 255 secD protein-export membrane protein SecD Cell processes Transport/binding proteins 4.A.6 Other [104] Protein export none includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193 YPO3190 TTTTTCATTTCTGATGCTGTCGCATCTG 69 39 TTACAGAGCCTTCATTGTACCTTTCGGTAACAC 69 42 336 yajC putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] Protein export none YPO3191 AAAAACGGATGGGCGCGCC 71 63 TCAAACGTTTAATGGTGGAACTGGCTTC 69 43 255 tgt queuine tRNA-ribosyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] none YPO3192 ATGAAGTGGAAAGCCATGCGTGTTG 70 48 TTACGGGCTAACCTTCTCTTGCGGTG 70 54 255 queA S-adenosylmethionine:tRNAribosyltransferase-isomerase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] none YPO3193 GTGGTGATTTGCATTATACTTCCCAGCATG 70 43 CTAAATCTGCTTATGTTGTGCCTGTCGCAT 70 43 609 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3194 ATGGTTCTGGTAACTCGTCAAGCCCC 69 54 TTACAGCTTAGATGCGTTCTCAGACAGGTATTTAG 68 40 603 ahpC putative alkyl hydroperoxide reductase subunitc Cell processes 4.G Detoxification [10] none YPO3196 GTGAGACTCATTAATTTTTTGTTAAATAGCA 61 26 TCACTTCGATTCATCATACCTTACTTC 61 37 132 none hypothetical protein Other 5.I Unknown [1066] none YPO3198 ATGTTTTTAACAAAATGGAATAAGCCATTAGCAGT 67 29 CCCCCGCCAATATTGCCACA 70 60 255 ggt gamma-glutamyltranspeptidase precursor(pseudogene) Biosynthesis of cofactors; prosthetic groups and carriers 1.G.10 Thioredoxin [10] Taurine and hypotaurine metabolism. Selenoamino acid metabolism. Cyanoamino acid metabolism. Glutathione metabolism. Prostaglandin and leukotriene metabolism YPO3197 EC:2.3.2.2 YPO3199 ATGGGCACAGCGAAAAGAACA 65 48 TTACCACGGTAATGAATGCCC 62 48 none probable short-chain dehydrogenase Other 5.I Unknown [1066] none YPO3200 CATATCACGCTCTGGTTGCAAGGTGATAGTTTACC 73 46 CATGTTTACCCCAGTCTCACTGACAGCCAGG 74 55 255 malZ putative maltodextrin glucosidase Degradation 1.A.1 Carbon compounds [66] Galactose metabolism. Starch and sucrose metabolism none EC:3.2.1.20 YPO3201 AAAATAAGCTTAAACGTGGCCTGACGACACGTCAT 74 43 TTAATCAGCATTCTTGATCAGCGTAGCCTG 70 43 255 proY probable proline-specific permease Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3202 ATGAGTCATCGTTTATCATCTAAAGATATTATGGC 65 31 CTATTGTTTAACCACAATTTTCTGGCGACAGA 69 37 255 brnQ branched-chain amino acid transport system IIcarrier protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3203 ATGAAATGGGGAAAACTGGCGCTC 69 50 TTAGTCAGTAAAACCCAATGTTTTTCGGGTGTTA 69 35 255 pstS phosphate binding protein Cell processes Transport/binding proteins 4.A.5 Anions [14] none YPO3204 GTGTTAGAACGCTTATCATGGAAAACGCTG 69 43 TTAAGATTTGACTGCATTCTCGACTAAAACAGTTG 68 34 255 phoR nmpB phosphate regulon sensor protein PhoR Broad regulatory functions 2 Broad regulatory functions [235] none YPO3205 ATGATGGCAAGACGCATACTGGTGG 69 52 TCAGTAGCGCGTTGAGAAACGGTATCC 70 52 693 phoB phosphate regulon transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3206 ATGCGTATTATTCATACCTCTGACTGGCATTTG 70 39 TCATTGGGCTGGCTCCTCCG 70 65 255 sbcD exonuclease SbcD Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO3207 ATACTGCAGAATCACTGGCAGAAG 62 46 TGTATTTGTTGTGCTAAAGGCGAT 62 38 ~1400 sbcC exonuclease SbcC (pseudogene) Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO3211 ATGCGCATTGGTATAGATCTGGGTGGTAC 69 48 TCAAGGACGAAGGGTATTCCATAGCCA 69 48 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3212 ATGCTGTGGTTTAAGAATTTAATGGTTTACCGTTT 69 31 TCAGTGTTGTGCTTCGCCGCC 71 62 255 rdgC recombination associated protein RdgC Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO3213 ATGCTGAAATTTAATGAGTATTTTACCGGGAAAGT 68 31 TTAGCTCAAATATTTGCACAAATATGAAGATGCTT 68 29 288 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3214 ATGTTTTTTATTTTATGTTATATCGTTAATCAGC 61 21 TCACTGATTATTATGACGAAATGGG 61 36 171 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3215 ATGACACAAACTATCTTCATGGTAGGCGC 68 45 TTATTTGACCATCTCACCAGTCAACATCTGTAAAA 69 34 525 aroL shikimate kinase II Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:2.7.1.71 YPO3216 ATGCTAAACATTGTCCGGCGTAATTTTAAAAGTC 70 35 TTAATTGGGGTGACAAATATAAACCAGCGC 69 40 558 none putative methyltransferase Other 5.I Unknown [1066] none YPO3217 ATGATAGGTACTGATGTTGGCATTG 61 40 TTACGACAGTCTCATTTTAGCAGCA 62 40 216 none hypothetical protein Other 5.I Unknown [1066] none YPO3218 AAAAACGGTCATTGCTTCACATTCTCTGG 70 41 CTAGTCTCTTACTGCCACAATCATCATGATATCAC 68 40 639 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3219 ATGGAGGGCAGTGTTATGGG 62 55 TTAAACGGTTTTATCTTCCTCAATCTG 62 33 270 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3220 ATGGGGCCAGTGAGCGAAACG 70 62 CTACAGGCCTTCCTGAAATTTCCTCGC 70 52 759 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3221 ATGAACCTGTTAGAACATATGGGAAAAGCGG 70 42 TCAGCTACGAACTAAATCGTCGCCGTAAC 70 48 255 proA gamma-glutamyl phosphate reductase Amino acid biosynthesis 1.D.1 Glutamate family [19] Urea cycle and metabolism of amino groups. Porphyrin and chlorophyll metabolism none EC:1.2.1.41 YPO3222 ATGAGTGGCAGCCAGACATTGGTTG 70 52 TTAGCTGACAATCATATCATCACGATGAACAGC 70 39 255 proB glutamate 5-kinase Amino acid biosynthesis 1.D.1 Glutamate family [19] Urea cycle and metabolism of amino groups none EC:2.7.2.11 YPO3223 ATGACGTTAACCAGTGCTCATCCTAAAAGTAAGCT 69 40 TCAAGCAGATAACTTAACAGGCTGATCGTTAAAA 69 35 402 crl curlin genes regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3224 GGAGGCTACTGTTACCATGGCACAAGCCAAC 74 55 TAACGCATTTTATCTTCTAACCATTCGCTGGTTTG 72 37 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3225 ATGAACGAAAAATACGTCGTTACCTGGGATATG 70 39 TTATTTGCCGCTGAGGGGCG 69 60 459 gpt gpp gxu xanthine-guanine phosphoribosyltransferase Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Purine metabolism none EC:2.4.2.22 YPO3226 ATGCAACTCAAAATCCCCG 61 47 TTATCGACGTTTTTTTATAAAATAGGATTG 61 23 306 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3227 ATGAAATTACATTTCAATGCACAACTACATCGAAA 69 29 GTGTTCTTACTGTCCGCAACCATGGACGAGAAT 74 48 255 none putative carbohydrate-binding protein Macromolecule metabolism Degradation of macromolecules 3.B.4 Polysaccharides [13] none YPO3228 TTGCTTTTACTATCTAAAAGTTTAAGGTATTTCA 62 24 TCAGAGATGACTATCACCCAACAA 61 42 912 none putative LysR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3229 GTGTCGCCTTTTCAAATTTCTATTC 61 36 CTAAAGATAGCAATAGGTATATGAGTTGAGTTG 61 33 156 none hypothetical protein Other 5.I Unknown [1066] none YPO3230 GTGTCTGAACTGTCTCAACTTTCGCCTCA 70 48 TTATGTACGTTCAGGTATCGCTTTCAGCAGG 70 45 255 pepD pepH aminoacyl-histidine dipeptidase Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] Alanine and aspartate metabolism. Arginine and proline metabolism. Histidine metabolism. beta-Alanine metabolism none EC:3.4.13.3 YPO3231 ATGCGAAAAATTATTCATGTCGATATGGATTG 69 31 CTAGCCCCAATCAAGCAATAATTGCCG 71 48 255 dinP DNA-damage-inducible protein P Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO3232 TGCGAAATTATATAATGACTAGCCTACTTTTATCG 65 31 TTCACTCTTACTGATTATTTCTTTAAACTGTGCTG 65 31 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3233 ATGTTGACTGTCTTTATCGCATCC 62 42 TTATAGAATGCGAAACTGATCTAGCTT 60 33 228 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3234 GTGGTTGGGGCGATTGTGCG 71 65 ATGTTTTACTTGTAGATAGGGTTTAAATGCATCTG 65 31 255 apbE thiamine biosynthesis lipoprotein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.8 Thiamine [11] none YPO3235 ATGGAAATAATTCTGGGCGTAGTTATGTTCACC 69 39 TCAGCCACCGAAATCATCAAGCATAATATTT 69 35 255 nqrF nqr6 NADH-uniquinone oxidoreductase subunit F Energy Metabolism Respiration 1.B.7.c Electron transport [33] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO3236 ATGGAACATTATATCAGTCTGTTGGTCCGC 69 43 TTATAGGTTCACACCGGCGAAAGACATAAAAC 70 41 597 nqrE nqr5 Na+-translocating NADH-quinone reductase subunitE Energy Metabolism Respiration 1.B.7.c Electron transport [33] "Ubiquinone biosynthesis. 1,4-Dichlorobenzene degradation" none EC:1.6.5.- YPO3237 ATGGCTGATAGCAAAGAGATTAAACGGGTCTT 70 41 TTACTCCTTCTCAATCTGCGCAGGTTTC 69 46 630 nqrD nqr4 Na+-translocating NADH-quinone reductase subunitD Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO3238 GTGGCGAGTGATAAACCAAGAAATAATGACAG 69 41 TTTTTAACGCTCCTTCGCGCACTTTT 69 42 801 nqrC nqr3 Na+-translocating NADH-quinone reductase subunitC Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO3239 ATGGGCCTGAAAAATTTTCTTGAGAAAATCG 70 35 TCACTCGCCACGGGCTTTCC 70 65 255 nqrB nqr2 NADH-ubiquinone oxidoreductase subunit B Energy Metabolism Respiration 1.B.7.c Electron transport [33] Ubiquinone biosynthesis. Oxidative phosphorylation none EC:1.6.5.3 YPO3240 AGTCGTTTAAACCTATGATTAAAATAAAGAAAGGG 65 29 CTGCTCAATCTGGGTCAGTATGTCGCGC 74 57 255 nqrA nqr1 NADH-ubiquinone oxidoreductase subunit A Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO3241 ATGGGCAAAATCGCGCTGTTATTTG 70 44 TTATTCTGTCTTGGTGAGCGGGTCG 69 52 741 yafK putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3242 ATGTGCGAATTGCTTGGGATGAGC 70 50 CTAATTAAAACCGACCCGCTCACCAAGA 70 46 774 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3243 ATGTACCACGATTTAATCCGTAGTGAATTGAACG 70 38 TCAGGCTTTTACCATCTCTTTTTCGATCAACT 69 37 582 lpcA gmhA tfrA phosphoheptose isomerase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3244 GAAAAAGAAGCGATCGATGCAGGGA 70 48 TAAAGGGCAGGCTCTTACCCGCTTC 69 56 255 yafH probable acyl-CoA dehydrogenase Degradation 1.A Degradation [18] Sterol biosynthesis. Bile acid biosynthesis. Phenylalanine metabolism. Sphingoglycolipid metabolism.áTerpenoid biosynthesis none EC:1.3.99.- YPO3245 ATGCTGAAATGGCAGGCCACAACT 69 50 TCACGAGGAGCTTACATCAGTAAGTGGCTG 70 50 747 none hypothetical protein Other 5.I Unknown [1066] none YPO3246 ATTAACACCCGTGGTAGAGGCACCAGTTGTGTTTT 74 46 ACGATCTGCCCGAATTGCTCGGGTTTAC 74 54 255 hmwC putative accessory processing protein Cell processes 4.I Pathogenicity [38] none YPO3247 TGGTTTAGGGGAAATGGTGGGATGA 69 48 TGCCATTGAGCGTAGCGTTATCCAG 69 52 255 hmwA putative adhesin Cell processes 4.I Pathogenicity [38] none YPO3248 CCATGGCATGTTATGGTTCCCATTAAAATTCAGTT 73 37 ACATCTTATAAGCACTCAACCAGAGCTGATCGTTA 70 40 255 hxuB putative surface-exposed protein Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO3249 ATGAGCGTAACCCTACCGGATATCGAGG 70 54 CTAACACCGCTGCGGCGTCAA 70 62 255 none putative amino acid hydrolase Degradation 1.A.2 Amino acids [23] none YPO3250 ATGTCAGAGATAAACCCTAATCCCTTGTTCAGG 69 42 TCATCCGTCGTTGACACCGTGTAAG 69 52 255 none putative amino acid transaminase (pseudogene) Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3254 ATGCCATTGATCACCATTAATCAGGTTCAA 70 37 TCAGGCAGGGCCAGATAAACCG 69 59 747 none putative amino acid ABC transporter; ATP-bindingprotein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3255 ATGACATTTACTGACTGGGATATCATCCGC 69 43 TTAATGGTGATCAATGGCATGGAATTTCTTC 70 35 654 none putative amino acid ABC transporter; permeaseprotein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3256 ATGACCTATCAGCTAAATTTTGCTGCTCTGTGG 71 42 TCATGAGGCATGGCTCCCAAAGTATC 69 50 669 none putative amino acid ABC transporter; permeaseprotein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3257 AAAAAGCGGATGTTGTGGCTGTGG 70 50 TTATGCACCAAGATCAGCAGGTAACGG 69 48 789 none putative amino acid ABC transporter; periplasmicprotein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3258 GTGAATCAGTCGTGTGCCAG 60 55 TCACGTGGAATAATTGAATTTCAG 60 33 216 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3259 ATGAAACAAATCGACGAACGTTTGCG 70 42 CTATTCCAACTCCCCCAACGAATCATACA 69 45 834 none putative rpiR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3260 AAAAATGATCAGCATGGATTGGCCC 69 44 TCATAACCGGTATACCCCCGCGA 69 57 204 none hypothetical protein Other 5.I Unknown [1066] none YPO3261 ATGAAGCCTGCCTCATCACTCACTATCAG 69 48 TCAAATAACAGTACTCACCGGCGCG 69 52 255 none probable amidase Degradation 1.A Degradation [18] none YPO3262 GTGCTTGATAAAGATAGCCATTTGGCGAG 69 45 CTACTCAGCAATCAAGCTCACATGTGCG 70 50 441 none hypothetical protein Other 5.I Unknown [1066] none YPO3263 AAAAACTGACACTCCTGGTTTAAGCCCG 69 46 TTATTCTACGGTTTGATTCGCGGGTTG 69 44 255 none probable sugar transporter Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3264 ATGCCAAACCCAACCACAGCCC 71 59 TCATGGTGTTGGCTCCTGCTCG 69 59 774 none putative amino acid transporter Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3265 ATGAATACAGATATACTGATGATCGGTCTGGTGGT 69 40 TATCCTAAAATCGTTAGTAATTTGAATGTCAAACC 65 29 342 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3266 ATGGAAAGTTCATTCTCCCCCATAGAACAGAT 70 41 TTACTGTTCCGATATTTCCATCTGATCTAAACGG 69 38 513 emrR mprA MarR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3267 ATGAGTGAAAGTGCGGGAGCCCA 71 57 TTAATCGGCGTTTGCATGAATAATATCGC 70 38 255 emrA multidrug resistance protein A Other 5.D Drug/analogue sensitivity [28] none YPO3268 GTGGCACAAAAACCGCTTGAAGGA 70 50 TTAATGCGCACCGCCGCC 70 67 255 emrB multidrug resistance protein B Other 5.D Drug/analogue sensitivity [28] none YPO3269 ATGAACGATTCATTTAGTGGCAAAAACGG 69 38 CTAGCCTTGAGCGCTATTCTGACGCC 70 58 255 yfiF putative tRNA/rRNA methyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO3270 ATGAATACGGTATGTACAGCTTGTATGGCGAC 69 44 TTAACTGTTTGGATCTCTTGATAATTGTTCATCT 65 29 438 trxC thioredoxin 2 Biosynthesis of cofactors; prosthetic groups and carriers 1.G.10 Thioredoxin [10] none YPO3271 GTGACTGACACATTCACCACTGGCCATA 70 50 TTACGCGTTTTCTTCGTGGCTTGC 69 50 750 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3272 CCGGAGCAGTTCCCAGAACTGAAAG 70 56 TCGCCAAATCATCATGGCTGAATTC 69 44 255 yfiQ putative acetyltransferase Other 5.I Unknown [1066] none YPO3273 ATTCAAACGTAGCAAACATCAACAACACCTTGCAC 74 40 TTATAGAATACGGCTAATTAACCGATCAATGCGG 70 38 255 pssA pss CDP-diacylglycerol--serineO-phosphatidyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.11 Phospholipids [9] "Glycine, serine and threonine metabolism. Glycerolipid metabolism" none EC:2.7.8.8 YPO3274 ATGCGGCTGCATATCTATCTTCGCC 69 52 TCAATTCGCTGCCCGATAAAGACTATAACC 69 43 342 5SrRNA 23S_rRNA 16S_rRNA putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3275 ATCCGGTTATTGGCCGTGATGAAGA 70 48 GGGGATTCCCGGTATTAGTTTGCCA 70 52 255 clpB htpM Clp ATPase Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO3276 ATGCCTGCCCGCGTCCG 71 76 TTATATTAGCCAGATTAAACTTGCCATACGCCC 69 39 702 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3277 ATGGCACAACAAGTACAACTCAGCGC 69 50 TTACCAATCCATCTGATCTTTAAATTCTTCAGT 65 30 255 rluD sfhB ribosomal large subunit pseudouridine synthaseD Macromolecule metabolism Synthesis and modification of macromolecules 3.A.3 Ribosome maturation and modification [6] Pyrimidine metabolism none EC:4.2.1.70 YPO3278 ATGACGCGTATGAAATATCTGGTGGCTG 70 46 TTAGGCTGGATTGGCCGCAATTATCT 69 46 732 yfiO putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3279 ATGACAGTTAATATTACCAGCAAGCAAATGGA 67 34 CTATTGTTCCGGTTCGGATTCTGTTTCCT 70 45 363 yfiA putative sigma 54 modulation protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3281 ATGACCGATAATCCATTACTGGTGCTGC 69 46 TTACACTACCAATGCCCCGGATTGC 70 52 255 pheA P-protein [includes: chorismate mutase andprephenate dehydratase] (pseudogene) Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none includes: chorismate mutase and prephenate dehydratase YPO3285 ATGGTGGCTGAACTGACTGCTTTACGCGAT 74 50 CTACTGACGATTATCGTTCGCCTGACG 69 52 255 tyrA T-protein [includes: chorismate mutase andprephenate dehydrogenase] Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none includes: chorismate mutase and prephenate dehydrogenase YPO3286 ATGATCATGCAAAAAGACTCGCTCAATAACG 70 39 TCATGCAGTCCGTGCCGTCAG 70 62 255 aroF phospho-2-dehydro-3-deoxyheptonate aldolase;tyr-sensitive Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:4.1.2.15 YPO3287 ATCGTCGACGATGAACAACCTGCG 71 54 TTATGCGATGCCTAATTTCTCCTTCAGGG 70 45 717 none two-component system response regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO3288 ATAATTATAATTCTATGTTTGCTGTTAGGTACGCG 65 31 AACGTATCTGTTGAGCCATATATATATAGGCCCGC 70 43 681 dcuB genF anaerobic C4-dicarboxylate transporter(pseudogene) Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3290 ATGTTTTCTTTACGTCATACCAAGGCGTTGC 71 42 TTACAGGCCGTAAACCAACGTTATTGACG 70 45 768 ydiY putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3292 ATGAGCAATATTATCAAGCAAATCGA 62 31 TTAGCCAAGACGCTCTTTAATACG 61 42 rplS 50S ribosomal protein L19 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome rplS YPO3293 ATGTGGATCGGTGTTATTAGCCTG 63 46 TCAGGGCTTATGTTCCCGTTG 64 52 trmD tRNA (guanine-N1)-methyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] none YPO3294 ATGAGCAAGCAACTCAATCCTG 62 45 TCAAAAACCAGGATCCCAATCTAC 62 42 rimM 16S rRNA processing protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.3 Ribosome maturation and modification [6] none YPO3295 TCAAAAACCAGGATCCCAATCTAC 62 42 TTAAGCTGCTTTCTTAGCGTCTTTG 62 40 rpsP 30S ribosomal protein S16 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome rpsP YPO3296 ATGTTTGAGAACTTAACTGATCGATTGTCGC 68 38 TGGGAACCCGGGTGGCATCATAC 72 60 255 ffh signal recognition particle protein Cell processes Transport/binding proteins 4.A.6 Other [104] Protein export none EC:2.1.1.31 YPO3297 GTGCAAACGATCTCTGCCCTC 64 57 CTAGCGAACCATAATTTCCTGGAC 62 46 corE putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3298 GTGTTGGAGCACGTATCAACTAGCTCATTGA 70 45 GGTCGAATGTTCTGCGGAAGTCATTGGG 74 53 255 yfjD b2612/b2613 putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3300 ATGCCATTATTGGATAGCTTTACCGTAGACCA 69 41 CTAAATATGCAATTCAGTCAGTTTCTCTTTCGGC 69 38 516 luxS autoinducer-2 production protein Other 5.I Unknown [1066] none YPO3301 GTTTTCAAGAGCGGGAGGTCGATTTGATCC 74 50 TTATTGGCCACCATGAAGCGCTAAATACTCTTCAA 73 40 255 gshA gsh-I b2688 glutamate--cysteine ligase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.10 Thioredoxin [10] Glutamate metabolism. Glutathione metabolism none EC:6.3.2.2 YPO3302 GTGAGTAATACTCTTGCAATTGCTTCATTATTCGG 69 37 TTATTGCCACCAAGCGATCCCTTGC 72 52 429 yqaA putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3303 TCGTCAGGCATGGCGGCA 70 67 TCACAGCAGACGTACATCAACTATTGCCATATT 70 39 534 yqaB putative hydrolase Other 5.I Unknown [1066] none YPO3304 ATGCTTATTCTGACTCGTCGAGTTGGTGAA 70 43 TCAGTAAGTCGTCGGTTGAGACTTTTCTGC 69 47 186 csrA rsmA zfiA carbon storage regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO3305 TGGAAAACGTAGGTTATACCGCGCG 70 52 CGCTCAAGCATTTTACTGCGATCCA 69 48 255 alaS lovB alanyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Alanine and aspartate metabolism. Aminoacyl-tRNA biosynthesis none EC:6.1.1.7 YPO3306 ATGAATGACCAGTTAAGTCGTGCAATGAGACTAC 69 41 TCATTCGACAGAATCAGTGTAAATTGACTGAATT 68 32 564 recX oraA putative regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3307 ATGGCTATTGATGAGAATAAACAAAAGG 63 32 TTAAAATTCTTCGTTGGTTTCATCTG 62 31 "recA, lexB, umuB, recH, rnmB, tif, zab" RecA protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO3308 ATGAGCGAAGGACAACTACGTCAACTCAGTATT 69 42 ACTAATCGGCCCTGCGCGTG 69 65 432 none putative competence-damaged protein Other 5.I Unknown [1066] none YPO3309 TCCCACTTTATAGCGCAACGGTGTTGATGCTATT 74 44 TCATTGTGAATGAGGTGATGGCGTTGTAT 70 41 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3310 ATGTCAAGACAAGATGAACAACGGTTACTGGT 69 41 CTAGAGTAATGTTTCTGCTGTCAGCCGGTC 69 50 255 none putative transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3311 ATGTCAGCAATACCTCGCAAGTTAATTTTTGC 70 37 CCAGTAGCAATCAACGCCCAGATATTTACTGAATG 72 43 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3312 ATGTCAACGCCAATCATTCTGGCTATTG 70 43 TTATTTCGGCTGAAAACGCGCAC 68 48 255 none glycerol kinase Central intermediary metabolism 1.C Central intermediary metabolism [63] Glycerolipid metabolism none EC:2.7.1.30 YPO3313 ATGAGTAATGCAGAACATTTGGCCTCAGTG 70 43 TTATTCCCCTCGGCAAAACCGC 69 55 255 none C-terminal region of transketolase Other 5.I Unknown [1066] Pentose phosphate pathway. Carbon fixation none EC:2.2.1.1 YPO3314 ATGAATCCGTATTCACTGTCAATCGATGAGC 70 42 TTACTCATCGTTTAATTCCTCCAGCGCC 70 46 831 none putative N-terminal region of transketolase Other 5.I Unknown [1066] Pentose phosphate pathway. Carbon fixation none EC:2.2.1.1 YPO3315 ATGATGAAAGCAACAACTGGCACGG 70 48 CTACTCACTTTTTACCGTCTGAGAGATGATTCCC 69 44 255 rbsC putative sugar ABC transporter; permeaseprotein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3316 GACATTGTCATGCGTGCTGAGGACATTTCAAT 74 44 CTGTAACCAATGCCGATTCACTGGCC 71 54 255 none putative sugar ABC transporter; ATP-bindingprotein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3317 CTGTACTGGTGGCGTGCACCGT 69 64 TCAGTGGCTCTCCTTATTCAAACTCAGTGG 69 47 579 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3318 ATGAAAAATACCCTACTGAAATCCTGTCTTACCGC 70 40 CTAGTCTTTCAGCGCAAAGACATTCATGTTCTT 70 39 255 none putative sugar ABC transporter; periplasmicprotein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3319 AAAGCCTCGATCTCTCTCCACTCCG 69 56 CCGCTCTGAGTTCAGGGTTTGAACC 69 56 255 katY catalase-peroxidase Cell processes 4.G Detoxification [10] Tryptophan metabolism. Methane metabolism none EC:1.11.1.6 YPO3320 ATGCGAAAAATTCCAATAATTGCGGG 69 38 ACTATGATAGGTATTACGAATGTTGATTACTTCCC 65 34 384 cybC putative cytochrome B562 Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO3321 ATGCACAAGAAGTATTCCTGCCTGCAAATAG 69 42 TTAACCTCTCTTCTTCGGCATCATGCG 70 48 531 cybB probable cytochrome B561 Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO3322 AAAAATCGGACTAACGGGGCGAGTG 70 52 TTAGCGATATAACTCAACCCCAGCCGG 70 52 696 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3323 ATGGGCTCAGGATGGCATGAATG 69 52 TTAGCCCCCAACCGCCATACC 68 62 861 dmsC anaerobic dimethyl sulfoxide reductase chain C Energy Metabolism Respiration 1.B.7.b Anaerobic [24] none YPO3324 ATGACAACGCAATATGGTTTTTACATCGACTC 69 37 TTATACCTCCTTCGGGTTTGCCAGATGA 70 46 618 dmsB anaerobic dimethyl sulfoxide reductase chain B Energy Metabolism Respiration 1.B.7.b Anaerobic [24] none YPO3325 ATCCCGGCTGTTAACGACAGGTGTC 70 56 ATCTTTTTGCAGTTCCCAAGTCGCG 70 48 255 dmsA anaerobic dimethyl sulfoxide reductase chain A Energy Metabolism Respiration 1.B.7.b Anaerobic [24] none YPO3326 ATGTTAGAACAGTTAAAACAACAGGTCTTTGAGGC 68 37 TTATTGGCCGTAATACGCCGCAGC 71 54 696 araD L-ribulose-5-phosphate 4-epimerase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions none EC:5.1.3.4 YPO3327 ATGTTACAAGCTGAACGCCATAAAATTATTTGCA 70 32 ATCGGATTCAATAATATTTAATTTAGGATTATCGC 65 26 810 fucR putative deoR-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3328 AAAGTTAATATTACCTTGCTTAATAACGACCTTGC 65 31 TTATAAACCGAGCTTCACCAGACGTTTGG 69 45 255 none putative sugar ABC transporter; periplasmicprotein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3330 ATGACTCATATTTCTGATGTTGATAGAGACGTGCC 70 40 TCAGCATCCGTGATTTTGATGTCCAA 70 42 255 none putative sugar ABC transporter; ATP-bindingprotein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3331 ATGGCTAATTTCGGCAGACTCAAACCG 71 48 TCAGACAAAGCCAACATCAGTTTCTTTGC 69 41 255 none putative sugar ABC transporter; permeaseprotein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3332 ATGAAAAAGAACCGTTTTCTACCTATCGACGG 70 41 TTTTTAGATAATTCAAACGGTTCTGCCTCATGG 70 36 255 none putative sugar ABC transporter; permeaseprotein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3333 ATGCGCATTCACCCACTAGGAATATACGA 70 45 TTAGCGGGTTAACTGGCCGGATTC 69 54 882 sgbU putative hexulose-6-phosphate isomerase Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3334 ATGAGCCACTATTTTCTCGGCATTGATCT 69 41 TTACATTACCGTGCTGAGCGCTTCAG 69 50 255 sgbK lyx lyxK xylK putative L-xylulose kinase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions none EC:2.7.1.53 YPO3335 CGTTCCACTATCAGGATCCCTTCCCGC 74 59 TTGGATCTGCTGGAAGAAATCATTGCCCTTATCAT 74 40 255 fumA fumB fumarate hydratase; class I Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Reductive carboxylate cycle (CO2 fixation) none EC:4.2.1.2 YPO3336 ATGGGTATCGTTAAAATATCTGATTTGATGCATGA 69 31 TCATTGCGCTTTCTCTCCATTATTCAGC 69 43 252 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3337 ATGACCGAAGTCAAAATCCACTCACCG 70 48 TCAGATGGCTTCGTATTCGCCAGTG 70 52 786 map methionine aminopeptidase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO3339 ATGCATATTGATCACTACAGCTTGCCCG 70 46 CACGTGTACTCATATTGTCCAAAGGAAGGGGTTCT 73 46 255 none hypothetical protein Other 5.I Unknown [1066] none YPO3340 ATGCTGGGAATAAATTACACCTTTACCGATAGTGA 69 37 CTAGAAATTAACATTCACGGATACCCAGTAATTAC 65 34 468 none putative exogenous ferric siderophore receptor(pseudogene) Biosynthesis of cofactors; prosthetic groups and carriers 1.G.14 Iron uptake [32] none YPO3342 GTGATAAGAAGAGGATTAATTGGTGGCGGT 69 43 GGTCAAACTTTCCAGGAAGGCCACTATATCGTT 72 45 255 yhjA putative cytochrome C peroxidase Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO3343 AAAAATTATCTTTGGGAATAATGGTATTGGCATT 67 26 CTACTCAGAAATATTCCACTTTTGTGCTAATAAGG 65 34 765 none probable extracellular solute-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3344 TTGATGTTGATACATGCAAAAGC 60 35 TTATTTAAGCTGTAAAGTCATTAATTTCATCTC 61 24 207 none hypothetical protein Other 5.I Unknown [1066] none YPO3345 TTGAGGACAATACCAATGACAGC 61 43 TTATTTTTCTGCCGGATGAGC 61 43 279 none hypothetical protein Other 5.I Unknown [1066] none YPO3346 ATGACAACACTCACGCCGTTGCA 70 52 TTAGTTACACAACATTTTGCTGTCGGGAGTG 69 42 342 arsR arsenical resistance operon repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO3347 ATGTTGTTGGCTGGTGCTATTTTTATCCTGA 70 39 TTACATCGATACGGACAATCGTAGTGCGA 70 45 255 arsB arsF arsenical pump membrane protein Other 5.D Drug/analogue sensitivity [28] none YPO3348 ATGGAAAAGCAGATGATCCCACAAGACA 70 43 TTACGACTGATGTTGAATCATCTTCAAAATAG 65 31 255 none transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3349 ATGAAGGCATTGTTGATAACCGATGGATCTA 70 39 CTATGGCACCAACCGCCGTTCTAC 69 58 675 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3350 GTGCTGTCGTTGCGCGCG 71 72 TTACTCCAACTGGGTTAAGCCTAATGAATGAGTG 70 41 255 dhaK ycgT putative dihydroxyacetone kinase Other 5.I Unknown [1066] Glycerolipid metabolism none EC:2.7.1.29 YPO3351 ATGCCAAACGACTATAAATGGTTTGATACGG 69 39 CTATTGGATGGTATACCCACCATCAATGACTAAA 68 38 771 none putative dehydrogenase Other 5.I Unknown [1066] none YPO3352 ATGAGTCACGAAAACCTTAAAGGCGCTC 69 46 TTAGGTTAGGTTGGGATTGAGAACCACTTTAAGT 68 38 255 ydjJ putative Zinc-binding dehydrogenase Other 5.I Unknown [1066] none YPO3353 ATGTTATCTATTGCAATCGGCTGTGATGATG 69 39 TCAATCATGCAGGCTCTGTTCGTAATAGC 69 45 456 rpiB ribose 5-phosphate isomerase B Energy Metabolism Pentose phosphate pathway 1.B.5.b Non-oxidative branch [4] Pentose phosphate pathway. Carbon fixation none EC:5.3.1.6 YPO3354 TCGGTTAAAAGCCCAGCATCCTGAA 70 48 GGCGTTATGCAGAATATTCGCGGTC 69 52 255 mutS fdv DNA mismatch repair protein MutS Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO3355 ATGAGCCAAAGTACGCTGAAAGTTAACGAGTT 69 41 TTATTCGCGGAACAACGCCTCG 70 55 255 rpoS katF appR sigS otsX nur RNA polymerase sigma factor RpoS Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO3356 ATGATTAGATTACGCCGAGTCGCGG 69 52 CTATCGCTGCGGAAGGTAACGCAG 69 58 255 nlpD lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3357 ATGGTAAATAAACGCATGCAAACATTGTTGA 69 32 TTAGGCAAGTTCCCCTTTAACCAGAGGAAC 69 47 627 pcm protein-L-isoaspartate O-methyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO3358 ATGCGCCCACGGCCTGA 69 71 TTACCATTCCCCGTCAACCTCAGTATTG 69 46 534 surE stationary-phase survival protein Other 5.F Adaptions and atypical conditions [36] Riboflavin metabolism none EC:3.1.3.2 YPO3359 ATGGATATGGAAAACCTGACCTGGCTACAC 69 47 TTACTCAATAATATCCGTATCATCAGCCCGATC 69 39 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3360 ATGCGGATCGGTCATGGTTTCG 70 55 TTAACCCTGTTCTACGTTAACTAATAAAACCACCG 68 37 489 ispF mecS b2746 2C-methyl-D-erythritol 2;4-cyclodiphosphatesynthase Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3361 ATGAGTAACTTCGCAGTTTCCCTTCCTGAA 69 43 TCAGAGACTGTCGTTATTGAGAGACTGCCG 71 50 726 ispD b2747 4-diphosphocytidyl-2C-methyl-D-erythritolsynthase Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3362 ATGGGAAAACTTACGCTACTATTGCTGGTTTTG 69 39 TTATTGCGCGTTATTTTGTGTCGAAGG 69 41 321 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3363 ATGCAGAATGTCACCCAAATTATGAACGA 69 38 TCACCAACCCGTAAGCAGTGAAAACAG 69 48 318 ygbE putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3364 GTGCCAGCCCATCAGTTAGATGACCATA 70 50 TTAGGATTTGATAATAGCTCTACCACGCAGTACGT 68 40 642 cysC adenylylsulfate kinase Central intermediary metabolism 1.C.5 Sulphur metabolism [13] Purine metabolism. Selenoamino acid metabolism. Sulfur metabolism none EC:2.7.1.25 YPO3365 ATGAGCACGATATTGCAAAACAAGCAGAC 69 41 CCCCCAGCAGATCACGCG 68 72 255 cysN sulfate adenylyltransferase subunit 1 Central intermediary metabolism 1.C.5 Sulphur metabolism [13] Purine metabolism. Selenoamino acid metabolism. Sulfur metabolism none EC:2.7.7.4 YPO3366 ATGGACGAAAAACGACTCACTCATTTACGG 70 43 TCAGAAATATCCCTGACGCTTTTTAAGCTCC 69 42 909 cysD sulfate adenylyltransferase subunit 2 Central intermediary metabolism 1.C.5 Sulphur metabolism [13] Purine metabolism. Selenoamino acid metabolism. Sulfur metabolism none EC:2.7.7.4 YPO3367 GTGGACTATCTACCTCTATTTGCCGACTTGAAAC 69 44 TTATGCCAAATTCACGACTGATGGGC 70 46 255 cysG siroheme synthase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] Porphyrin and chlorophyll metabolism none EC:1.-.-.- 2.1.1.107 4.99.1.- YPO3368 GTGGGTATCATACCTACAAGTAGTATTGAGT 61 39 CTATTTGGCTACGTACTGACCCG 62 52 267 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3369 ATGAGCGAAGGCAACCAACGCA 71 55 TTAGCTGATGATTTTCTCACGGGCTAGCTC 70 47 477 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3370 CAAACCTGGTTTGCGCCGTGA 70 57 TTAACCTTCGTGCAAACCACACTCGC 70 50 285 cysH phosphoadenosine phosphosulfate reductase(pseudogene) Central intermediary metabolism 1.C.5 Sulphur metabolism [13] Sulfur metabolism none EC:1.8.99.4 YPO3371 CGAGCGCATGAAGTCGGAAAGCAATT 73 50 ACTGGTGCAATGACCCCTGCACGAATAA 73 50 255 cysI sulfite reductase [NADPH] hemoproteinbeta-component Central intermediary metabolism 1.C.5 Sulphur metabolism [13] Selenoamino acid metabolism. Sulfur metabolism none NADPH YPO3372 ACTCAGGCTCCTCCAACTTCGTTACTTCCGCTAT 74 50 TGGCGCAACTCACTTAAATATTCATCAGCCTG 73 44 255 cysJ sulfite reductase [NADPH] flavoproteinalpha-component Central intermediary metabolism 1.C.5 Sulphur metabolism [13] Selenoamino acid metabolism. Sulfur metabolism none NADPH YPO3373 ATGAGCACCACCCTATTTAAAGATTTTCAGTTTGA 70 34 TTACCCGCGATAAACGCAGCCA 70 55 360 ygcM putative 6-pyruvoyl tetrahydrobiopterin synthasefamily protein Other 5.I Unknown [1066] Folate biosynthesis none EC:4.6.1.10 YPO3374 ATGCTGTACCCGATTAATGAAATGTTCCAGA 69 39 TCAAGCGATATTGAGATATTTATGTGTCTGCATC 68 35 672 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3375 GTACATTATTGCTACCTGTTATTCTTTACTCCAGC 65 37 TTACTCAATGACTCCACATGCCATCCG 70 48 606 sodC superoxide dismutase [Cu-Zn] precursor Cell processes 4.G Detoxification [10] none YPO3376 ATGTCCAAAATTGTTAAAGTCATCGGTCGTG 70 39 TTACTGGCCTTTAACTTCTTTCAGACCGTTGA 70 41 255 eno enolase Energy Metabolism 1.B.1 Glycolysis [12] "Glycolysis / Gluconeogenesis. Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:4.2.1.11 YPO3377 CAACTAATTATATTTTTGTGACCGGCGGGGTCGTA 74 43 GCTTTTGATAATCACCAGCCGCTTTCACAA 72 43 255 pyrG CTP synthase Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Pyrimidine metabolism none EC:6.3.4.2 YPO3378 ATGACTCAACCTGTTACTTCCCCTGATTCTACAG 69 44 TTACATTTCAGTTTCTTGCTTTTTAACTTGCTGCC 70 34 843 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3379 TTGATCTTGCGCTTTGCTC 60 47 TTATTCACTTTTTTTGTTTTTTAAATTCAAA 61 13 159 none hypothetical protein Other 5.I Unknown [1066] none YPO3380 TGAACAACAGACGCAAAACCATCCC 69 48 TCGCCACCATCTTTTTGGTATCGCT 70 48 255 relA GTP pyrophosphokinase Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Purine metabolism none EC:2.7.6.5 YPO3381 TCACTCGCGGCCTATCATGAAGAGA 70 52 GCCACTCGGGTTCTAAATCCTGCAA 69 52 255 barA two-component regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3382 CAACTTTAGTATTAAGTGCATTGGCATTGAGCATT 69 34 TTACTGCATCAATAAATAGAGTGAAGTATCACCAC 65 34 1446 gsrA degP htrA ptd global stress requirement protein GsrA Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO3383 ATGTCCGGGATCGACTTTAAGCAGAAAATAAG 70 41 CAGCCATTAAACGCCGGTATTCATCATAAGCATA 73 41 255 dgt deoxyguanosinetriphosphate triphosphohydrolase Central intermediary metabolism 1.C Central intermediary metabolism [63] Purine metabolism none EC:3.1.5.1 YPO3384 ATGAAAGTAGGCATTATTGGCGCCATG 69 44 TTAACCGCGTTGCGCCAAGG 70 60 702 mtn pfs MTA/SAH nucleosidase Purines; Pyrimidines; nucleosides; nucleotides 1.F.5 Miscellaneous nucleoside/nucleotide reactions [9] Arginine and proline metabolism. Methionine metabolism none EC:3.2.2.16 3.2.2.9 YPO3385 ATGATGCCACTGGGTCTTTTTCCTCTG 69 48 TTAATGTGACTCCGCGACAGGGGT 69 54 843 yadT btuF putative priplasmic metal binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3386 ATGCTGGTTTATTGGCTGGATATCTTAGGTACTG 69 41 TCAATGCTCTATTTCGAAGGTTGGTAGTTTTAAA 68 32 615 yadS putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3387 TACAGTTTACCGAGGCGGCGGC 71 64 TTAGATACTGAAAGAAGAACCACACCCACAAGTAC 68 40 351 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3388 ATTGGCGTAAATTAGTTCTGATCGGTGGC 70 45 TTATTTGCCTATTTGTGGGGTATTTTCAACCG 70 37 588 yadQ putative chloride channel protein Cell processes Transport/binding proteins 4.A.5 Anions [14] none YPO3389 ATGAGTAAATCCGAAAATCTGTATGCCCAAGC 70 41 CAAAGCATCGACGAGCGGCATTGA 73 54 255 hemL gsa popC glutamate-1-semialdehyde 2;1-aminomutase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] Porphyrin and chlorophyll metabolism none EC:5.4.3.8 YPO3390 CTGCGGGTCTACTTGGCCTACTGGTGGTTAT 73 55 TTACCGCCCCTGTGTGCGC 69 68 255 fhuB ferrichrome transport system permease proteinFhuB Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO3391 ATGAAGACACATTTACCCATGGATCTCTCTTCTT 69 38 TCATGGTGCTTTCCCCCACG 68 60 255 fhuD ferrichrome-binding periplasmic proteinprecursor Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO3392 TTGGACCTACAGGCAAGCCACTCC 69 58 TTAATAAACAAAACTTACCGGCGCACCG 70 43 795 fhuC ferrichrome transport ATP-binding protein FhuC Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO3393 GATGCAATACCGTCAGGTCAGTCGC 69 56 CCCTGACACAAAGCTTGCGGATTTT 69 48 255 mrcB ponB pbpF b0149 penicillin-binding protein 1B Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Biotin metabolism. Lysine degradation none EC:2.4.2.- 3.4.-.- YPO3394 TTGGTGGTTGATAGCGGGCTGG 70 59 TTTTTGGTTCTGCGGGTTGGCC 70 55 255 hrpB ATP-dependent helicase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO3395 ATGACAAATACCGTTGACGAATTAAAACGTGTC 69 36 TTAGCAGGCATCTGGTTTCCTTTCACTG 69 46 576 ligT putative 2'-5' RNA ligase Other 5.I Unknown [1066] none YPO3396 ATGCCTGCTAACGCCAACTTGCC 70 57 TTATTCAGCGTTTTCTGATGAAAGCATTTCG 70 35 861 sfsA sfs1 sugar fermentation stimulation protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3397 ATGCAAGAAGGGCAAAAACGTAAAACCTC 69 41 TTAGCCTGCCATCTGCTTTTCGC 68 52 456 dksA DnaK suppressor protein homologue Broad regulatory functions 2 Broad regulatory functions [235] none YPO3398 ATGCTTGAAGATACTGGTTTTCAACGACTATTTAG 67 34 TCATAGCTCACCATACTTACTTTGAGAATGCCG 70 42 255 yadB putative glutamyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] none YPO3399 GTGCTGATCCGCGAAGACAAAACG 70 54 TTATACCCCTTCTTTACGGGGTACTGGCTTG 70 48 255 pcnB poly(A) polymerase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO3400 ATGATCCGGGTCTATATCGCGCTG 69 54 TTACCAGAGAACCAAGCCGTTCTTATCGA 69 45 480 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.2 Folic acid [9] Folate biosynthesis none EC:2.7.6.3 YPO3401 ATGAAAACCACCACCATGAGCCAATTAC 69 43 TTACTGGAATGTATGCTCTTCAGCAGGATAAATCC 70 40 798 panB 3-methyl-2-oxobutanoatehydroxymethyltransferase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.5 Pantothenate [4] One carbon pool by folate. Pantothenate and CoA biosynthesis none EC:2.1.2.11 YPO3402 ATGCTGATTATTGAGACATTGCCATTGCTAC 69 39 TCAGTGGCGCAAATCAACCAGTTG 70 50 855 panC pantoate--beta-alanine ligase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.5 Pantothenate [4] beta-Alanine metabolism. Pantothenate and CoA biosynthesis none EC:6.3.2.1 YPO3403 ATGATACGCACTATGTTGCAAGGCAAACTG 70 43 TTAAGCGACCTGAACTGGCACTGCC 71 56 381 panD aspartate 1-decarboxylase precursor Biosynthesis of cofactors; prosthetic groups and carriers 1.G.5 Pantothenate [4] Alanine and aspartate metabolism. beta-Alanine metabolism none EC:4.1.1.11 YPO3404 ACAACCCAGGCTGACCTCTTGCCAAAT 72 52 TTAATCCATTTCAATCACTGCGGGTGC 70 44 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3405 ATGACCCGCCTGTATTGGATAGCCTT 69 50 TTAGGTACGTAACCCGGTTCCACGCT 69 54 771 yadH putative ABC transporter; integral membraneprotein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3406 ATGACATATGCACTGGAAATAACGCAGTTGA 70 39 TCATGCTTTCTCTCCCTCGTGGC 69 57 255 yadG putative ABC transporter; ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3407 ATGGGGCTCTTGGTGGTCCTGC 70 64 AATGGTCTTCTTTATTGTTTTGTAATAACTCAGCC 66 31 876 yadF putative carbonic anhydrase Other 5.I Unknown [1066] Nitrogen metabolism none EC:4.2.1.1 YPO3408 GTGAGGCACACTGTAGAAGTCATGATTTCC 68 47 TCACTCGTCTAAAGTGACAACCTTACCTACATACG 68 43 537 hpt b0125 hypoxanthine phosphoribosyltransferase Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Purine metabolism none EC:2.4.2.8 YPO3409 ATGCATCGCCGTGATTTTCTTAAGTTAACG 70 40 CATGCCAGTATCTTCATGTTCCAATAAGTGGCAGT 73 43 255 yacK putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3410 ATGAAAAGAACAACGTTAGTCATGCTGCTGC 70 42 TCAATTAGCGTAGGCTAATAAACTCAAAGAGTCAC 67 37 348 yacC putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3411 ATGTCACAGAAAGAACTATGGTATGAAACATTACA 66 31 TTATTCACTTGAATCGACGCCAATGACTTT 69 37 891 speE spermidine synthase 1.E Polyamine synthesis [5] Urea cycle and metabolism of amino groups. Arginine and proline metabolism. beta-Alanine metabolism none EC:2.5.1.16 YPO3412 TTGTCCAAGCTTAAACTGCACGGCTT 69 46 TCACACTTCCGGCACATTGCG 69 57 795 speD S-adenosylmethionine decarboxylase proenzyme 1.E Polyamine synthesis [5] Arginine and proline metabolism none EC:4.1.1.50 YPO3413 ATGAACCGCCTCCCAACCCTGT 69 59 TCAAGTACGAAGGGGATTTCGGCTG 69 52 909 yddG putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3414 ATGGATTATGAATTCTTGCGTGATTTAACCG 69 35 TTATTGTGTAATAAAAGCCCGATAGCCTTTCAACA 70 34 360 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3415 GTTCCTCCCGTAAATCGGCGACTAACTCCGTATTA 74 49 GTCAGCTTTATCCGTATATTGGCTTAACTGATCAA 69 37 255 acnB aconitate hydratase 2 Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Glyoxylate and dicarboxylate metabolism. Reductive carboxylate cycle (CO2 fixation) none EC:4.2.1.3 YPO3417 ATGAGTACTGAAATTAAAACTCAGGTCGTGGTACT 67 37 ATTTCTTTTTCGCTTTCGGGTTAGGCAGGTCAGTA 74 43 255 lpdA lpd dihydrolipoamide dehydrogenase component ofpyruvate dehydrogenase complex Energy Metabolism 1.B.2 Pyruvate dehydrogenase [4] "Glycolysis / Gluconeogenesis. Citrate cycle (TCA cycle). Glycine, serine and threonine metabolism. Pyruvate metabolism" none EC:1.8.1.4 YPO3418 TAATGTACCAGACATCGGTGCAGATGAAGTGGAAG 74 46 ACGGCGAATATCCGCCATAATGGTAGCGATATA 74 45 255 aceF dihydrolipoamide acetyltransferase component ofpyruvate dehydrogenase complex Energy Metabolism 1.B.2 Pyruvate dehydrogenase [4] Glycolysis / Gluconeogenesis. Pyruvate metabolism none EC:2.3.1.12 YPO3419 GTTCTGCTATCCGTTGGAATGCGGT 69 52 TTTAGCCAGAATCTGAGCCGCTTCG 70 52 255 aceE pyruvate dehydrogenase E1 component Energy Metabolism 1.B.2 Pyruvate dehydrogenase [4] "Glycolysis / Gluconeogenesis. Valine, leucine and isoleucine biosynthesis. Pyruvate metabolism. Butanoate metabolism" none EC:1.2.4.1 YPO3420 ATGGCCTACAACAAAATACGTCAACCCAA 70 41 CTACTCCTTGCGCTGTTGGAGCC 68 61 765 pdhR aceC genA pyruvate dehydrogenase complex repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO3421 CTGAGCTAAAACGGGGGCTTAAAAACCGC 73 52 TTTCCTGCTGCTAGCGCTCAGTTGCTGATT 74 50 255 aroP aromatic amino acid transport protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3422 ATGACATTGTTTACGCTGTTACTGGTGCTG 69 43 TTAAACCAGTGCGCCGTAAATCGTCA 70 46 855 ampE putative membrane-bound sensory transducer inbeta-lactamase regulation Broad regulatory functions 2 Broad regulatory functions [235] none YPO3423 ATGCTGCTGGAAAACGGCTGGAT 69 52 TCATACAAGCAACTTAGCTAAATTTTGTTGATAAA 65 26 552 ampD putative signalling protein in beta-lactamaseregulation Broad regulatory functions 2 Broad regulatory functions [235] none YPO3424 ATGTTTAGACGATTGTCTATTCGCCATTTCG 69 39 TTACTGGAAACGCATTGAGAGGTCTAACGC 70 47 255 nadC nicotinate-nucleotide pyrophosphorylase[carboxylating] Biosynthesis of cofactors; prosthetic groups and carriers 1.G.7 Pyridine nucleotide [6] Nicotinate and nicotinamide metabolism none carboxylating YPO3425 ATGGCTAAACATCAGGGTTTAACATTACAGAAAGG 69 37 TCAGCCATTTGATGGGGCCTTATCAT 70 46 465 ppdD putative prepilin peptidase dependent protein Dprecursor Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO3426 ATGGCTGAATTTATAGTGTCCTCATTTGAAACAA 68 32 AGCCCACAACACGATTAATTTCACTAAGGGTAGT 70 41 255 hofB hopB putative type II secretion system protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3427 ATGCTACTGGCAACTGAGAGAAACAGTGTCTATG 70 44 TTATCCAATAACATCACCTAACTGGAATATGGGT 67 35 255 hofC hopC putative type II secretion system protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3428 ATGCGCATTGAAGAAGGTTTGAAATTAGG 69 38 TCAATCAGTGCCAAATACGCGGTTTT 69 42 255 guaC GMP reductase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism none EC:1.6.6.8 YPO3429 GTGATCGGGCGTAAAACACG 64 55 TTATTTACTGCCATTGGATGGG 61 41 246 none hypothetical protein Other 5.I Unknown [1066] none YPO3430 ATGACCTATATTGTGGCTCTCACAGGTGGG 70 50 TCATTGATGTAGATCCTGTTGGGCCG 70 50 621 none conserved hypothetical protein Other 5.I Unknown [1066] Pantothenate and CoA biosynthesis none EC:2.7.1.24 YPO3431 ATGAGTGACCTTACCTCAACAATACTTTTTGAACA 68 34 TCAGCAGCAGGCTAATTCAAACGATAAAC 68 41 753 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3432 ATGGAATCAGAACAAATACAGGTTAACT 61 32 TTAATGCTTAAGAGGATCTTCCTCAC 60 38 207 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3436 ATGTCTGAGCAACCACTACAGAACTCGCTTT 70 45 TCATCCGTCGTTGACATCTGGGG 70 57 255 none hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO3437 CATTAGAATGGTTTCGTCTGATATGAGCACCATTA 70 37 GCTCCGCTTTATCGAATACCTCAGCGAATTTG 74 47 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3438 GATGTGAAGGTTCGTACAGCCAAGCCTGAA 73 50 TCAGCTCGTATTCAACTTCGCAAAATCAA 69 38 255 intB integrase none YPO3439 ATGTTTGGTGTATTAGACCGCTATATCGGACG 70 44 TTACCGCCGTTTTAGCAGCAAACAAA 69 42 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3440 GTGATCATCATTAGATATCTGGTACGGGAAACCTT 69 40 TCAGGCAGCACCTCTCAATCGAGC 71 58 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3441 AAAAACAGCGTAGTGCCTGTATTGTAGTCGGCGT 74 47 GCCGTTTAAGCCCGCGCGAT 72 65 255 pepA xerB carP cytosol aminopeptidase Other 5.I Unknown [1066] none YPO3442 TTGTGCCCTTTACGTTGTAGAGAATTTATGAAAAA 69 31 TCAATTAGTTGGCGGCGTTGCC 70 55 477 holC DNA polymerase III; chi subunit Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] DNA polymerase none EC:2.7.7.7 YPO3443 CCAAATGCGTCGTTTGGGTAACTCC 70 52 CTTGTTCATCGACTTGGCTGGCATC 69 52 255 valS valyl-tRNA synthetase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] "Valine, leucine and isoleucine biosynthesis. Aminoacyl-tRNA biosynthesis" none EC:6.1.1.9 YPO3444 ATGACCACAACCACACCTATCCGGC 70 56 TCAAAACCTAATCTTTCGTACAGACCAACAGCA 70 39 435 none putative acetyltransferase Other 5.I Unknown [1066] none YPO3445 ATGGCAAACCGCGAACTGCTAGAC 69 54 TTAGTGACGCTTACCGTCGTCATCCTCAT 70 48 432 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3446 ATGAATCAGTTCTATAAACGTCACTTTCTGAGGTT 67 34 TTATATTTTGCTCATCGTGGCGACCATC 69 43 255 argI ornithine carbamoyltransferase chain I Amino acid biosynthesis 1.D.1 Glutamate family [19] Urea cycle and metabolism of amino groups. Arginine and proline metabolism none EC:2.1.3.3 YPO3447 ATGATTATCGGAAATATTCATCATTTGGCACTG 69 33 CTATTTCACCGCTATTTTAACAACCGCTTTACG 69 39 459 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3448 ATGAAAGCAAAAGTTCTGTCATTATTCGTTCTGG 70 35 CCCCCTGCGCAAAGCTGG 69 72 255 none putative extracellular solute-binding protein(pseudogene) Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3450 ATGTCTGTAGCATTAAATACCACGCCGG 69 46 TCAGCGCGTTCTCGGATCTAGCA 70 57 255 none putative transporter; permease protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3451 ATGCCAATAATAAAGTTCTACCGCACGCTG 70 43 TCAGTCATGGTGAGGATCCAGAATATCG 69 46 837 none putative transporter; permease protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3452 ATGGCCTACGCGATATTCTGGATCCTC 70 52 TCAATCAGTGCCACGGGAGCC 69 62 909 none putative ABC transporter transporter;ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3453 GTGGCACTGATTGAAGTGAACAATTTGC 69 43 TTACCCCATCGAATGCTCCGCC 71 59 717 none putative ABC transporter; ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3454 GACGGCTGCCAGGTACCTTTTGATG 70 56 GACACTTTCGATGGCTCATGGTTGC 69 52 255 nrdD anaerobic ribonucleoside-triphosphate reductase Purines; Pyrimidines; nucleosides; nucleotides 1.F.3 2'-deoxyribonucleotide biosynthesis [8] Purine metabolism. Pyrimidine metabolism none EC:1.17.4.2 YPO3455 GTGATTAATGGCCCCGGCACC 69 62 TTAACGTAAACAGTGAATAACCTGATTGCTGCTG 70 38 435 nrdG anaerobic ribonucleoside-triphosphate reductaseactivating protein Purines; Pyrimidines; nucleosides; nucleotides 1.F.5 Miscellaneous nucleoside/nucleotide reactions [9] none YPO3456 ATGAACTTATCTAGACCACCGACCAGCTATCC 69 47 GGGGGCGGGGCAATGAC 69 76 405 phnF probable gntR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3457 ATGGAAAGCACGTTGATGACCCG 69 52 TCAATCTTCTCCCCGAACTAATGTGAAGAAA 69 39 477 phnG PhnG protein Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3458 ATGAGTCTACTGACGCATTTTGACCAGCC 70 48 TCAGCACACCTCCACATGAGTGGTC 69 56 627 phnH PhnH protein Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3459 ATGTACGTTGCCGTGAAAGGG 64 52 TCAGTCATGGTGTGGCTCCT 62 55 phnI PhnI protein Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3460 ATGACTGAGGTTCTCACTGGCTACAACCTG 70 50 TCAGACAGGTACCTCGGTTGGGGA 69 58 882 phnJ PhnJ protein Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3461 ATGATGTCAGCCCAATCTACCCCTCAG 69 52 TTAGTTTTGCAGTACCGATGAGACCAGGAGT 69 45 792 phnK phosphonates transport ATP-binding protein Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3462 ATGAACCCCCTACAACTCCGGGTTG 70 56 TCATACAGGGATCTCCGTGCGGA 70 57 720 phnL phosphonates transport ATP-binding protein Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3463 ATGATCCTCAATAACGTCAGCCTGATTCTTG 70 42 TCAGAACACCCTAACTCCCTGACGCC 71 58 255 phnM PhnM protein Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3464 ATGGCGCGTTTAATCTATCTGATGGGG 70 48 TCAGTTGCATGGTTTATCCTCAACGG 68 46 582 phnN PhnN protein Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3465 ATGCAACTGACGCTGTTAGGCACC 68 54 TTATACCAGCGTAACCGTTTGATTATCATAGGCA 70 38 753 phnP PhnP protein Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3466 ATGGCGAAGGTATTATTACTGGGGGCG 71 52 TCAAGGACGCAGGGTAGGTTGCA 70 57 639 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3467 GTGAATAATCCTGATGACGTGCTGTTGATC 69 43 TCATAACGGCTCCACACGCGAC 69 59 444 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3468 ATGACGCCAATAAAAACGGCAGTGAC 69 46 TCAACTTTGCCACAACAGGCGATC 69 50 255 none hypothetical protein Other 5.I Unknown [1066] none YPO3469 ATGGGATCGGTTGTACTTAAAAATGTGTGTAAATC 68 34 TTATGCCGCCTGGCAGTCAACC 70 59 255 none putative sugar ABC transporter; ATP-bindingprotein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3470 ATGAAAAGTAAAAGCTGGAACAGTATCGGCC 69 42 CTAGCCTTTAACCGCGCCAGACATG 70 56 840 none sugar transport system; permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3471 CCCCCGACTGAAACGTAACCTGGT 69 58 TTTTTCAAGGTGAGATGACCTATCGTCAGC 69 43 885 none sugar transport system; permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3472 ATGAAGACGCAAATGATAATGTCAAAAGTAAAAA 67 26 GCCCTAAGACGTTCTGTTTAGCCAACTCATCATTA 72 43 255 none putative sugar binding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3473 ATGATGCTAAACTCTGGTGCTAAAAACCTATTACT 66 34 TTATTTTTGCGTTGTGATTGGGTAAAGTAAGATTT 68 29 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3474 GATCGGCAGATGGTTAAAATCCGCC 70 52 GATGGATACGCCTGGCTAAATTGCG 69 52 255 none hypothetical protein Other 5.I Unknown [1066] none YPO3475 ATGTCAGATAGCCTTTGGCATCTCTATTTGCT 69 41 TCACGAGTCTAAAAATAGCGTTGTCAATAACCTC 68 38 288 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3476 GTGTTGATCCGGGTTGAAATTCCG 69 50 CTAAAAGCGATTGAATGGGGCAGAGAAC 69 46 507 none putative acetyltransferase Other 5.I Unknown [1066] none YPO3477 ATGTGGCAGAATAGCGGTACTTGGCAT 69 48 TCAACACGATGCCAGCCCG 68 63 603 none putative lipid carrier protein Other 5.I Unknown [1066] none YPO3478 TTGCTAACCTATGAAAATGGGC 60 41 TCACATCGCACCTTGATTTAAG 60 41 126 none hypothetical protein Other 5.I Unknown [1066] none YPO3479 ATGGAGCTGCTGTGTCCTGCGG 71 64 CTACTGCCACTTACGATGATAAGCGCCC 70 54 255 none putative protease Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO3480 ATGAAGTACGCCTTAGGCGCAGTACTCTATTACTG 70 46 TTACGACACCAGTTCTAACCCGGCAA 70 50 879 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3481 ATGTTCAGTCGTATACTGATATTATCGTTACCCGC 69 40 CTATTCTTTGGCGACGTCAGATACCCC 69 52 255 ibeB probable outer membrane efflux lipoprotein Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO3482 CGACCAAACTGGCCGCTTACAATCT 69 52 CTCCACGCATAACTGGTGCCAGGTA 69 56 255 none multidrug efflux protein Other 5.D Drug/analogue sensitivity [28] none YPO3483 ATGCACAGTAAAATTATTTTGGCCTGTTTGGT 69 34 TTATTTCTCCCCAGTTGATGGCGTAGTC 68 46 255 none multidrug efflux protein Other 5.D Drug/analogue sensitivity [28] none YPO3484 ATGGACGATTCTATGATTGATAACACCGGTTC 70 41 TTACCGGCGCGGGGTATGC 70 68 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3485 ATGCTACGTAAGGCACTACTCAATAGTCTGGTTG 69 44 TGAGTAAATATTTTCTTCATATTGGCAGCAAAATC 67 29 222 none putative transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3486 ATGGGCAGGGATGACCAAA 64 53 TTATTCCTCACCCTGAGAACGG 63 50 369 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3487 ATGATTAAACGTAAAAACCAGCCTT 60 32 TTAAGTTAACAAATACATCTCTCTATCCAAAG 60 28 174 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3488 ATTCTTTCCGCTCTGACTGATCTTGGTTATGAAAA 71 37 TTATGCATCACCGAAGCGACGAC 68 52 255 deaD csdA mssB cold-shock dead-box protein A Other 5.I Unknown [1066] none YPO3489 ATGAAGCCTTTCTTGCGCTGGTGTTAC 69 48 CTATTGCTGGTCCGATTCCGATAGGTC 69 52 885 nlpI lipoprotein NlpI Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3490 CCGTATCACTGAAAAACAAGAACG 62 40 TCAGGAGTAGTGGCTTCTTTGATG 62 46 ~1400 pnp polyribonucleotide nucleotidyltransferase Macromolecule metabolism Degradation of macromolecules 3.B.1 RNA [13] Purine metabolism. Pyrimidine metabolism pnp EC:2.7.7.8 YPO3493 ATGTCTCTAAGTGTTGAAGCGAAAGCTAAAATTGT 68 34 TTAGCGACGCAGACCTAAACGTTCGAT 70 48 270 rpsO secC 30S ribosomal protein S15 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none EC:2.7.7.8 YPO3494 ATGGGGCGTCCACGTCGTC 68 68 ACTTTTTATTTTCTACTGGCAGATTTTCTACTTCC 65 31 255 truB p35 tRNA pseudouridine synthase B Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Pyrimidine metabolism none EC:4.2.1.70 YPO3495 ATGGCAAAAGAATTTAGTCGTTCTCAGCGT 69 40 TTACTTCTCCTCGTCACTACCTGGATTAACCTGA 70 44 411 rbfA p15B ribosome-binding factor A Macromolecule metabolism Synthesis and modification of macromolecules 3.A.3 Ribosome maturation and modification [6] none YPO3496 GCTCAGACCGATAAAGCACGTCGTG 69 56 CACGCAGAACACGGATTGGATTGTT 69 48 255 infB ssyG translation initiation factor IF2-2 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO3497 AACAAAGAGATTCTGGCTGTTGTAGAAGCAGTTTC 70 40 CATTATCGCCAAACCAACAGATATTACGTGCGG 74 45 255 nusA N utilization substance protein A Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO3498 TTGGGGGTGGGCTTGTCCAC 69 65 TTAAAAGTGGGGTACCAGGTTCGCTTTCT 69 45 465 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3499 ATGTACGAAGCTCTTCTGGTATTTTTCTTGCTGAT 70 37 TTATTGCGGGATATCACTGCTCGGTTT 69 44 336 secG protein-export membrane protein Cell processes Transport/binding proteins 4.A.6 Other [104] Protein export none EC:4.2.1.70 YPO3500 ATGAGTAACCGTAAATACTTTGGTACAGATGGCA 68 38 TTAACCTGCTGCCTTTACTGCATCAGCAATC 72 45 255 mrsA probable phosphoglucomutase/phosphomannomutase Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3501 ATGCATCTAACTGCCAGAGGTCTGACGT 69 50 TTATCCCTTCGCTGAACGTGTTGCC 70 52 834 folP dhpS dihydropteroate synthase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.2 Folic acid [9] Folate biosynthesis none EC:2.5.1.15 YPO3502 TTGCAGTCGTCTTGATGTCTGTATTCCAGAGCTTT 73 43 TGTTCTGACACTGTATTGCCCGACGTTGGAGTAT 74 47 255 ftsH hflB mrsC tolZ cell division protein Cell processes 4.C Cell division [24] none YPO3503 ATGTCTAATAAAAAGCGTTCGGCTAGCTCCA 70 42 CTACAGTTTCCGCCCTGTCGCTACAA 69 54 630 ftsJ rrmJ mrsF ribosomal RNA large subunit methyltransferase J Cell processes 4.C Cell division [24] none YPO3504 ATGAATCTGAATAACAAACAAAAACAGCACCTGA 69 32 TTAACGCGGTAAAATAATTTTGCGTTCTTTCG 70 34 294 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3505 ATGAAACAGATTCCGATGACGGTACGTG 70 46 CATATTCAACGCTAAGAATTTCATATTCTACTTCG 66 31 477 greA transcription elongation factor Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO3506 ATGCATTTTTCACGAATTGTCAGTGGATTGGC 74 41 TTCTGATAAATATCTTTATAGAGGCGGCTCTCAAA 68 34 255 dacB penicillin-binding protein 4 precursor Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO3507 ATGAAATTACTGATTGTTGAAGATGATGAACTGCT 68 31 TCATGATAAGGCTTCCAATCGATAACCAATACC 70 39 663 basR pmrA two-component system response regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO3508 ATGCGCCGTCGTTTGCTGTTAATG 70 50 CTATCTCTGGCTGTAAGTGATCGCGGG 70 56 255 basS pmrB two-component system sensor protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3509 ATGAAGTTTGTAGATGAAGCTGCAATCCTGG 70 42 ATCCCAGTCGTCTTCAGCTTCCGC 70 58 255 none putative GTP-binding protein Other 5.I Unknown [1066] none YPO3510 ATGGATACGAAACAGCAGGCTGGTTTAGGTA 70 45 TTACTTTCTCCGTAAATCATTCACCGGCTG 70 43 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3511 ATGGCACATAAAAAGGCTGGTGGCTC 70 50 TTTCGGGCCTTTAACTTCGAACTTGACTTTA 70 39 234 rpmA 50S ribosomal protein L27 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO3512 ATGTACGCGGTTTTCCAAAGTGGTGGTA 71 46 TTAAGCGCTGATGCCGGTGATTTTAAC 70 44 312 rplU 50S ribosomal protein L21 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO3513 ATGAACCTAGAAAAGATTATCGAGTTAACCGCG 69 39 TCAAAAACGGCGGTGCACTGAGATAT 70 46 255 ispB cel octaprenyl-diphosphate synthase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] none YPO3514 AAAAAGAGTGGTTTGCCGCTAAGGAATTG 69 41 TTAATCCATTTCCAAACGTTCGATAAGGCTTT 70 34 348 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3515 ATGATTTTAAGGAAATCTGATTGGCACCCA 70 37 TTATGGCTGCGTTGTGGTTGGTCGTAT 71 48 276 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3516 ATGAAAGTTGCAGTTCTCGGTGCCG 71 52 TTATTGATTAACGAACTTCTCACCTAACTCGA 65 34 255 mdh malate dehydrogenase Energy Metabolism 1.B.3 Tricarboxylic acid cycle [15] Citrate cycle (TCA cycle). Pyruvate metabolism. Glyoxylate and dicarboxylate metabolism. Carbon fixation. Reductive carboxylate cycle (CO2 fixation) none YPO3517 ATGCGCAATCCCGCAAAGCA 71 55 TTAAAGCTCTTGTTCGAATAGCCTGAGAATAGCTT 69 37 471 argR xerA arginine repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO3518 ATGAATATTAAAACGACTGTTGCAACA 62 30 TTATTTGTAAATATTAGCGGTGGCA 61 32 264 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3519 ATGCGCATTCACATCTTAGGTATCTGCG 70 46 GCCAAATCCACCGTTGCTCATCA 70 52 255 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO3520 ATGAAAACGTTAGGCGAATTCATCGTCG 70 43 TTACTTGGCTTCTTCATCTGGGAATTTAGCG 70 42 255 fbp fdp fructose-1;6-bisphosphatase Central intermediary metabolism 1.C.2 Gluconeogenesis [5] Glycolysis / Gluconeogenesis. Fructose and mannose metabolism. Carbon fixation none EC:3.1.3.11 YPO3521 ATGAGCTTGAACCAAGTACCCGCAGGTA 70 50 CTATTTCTTAGCACGCTCGAAAGAAGAAAGGATTT 70 37 528 ppa inorganic pyrophosphatase Central intermediary metabolism 1.C Central intermediary metabolism [63] Oxidative phosphorylation none EC:3.6.1.1 YPO3522 ATGCGAATTATTGTTTACGGCAGTTTACGG 69 40 TTACGGCTTATCAATCTCTTCATGGCGC 70 46 357 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3523 ATCTGGCGTTGGGCCGTAATAAGCT 70 52 AATGCCTCACCGATTTTACCCACCA 69 48 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3524 CCACACCTATCGCCTATGCCGCCAAT 74 58 CGATGTAAAATTGCACGCCATGTGTCTCGTTAT 74 42 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3525 ATGCAAAACGTTGATAATACCGC 62 39 TTACACGTTAGGCGGCAGA 60 53 639 "msrA, pms" peptide methionine sulfoxide reductase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO3526 TTTTTAATTGCGGTCAGCGCCTTCTT 69 42 CTAGGCGTCACTGCTTTCGTGTGGT 69 56 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3527 ATGAGGATCTTCCAGCGTTATAACCCGG 70 50 TCAAGTCAGCAGGGTATCGGCCTG 70 58 213 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3528 AAAAATAGCCTGCTTATAATATCGCTGATATTCAC 66 31 TTATTGCTGCACAAGTTGGTGCAGTTG 69 44 564 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3529 ATGTTAGAGCAAATTGGCCAGTTGGCC 71 48 CTAAAATAACGAAACTCTGAAACCGGGGTTC 69 42 741 cysQ amtA inositol monophosphatase family protein Central intermediary metabolism 1.C.5 Sulphur metabolism [13] none YPO3530 ACATCACTGTCTGCTGCCACTGTTGATTTACGAG 74 47 ATTGCGCTTTTTGTTTAATAAAATCAGCGGCCTTA 73 34 255 cpdB 2';3'-cyclic-nucleotide 2'-phosphodiesteraseprecursor Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Purine metabolism. Pyrimidine metabolism none EC:3.1.4.16 YPO3531 ATGGATTACCGCAATCAGTCTCTGGG 69 50 TTATTCGCCCCTTAGCGCACGG 70 59 666 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3532 ATGACAACCCCTTCTTTTGATAGCGTTGA 69 41 TTACAGAATTTCCAACAGTTCCACTTCAAACATC 69 35 621 fklB FKBP-type peptidyl-prolyl cis-trans isomerase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO3533 ATGGGCAGAATCGCGCCC 68 67 TTAATGTTCGCGACGATAGCTACCATCGT 70 45 741 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3534 TGAAATATCAATTATCCTTTGTGTTACTACTCACG 65 31 TCATCGAGATGCTGACCCTGGC 69 59 456 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3536 ATGCAAGTTATTCTGCTTGATAAAGTAGCAAACC 68 35 TTACGCTTCTGGAACCACAACTACGTTCA 69 45 453 rplI 50S ribosomal protein L9 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO3537 ATGGCACGTTATTTCCGTCGTCG 68 52 TTACTGATGACGATCAGTGTACGGCAACA 70 45 228 rpsR 30S ribosomal protein S18 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO3538 GTGGTGACCACTAATCGTCTGGTACTTTCTG 69 48 CTAGTCTCCAGAATCTATAAATTCAATCTGCTCGG 68 40 321 priB primosomal replication protein n Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO3539 ATGCGTCATTACGAAATCGTTTTTATGGTCC 70 39 TTACTCTTCAGAATCCCCAGCTTCAGAATCA 70 42 393 rpsF 30S ribosomal protein S6 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO3540 ATGGGTTTGATTGAGCCATCA 63 43 TTACGGATTATTCAGCCTCCTG 60 45 279 none hypothetical protein Other 5.I Unknown [1066] none YPO3541 GTGTGGATCACTATTGCACCGT 62 50 TTATAAATACTGGGTAAAAAAATCACTTCCA 62 26 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO3544 TTGGGCCGTTGGTGGAGATATA 66 50 TCAATTCTTATACAAAGCGATTCGC 63 36 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO3545 ATGGCCAGAGATCGGGCATTAACG 70 54 TCACTTACCCAATAGCTTGGGGATCTCG 70 50 894 none lysR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3546 ATGATCACATGCAGAACAGCAGAACAGTG 70 45 CTAAACCGGTAAATCAATCAAGAGGGCG 69 46 705 rnpB conserved hypothetical protein Other 5.I Unknown [1066] none YPO3547 ATGAATCAACACGATCGAGCAGTAATTTCTG 69 39 TTACTGCTGAATGTCATCCTCTTCTGTTTCTACG 70 41 900 none putative tetrapyrrole methylase Other 5.I Unknown [1066] none YPO3548 CAAGATAATATTGATGGCACTTGG 60 38 CAATCTGATGATGCAGTTAAATCAC 60 36 1400 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3549 ATGAGCCAACGGGATACTGGCG 69 59 TCAATCCGTATTGAAAGCGTTGGGTAGC 70 46 354 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3550 GTGCTGGAAAGAATCAAAGGCTGCTTTACT 69 43 TTAATCGTTCTGATGAGGAAATAGAGTGTTGTCAA 69 34 591 none probable phosphosugar isomerase Other 5.I Unknown [1066] none YPO3551 ATGAAGGTTGGTTACATATTTGCCATGCTATTCA 70 35 TTATTTAACAATAGTGAAGGCCGTCGTGACG 70 42 576 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3552 ATGATCTCAGTCAGACGGGGGTTTAGTCA 70 48 TCAATCCAGCGTATTTTCCTGCAAGAAC 69 43 726 mtgA monofunctional biosynthetic peptidoglycantransglycosylase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO3553 ATGAAAACAGTTGGCGTAGTGCTCAGTG 69 46 TCATTCAGTTAAATCCAAGACTTTCGTCACCA 70 37 654 elbB elb2 enhancing lycopene biosynthesis protein 2 Other 5.I Unknown [1066] none YPO3554 GTGCGCGAAGACTGCGCCA 72 68 TCACTTAACCCGTTCTAGTAACAAAGA 61 37 195 none hypothetical protein Other 5.I Unknown [1066] none YPO3555 GTTCAAATGGCCGTCACCTTCGTCT 70 52 TGAATCCAGCACCGCCAAATAACCT 70 48 255 arcB aerobic respiration control sensor/responseregulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3556 TTGCTGCTTGGCCGCAACG 71 63 TTAACGATAGCAATAAGCATCCCCAATCG 69 41 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3557 GAAATCAACACCATCGCCGGTAACC 70 52 CGGGACACCTTATTGGTGCCGTAAC 69 56 255 gltB aspB glutamate synthase [NADPH] large chainprecursor Amino acid biosynthesis 1.D.1 Glutamate family [19] Glutamate metabolism. Nitrogen metabolism none NADPH YPO3558 ATGAGTCAGAACGTTTATCAGTTTATCGACTTACA 67 34 TTAGACTTCCAGATAATTCATGATGCCGTCTG 69 41 255 gltD aspB glutamate synthase [NADPH] small chain Amino acid biosynthesis 1.D.1 Glutamate family [19] Glutamate metabolism. Nitrogen metabolism none NADPH YPO3559 ATGAAATTTCACTTACCTTTTATTGTTGGCGGAT 69 32 TTTTTGAGCTCAGCCAGGCAGCTATC 69 50 486 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3560 ATGGAGATGTCGGATATGTCTCCGC 68 52 TTACTTAACCACGCGTAATGCCGGG 70 52 516 sspB putative stringent starvation protein B Other 5.I Unknown [1066] none YPO3561 ATGGCTGTCGCTGCCAACAAAC 68 55 TTAGCTCCGAGTTTTCAGATGCATTTCAC 68 41 642 sspA ssp pog putative stringent starvation protein A Broad regulatory functions 2 Broad regulatory functions [235] none YPO3562 ATGGCAATGGCTGAAAATCAATACTACGG 69 41 TTAACGTTTGGAGAACTGTGGACGACG 69 48 399 rpsI 30S ribosomal protein S9 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO3563 ATGAAAACTTTCACAGCTAAACCAGAAACTGTAAA 67 31 TTAAATGTCCAGAACTTGCGGTTGCTGT 69 43 429 rplM 50S ribosomal protein L13 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO3564 ATGCAACAGAGTTCACCTATAACGCTTTATCAGC 70 41 TTAAGGTAAATGGGGTAAAGAAAGGTACTCTTCGC 69 40 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3565 ATGACCTGGGAGTATGCGCTTATTGGA 69 48 TTAATCGCGATTCTGGTGTTCCGG 69 50 405 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3566 ATGAAGAAAACATCATTACTTCTTAGTGCGCTAGC 68 37 TAGCGGATTAATAAGTAAATATTATCTTCACCACG 65 31 255 degQ hhoA protease Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO3568 ATGCTGTGTCCGCCTAACTCATGCTATTC 70 48 TTAATCTGCTGCTTGGGTGGTCAGC 69 52 255 degS hhoB htrH protease Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO3569 ATGGATAAGTTTCGTGTGCAGGGGC 69 52 GCCTTTCACGCGTTCAATCTTCGCAC 73 54 255 murA murZ UDP-N-acetylglucosamine1-carboxyvinyltransferase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Aminosugars metabolism none EC:2.5.1.7 YPO3570 TGAATCTTATGGATACTAACGAAATTAAAGACGTG 66 31 TTAAAAGCCATTTAGTTTGCGATCCCG 68 41 264 none BolA-like protein Other 5.I Unknown [1066] none YPO3571 ATGGCGGGTGAGCTAAGCTGGC 70 64 CTAACTGGCCGTTTCCACAGGAATTATCTG 70 47 303 none putative anti-sigma B factor antagonist Broad regulatory functions 2 Broad regulatory functions [235] none YPO3572 ATGTTTAAACGTCTATTCATGGTCGCATTGTTG 70 36 CTATTTATCTAAGGTGATTGGCTGTTTAGCCGC 69 42 624 yrbC putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3573 ATGCAAACGAAGAAAAGTGAAGTCTGGGTAG 69 42 TTAAGGATGTTGAGCGGGAAGAGAAGGTAC 69 47 558 yrbD putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3574 ATGTTAGTAAAGTCGTTAGCATCTTTAGGTCGCCG 71 43 TCAGTTCCCAAACATCAGTGCTGTCAG 69 48 783 yrbE putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3575 ATGAAACAACTGGCATCGAATGTGATGA 70 39 TTACTTTGGGTATAACAACTCGGTTTTATAATCGC 68 34 819 yrbF putative ABC transporter ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3576 ATGTTTCTTGCGATAACACTATTAATCATTGGCTT 68 31 TTACAGCGCACTTATGGGAGCAAAAA 68 42 255 yrbG putative sodium/calcium exchanger protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO3577 ATGCTCAGGAAGGCTTGGAGCGA 70 57 TCAGACAACACCGGCTCTCAGCA 69 57 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3578 ATGAGCAACACCGCATATATAGACACATGCTAC 69 42 TCATATTGATAATCCTGTGGCCCCTTCG 70 46 564 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3579 ATGAGCAAGACAAGACGCTGGATAACACTG 70 47 TATTTTTGGATTTCATAAGAGGTTTTAACCTTTTC 65 26 564 yrbK putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3580 AATCCAAAAATAAAATAAGTCATCTTTTACTTGCC 65 26 TTACTTACTCTTCTTTTGGCCTGATGCTGCT 69 42 546 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3581 ATGGCAACATTAATCGCAGAAAAGCTGG 70 43 TCAAAGACGGAACTCTTCACCTAGATACACGC 70 47 726 yhbG probable ABC transporter ATP-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3582 ATGAAGCAAGGTCTGCAACTCAAGTTCAGCC 73 48 TCAAACCAACTGTTTACGTTGATTAGACGGAG 69 41 255 rpoN glnF ntrA RNA polymerase sigma-54 factor Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO3583 ATGCAGCTCAATATTACCGGTCATCATGTC 69 43 TTAGTTAATTCGATCAAAATATTGCTCAAGTTTGG 67 29 108 yhbH probable sigma (54) modulation protein(pseudogene) Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO3585 ATGACCAACGATCCAGCATTGCAATT 70 42 CTAGGCTATTTCTGGCGGTAATTCAGTAATAATCT 67 37 483 ptsN rpoP nitrogen regulatory IIA protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3586 ATGGTGCTGATGATTGTCAGCGG 68 52 TCATTGTTTACGTTTTTCCAAGGTACGATGG 70 39 855 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3587 ATGACTGTCAAACAAACCGTTGAGATCAAAAA 70 34 TTAATCTTCGTCAAATCCCGAATTAAACAACTCG 71 35 273 ptsO npr rpoR putative phosphocarrier protein Other 5.I Unknown [1066] none YPO3588 TATATGACTCGCGTACAGAAAGAGCGCCT 70 48 TTAAAGAGCTAATTCTGCGTTTAATACCAGTGCC 69 38 258 pyrB aspartate carbamoyltransferase catalyticsubunit Purines; Pyrimidines; nucleosides; nucleotides 1.F.2 Pyrimidine ribonucleotide biosynthesis [8] Pyrimidine metabolism. Alanine and aspartate metabolism none EC:2.1.3.2 YPO3589 ATGATGACTCAGGATTACAAACTTCAGGTTGAAG 69 38 TCAATCCGCGTGTAGTACGGTCAGG 69 56 468 pyrI aspartate carbamoyltransferase regulatory chain Broad regulatory functions 2 Broad regulatory functions [235] Alanine and aspartate metabolism none EC:2.1.3.2 YPO3590 ATGTTACGTGCTATCAAAACTAAACTCGCCCC 70 44 TTAACGACGTACGGCGATGGCTTC 69 54 387 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3593 GTGCACCGGGGTCATGGCC 71 74 TTACATCAGTGCATGTTGACCTGTCTGTACC 69 45 744 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO3594 ATGGCCGGTACAGACAGGTCAACATG 70 54 TTATTCCATTACACCAATCGTTACGCTGGG 70 43 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3595 AAAAACAACCAACGCTGTCATTGCG 69 44 TTACTCGCTATCCTTCATGCCTTGACGTAAG 69 45 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3596 ATGAACAACGCCAGAGGCTATCTCCTG 70 52 TTATTCTTCCTCTTTCCTTAGATCGACATCGTTTG 70 37 546 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3597 CCAACCAAAAATCGAGTGATTTGGCG 71 46 CTGCTCCTGATTGCCCAGAATTGCATGTC 74 52 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3598 ATGAAAACAGATGCTGTGACTGACAACACC 69 43 CTAGCTCAATAAATTGTTTAGCTGTTGCAAAA 66 31 768 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3599 AGGCCTACCCGAGTTTTTCCCCATT 69 52 TAGCTCGGGGTAGAGCCGTTCATTG 70 56 255 clpB2 Clp ATPase Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO3600 ATGAGACAACGGTTAAAGAGTGTCC 62 44 TCATAGCTGGCACCTGTATTTCG 63 48 none hypothetical protein Other 5.I Unknown [1066] none YPO3601 ATGAACACGTGGTTATTGATTAGCTCGTTACTGTT 69 37 TCACCAATGACATGCGTTACGCAG 69 50 687 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3602 ATGGATATCACGTCACAACATCCCTGG 69 48 GTCGCTGTTTTTCTGTCAGTAGAGCGATCAACG 74 48 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3603 CGATATCTTTACCCAATCTGCCGCG 69 52 TTAACAGCACCGGTTCAATCGCAAA 70 44 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3604 ATGAGTGACACCCCGCAACATATCATC 69 48 TCATTTGCTGTTGCAGCGGTTTG 69 48 783 none hypothetical protein Other 5.I Unknown [1066] none YPO3605 GTGCTGTGGGGCTTTGGTGCC 71 67 TTAACGGGCAGAGTTCGTCTGCTGC 71 56 624 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3606 ACTGCCGGTAAGCGCATTAATCAGG 69 52 CATGGGTGATCGTAATTCCGGCATT 70 48 255 none putative Rhs accessory genetic element Other 5.I Unknown [1066] none YPO3607 ATGCCAGAAAATAACATCAACACTTACTGTATTCA 67 31 TCAAACATGGCCGGCCTCC 68 63 459 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3608 ACCGTGGCCTGTAAAGATGACTCCG 70 56 ATACTGCTCTTCCACCAATTGCCCG 69 52 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3609 GTGGCGGCCGATCTGCTG 68 72 GACCTTAGCGCCTTAGGAATTCGGCCCTT 74 55 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3610 ATGAAAAATCCTTGTCAGAATTGTG 61 32 TTACTCTAAATCGTCTTCTTCGACCA 62 38 486 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3611 ATGCAGGATTTACGCCCGG 65 58 TTACAAAAGCATGTTCATTTTTTGAA 61 23 192 none hypothetical protein Other 5.I Unknown [1066] none YPO3612 ATGACTGACGTGATAGACGAGATTATGCAGAC 68 44 TCACTTCTTCTCTGGGTCAACTGGCTGT 70 50 408 none putative transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3613 GTGCGTCGCAGTACCTGCGC 69 70 AGAGCCAGAAGATTGCAGAATAATAGAGTCCG 69 44 159 none putative Rhs accessory genetic element Other 5.I Unknown [1066] none YPO3614 ATGTATTACTTCAACGAGGGTTCCCTCGAGTT 70 44 TTATGACCGCGCGTTTATTTGCAAC 69 44 423 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3615 TAATCCCAATGTGGGGAATATCGCG 69 48 CACCTGATCTTCCGCGATGATCTTG 69 52 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3616 ATGTGTACGGCTATAGCTATTTATGGTACTGAGAA 66 37 TTTTTAATTGTTGGCGGTTTCCAGGATATTAA 69 31 795 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3617 ATGATTAACGTTGGCATCTTTACCGGTTATTACC 70 38 TCAACTGCCTGTTGCCATTAAAACCTC 68 44 900 none hypothetical protein Other 5.I Unknown [1066] none YPO3618 ATGGATACATTAATTAGCCAATTAGAGCACGCAA 69 35 TCATTTTGCATTCTCCAGGAGTATTTCATTGA 70 34 255 none putative oxidoreductase Other 5.I Unknown [1066] none YPO3619 AAAAACATGCAACGAACGCAGGTCG 71 48 TCAGTCGTGACGGTCATTATCCAATTGC 71 46 879 none putative araC-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3620 ATGAGACCCGATAGAATCTTACACCCTGAACTT 69 42 CTAGGCGTTGAGTTCCGGTACGACG 70 60 504 none putative carbohydrate transport protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3621 ATGAGTGTATTTATTCTCGGCAGCTATGCGA 70 42 TTATTCCTCTTTCACGGTTATAGATCGCATAAAAG 68 34 255 none probable carbohydrate kinase Degradation 1.A.1 Carbon compounds [66] Pentose phosphate pathway none EC:2.7.1.15 YPO3622 ATGATTGATTTCAATGATCCCCGCC 69 44 TTAATAAGCGTTAATGTCGCCGGTTAGTCCTT 70 41 702 none putative deoxyribose-phosphate aldolase Purines; Pyrimidines; nucleosides; nucleotides 1.F.3 2'-deoxyribonucleotide biosynthesis [8] Pentose phosphate pathway none EC:4.1.2.4 YPO3623 ATGCGCGTTATCTCTTTGGCGG 69 55 TTAGGCAGCCGTTTGCTGAACCA 69 52 582 ssuE putative NAD(P)H-dependent FMN reductase Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO3624 ATGTCGCTATCTTTCTTCTTTCGTCGCG 70 46 TTATTTGGTCTGTGATTTTGCTGTAGATGATTGC 70 35 255 ssuA putative aliphatic sulfonates binding protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3625 ATGAGCATTAACGTATTCTGGTTTTTACCTACCCA 69 37 TCAGCTTTGCGAGACTTTTTGTGGC 69 48 255 ssuD alkanesulfonate monooxygenase Central intermediary metabolism 1.C.5 Sulphur metabolism [13] Benzoate degradation. Ethylbenzene degradation none EC:1.1.-.- YPO3626 ATGATGACAATCAGTGCACAACGAATTCTG 70 40 TCATTGCGCTTCTCCTGATTTTTGTTG 69 41 798 ssuC putative aliphatic sulfonates transport permeaseprotein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3627 ATGACCACACTGACTCATATCCCGCAA 70 48 TCAATTCGCCACCCGCCG 70 67 816 ssuB putative aliphatic sulfonates transportATP-binding protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3628 ATGGCTAATGCCAAAGCCCTTGG 68 52 TTACCAACCAAGATCACGTTTGAGCG 68 46 204 none putative DNA-damage-inducible protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO3629 AACCCTCAAGCACAGCCAAAGGGCA 74 56 CCAACCACCTGCGTAGAATGCAACCAGT 73 54 255 yjcD putative xanthine/uracil permease Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3630 GTATCGCTTTCTGGCGTTGTCACTCGAATGT 73 48 ATCAGCAACGCTTCCAGCAAATCCAAATCAT 74 42 255 yjcE putative putative Na(+)/H(+) exchanger protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO3631 ATGAAATCGTTAATACTCCTCTTAGCATTACTGAT 65 31 TTAGATACAAACCTGACCGTCATCATAAATAACAC 67 34 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3632 ATGTATCGCTATCGAGTTATGTCCTTATGCGTTAC 69 40 TTAATACAGCGAAGGTTCGCCAATGG 69 46 255 ddg putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3633 TGAAATTTAATCTCGCATTACTGAATGTATGTATC 65 29 TCAGAAGCCTAACGTTTTGGCATTATCTTTG 69 39 255 none putative periplasmic binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3634 CGCATTTATCACTCTTGAAAATATCAGCAAGCGAT 72 37 CACCTCGGCGATCTGTTGTTCGGTACAC 74 57 255 none ABC transporter ATP binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3635 ATGGATAAGCTAAAACTGCGCCAACTCAC 69 45 TCAGTGCTCCCTCAACAACTTGCG 69 54 255 none putative branched-chain amino acid transportsystem; permease component Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3636 ATGACCTGGTTAAACCGAACTATCCCCG 70 50 TTAGGCTTTACGATTCTGTAATGCGATAAAGAGGA 70 37 255 none putative ABC transporter; permease protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3637 GTAGACGTAGGGACCGGCAGTGCAAGA 72 59 CCTCCTGCATCAGTGCCTGATAGCGCATAT 74 53 255 none putative carbohydrate kinase Degradation 1.A.1 Carbon compounds [66] none YPO3638 ATGAGCCAGAATAAGGAGTGGCTGGC 70 54 TTATTGCTGCTTACGTAACACCATCCCG 69 46 606 none putative phosphosugar isomerase/binding protein Other 5.I Unknown [1066] none YPO3639 ATGATGAAAGATAACGAATACCAACCGCC 68 41 TTACTTTATGAGTCGGTCAAAATCTGCTGCA 69 39 855 yghU putative glutathione S-transferase Other 5.I Unknown [1066] none YPO3640 ATGCACATGAGCAAATTCCGGTTG 69 46 TTACTGACTCAATAACGCTTTCACATCCAGTAAGA 69 37 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3641 AAAAACTCATTAAACGGCTGGAGATCATCAAAAG 70 35 TTATGCTTCATAGAGCACTCTTGATGCTTCCTC 70 42 255 none hypothetical protein Other 5.I Unknown [1066] none YPO3643 ATGTCTAATAAAATGACTGGTTTAGTAAAATGG 62 27 TTACAGCGCAATAACGTTTACCG 63 43 213 cspa2 major cold shock protein Cspa2 Other 5.F Adaptions and atypical conditions [36] none YPO3644 TAATAAAATGACTGGTTTAGTAAAATGGTTTGACG 66 29 TTACAGGGCGATTACGTTTACTGCTGAGG 70 48 213 cspa1 major cold shock protein Cspa1 Other 5.F Adaptions and atypical conditions [36] YPO3643 YPO3645 ATGAAAAAACCATTCATGTTATCTATGTT 60 24 TCACGGAGAAGGGATATCTATGAT 60 42 165 none hypothetical protein Other 5.I Unknown [1066] none YPO3646 ATGAATAAGCTGGCCATTGCCGTTG 70 48 TTAGCGAGGAGAAACCGTGACGGTAC 69 54 468 pcp pcpY slyB outer membrane lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3647 ATGTCTGCATCCCATGAGAATTACCGG 70 48 TCACGTCCACTGAGTGAGGGGG 69 64 813 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3648 ATGAAACAACTACAACGTATTGGTTTTATTGGT 65 30 CTATGGCTCCTTGTCGATCAACAGCC 69 54 891 none putative 2-hydroxy-3-oxopropionate reductase Degradation 1.A.1 Carbon compounds [66] Glyoxylate and dicarboxylate metabolism none EC:1.1.1.60 YPO3649 ATGATGGTAGCTCAAGATCGTTTTGAACGG 70 43 CTAACTGTCAGCAATCTCATCGTCATACGCTT 70 44 399 none putative gamma carboxymuconolactonedecarboxylase Degradation 1.A Degradation [18] Phenylalanine metabolism none EC:4.1.1.44 YPO3650 ATGGAAACCTTAAGTGCTGACTCTGCTATTACAGC 70 43 TTAGCCCGCTGACGAGGTAAAATCG 69 52 255 none putative metabolite transport protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3651 ATGCTAGCGGGAATGGGTGTGATTAAAC 69 46 CTACGTCGCGTTGGTCTCCTCAAGG 70 60 663 none putative GntR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3652 AAAAACTTAGCACGTTAATTGGCAAGATTCATACA 69 31 TTATTCTATTAATGGCATCAGTGATATCAACAAGC 67 31 477 none hypothetical protein Other 5.I Unknown [1066] none YPO3653 TTGGCTGATCTCTATAATCCTGACTC 61 42 CTATTTATTTAGAGCGTCCTGATTTAGTTT 60 30 120 none putative colicin immunity protein Other 5.B Colicin-related functions [10] none YPO3654 ATGTTCGAACAACGCGTAAATTCTGACG 70 43 TTTTTCAATTTCTTACGCAGCGTACCGC 70 43 297 fiS DNA-binding protein Fis Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO3655 ATGCGTATTGGACACTTCCAGC 64 50 TTACGCAAGATTTTCGAAATATGC 62 33 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3656 ATGGCCCCGATACCGGCG 70 72 TTTTTGATACCGGTAATGCGGCACC 70 48 255 prmA ribosomal protein L11 methyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] none YPO3657 CAAACTGATGTCGTTCTGCCGTTAGTCGGCTAT 74 48 TTAATCGGCACTGACGATGGCG 69 55 255 panF sodium/pantothenate symporter Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO3657a ATGGAAACAAGATTCCTACAGGCAAACAAAGA 70 37 TCAGTTTGCATCGTCATCCTCCAGTG 70 50 243 yhdT putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3658 ATGCTTGATAAAATCGTAATCGCTAACCGC 69 40 TTTTTCTCCAGATAGTGGATATTAGTCCCACCGTG 71 43 255 accC fabG biotin carboxylase 1.H Fatty acid biosynthesis [33] Fatty acid biosynthesis (path 1) none EC:6.3.4.14 YPO3659 ATGATGGGTATAATTGCAACACACAAAGAGTACG 69 38 TTATTCGATGACGACAAGAGGCTCGTC 69 48 510 accB fabE biotin carboxyl carrier protein of acetyl-CoAcarboxylase 1.H Fatty acid biosynthesis [33] none YPO3660 ATGTCGGATAAGTTTCACATTTTGCTTCTGAA 69 34 CTAGTTGGATTTTGACAAGCGATTTACCGC 70 43 453 aroQ putative class II dehydroquinase Amino acid biosynthesis 1.D.4 Aromatic amino acid family [19] "Phenylalanine, tyrosine and tryptophan biosynthesis" none EC:4.2.1.10 YPO3661 ATGCGGCTCAGTTTACGACACATCAC 69 50 TTAGCGGAACCATTGACGAAATTTTT 66 35 621 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3662 CTCATACTAAAAACAATACTCAGGCTAAAAACAGC 65 34 TTAGAAATTCTTCCGCAAATCTAAACCACGA 69 35 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3663 ATGCGAGCACTGATACTTGAGCAAATTGA 70 41 TCAGCGGACTTTGACTAAGGTACGCC 69 54 255 yhdH probable zinc-binding dehydrogenase Other 5.I Unknown [1066] none YPO3664 TATGTGTTTAGTCTTATTGGGCAGCACGATCAGCT 73 43 AGCAAAGAAATTGCCCTGTCCGCCGTA 74 52 255 yhdA putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3665 ATGTTTAAGAAATTTCGTGGCATGTTTTCCAA 70 31 CTATTCTTCGCTGAACAAATCGCCGC 71 50 255 mreB envB rodY rod shape-determining protein MreB Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO3666 ATGAAGCCGATTTTTAGTCGGGGTCC 70 50 TCACGGCGAAACTCCTGGTGTG 69 59 255 mreC rod shape-determining protein MreC Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO3667 GTGAATCGTTACAGTAGTCATGGTCGCTGG 70 50 TTATTGCACCGAAAATTGGCGGC 70 48 489 mreD rod shape-determining protein MreD Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] none YPO3668 ATGCCCATGACTGCCCTGTATCTGG 70 56 TCAGCTGTCATGTATTCCTCTCACATTACGC 70 45 600 yhdE putative inhibitor of septum formation Other 5.I Unknown [1066] none YPO3669 AAACGCGTGTTGCTTATATTGATGGCGG 72 46 CATCATCACCACGTCAAACTGTTCTTGGTTATACA 72 40 255 cafA rng ribonuclease G Macromolecule metabolism Degradation of macromolecules 3.B.1 RNA [13] Aminosugars metabolism none EC:3.1.4.- YPO3670 ACCTTTTACCCCAGAACTGCTGGCC 69 56 TGGCTTCTGCAATACCGTAGGCTCC 70 56 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3671 ATGAAAAATGCCAATGTTGCATTATTGCAG 70 33 ATTAGATGGTGGTTTATTCAATAATGGTTTATTCA 65 26 870 none putative carbon-nitrogen hydrolase Other 5.I Unknown [1066] none YPO3672 ATGAGCCTCTCATTTGTCAGTGAGCAGTTACT 69 44 CTACGCCGTGCCGCCCA 70 76 255 tldD putative modulator of DNA gyrase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO3673 ATAGCGCTGAACAGGTGATCCTCCG 70 56 TCTCTGATAATCCCAACCGCCTTGG 69 52 255 none putative insecticidal toxin Cell processes 4.I Pathogenicity [38] none YPO3674 CCGCTATCAATACAGCCTCAGCGGT 70 56 TTCAGAAGAACCGGAAGAACCGGAA 69 48 255 none putative insecticidal toxin Cell processes 4.I Pathogenicity [38] none YPO3675 ATGCTACCCATGATCAGCTTGAGCACC 70 52 TCATTTACCGTCACTGAAGGACTGCTGC 70 50 369 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3676 ATGATGAATGACAAACCCACGTTTCGC 71 44 TCATGGGTAGCATTCTCTGGGCAGC 71 56 402 none putative phage-related protein none YPO3677 ATGCACGTCCAGGTACCCA 62 58 TTATTTACTGTGGCTGAAAAAGCG 62 38 303 none putative phage-related protein none YPO3678 CGGGCTACTTTAGCCGTGATCCTGA 70 56 AGCGGGAGGCATCACCATAGTCAGT 69 56 255 tcaC insecticidal toxin complex Cell processes 4.I Pathogenicity [38] none YPO3679 CGTGATGGGAATGGCAACTTGCTAA 69 48 GCTAGTTGCATTAGGGAAGCGCAGC 69 56 255 tcaB insecticidal toxin complex protein TcaB(pseudogene) Cell processes 4.I Pathogenicity [38] none YPO3681 CCAGAACAGATCTTTCACTGGCCGA 69 52 ATCCCAATGGTATGCGTCTGCCAAA 70 48 255 none putative insecticial toxin Cell processes 4.I Pathogenicity [38] none YPO3682 AAATTTACTCGTATTCTTTACTACGGTTCAAGAGG 66 34 TTTTTCTCTGCCTTCTGCCACTGCA 70 48 867 none putative lysR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3683 AAACAGATGTCTGTTTTTGCGAAGGTGGT 69 41 TTAGCGATAATCCTGATAAACATCAGCTACCCG 70 42 255 none probable lysR-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3684 ATGAGTTTGCTTCCGGTGATGGTGATT 70 44 AAAAAGACGGGATGTTAAATAAAACAGGCAACA 70 33 204 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3685 GTGAGTACATTTTCATTAAAAATAATCCGCGTTGG 70 34 TTAGCCAAACTCACGTAGACGATGCATCA 70 45 255 yhcQ putative HlyD family secretion protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3686 CTGAGTTTTGCCATTGTGGCGGCATTATTTCT 74 44 CAGCCTGATAATCCACCAATTTCTGTTGATATTG 70 38 255 yhcP putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3687 ATGCTCACCCGCATACTGGGGC 71 64 TTAATTTATGCAAACTTCATTTTCACCCGCG 71 35 492 none putative succinate-semialdehyde dehydrogenase(pseudogene) Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO3689 ATGAATAAACGACTGATGGCCATACTGGG 69 45 TTACTCCATCCGAATGAAATGCTTATAGTGATCTT 68 34 474 none putative ribonuclease Macromolecule metabolism Degradation of macromolecules 3.B.1 RNA [13] none YPO3690 ATGGTAAAGGTGGTATTCGATTTTAACCATATACC 67 34 TCAAACAATATGCTCATCAACGACATTAAAATGT 68 29 282 none putative ribonuclease inhibitor Other 5.I Unknown [1066] none YPO3691 ATGAACAAACAGCCCGAAGATTGGCTA 70 44 TTTTTCAGCCAGTTCACGTAAATACGAGAAAATC 70 35 549 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3692 ATGAAAGTAGTCACTCAAGTTGCAGAACAGCG 70 44 TTATTCGCCCGCGATTTTCATAACGGG 73 48 255 pmbA tldE Putative modulator of DNA gyrase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO3693 ATGATTATGCCGGTATTGATTCGGGG 69 46 TCAACAATACTGCGATATTTTCTCTCTATTCTCAG 66 34 645 none hypothetical protein Other 5.I Unknown [1066] none YPO3694 ATGGCATTAATCACCGCCGCG 70 57 TCAGCGGTACTTTTTGTGATAGGTATTGCG 69 43 372 none putative cytochrome Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO3695 ATGACCAAGCCAACCATCACGATTAAC 68 44 TTAGCGGTGATATTCGCCCGCTG 70 57 411 rnk regulator of nucleoside diphosphate kinase Broad regulatory functions 2 Broad regulatory functions [235] none YPO3696 GGCAACATGGTGTCATCTATCAGATTTACCCGA 73 45 TAAATCCCCTCATATCCGCGTAATATCATATCTTG 69 37 255 treC olgH putative trehalose-6-phosphate hydrolase Degradation 1.A.1 Carbon compounds [66] Starch and sucrose metabolism none EC:3.2.1.93 YPO3697 AGTAAAACAGCAGGATATCGATCAACTGATCGTTC 71 40 GCAATTCGCCACGACGCTCTTTACGCTTATA 74 48 255 treB PTS system; trehalose-specific IIBC component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3698 ATGCAAAACCGTTTGACCATTAAAGATATTGC 69 34 TCAGACGAGTTGGCCCGGAATAATAATTT 70 41 255 treR trehalose operon repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO3699 ATGAAACTGCGCACTTGGTT 61 45 TCAGTGGGGGGGAGCATCG 69 68 477 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3702 GTCCGCTATATGATGGCAAACA 62 45 CTATTCTGGTTTTTTCTGCTGCTC 61 42 315 none insertion element IS1661 DNA-binding protein (partial) Other 5.A IS elements; Phage-related functions and prophage [210] none YPO3704 ATGTCGTTCGAAAAGTATTTCAGGGACGAGC 72 45 AAAGCGTGACATTGTAGAATATATCCATTATTACA 65 29 255 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO3705 ATGGCCGCGCTTCTTAATTGGG 69 55 TTATGTTTCCTGGTTAAAGCAGTAACGGCG 70 43 441 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3706 AAAATACCGTTTTAGCGGCAGAACCTGCCAGT 74 47 TTATTCCTTATCCAAACGGCCAACCAGT 69 43 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3707 ATGAACGAAGCAAATATCAGTCTGAGTTTCAATGT 70 34 CTATGCCACTGACGCTTCCAGTAGTTCC 69 54 183 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3708 ATGCCAACTCCAGCTTATATCTCTATCACAGGG 70 45 TTACGCTTCGATCGGCGCAC 68 60 519 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3709 ATGACTGGATCCTCGCTTGTT 61 48 TTAACGCCACAAAATAATCTCCG 62 39 339 none hypothetical protein Other 5.I Unknown [1066] none YPO3710 ATGAAAAAGAATCTGCTGTCACTCTGTCTGGTACT 69 40 TTAACCCTTGCCTTTTACACTACCAATAAAGGTTT 68 34 255 malM molA maltose operon periplasmic protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3711 ATGATTACTCTGCGCAAGTTACCAATAGCACTG 70 42 TTACCACCAGGCTTCGAATTGCGCA 73 52 255 lamB malB maltoporin Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3712 ATGGCTAATGTAACGCTGAGCAGCG 69 52 CTAGACGCCCAGTTCTTGGTACAGCC 68 58 255 malK maltose/maltodextrin transport ATP-bindingprotein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3713 GTGCGACTCATTATTACCCTGTTG 62 46 TTACTCCTTTGCTTGCGCA 61 47 237 none hypothetical protein Other 5.I Unknown [1066] none YPO3714 ATGACTCGCAGCTTCACGAAATCCG 71 52 TTACTTCGTGATACGGGTTGCCGC 69 54 255 malE maltose-binding periplasmic protein precursor Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3715 AAAAAGAAAATCGCCTGGTGGCAGAGTGAT 72 43 CATTTTGCTGGCTTTCAAATTCAGTATCGCGA 74 41 255 malF maltose transport system permease protein MalF Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3716 ATGCAGATGGCTATGGTTCAACCTAAATCC 69 43 TTAACCTTTCACACCACCTGCCGTTAATC 69 45 897 malG maltose transport system permease protein MalG Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3717 ATGGCTAAAAATTCGCGTTCTCAGTGGAT 70 41 TTATTCGCGCTTTAACCGCTCAGTATTCG 71 45 408 yjbA putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3718 CTAGTCAAACCGCTGCCTGGAAAGCGTTA 73 52 TGGTTGAACTGTCATGACTGGTCACTTCTTGGTC 74 47 255 pgi glucose-6-phosphate isomerase Energy Metabolism 1.B.1 Glycolysis [12] Glycolysis / Gluconeogenesis. Pentose phosphate pathway. Starch and sucrose metabolism none EC:5.3.1.9 YPO3719 CCCCCAACAGACCCGCGA 70 72 AATGTAGCGTTTGTACGACTTTGTCAGCGTCATTA 72 40 255 lysC apk lysine-sensitive aspartokinase III Amino acid biosynthesis 1.D.2 Aspartate family [24] "Glycine, serine and threonine metabolism. Lysine biosynthesis" none EC:2.7.2.4 YPO3720 AGGGACAGAAAGAGCTGCGCCTGCAAATA 74 52 CCAGAATTTGTGTTGGATCGTTAATCTTCGATGG 73 41 255 shlB hpmB hemolysin activator protein Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO3721 ATGGCATCACCTGTAATGGCTGTGG 69 52 TGAGCATTCACACCCACGGTCTCTT 70 52 255 none hemolysin Cell processes 4.I Pathogenicity [38] none YPO3722 GGTGATGATTTCCGGCACCATTACC 69 52 CGTATCCGATAGCAACGCGGATACC 69 56 255 metH 5-Methyltetrahydrofolate--homocysteinemethyltransferase Amino acid biosynthesis 1.D.2 Aspartate family [24] Methionine metabolism. One carbon pool by folate none EC:2.1.1.13 YPO3723 ATGGACCATGGGGGCCCC 69 72 TTATTTAACCCCGGTTCCCCCACC 69 54 594 iclR acetate operon repressor (pseudogene) Broad regulatory functions 2 Broad regulatory functions [235] none YPO3724 AGACCATTTTGCAGGGATTTGATGCGCAATAT 74 41 GGAGAAGCGTTGCTTTCGTCTATAAGCAAAAACAT 72 40 255 aceK isocitrate dehydrogenase kinase/phosphatase Energy Metabolism 1.B.10 Glyoxylate bypass [3] Aminosugars metabolism. Thiamine metabolism. Riboflavin metabolism. Vitamin B6 metabolism. Nicotinate and nicotinamide metabolism none EC:2.7.1.116 3.1.3.- YPO3725 ATGACGATCTCTCGTACTCAACAAATTCAGCA 70 41 CTAAAACTGCTGCTCTTCCGTCGAACC 69 52 255 aceA icl isocitrate lyase Energy Metabolism 1.B.10 Glyoxylate bypass [3] Glyoxylate and dicarboxylate metabolism none EC:4.1.3.1 YPO3726 AGAGTTAGTTTTCACCCAGCCTTTTAATGCTGCTG 72 43 CGTCAGGAAGTCGATAAGCTCGTCTTGTGTTGTAA 73 46 255 aceB mas malate synthase A Energy Metabolism 1.B.10 Glyoxylate bypass [3] Glyoxylate and dicarboxylate metabolism. Pyruvate metabolism none EC:4.1.3.2 YPO3727 ATGCCAATTCGGGTTCCTGATGAATTAC 69 43 TCAATCAAGGGTAGGATTCATATGTCGCAA 70 40 255 metA 5SrRNA 5SrRNA 23S_rRNA 16S_rRNA homoserine O-succinyltransferase Amino acid biosynthesis 1.D.2 Aspartate family [24] "Sulfur metabolism, Methionine metabolism" none EC:2.3.1.46 YPO3728 GTCCAATCCGCCGTGCTCTACTCAGTGT 73 57 TTAATGACGGAAATGGCGCATGTC 68 46 255 purH bifunctional purine biosynthesis protein PurH[includes: phosphoribosylaminoimidazolecarboxamideformyltransferase and IMP cyclohydrolase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism. One carbon pool by folate none includes: phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10 YPO3729 ATGAATATTTTGATAATTGGTAACGGCGGTCG 70 37 TTACTTACCGCGAGCAATCGCTCGATA 70 48 255 purD phosphoribosylamine--glycine ligase Purines; Pyrimidines; nucleosides; nucleotides 1.F.1 Purine ribonucleotide biosynthesis [18] Purine metabolism none EC:6.3.4.13 YPO3730 ATGCAGCGGGTGCTGATAACCTTC 69 54 TTACAGGCTGCCTGCCTGAGGTTC 69 58 654 yjaH putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3731 ATGAATAAGACTCAACTGATTGACGTAATCGCG 70 39 CTATGACTTAACAGCGTCTTTCAGTGCCTTACC 69 45 276 hupA DNA-binding protein HU-alpha Other 5.F Adaptions and atypical conditions [36] none YPO3732 ATGTTACGTAATCCGATTCATCTACGGCTCG 71 45 TTATTGCGTTAAATTTATGCCAATGTTGCTAACAG 69 31 591 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3733 ATGGTGAAGACTAAATCGAGGGTTGAGACTAAATC 69 40 TTAAATCATATCCCTACGCTTGCCAAGAAAATC 69 36 741 nfi endonuclease V Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO3734 ATGAATGAGTTGAAAAACGATCGCTATCTGC 70 39 TTATTTTTGATGATAAGGCCGTGATAGCGC 70 40 255 hemE uroporphyrinogen decarboxylase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] Porphyrin and chlorophyll metabolism none EC:4.1.1.37 YPO3735 GTGCGTCCAATCATAACTCAGA 60 45 TCAACCGACTGAACTCGAGATAT 60 43 786 none hypothetical protein Other 5.I Unknown [1066] none YPO3736 ATGGAACTACAACTTACAGGTAAAGAAAGTGGCTG 68 40 CTATTGGCTTAAATCGCTATGTTCACGACATAAGA 69 37 783 none conserved hypothetical protein Other 5.I Unknown [1066] Starch and sucrose metabolism. Folate biosynthesis none EC:3.6.1.- YPO3737 ATGCTCAACCGACTGGAAAGCCTG 69 54 TCAGTTGACCTGGCTCTTTTTATCCGC 69 48 510 rsd regulator of sigma D Broad regulatory functions 2 Broad regulatory functions [235] none YPO3738 TTGTCGGAGTGCCTAGCACC 64 60 TTAGACATAGCAATTCCTACCAGTGTG 62 41 261 none hypothetical protein Other 5.I Unknown [1066] none YPO3739 GTCACACCCACGTAAAGGCACACCT 69 56 CTCATTATTGGCCTCCGCACTCAGA 69 52 255 thiC thiamine biosynthesis protein ThiC Biosynthesis of cofactors; prosthetic groups and carriers 1.G.8 Thiamine [11] none YPO3740 ATGAGCCAACTTGATGCCCTCTCTCC 70 54 TCATTTTTCATCAGCCAACTCCTTACCCTC 70 43 675 thiE thiamine-phosphate pyrophosphorylase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.8 Thiamine [11] Thiamine metabolism none EC:2.5.1.3 YPO3741 ATGAAAAATGACCAGACGCTAAGTGACAGTG 69 42 TCACAACCCACCTCCACACGC 68 62 798 thiF thiamine biosynthesis protein ThiF Biosynthesis of cofactors; prosthetic groups and carriers 1.G.8 Thiamine [11] none YPO3742 GTGAAGACCAATTACATACCAATCATGCTCAATG 70 38 TCATCCTCCGGCAATGGCTTG 69 57 216 thiG thiamine biosynthesis protein ThiG Biosynthesis of cofactors; prosthetic groups and carriers 1.G.8 Thiamine [11] none YPO3743 ATGTCTGAAGACTTCAACCAGCGCTG 68 50 TTATCGCAATGAACGGCCTAAATGGCTAT 70 41 255 thiH thiamine biosynthesis protein ThiH Biosynthesis of cofactors; prosthetic groups and carriers 1.G.8 Thiamine [11] none YPO3744 TTGTTTTTAGAGTCAATGTCGTCCC 63 40 TCAGTGAGTTACACCACTGGCTG 63 52 114 none hypothetical protein Other 5.I Unknown [1066] none YPO3746 GATCCGTTCATGGTCATTCGGTGAA 69 48 TTAGCAACACGTTCGTTAGCCGCAG 69 52 255 rpoC tabB DNA-directed RNA polymerase beta' chain Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] RNA polymerase none EC:2.7.7.6 YPO3747 ATGATCAACGCCAAGCCTATCTCGG 70 52 GACAAACGTTGTCGCCCAGATCGTA 70 52 255 rpoB groN nitB rif ron stl stv tabD DNA-directed RNA polymerase beta chain Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] RNA polymerase none EC:2.7.7.6 YPO3748 ATGTCAACTATCACTAAAGACCAAATTCTGGAAGG 68 37 TTACTTGATCTCAACAGAAGCACCAGCTTCTTC 70 42 369 rplL 50S ribosomal protein L7/L12 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO3749 ATGGCACTAAATCTTCAAGGCAAACAAGC 69 41 TTAAGCAGCTTCTTTCTGATCGCGCA 70 46 498 rplJ 50S ribosomal protein L10 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO3750 ATGGCTAAGCTGACCAAGCGCATG 70 54 TTAGTTCACTACTGCAGTCAGGCCGCTTT 70 48 705 rplA 50S ribosomal protein L1 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO3751 ATGGCTAAGAAAGTACAAGCCTATGTCAAGCTG 69 42 TTAACCCTCCACTACCAGGCCCATG 69 56 429 rplK relC 50S ribosomal protein L11 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO3752 ATGTCTGAAGCACCCAAAAAGCGTTG 69 46 TCAGCCTTTTTCTACCTGACTGAAATCCAATT 69 37 546 nusG transcription antitermination protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO3753 ATGAGTGCGAATACCGAGGCTCCA 69 54 TTAGAACCTCAGGCCAGTAATAAATGATACCAAGC 69 40 384 secE prlG preprotein translocase SecE subunit Cell processes Transport/binding proteins 4.A.6 Other [104] Protein export none EC:2.7.7.6 YPO3754 TCTAAAGAAAAGTTTGAACGTACAAAGCCGCACGT 73 40 TTATTCAATGACTTTAGCAACAACGCCAGC 69 40 255 tufA tufB elongation factor Tu Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO3757 ATGAAGATAGTTTTGCTTAATGCCGCAACTTTC 70 36 ATGATAGTTACCATTAGGAGTGCAGGCATAGTCAG 69 43 486 none putative acetyltransferase Other 5.I Unknown [1066] "Valine, leucine and isoleucine degradation. Lysine biosynthesis. Lysine degradation. Histidine metabolism. Tyrosine metabolism. Phenylalanine metabolism. D-Arginine and D-ornithine metabolism. Aminosugars metabolism. Lipopolysaccharide biosynthesis. Glycerolipid metabolism. Benzoate degradation. Ethylbenzene degradation. Butanoate metabolism" none EC:2.3.1.- YPO3758 ATGACAAAAAGAGAACAATCTTTAGCGACGC 69 39 TTATTTTCTTAAGCGTACACTTTCTACTGCATGA 66 32 255 coaA rts panK pantothenate kinase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.5 Pantothenate [4] Pantothenate and CoA biosynthesis none EC:2.7.1.33 YPO3759 GTGAAAGATATCAGGGTCCCCTTACGGTTAGT 69 47 TCAGACACCTCGAAGGGATATCTCACC 68 52 255 birA bioR dhbB bifunctional protein BirA Broad regulatory functions 2 Broad regulatory functions [235] none YPO3760 ATGTCGAATCAGCGTTCCTCTCTAAAACACC 70 45 TCACGATAAATGCTCCACAGCATTAACTTCA 70 39 255 murB 5SrRNA 23S_rRNA 16S_rRNA UDP-N-acetylenolpyruvoylglucosamine reductase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Aminosugars metabolism none EC:1.1.1.158 YPO3761 ATGAAAATACTAATACTTTACTCCAGCCG 61 34 CTACTTTTTATACTGCAGTGCCAAGA 60 38 534 hemG protoporphyrinogen oxidase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] Porphyrin and chlorophyll metabolism none EC:1.3.3.4 YPO3762 GCATTTTCGTGCCATAACCCGTATTGTTGGT 74 45 ATGTTGGGGTGAAAAGGACTAGCAAAGTGAAGACT 72 43 255 trkH Trk system potassium uptake protein TrkH Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO3763 CCTTATCTGATACCCGCTATGC 60 50 TTCCACCTGTGGGACTTTATATTT 60 38 402 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO3765 ATGGAAACGCTGGCTTCTTTATATAACGAACATT 70 35 TCAGGCCAGTTTCAGATCACGCG 70 57 255 pepQ proline dipeptidase Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO3766 AGGTGGAGGATGTGAATGTATTTT 60 38 CAAATCGTTGGTTATCAAACATCA 61 33 1403 "fadB, oldB" fatty acid oxidation complex alpha subunit Degradation 1.A Degradation [18] "Fatty acid biosynthesis (path 2). Fatty acid metabolism. Valine, leucine and isoleucine degradation. Lysine degradation. Tryptophan metabolism.Tryptophan metabolism. beta-Alanine metabolism. Benzoate degradation. Propanoate metabolism. Butanoate metabolism" none EC:4.2.1.17 1.1.1.35 YPO3767 ATGGAAAATGTAGTCATTATTGATGCCGTGC 70 39 CTATAAGCGCTCAAATACGGTAGCAATACCTTGC 70 44 255 fadA oldA 3-ketoacyl-CoA thiolase Degradation 1.A Degradation [18] "Fatty acid biosynthesis (path 2). Fatty acid metabolism. Bile acid biosynthesis. Valine, leucine and isoleucine degradation. Phenylalanine metabolism" none EC:2.3.1.16 YPO3768 ATGACAACTTTAAGCTGTAAAGTAACCTCCGTAGA 67 37 TTAGATAAAGGCAAAAGCATCACCAAAGATATGTT 68 31 702 fadI fre flrD fsrC ubiB NAD(P)H-flavin reductase Energy Metabolism Respiration 1.B.7.c Electron transport [33] none YPO3769 ATGAAATACCGTGACTTACGTGACTTCCTCTCAT 70 41 TTAGCGTTTCGCGTCTTTGTCACTGAA 70 44 255 none conserved hypothetical protein Other 5.I Unknown [1066] Ubiquinone biosynthesis none EC:4.1.1.- YPO3770 ATGAAATCTTGGTATTTATTGTATTGTAAACGCGG 68 31 TTATTGCTTTTCGAACTGACGATTGTCCAG 70 40 489 rfaH hlyT sfrB putative regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3771 ATGAGCTATGCATTTCCGGGCACC 70 54 TTAGCGCTGCATCTGGTCATCATGTAG 69 48 255 hemB ncf delta-aminolevulinic acid dehydratase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] Porphyrin and chlorophyll metabolism none EC:4.2.1.24 YPO3775 GTGGATCACTTTTCATCCGTCG 64 50 TCAAACCAGCCGGAAAACCCG 70 57 "tatD, mttC" deoxyribonuclease TatD (pseudogene) Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO3776 ATGGCTGTTGATGATACCCAACCCCT 70 50 TTAAGGTGCTTTCGGATGGCTATCTATACCTTC 69 42 777 tatC mttB Sec-independent protein translocase proteinTatC Cell processes Transport/binding proteins 4.A.6 Other [104] Protein export none EC:3.1.21.- YPO3777 GTGTTCGATATCGGGTTTAGTGAACTGCTACTG 70 45 TTACTGATCGCCGCCAGGTTGG 70 59 663 tatB mtta2 Sec-independent protein translocase proteinTatB Cell processes Transport/binding proteins 4.A.6 Other [104] Protein export none EC:3.1.21.- YPO3778 ATGGGCAGTATCGGTTGGGCAC 69 59 TTATCCCTGTTCTTTTTCGTGACTCTTAGATTCTT 67 34 267 tatA mtta1 b3836 Sec-independent protein translocase proteinTatA Cell processes Transport/binding proteins 4.A.6 Other [104] Protein export none EC:3.1.21.- YPO3779 GCCAGGAGAACTTCGGCGCCTGTATTTAATTAT 73 45 GATAAACCAAGCCAATGCACCGGCAAC 73 52 255 aarF ubiquinone biosynthesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] none YPO3780 ATGGCTATGTCACTAAGAACACTAATGCTAAAGCC 68 40 TTATTTTGTCTCCATAGTTGCCAATCTGGAACTC 70 38 657 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3781 ATGGTAGATCAGGAGAAGGAAACCACCCAT 70 47 TTAGAACTTAAAGCCCCGATGTAACGCAAC 69 43 756 ubiE ubiquinone/menaquinone biosynthesismethyltransferase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.11 Menaquinone and ubiquinine [16] Ubiquinone biosynthesis none EC:2.1.1.- YPO3782 ATATCAGTTTATTTTATGGGCTGGGTGGCTGTTTG 72 40 TGCGTCATCGGATAGCGCTAAATCACCCT 74 52 255 rumC putative DNA recombination protein Other 5.I Unknown [1066] none YPO3783 GTGACCTTTAATGATGCCATTACTACCACCATT 69 39 TTAGCCTATCCAATTGGACAGCCATTGAAT 70 40 531 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3784 TTATCGCTTCCGCGTGTATCCTTACGATCTGCTA 74 47 GGATCCATAGCTCACGCCATTTCCTCAGC 74 55 255 none putative carbon starvation protein Other 5.F Adaptions and atypical conditions [36] none YPO3785 ATGACGATGACGACCTTCTCTCATCCC 70 52 AAAAATAAGACTGTAGTTTTTCACGCTCAATACTG 66 31 831 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3786 ATGGCTAAATCCGACGTTTTTCACTTGG 69 43 TTACAGCAGATGACGAGCGGCTTCTACTAC 69 50 762 udp uridine phosphorylase Purines; Pyrimidines; nucleosides; nucleotides 1.F.4 Salvage of nucleosides and nucleotides [16] Pyrimidine metabolism none EC:2.4.2.3 YPO3787 GTGAAAACGGATCAACTGGTTAGACTCAGACA 70 44 TTATTGCGTTTCTTCTGGAATGGGGATG 70 43 873 none putative carboxymethylenebutenolidase Degradation 1.A Degradation [18] "Phenylalanine metabolism. 1,4-Dichlorobenzene degradation" none EC:3.1.1.45 YPO3788 CAGCAACAACAAGCGGGTGTTGATT 69 48 AGCGGCTTTGCGTAATAACGCTTCA 70 48 255 metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase Amino acid biosynthesis 1.D.2 Aspartate family [24] Methionine metabolism none EC:2.1.1.14 YPO3789 ATGATCGAACTGAAACACTTACGCACCCT 70 45 TCATTGGAGCTGCGGTGATAATGG 69 50 255 metR lysR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3790 TTGCATTTTACCCTCTCACTGAGCCAATTTAT 69 37 TTATTCGTTCTGCTCGTCAGCACGC 70 52 255 yigM putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3791 ATGCCCGCCTTTGTTGTTTCGC 71 55 TCAGTGGCGTGGTGACGGC 69 68 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3792 ATGAATAGAGACTGGCCTTACCCTCCTATCGTT 70 45 TCAGCAGCCGGTAAAGTCCGAACC 71 58 750 ugpQ glycerophosphoryl diester phosphodiesterase Central intermediary metabolism 1.C Central intermediary metabolism [63] Glycerolipid metabolism. Phospholipid degradation none EC:3.1.4.46 YPO3793 ATGGCATGTTTAAAATTACAGGCAGTAACCAAATC 70 34 TCATGGTTCTATCCGTAGTCCGCTATCG 69 50 255 ugpC sn-glycerol-3-phosphate transport; ATP-bindingprotein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3794 ATGCGGAATGTGTTCTTATGGATAATCTTCCTC 70 39 AAAAACGCATGGCACCTGCGC 71 57 243 ugpE sn-glycerol-3-phosphate transport system;permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3795 ATGTCACCTTCTCGTCCCGGTTTTTC 69 50 TCATTGGTAACGCACCTTACGCTCAAC 69 48 888 ugpA sn-glycerol-3-phosphate transport system;permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3796 CATTCATAAAGTGTCGATCTGTATCGCGCTAACAC 72 43 TTATTTATTGGCTTGTTCAAAACGACGCAGTAA 70 33 255 ugpB glycerol-3-phosphate-binding periplasmicprotein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3797 ATGTCGCGTAATTATTTAACACCCTCATTTT 66 32 TTAAGCGCTTGGCTCCAGGCG 70 62 609 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3798 ATTTAGTGCCAATGGGGTTTTCCGC 70 48 GCCCAGGGTGAGCGCGTACAATATT 71 56 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3799 ATGAAATACCTTTATTCGATACTCAGCATCGCG 70 39 CTAATGGCAGCGAAGACTAAATTTTTCACCG 70 42 687 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3800 GTGAAAAATTTAGTCTTCGCTGCCATTAGCC 70 42 CTAGCCCGAAGGGCACTGTAGGTTAACC 70 57 648 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3801 ATGAATACCATAAAAATGGCCATCACATTGCTA 69 33 TTAACTATTAACTTCGAATACCAATGTCAGTTGCC 67 34 519 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3802 AAAAACAAACCACTGCTTATCGGGTTATTGC 70 39 TTAGGCTAACGGCGTGATAGTAAAATTCAGC 68 42 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3803 ATGATGGATGGCATAAGTAATAAAATG 61 30 TTAATATAACGTAGTAATACAAAGGTATTTACTGA 58 23 462 none hypothetical protein Other 5.I Unknown [1066] none YPO3804 ATGTTGTCATTTAATCAAGTTTCAGCCCATTACG 70 35 TTAGCCACCAAGATAAGCTGACCGCA 70 50 702 livF high-affinity branched-chain amino acidtransport; ATP-binding protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3805 ATGAATGGGCAACCTTTGTTAACAGTCGA 70 41 TTATTCACCCAAATAGGCTCGGATCACA 69 43 768 livG high-affinity branched-chain amino acidtransport; ATP-binding protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3806 ATGAAACAGCTCAACTTCGTTAATGCCATTATTT 69 32 TCATGCCTGCTCTCCCTGCTTAGCCTTTACAT 74 50 255 livM high-affinity branched-chain amino acidtransport system; permease protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3807 ATGTCAGAGCAGTTTTTATATTTTCTGCAGCAGAT 69 34 TCATACTTTTTCAACCTCCGGACGGC 70 50 255 livH high-affinity branched-chain amino acidtransport system; permease protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3808 ATGAAATTAACAAAAGGTAAAGTGTTGCTGGCTG 69 35 TTATTTGACTGCGGTAGAGGAACCATCC 68 46 255 livK livJ branched-chain amino acid-binding protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3809 ATGAACCTCGGCGCTATATCCACTTTATTACTATG 69 40 TTACCGCCGCCAGCCTTGTG 70 65 438 yhhK putative acetyltransferase Other 5.I Unknown [1066] none YPO3811 ATGACCAAAGAAATGCAAACTTTAGCCTTAGTGC 70 38 TCAGGCTTCAATCGCCATACGCA 70 52 858 rpoH htpR hin fam RNA polymerase sigma-32 factor Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO3812 ATGGCGAATAATGCGCGAAAAGC 69 48 TTATTGCGGTGTAAATCGGCGTAAATGTT 69 38 255 ftsX ftsS cell division protein Cell processes 4.C Cell division [24] none YPO3813 ATGATTCGCTTTGAACAGGTCAGTAAAGCTTATCT 70 37 TTATTCGCCATGGTGTGCTCCTGAC 70 52 669 ftsE cell division ATP-binding protein Cell processes 4.C Cell division [24] none YPO3814 GTCTTGGCCGTCAGAGTGAAGAACCAGC 73 57 CGTCAGCCTTAAATGGCCGCAAATCTTCTATACCT 74 46 255 ftsY cell division protein Cell processes 4.C Cell division [24] Protein export none YPO3815 ATGGCTTATACCTTTGGGTACAATAA 60 35 TTAGGTTGCAGAGATGTTCGC 60 48 144 none hypothetical protein Other 5.I Unknown [1066] none YPO3816 ATGGCAAAGCAACCTATAGCAAAGCGTT 69 43 TTAATCCACATGGTGTTGCTCCTGCTC 69 48 663 none conserved hypothetical protein Other 5.I Unknown [1066] Ubiquinone biosynthesis none EC:2.1.1.- YPO3816a ATGTGGATTAATCTCGGCCGGTTACTGAT 70 45 TTTTTAGGCAGTTGTGGCTGTTTCTTCTGC 70 43 273 yhhL putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3817 ATGAGCAAACTCCCTTTATTATTTATTGCCGTTG 70 35 TCAAGGATGCGGGGCATCCG 72 65 420 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3818 ATGGCGAATGAACAACTGCTNTA 63 39 TTAGGGTTTATTACCCGGTAAATAGG 61 38 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3819 ATGAGCTGGCCATTCCTTGCTGTATTTT 69 43 CTACAGATACAGCGACCTGACAATCAAAAAGTG 69 42 627 yhhN putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3820 CGAGAAATTGGTGGTAGATGCCCGT 69 52 CGTAACAACCTCAACGCATTCGCTG 70 52 255 none putative P-type cation-translocating membraneATPase Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO3821 TTGGTTAAGCTATTTGCTTTTGTTAAACCATCGG 70 35 TTAACCTGCGGTTATTCCCTTCCTCACC 70 50 396 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3822 ATGTTTTCGTTTACTGTCCAACAGCGGA 69 43 CTATCGTTCAGTTGCCAGCACTGGC 69 56 669 yhhQ putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3823 AAAAATAGTTCGATTTCTTGCCGTCGGC 70 43 TTATTTCAGCTTCAAGGTACTGATAATGGATTCGG 70 37 528 dcrB putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3824 ATGACAGGGTTGCCAAAGCATGATG 69 48 AAGCCAATGCCCGCGCCAGTAAA 73 57 255 glpC anaerobic glycerol-3-phosphate dehydrogenasesubunit C Energy Metabolism Respiration 1.B.7.b Anaerobic [24] Glycerolipid metabolism none EC:1.1.99.5 YPO3825 ATGAAATTTGATGTGATCATCATTGGCG 69 36 TCATAATGTCACCGCCATCTCGCTG 71 52 255 glpB putative anaerobic glycerol-3-phosphatedehydrogenase subunit B Energy Metabolism Respiration 1.B.7.b Anaerobic [24] Glycerolipid metabolism none EC:1.1.99.5 YPO3826 ATGACGAACAGTTCTCCTTATCTAGAAACGGATGT 70 40 ATTCACGGTGGCTGGAATCTCATCCAAAC 73 48 255 glpA anaerobic glycerol-3-phosphate dehydrogenasesubunit A Energy Metabolism Respiration 1.B.7.b Anaerobic [24] Glycerolipid metabolism none EC:1.1.99.5 YPO3827 ATGCAAACTCACGTCAAAACGCTGTTG 70 44 TTATTTATGCTGTTGCTGTTTTTGCAGGAACT 69 34 255 glpQ glycerophosphoryl diester phosphodiesterase Central intermediary metabolism 1.C Central intermediary metabolism [63] Glycerolipid metabolism. Phospholipid degradation none EC:3.1.4.46 YPO3828 AAAAATTATCAGATGCAGAGATAAAAGAAGAGAAA 65 26 TTATTCAACGTGACTCACTACATTCTGATAGTGAT 66 34 255 none hypothetical protein Other 5.I Unknown [1066] none YPO3829 ATGAGATCCTGTTTGAGCGGGACAC 68 52 TTACTCTTCCTTACCTAAGAACATCTTACGCA 65 37 255 none putative haloacid dehalogenase-like hydrolase Other 5.I Unknown [1066] none YPO3830 ATGAATAATTGGTTAACCCGAGAAGAGCAATTTG 70 35 CTAATGGCCGACTGATGATTGATGTTGC 70 46 255 pldB putative lysophospholipase Central intermediary metabolism 1.C Central intermediary metabolism [63] Phospholipid degradation none EC:3.1.1.5 YPO3831 ATGACCTTAGACTGGTGGTTAACCTATCTGCTGA 70 44 TTATACTTTGCGCGCTGTGGCTAATAATGC 70 43 621 rhtB putative homoserine/homoserine lactone effluxprotein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3832 ATGTTGATGCTATTTCTCACCGTTGCGT 69 43 TTAGCGGGACAATATCAGTTGGATACCAAAAC 70 41 621 rhtC threonine efflux protein Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO3833 CTGGCAGTGCAGGTATTGCGAGATACTTTTGGTTA 74 46 ACCAAAACGTTCTAGTTTACGCTGACCGACACCAT 74 46 255 recQ ATP-dependent DNA helicase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] Starch and sucrose metabolism. Folate biosynthesis none EC:3.6.1.- YPO3834 ATGGCGAGATTTTGGCAGATACTGATTG 69 43 TTAAAGGACATCGTTCAACATGATACCTACACCC 70 41 879 pldA phospholipase A Central intermediary metabolism 1.C Central intermediary metabolism [63] Glycerolipid metabolism. Phospholipid degradation none EC:3.1.1.32 YPO3835 ATGTCAGTAACGCCCTTAACACTGGAAGAC 68 47 TTAGCCAACCAGATAGGTCGCCGTC 69 56 471 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3836 ATGGATAAACAACAAACTCGTCAGGGCA 69 43 TTACCGGCGTAGTTTGCGTTGGGTATA 70 48 891 rarD putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3837 ATGCTGAGCGCATTTAAATTACACAACAATC 68 35 CTAGAGCCAGTTTTTACGTTTGAAGTACAGATAAG 65 37 255 corA magnesium and cobalt transport protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO3838 ATGGAGAAGCACATGCCTAAATTTCAACG 70 41 TCAACGCGTTATATTTTTAAATTTTTGGGTGGT 69 30 843 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3839 ATGCCTCGTCATATTTATATTGCTACCACTACCG 69 41 CTAATGGGAAGGACGATTCACAATTTCTTTAAAGT 69 34 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3840 GTGAATACTCAGAATAAACAAGAAGGTTTCTCTCC 66 37 TTGTCCTGAGCCGCCAGTTGG 69 62 687 none putative TetR-family regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3841 CGTTTCTGATCTGCTCGACAGCCTG 70 56 CTGTCATTCTCGTGCATCGGAGTCC 70 56 255 uvrD mutU pdeB rad recL DNA helicase II Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] Starch and sucrose metabolism. Folate biosynthesis none EC:3.6.1.- YPO3842 ATGCATTTTTATCGTCCACTTGAGCGTATTTC 70 37 TTATAGCAATGCTGTCAGGGATGCCAA 69 44 717 none putative haloacid dehalogenase-like hydrolase Other 5.I Unknown [1066] none YPO3843 ATGACCGAGTTCAGTGCTTCACTGGC 70 54 TCAGGATTTGCCTCGTTTGGCC 69 55 255 xerC putative integrase/recombinase Cell processes 4.C Cell division [24] none YPO3844 ATGAAGAATTATGAGGAGCAGGCGTTAGC 68 45 TCATACCGGCTCGATCCAACGTG 70 57 705 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3845 ATGCAGTTCTCCAAAATGCACGGTCTT 70 44 TCATAAATGAATAAATCCGTCATAGACATGGGTG 69 35 825 dapF diaminopimelate epimerase Amino acid biosynthesis 1.D.2 Aspartate family [24] Lysine biosynthesis none EC:5.1.1.7 YPO3846 ATGAAAAAAGAACTACGTTGGCC 61 39 TCACTGTGACTCGGCAGTAGAG 61 55 189 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3847 ATGAACGACAGCGAGTTTCATCAGTTAGC 69 45 TTAACCAAAGCTAACATTTTCACCGGCTTG 70 40 321 cyaY frataxin-like protein Other 5.I Unknown [1066] none YPO3848 TTGGATGAATTTTACCGTAGCGCGG 70 48 GCATTGTTTGGTCGGTAAGCTGGCT 69 52 255 cyaA cya adenylate cyclase Broad regulatory functions 2 Broad regulatory functions [235] Purine metabolism none EC:4.6.1.1 YPO3849 ATGTTAGACAAAATTATTCGAATTGCCACACGA 70 33 TCATCGCGCAGGATTATCCAGATAAAC 68 44 255 hemC popE porphobilinogen deaminase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] Porphyrin and chlorophyll metabolism none EC:4.3.1.8 YPO3850 ATGACAATCCTGGTCACCCGTCCAT 70 52 TTATTGAAGGTCTTGTAACGCACGGATCAG 69 43 750 hemD uroporphyrinogen-III synthase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] Porphyrin and chlorophyll metabolism none EC:4.2.1.75 YPO3851 ATGACGGAACAAAATACCCCATCCG 69 48 TTATTCCCCCTGAGCATCAACTGGC 69 52 255 hemX putative uroporphyrin-III C-methyltransferase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] Porphyrin and chlorophyll metabolism none EC:2.1.1.107 YPO3852 ATGCTGCGAGTCTTGCTGTTATTCCTTG 69 46 TCAATGTATTAATTTGGTTAGAGCGGATGATTCG 70 35 255 hemY putative protoheme IX biogenesis protein Biosynthesis of cofactors; prosthetic groups and carriers 1.G.12 Heme and porphyrin [22] none YPO3854 ATGGCAGACAACGCAGAGAAAAA 65 43 CATCCCCAGCACAAAATAGCATCCCG 73 54 255 none putative permease protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO3855 ATGGAACCCAATACTGTCATTCCAAAATATAATGT 68 31 GACGACCACTATAATAATAACCAACAAACTTAAGC 65 34 741 wecG rffM probable UDP-N-acetyl-D-mannosaminuronic acidtransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3856 ATGACGCTGGGGCAATTTGGC 70 57 GCGTTGATAATCGGTTGGATTTAATCCCCTGAC 74 45 255 wecF rffT probable 4-alpha-L-fucosyltransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3857 ATGATAACCCTGACTCATGTACTGGGATCTGA 69 44 TCATGGGTGTTCCCCCGCA 70 63 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3858 ATGTCTCTGGCAAAAGCATCGATTTGG 70 44 GCTGAGTGTCTACGATACACAAGGAATGCGC 73 52 255 wzxE wzx b3792 putative lipopolysaccharide biosynthesisprotein Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3859 ATGATTCCATTTAACACTCCACCGATAGTGG 69 42 TCAGACGAAGAAACTCAGCACAGTATTAATAACCG 70 40 255 rffA wecE b3791 putative lipopolysaccharide biosynthesisprotein Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3860 TGCATGTATCAGGAGAACGTATGAAAGGCATAATT 71 37 CATAACCAATACGCGGTACTCTCAATGGAGGCA 74 48 255 rffC wecD b3790 putative lipopolysaccharide biosynthesisprotein Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3861 ATGTATCAGGAAATTGTATGTATCAGGAGATTGCA 68 34 TCAATACTGGCGTGGACGGGC 69 61 255 rffH glucose-1-phosphate thymidylyltransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Nucleotide sugars metabolism. Erythromycin biosynthesis none EC:2.7.7.24 YPO3862 ATGGCGTTGAGGCGAATTCTCGT 69 52 TTAGTCACTCAAGCCCAAACGCTCTCC 70 52 255 rffG dTDP-D-glucose-4;6-dehydratase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Nucleotide sugars metabolism. Erythromycin biosynthesis none EC:4.2.1.46 YPO3863 ATGAGTTTTGAAACTATTTCTGTTATCGGTCTTGG 68 34 TCAACGCCATACTCCTTTGGTATCAACAA 69 41 255 rffD wecC b3787 putative UDP-glucose/GDP-mannose dehydrogenase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] "Fructose and mannose metabolism. Galactose metabolism. Ascorbate and aldarate metabolism. Bile acid biosynthesis. Glycine, serine and threonine metabolism. Lysine degradation. Phenylalanine metabolism. Nucleotide sugars metabolism. Glycerolipid metabolism. Tetrachloroethene degradation. Benzoate degradation. Butanoate metabolism. Vitamin B6 metabolism" none EC:1.1.1.- YPO3864 GTGCGCCCAACTTGCAGGC 69 68 TCATAGCGTCACCTGATGATTCTTTAAAGCTTT 69 36 255 rffE wecB nfrC UDP-N-acetylglucosamine 2-epimerase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] Aminosugars metabolism none EC:5.1.3.14 YPO3865 ATGAAACCAGAATCTATGTCGACTGATAAAACAGG 69 37 TCACAGTGCCTTACTGGAGCGGC 69 61 255 wzzE wzz b3785 putative lipopolysaccharide biosynthesisprotein Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3866 TATCTTTCTGTTTTCTATGGCATTTCTATTTGTTG 66 29 TTAAGATTCATGCTTATTTTTCGATGCCCG 70 37 255 rfe b3784 putative undecaprenyl-phosphatealpha-N-acetylglucosaminyltransferase Macromolecule metabolism Cell envelope 3.C.2 Surface polysaccharides; lipopolysaccharides and antigens [50] none YPO3867 ATGAATCTTACCGAATTAAAGAATACGCCGGTT 70 36 TTACGAGCGTCTCATATTATCAAAGAACTGATCGT 69 37 255 rho nitA psuA rnsC tsu sbaA transcription termination factor Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO3868 ATGAGCGATAAAATTATTCACCTGAGTGACGAC 69 39 TTACAGATTTGCATCCAAGAACGCTTTGAG 70 40 327 trxA tsnC fipA thioredoxin 1 Biosynthesis of cofactors; prosthetic groups and carriers 1.G.10 Thioredoxin [10] none YPO3869 ATGAGCAAAACACACTTGACTGAACAGA 66 39 TCAGCCTGGTCGCTTACGGTTATTCC 70 54 255 rhlB mmrA putative DEAD-box helicase Other 5.I Unknown [1066] none YPO3870 ATGATGCTAAGTTCCACCTCACTTTATGCTGC 70 44 TCAGACGGGCTTCTTCTTCGCC 69 59 360 gppA gpp guanosine-5'-triphosphate;3'-diphosphatepyrophosphatase (pseudogene) Central intermediary metabolism 1.C Central intermediary metabolism [63] Purine metabolism none EC:3.6.1.40 YPO3872 AGCCAACAAGAAGCCGTCGAATTTG 70 48 CGCATTCGCTAACTGAGCACGAAGA 70 52 255 rep ATP-dependent DNA helicase Rep Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] Starch and sucrose metabolism. Folate biosynthesis none EC:3.6.1.- YPO3873 ATGGCAAACAAAGCTTCTGCACTGC 69 48 TTAGCTGCGGTACAACACTTTAATGATGTGATATC 69 37 282 ppiC peptidyl-prolyl cis-trans isomerase C Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO3874 ATGGAGATATTAAATATACCTCGCCGTTGCTTTAC 68 37 TCATTTGGATGTTAAAAATTTCACTTCAAAG 65 26 792 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3876 TTGCTTTTATTAAATAATTGTAGCTATTGTTTT 61 18 TTAATGCAACACTCGATAAGCG 60 41 228 none hypothetical protein Other 5.I Unknown [1066] none YPO3877 ATGAAAAAAATTACTTTAGCTATCGCG 61 30 TTACAAGTAAGAAACGGCATACTGTACA 61 36 531 none putative fimbrial protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO3878 ATGCTTAGTATATATGCCCGCCACTATCATTATCT 67 37 CTAAATACGATAGCTACCGGCATCTTGCCC 70 50 732 none putative fimbrial chaperone Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO3879 AACTGAAACTCACGCCCCAACGAAC 70 52 CGGCTTGAATTAACACCGCATAGCC 69 52 255 none putative outer membrane usher protein Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO3880 TAATGTTAAGACCAACAAAGCCATTAATATCTTCC 66 31 TTATTGGACACGGATAACCACTTGCGC 70 48 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3881 ATGCACATGCGCAAGTGGTTATCC 69 50 TTATTTCAACTCATGGCTAAAAGAGTTTCGGTTG 69 35 819 none putative chaperone protein Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO3882 TTGGGGGCGAGTAGTGCAC 65 63 TTATTTATTTTTAAGGTCAACAACTAAGTGACT 61 24 159 none hypothetical protein Other 5.I Unknown [1066] none YPO3883 TTAAAGAGAAGTATGAGGATTATACAGAGCATGAA 65 31 TTTTTGAAACCGGGCTTACCATTTTCAG 69 39 258 imm colicin immunity protein Other 5.B Colicin-related functions [10] none YPO3884 ATGACTTTTTGGCGCGAGG 63 53 TTATTTTCCTCCACGTCTTGAATG 61 38 252 none colicin (partial) Other 5.B Colicin-related functions [10] none YPO3885 ATGTCAATCATGGAAAAGATAATTCAA 61 26 TTATTCAATGCCGTATTTTTTGTCG 63 32 264 none hypothetical protein Other 5.I Unknown [1066] none YPO3886 ATGGGCCTCTTAATGCAGCAACAGC 70 52 TTTTTAACTCTGCTTTGATATATGCATCTTCAGCT 67 31 255 none colicin (partial) Other 5.B Colicin-related functions [10] none YPO3887 ATGCTTTATTACGAACCTGAATTTTTAG 60 29 TCAGATAATATGTGCCGCTGTTT 61 39 201 none hypothetical protein Other 5.I Unknown [1066] none YPO3888 ATGGCTAACTATTTCAACACATTGAACCTGCG 70 41 AATACGCTTCATATCTGTCATGTAACCACGCAGCT 73 43 255 ilvC ketol-acid reductoisomerase Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Valine, leucine and isoleucine biosynthesis. Pantothenate and CoA biosynthesis" none EC:1.1.1.86 YPO3889 ATGGATTTACGTGACCTGAAAGTATTTCTGCATC 70 38 TTATAACAATCCCCAAAATGCATCAATCAACG 71 34 882 ilvY LysR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3890 ATGGAAGATAATGGTGCTGTAGCT 60 42 TTAAGCGGCAATAACACGGC 63 50 210 none hypothetical protein Other 5.I Unknown [1066] none YPO3891 TTGGAAGCCGTTAACAACATAAA 61 35 TTAGATCACCACATTAAAATCTGTTTTTAA 61 23 192 none hypothetical protein Other 5.I Unknown [1066] none YPO3892 ATGCCTTATGGTTATGCTTATGATAAAAATCCTGA 68 31 TTACTTTTTGCTTTCATTACGGCCCCC 69 44 672 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3893 ATGAAAGCAAAAAGTAAAAAGACTCTCTAT 60 27 TTATTCGTGTTTCATTTTAACGATTTC 61 26 462 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3894 TTGAGATTACCGGGGGCCG 67 63 TTATTCGCGTTTCATTTTAACGA 61 30 483 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3895 TTGAGATTACCGGGGGCCG 67 63 TTATTCGCGTTTCATTTTAACAATT 60 24 486 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3896 ATGGCAGTTTCGCAACCCTTATCTGCT 70 48 TAAAAAGAACTTAAACGCCGGGTTATCCGTTTCAT 72 37 255 ilvA threonine dehydratase Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Glycine, serine and threonine metabolism" none EC:4.2.1.16 YPO3897 CACTGTGGCGCGCAACCGGTAT 73 64 CTTTATCAGCGCTGGTTGCTAACATCGCGTAA 74 47 255 ilvD dihydroxy-acid dehydratase Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Valine, leucine and isoleucine biosynthesis. Pantothenate and CoA biosynthesis" none EC:4.2.1.9 YPO3899 ATGACGAAGAAAGCGGATTACATT 62 38 TTATGGATTAACCTGATCCAGCC 61 43 ilvE branched-chain amino acid aminotransferase Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Valine, leucine and isoleucine biosynthesis. Pantothenate and CoA biosynthesis. Valine, leucine and isoleucine degradation" ilvE EC:2.6.1.42 YPO3900 ATGATACAACATCAACTCTCGATCCAAGCC 69 43 TCAGGCGCGTATCTGTAATGTATTAGGTTGTAGG 70 44 258 ilvM acetolactate synthase isozyme II small subunit Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Valine, leucine and isoleucine biosynthesis. Butanoate metabolism. C5-Branched dibasic acid metabolism. Pantothenate and CoA biosynthesis" none EC:4.1.3.18 YPO3901 GGTGCTCAGTGGGTGGTCCAAGCGT 74 64 CATTACCTGCGCCTGGCGGCACTA 74 62 255 ilvG acetolactate synthase isozyme II large subunit Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Valine, leucine and isoleucine biosynthesis. Butanoate metabolism. C5-Branched dibasic acid metabolism. Pantothenate and CoA biosynthesis" none EC:4.1.3.18 YPO3902 GGCAACCATTCATACTCGCGCAACATTG 74 50 TTACATCAGGCTTTTGTGCAACTGCAATAG 69 40 255 none putative magnesium chelatase family protein Other 5.I Unknown [1066] none YPO3903 ATGTTTTGTTTTACACGCTGTCAAGCCTATCTAA 69 35 TTAATCGTCGCTATCGGTATAATCCTCCACAG 70 44 423 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3904 GTGGATACCGAATTACTGAAAACCTTTTTAGAGGT 68 37 TTACTCCCGTGTAACGCTCTGGGTCG 71 58 882 none LysR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3905 ATGTTAAAGCGTAATGTTCCCTTGCTGATTACT 68 36 TTACACGGGAGTAAGTGGCGATGACTG 69 52 255 none putative sugar transport system permease Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3906 ATGGGAAACAGGAGCCTGTCAATGAC 69 50 TTATTTTCGCCTCTGGAAGAGATGGCTTAA 69 40 255 none putative sugar transport system permease Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3907 TGTTGAGTTTCCTGGTGTTAAGGCATTGGACTC 73 45 GCCTGCATAATGGCAGGAACGGAAATTTC 73 48 255 none putative sugar transport system ATP-bindingprotein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3908 ATGTACAGGCGTTTACTGTTAGCAGCAGCT 69 47 TCAATAACCAAGACTTTTCTTCAACTCATATTCCT 67 31 255 5SrRNA 23S_rRNA 16S_rRNA putative periplasmic protein precursor Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3909 TTGCTGGGTTCATCTGAGCTGGTG 69 54 TTAAATTGGTAGTTTTTGCAGCTTCGGGAA 69 37 378 murI dga glr putative glutamate racemase Macromolecule metabolism Cell envelope 3.C.4 Murein sacculus and peptidoglycan [41] Glutamate metabolism. D-Glutamine and D-glutamate metabolism none EC:5.1.1.3 YPO3910 GCAGGGTAATAACACCACGGACAACAATGATGAA 74 44 CCATAAACCATCTCATAATCTTTATCAAACAGGTT 67 31 255 none putative vitamin B12 receptor protein Macromolecule metabolism Cell envelope 3.C Cell envelope [20] none YPO3911 ATGACTCCCAACATCCTGCCGATTG 70 52 TCAGTGACGTTTTTCCAGCAGTACCCC 70 52 255 trmA tRNA (uracil-5)-methyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] none YPO3912 ATGGAACAATCTTCTCGCCGTGAAAC 69 46 CTATTGCTGTGGTTGATCCGAGTTATTGATATCA 70 38 408 yijD putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3913 ATGGAGTTTATCGGCAACCACCCTTATG 69 46 TTATGCACAGACACTGTAGACAATTGTGACCA 69 41 216 none TetR-family transcriptional regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3914 ATGCAACAGCACTTCCATTTTGATGC 68 42 GATTTAAGCCATTGAGTGCGGCCACAC 72 52 255 sthA sth udhA soluble pyridine nucleotide transhydrogenase Central intermediary metabolism 1.C Central intermediary metabolism [63] Nicotinate and nicotinamide metabolism none EC:1.6.1.1 YPO3915 ATGAATATTCGTGATCTAGAGTACTTAGTGGCGTT 67 37 TTAAATCGCCTGTTCTAATGATGGGGC 69 44 255 oxyR oxidative stress transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3916 AAAAAGTCCCGCAGGTAACTTTCCATACC 69 45 TTAGGCTGGTAGGTACTTTTCCAGATCGTCG 70 48 732 none putative peroxiredoxin/glutaredoxin familyprotein Other 5.I Unknown [1066] none YPO3917 ATGAAAACCTTAAACGTTGATGTCGCTGTTATTG 70 35 GCAGCGTAGGCAGCGCTCCG 72 75 255 none putative pyridine nucleotide-disulphideoxidoreductase Other 5.I Unknown [1066] "Glycolysis / Gluconeogenesis. Citrate cycle (TCA cycle). Glycine, serine and threonine metabolism. Pyruvate metabolism" none EC:1.8.1.4 YPO3918 ATGAATAGATTACAGCAGAGCAGTGACAAACTT 66 36 TTATTTCCTTTTTAGATTAAAATCAACGGGCAGAG 68 31 804 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3919 ATGTTGCCTGAATCAGTCTGTTATTCGGTTG 70 42 TTATTCCTCGGCTAACGCGAGGTG 69 54 255 none HlyD family secretion protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3920 CATCGGTACCGCCAACAATTCTGTCGGT 74 54 GTTGCTCCAACCGCTTCGGCTATTCAGTATTTTC 74 47 255 none ABC transporter protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3922 TATTCAATATAACAGTAATTATGCCGATTACAGCA 65 29 TTAAGCGGCTAGCAGCATATCGTGG 68 52 618 none hemophore HasA Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3923 GGTGATTGAACGGGGCATTTTCAAC 70 48 AATAGTCCTACCGCGACTAGGGGCG 69 60 255 none putative TonB dependent receptor protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3924 GACGGTTTAGTCAGGCAGCAGATCAGCGTTTTA 74 48 TTAAAACAGCCGCGCTTTAGCCTCG 71 52 255 argH putative argininosuccinate lyase Amino acid biosynthesis 1.D.1 Glutamate family [19] Urea cycle and metabolism of amino groups. Alanine and aspartate metabolism. Arginine and proline metabolism none EC:4.3.2.1 YPO3925 ATGATGAACCCGTTGGTCATTAAATTAGGTG 69 39 TTAGACCGAAATACGCGTACCAATCGGTA 69 45 777 argB acetylglutamate kinase Amino acid biosynthesis 1.D.1 Glutamate family [19] Urea cycle and metabolism of amino groups none EC:2.7.2.8 YPO3927 ATGTTAAATACGTTGATTGTTGGTGCCAGTG 69 39 CTACAACAGGGACTGCGTTTCCGG 69 58 255 argC N-acetyl-gamma-glutamyl-phosphate reductase Amino acid biosynthesis 1.D.1 Glutamate family [19] Urea cycle and metabolism of amino groups none EC:1.2.1.38 YPO3928 ATGAAATTACCTCCATTTATTGAGCTGTACCGG 69 39 TTATTTCTGCTGGCAAAAGTGGTCAACTAGC 69 42 255 argE acetylornithine deacetylase Amino acid biosynthesis 1.D.1 Glutamate family [19] Urea cycle and metabolism of amino groups none EC:3.5.1.16 YPO3929 GAACGCAACAAGATCATGCGTCGTT 70 48 TACACGTTACGCAACGCGATGGATT 69 48 255 ppc glu phosphoenolpyruvate carboxylase Energy Metabolism 1.B.8 Fermentation [3] Pyruvate metabolism. Carbon fixation. Reductive carboxylate cycle (CO2 fixation) none EC:4.1.1.31 YPO3934 TTGTTTTTCTCGCGTAGTGACC 62 45 TTAACCGAATTTGATTGTGCG 61 38 432 none hypothetical protein Other 5.I Unknown [1066] none YPO3935 ATGAAAGTAAAAAGTAAAAAAAATCTCTGG 60 23 TTATTCGCGTTTCATTTTAACTATCTTG 62 29 465 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3936 ATGATAAGCTTATCTGAATCAATATATGAGAG 60 28 TTAATAGTATCTTTTATAAGCCATATAAAACGG 60 24 375 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3937 CTGTGCTACGTCTTCCGCCAGTTCCAAACTTAT 73 48 AAACCAGCGGCAGCGCCTGTTGTT 74 58 255 glpD glyD aerobic glycerol-3-phosphate dehydrogenase(partial) Central intermediary metabolism 1.C Central intermediary metabolism [63] Glycerolipid metabolism none EC:1.1.99.5 YPO3938 GACGCAACATGATTGGTTGAATGCA 69 44 TCAACCTGCTCAGTCGTATTCCCGA 69 52 255 glgP glgY glycogen phosphorylase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.10 Polysaccharides (cytoplasmic) [5] Starch and sucrose metabolism none EC:2.4.1.1 YPO3939 ATGATGAGGGTTTTACATGTATGTTCTGAGCTGTT 69 37 TTACAGACGTCGATAAAGTGACAAATAATCTACGG 68 37 255 glgA glycogen synthase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.10 Polysaccharides (cytoplasmic) [5] Starch and sucrose metabolism none EC:2.4.1.21 YPO3940 ATGGTGAGGTTTGAAAGTACAGACTCATTGATGTT 70 37 CTAATGACTGGCCTGTATCGACGCCA 70 54 255 glgC glucose-1-phosphate adenylyltransferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.10 Polysaccharides (cytoplasmic) [5] Starch and sucrose metabolism none EC:2.7.7.27 YPO3941 ACTTTGATGGGAAGGGCATTAATTTCACACTATTT 70 34 CATGGTCTGACACCCCAAAGGGAGG 72 60 255 glgX putative alpha-amylase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.10 Polysaccharides (cytoplasmic) [5] none YPO3942 CAGATTTGTGCATTGCTGCCAGATG 69 48 ATGGCTATCAATGCCGCCCTGATTA 69 48 255 glgB 1;4-alpha-glucan branching enzyme Macromolecule metabolism Synthesis and modification of macromolecules 3.A.10 Polysaccharides (cytoplasmic) [5] Starch and sucrose metabolism none EC:2.4.1.18 YPO3943 GTTATTGCCTATCTGCTGAGTAAAACACCGCTTTT 71 40 CACGGTAATAAACGGTAACTTAATAATAATACGGG 66 34 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3944 GAACAATGCGCTAGCTGATGGGGTT 69 52 GCCAACCAAACTGTTGGTCAGCGTA 69 52 255 none putative invasin Cell processes 4.I Pathogenicity [38] none YPO3945 TTGTTTCTCGATATTGTTACAGCAGA 61 35 TTACCACCTGCCTTTCCTGTT 61 48 375 none hypothetical protein Other 5.I Unknown [1066] none YPO3946 ATGAAAGCCATCCATCTTGGA 62 43 TTATTTACTCAGAGTAATGACAATTTTTTCA 60 23 288 none hypothetical protein Other 5.I Unknown [1066] none YPO3947 TTGAAGCATTCCACGGTAAACC 63 45 TCAGCCTTGATGCTGTAAGGC 63 52 375 none hypothetical protein Other 5.I Unknown [1066] none YPO3948 ATGGGTAAGCAAAACTTTTATTTTCTAGG 62 31 TTAATATAGTTTTGAGAAAATCATATGCGG 62 27 282 none hypothetical protein Other 5.I Unknown [1066] none YPO3949 ATGAAAAACGTTGGTTTTATCGGCTGG 69 41 CTACAGCAGAATTCGCAGCATACGGC 70 54 255 asd aspartate semialdehyde dehydrogenase Amino acid biosynthesis 1.D.2 Aspartate family [24] "Glycine, serine and threonine metabolism. Lysine biosynthesis" none EC:1.2.1.11 YPO3950 ATGCTGATTTTTCTGTTCGCAGGCG 70 48 TCAACCGGTCCAGCTCAGAACACC 70 58 372 yhgN putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3951 ATGACCAACGACACCGCTTTAGATTACGT 69 45 TTAGACGTCAAAATCATCAGGGTAAGCGG 70 45 390 none hypothetical protein Other 5.I Unknown [1066] none YPO3952 ATGAGCCTAAGCCTTCTCGG 61 55 TCACTCCAGCTTATCTTTTTCACG 62 42 234 none hypothetical protein Other 5.I Unknown [1066] none YPO3953 ATGGGCGTATCGGGTAGTGGTAAAACC 69 52 CTAAGCCAACGCCCCCACGC 71 70 480 none putative gluconokinase Degradation 1.A.1 Carbon compounds [66] Pentose phosphate pathway none EC:2.7.1.12 YPO3954 TGCCATTAATCATCGTCGCAGTTGGC 73 50 CTAAATAACCAGAGACAGCAACAAACAGCCG 70 45 255 gntT usgA gntM putative gluconate permease Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3955 AAAAAGGCCAGTGCTACAAGATGTCGC 69 48 TTATATACTGCCACCGGGGAGGATGG 70 54 255 gntR gluconate utilization system Gnt-Itranscriptional repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO3956 TTTTTACGTAAAGCAGACGATCGCGG 69 46 TTAAATTGGTGGTAAATCAAACAACAGGATCTCG 70 35 696 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3957 TTGCTGCGCCTCACCACCA 70 63 TTATTTTTTCCAGAGGTGAGGGG 63 43 270 none hypothetical protein Other 5.I Unknown [1066] none YPO3958 ATGAAACCTGCAATCCTCGTGGTGG 70 52 CTAGGCATGAATAATATCGGCGGCAAAG 70 46 738 none putative response regulator protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3959 ATGATAGAACGCAACGGGATTATTGCC 69 44 TTAACTGTTCTCACGAATAAACACGTCTAATTCCG 69 37 255 none PfkB family carbohydrate kinase Other 5.I Unknown [1066] none YPO3960 ATGGCTTTGATTTCCCTTGCAAATGG 70 42 TCAGATTTGCTCTGAACTGCCGAAAATTC 70 41 861 none putative class-II fructose-bisphosphatealdolase Central intermediary metabolism 1.C Central intermediary metabolism [63] Glycolysis / Gluconeogenesis. Pentose phosphate pathway. Fructose and mannose metabolism. Carbon fixation none EC:4.1.2.13 YPO3961 ATGAAACGCTCCGAGGTCAACCAA 69 50 TCAGACGAAACGGCAGTACTCATTACACAG 69 47 684 none hypothetical protein Other 5.I Unknown [1066] none YPO3962 ATGCGTTTGAAACCCATAATGACCGC 70 46 TTATTTCATCGTCCAGCCTTTGTAAGTGCTG 70 42 255 none sugar-binding transport protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3963 ATGACTAACTCAGGCACGCCGCA 70 57 TTATGAGTTATGGTGACGGGTACGGTATTTGTCTA 69 40 255 none sugar transport system permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3964 ATGAATAAAGTCCCCCTCTTGGAGATGCGTAATAT 71 40 GTCCTCGGTCACGCCAGTTGCCA 74 65 255 none sugar transport ATP-binding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3965 TGTTCGTGGGCGATTGTTGTTCTTC 70 48 ACCGGTTTGCTTGGTGGTGAAGAAG 70 52 255 none putative hybrid two-component system regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3966 GTGGAACAGTTTGATGTGGTAGTCATAGGTGC 70 47 TTACTTCTTCGCCGCCAGCCCT 70 59 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3967 AAAAAGGTCATATTTTCCTTTTACCAACCCCC 69 37 AAGGCTATCCAATACAGTGCACCGGAAAGGAAGAT 74 46 255 none phosphate transport protein Cell processes Transport/binding proteins 4.A.5 Anions [14] none YPO3969 ATGATCAGTACCGTCGCGCTTTTT 66 46 CTAATACCACAACATTAGGGCCACCAGACTG 70 48 336 uspB universal stress protein B Other 5.F Adaptions and atypical conditions [36] none YPO3970 ATGGCTTACAAACACATTCTGATTGCGG 70 43 TTAGTCGTCTTCGCCATTTTCGTCATC 68 44 447 uspA universal stress protein A Other 5.F Adaptions and atypical conditions [36] none YPO3971 TTCTTTGGAGTCATTTCTAGAATCGTTACAACGGC 72 40 TTACAGCACGCCTTGGGCCAGC 72 64 255 gdhA NADP-specific glutamate dehydrogenase Amino acid biosynthesis 1.D.1 Glutamate family [19] Glutamate metabolism. Nitrogen metabolism none EC:1.4.1.4 YPO3973 TGAGTTACTCCAGGGAATACAGCAATACTATAATT 65 34 TTATGCCGTCAGTGACGTACTTAAAATAAAGTCA 68 35 255 none metalloprotease Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO3974 GTGTCACACGTCAGTATTTGTTTATTATCTGAAGC 67 37 CTAACGCGGCGGCGTCACC 71 74 771 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3975 TCTCCCTGCCACCGTTTTCTGCTAT 69 52 GCAACATGGCATCTAACTGCGGTTC 69 52 255 opdA prlC oligopeptidase A Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO3976 ATGTTAAGTTATCGCCATAGTTTTCATGCTGGC 70 39 TTATTCAGGTACTACCCATTTTACCAGCGTATGAC 68 40 843 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3977 ATGGAAACGACCCTGATGACCAAACAT 70 44 TCATCTCATGGTAACGAACTCTTCTGCG 69 46 255 gor glutathione reductase Biosynthesis of cofactors; prosthetic groups and carriers 1.G.10 Thioredoxin [10] Glutamate metabolism. Glutathione metabolism none EC:1.6.4.2 YPO3978 ATGCCAACCAGCTATCTTAAGGAAGACACC 69 47 TCTCTATTTTCATGCCAATATAGAGCTGAATAATT 65 29 255 none putative regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO3979 ATGACCACAGTTTCTGCTCTGGGCG 71 56 TTAACCCGCTAAATTAAACACGCCAAACA 69 38 255 none GntP family permease Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3980 ATGAAAATTATTATTGCTCCCGATTCATTCAAAGA 69 29 TTAACTTCTGCCCATTTTCCAGACAGCA 70 43 255 glxK putative glycerate kinase Degradation 1.A.1 Carbon compounds [66] "Glycine, serine and threonine metabolism. Glycerolipid metabolism. Glyoxylate and dicarboxylate metabolism" none EC:2.7.1.31 YPO3981 ATGAAAAATAGCAAACATAAAATTCTATTAGG 61 22 CTAATCCTCGGCATCTTTTGTTATT 61 36 507 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3982 ATGTTAAAAACAAAATACAATATCTTATTCGG 61 22 CTAATCCTCGACATCTTTTGTTATTTCA 62 32 498 none hypothetical protein Other 5.I Unknown [1066] none YPO3983 ATGACGGAAACAAACATGACGGAAAAA 68 37 TTATTTTCGTTTTCCTGTGATTTCTATACTGGCTT 68 31 870 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3984 AAGGTGCTGTTGGTGTGAATGTGGG 70 52 ATCAAGGTAACCGCCTTCCTCGGTC 70 56 255 yapE putative autotransporter protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO3985 ATGCCGAACGCACCGAAAGATAAAGT 70 46 TTACTTTTCTCCACGTGTTGGTAAACTCTTGTCTT 69 37 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3986 AAAAATCATCAGTGTCACGCTCAATAAAATGG 69 34 TTATTGCACCGGGAGGTGAGGTAGC 69 56 798 cdh CDP-diacylglycerol pyrophosphatase 1.H Fatty acid biosynthesis [33] Glycerolipid metabolism none EC:3.6.1.26 YPO3987 CGCATATCCATGCGGAAGATTTGGT 70 48 ACCTCACCTCCCGGTGCAATAACAC 69 56 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3988 ATGGCGACTAAACAGATGATGACCAACAG 69 45 TTAGCCGCAAAACAGCATCGGG 70 55 846 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO3989 ATGCCTTACGTCAATATTAAAATTACCCGTGAAG 68 35 TTATGACGATTGTCGTAGGTCAGTGACGC 70 48 201 none putative tautomerase Degradation 1.A.1 Carbon compounds [66] none YPO3990 ATGACCAGCAAAAATATTGCCGTTATCGG 70 41 TCAAGCAGTTGGCATGGCGG 69 60 255 kdgK 2-dehydro-3-deoxygluconokinase Degradation 1.A.1 Carbon compounds [66] Pentose phosphate pathway. Pentose and glucuronate interconversions none EC:2.7.1.45 YPO3991 ATGCAGGGCACCAAAATTCGTCTTATG 70 44 AGTTTCTACCGCTTCAGCAGGGGCAACC 74 57 255 none putative insulinase family protease Macromolecule metabolism Degradation of macromolecules 3.B.3 Proteins; peptides and glycopeptides [37] none YPO3992 TGAAAGTCTCTATTTTTAAAACGCTTTATTTTCAA 65 23 TCAGGACACAGAAACACTGCTTTTTACATTAGG 69 39 255 dctA C4-dicarboxylate transport protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO3993 AAAAACAAATTTTAGCGACGTTGCTACTGGG 70 39 TTAATTAATGGCGCGACTAGGCACCG 70 50 480 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3994 AAAAAGAGCATTATTGTTGAGTATGTCAGTGCTGG 70 37 AACAGCTCATTGTCACGGGTAGAAATTCGGG 74 48 255 pelY periplasmic pectate lyase precursor Macromolecule metabolism Degradation of macromolecules 3.B.4 Polysaccharides [13] Pentose and glucuronate interconversions none EC:4.2.2.2 YPO3995 ATGAATATTAAATTATTGTCTCTGGCAGTGGCATC 69 34 TTAGAAGCTATATTTTACCCCTACGCGATAACGTG 69 40 705 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3996 GCGGGTAAGGCGCTCATTAACGATT 70 52 GAGCGCTGCTGAAATACTGGGCTTC 69 56 255 yhjK putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO3998 ATGTTTGAGCGTTTATTGGCTTGGACAGA 70 41 TTAACGTTGACGGTGCCATGAGGG 70 54 900 none endoglucanase (pseudogene) Macromolecule metabolism Degradation of macromolecules 3.B.4 Polysaccharides [13] Starch and sucrose metabolism none EC:3.2.1.4 YPO3999 ATGAATTCGAACACTGAAGCGGCG 70 50 TCAAACAGAAACGACCTTCTCTGCTTCATC 69 43 255 dppF dppE dipeptide transport ATP-binding protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO4000 ATGGCACTTTTAAATGTAGATAAATTGTCGGTGC 69 35 TCATAGGGATGGCCTCCCCGC 71 67 255 dppD dipeptide transport ATP-binding protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO4001 ATGTCTCAACTTATTGAGTCAGCAGTAAAAAGTGC 68 37 TTACTGCTTGAGTTTGGGGTCGAGAGC 70 52 903 dppC dipeptide transport system permease protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO4002 ATGTTGCAGTTCATACTCCGACGTTTGG 70 46 TCATGATCGCGACCAGCAACAC 68 55 255 dppB dipeptide transport system permease protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO4003 GCTGGTTGCACTGACTATAGCGGCCAGTGTAC 74 56 GATGTTTACCCAATGGGTCCACAACATAGCC 72 48 255 dppA periplasmic dipeptide transport protein Cell processes Transport/binding proteins 4.A.6 Other [104] none YPO4004 ATGTTGAGTGTTTATTGTGCTGCC 62 42 CTAAATCAGATGTATCTGTACAGATTTTTTTG 61 28 249 none hypothetical protein Other 5.I Unknown [1066] none YPO4005 AGATTTTTGGTGGGGGATATTGTGCCTATTATATC 69 37 GGCATCAAATTCTGCGGGTTTGGTTATCG 74 48 255 none putative hemolysin activator protein Cell processes 4.I Pathogenicity [38] none YPO4006 ATGAAGTTGACATATATTAAAACGAAACAGGGGTT 67 31 TTTTACCGGTATCATTAATTAAAACAGTTTCATTC 65 26 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4007 ATGTGGTTTTTCCTCAAAAGTCGCGATAAC 69 40 ATCAGGTTGTCGCTTGCTTTAACTGCG 70 48 255 uhpC putative regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO4008 TTGGGATCCGGCATTCAACGA 69 52 GTTTCCTTTTGTAGACAAAGAAACTGTGGGCA 70 41 711 uhpB two-component system; sensor kinase(pseudogene) Broad regulatory functions 2 Broad regulatory functions [235] none YPO4012 ATGCTAAAAATAACTGGTGCCAGGCCC 70 48 TCATAGATTCAGTACTTTCTTAGCCAGCTCAACA 68 38 762 uhpA two-component system response regulator Broad regulatory functions 2 Broad regulatory functions [235] none YPO4013 ATGGACAGAGTGAAATCTTTATCACAGCAAAGTCT 69 37 TTTTAGCATCAATCCCACCATCCGGTGAGGTATA 74 44 255 yhjW putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4014 ATGCCTGCCATAGCGATTAAGCGA 69 50 TTATTGAACCGGCGCATCTATCTTGTCATCTATC 72 41 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4015 GATTCATCCACGCTCAAGCGCG 71 59 ATCTCACTGCTTTTCGCCCGCTCTTGAATA 73 47 255 none amino acid permease Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO4016 TCCTGGTCAGATGACGCTGGCTGACTTAC 73 55 TGGCATCAACTCATTCATATGACGTTGTGCAATAA 74 37 255 hutH histidine ammonia-lyase Degradation 1.A.2 Amino acids [23] Histidine metabolism. Nitrogen metabolism none EC:4.3.1.3 YPO4017 GAGATTCGAGCCCCGCAGGGTAC 70 65 ATTGGTAGGTTAAGTCCTTGCTCTTGCGCGC 74 52 255 hutU urocanate hydratase Degradation 1.A.2 Amino acids [23] Histidine metabolism none EC:4.2.1.49 YPO4018 ATGGAACTTAAGGATATTGGTAACACCGAGCTT 69 39 TCATTGGGTTTCCTTATATCCAGGGTAAACTCC 70 42 255 cysM pyridoxal-phosphate dependent protein Other 5.I Unknown [1066] Cysteine metabolism. Selenoamino acid metabolism. Sulfur metabolism none EC:4.2.99.8 YPO4019 TTAAAGAATGTGTATAAAAATGCTCAGGTAGTGAA 65 29 TCACTCAATGATATCTACCCCATGAGGTTTAACAC 70 40 567 none putative phosphoribosyl transferase protein Other 5.I Unknown [1066] Purine metabolism none EC:2.4.2.7 YPO4020 ATGCATGCTTATAGTGGAATAAGTTACGGCGTTA 69 38 TTATGCCCCTTTTGTTTTTGGGTTCC 69 42 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4021 AAAAATCATTGTTGTAGACGGATTTTCTTCCG 69 34 TTATGGCAGTAGATAGAATCCATCAGATTCCATTT 68 34 255 none hypothetical protein Other 5.I Unknown [1066] none YPO4022 ATGCGATTACGTTTAGCTTTATTTTCGTCATTACT 68 31 TACTGGCTTATCCAGTATTGCGCTCACCTTAT 70 44 255 none putative iron transport protein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO4023 ATGATATGCAGCCTATTCATCGGGGC 70 50 TCAGCCCGCATGACGTTTTGTC 69 55 255 none putative iron transport permease Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO4024 ATGCGGGCTGAGGAGTACTCTGCA 70 58 TTTTTATTAAAAGATAAATAAACAGTGCGCCGCC 69 32 255 none putative iron transport permease Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO4025 AAAAATACCAACAGACAACGGTACTCAATGAAATC 69 34 TTAGCGATAATAAACCGCGATATGCTGGC 70 45 759 none putative iron ABC transporter; ATP-bindingprotein Cell processes Transport/binding proteins 4.A.2 Cations [49] none YPO4026 ATGCAACCTGTAAGCCTTTCTTACAAGTTCGCCAA 74 43 CTAAGGTGTTTGCCTGTCATCAACTTCACTTT 69 41 564 none conserved hypothetical protein (partial) Other 5.I Unknown [1066] none YPO4028 ATGGCAAAACTACAATACATTCATGATGAAGCAG 70 35 TCACAAAATCATCTGTGCCGCCC 70 52 363 none putative regulator Other 5.I Unknown [1066] YPO0883 YPO4029 TTGGCTATTTCCACCGTACTGATGCTCA 70 46 TTAACTGGCGCGCGTTCGC 69 63 507 none IS903 transposase (pseudogene) Other 5.A IS elements; Phage-related functions and prophage [210] none YPO4031 ATGATGCGTTGTCCTGTGTGTAAACATGC 71 45 TTAATGAATTCGTGCGTTAGAACCGTAGCG 71 43 246 none putative regulatory protein Broad regulatory functions 2 Broad regulatory functions [235] none YPO4032 TTGAGAAATGAAGACTTTAAATCTTTTATGG 62 26 TTAATCAACTTTAGGTCGCATAACTGC 63 37 1308 none hypothetical protein Other 5.I Unknown [1066] none YPO4033 ATGCCACTATCAGATAGACAGATTCGCCGTGCTAA 74 46 TTAGATGCGCTCATAATTTTTCCTGAAAA 66 31 255 none putative phage integrase none YPO4034 ATGTTTGAAAAACGCTACCGGATCACCTT 70 41 TCAATAACTCACTTCGCCGTATTTATCACGG 70 42 255 none putative AraC-family transcriptional regulatoryprotein Broad regulatory functions 2 Broad regulatory functions [235] none YPO4035 ATGTCACAAGCTAATCAATCTGAATTTAACTCACC 68 34 TCACACCCGCCGTTTGGTG 68 63 255 none sugar transport system permease protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO4036 AAGATATTACCAAGCAGTTCGGCGTCGTCAAAG 73 45 TTTCACTCCTGAGTGCGGCTTCCATGAC 74 54 255 none sugar transport ATP-binding protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO4037 ATGAAATTTAAGAACATTTTACTCTCCGCATGCG 71 35 TTTTTGTGGAACCCGTCAGCGATG 70 50 255 none sugar-binding periplasmic protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO4038 ATGCAATCTTATTTTAATGAATTAGAACAAGTGCG 67 29 TCAACCAAATAAATAGCGGTTAACCTTATTCTCCA 69 34 255 xylA xylose isomerase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions. Fructose and mannose metabolism none EC:5.3.1.5 YPO4039 GACCTGGGCACCTCCGGCG 72 79 CACACAATGGCAGCAATTGTTGATAAAGTTTT 70 34 255 xylB xylulose kinase Degradation 1.A.1 Carbon compounds [66] Pentose and glucuronate interconversions none EC:2.7.1.17 YPO4040 TATTTTAAATAAAATAGGTCGAATCGGTGGCTGT 68 32 TAATAATAATTAATCTTAATGATTGCCGTAGCGTC 65 29 255 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4041 ATGAAAGACATAAATAGCATGATATGGAGACAACA 67 31 TCACCTTCTCTTTTCAGCTGGCTGAATTT 69 41 768 none putative fimbrial chaperone Cell processes 4.B Chaperones; chaperonins; heat shock [26] none YPO4042 GTGTTCCGTGGTGGTTATCAACATAGCTC 69 48 TTACTGGCAGGGCAGTAGTACCTTTCCTG 69 52 636 none fimbrial usher protein (pseudogene) Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO4044 ATGTCTAACGTTAAGAAAAGCACTTTTATTATTGC 65 29 TTATTTATAATTCAGAGCATAGGTTGCCTGAGAGA 67 34 558 none fimbrial protein Macromolecule metabolism Cell envelope 3.C.3 Surface structures [27] none YPO4045 ATGACCAATAAGATTGACTGGATTGATAACCTTCG 70 37 TTAACTGACCCACCGTCGCCG 69 62 255 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4047 TTGGCACGCAGTACATACTATTATCATGCATC 69 41 TTACTGCTTTTCTACCTGAGTCCGGTATTCTGC 70 45 786 none transposase for insertion sequence IS1661 Other 5.A IS elements; Phage-related functions and prophage [210] YPO0997YPO4092YPO3491YPO3932YPO0756YPO0118YPO3703 YPO4048 ATGCAAACTTCATTTTCACCCGCG 69 46 TTACTCGGTAGCAACCGCCTCGG 70 61 255 mdfA cmr multidrug translocase Other 5.D Drug/analogue sensitivity [28] none YPO4049 ATGGAATGCTATCACCTTTCCAA 62 39 CTATTTTCTTTCATACTCTGAATTATCATCCA 62 28 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4050 GTGACAGAATTAGAAATGGAAAAAAAA 60 26 TCATTCCTCCTTATTGGAAAGATATC 60 35 333 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4051 TTGAGCCTAGCACAGCAATGGGGT 69 54 CTATATTGTTGCCAGATTAGCGTTTTTGTATAAA 65 29 465 tnpA transposase (partial) Other 5.A IS elements; Phage-related functions and prophage [210] none YPO4052 CCTACTGGCCACTTCCTGATGGCCGTATC 74 59 CCCGGCGGCGGGTGAAA 73 76 255 selB fdhA selenocysteine-specific elongation factor(pseudogene) Macromolecule metabolism Synthesis and modification of macromolecules 3.A.8 Protein translation and modification [31] none YPO4054 CCATTATATCGCCAGTTACCGGCCATTGATC 73 48 TCATGATGCCAATTCCCTTAGCAACG 70 46 255 selA fdhA L-seryl-tRNA selenium transferase Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] Selenoamino acid metabolism none EC:2.9.1.1 YPO4055 ATGAGTATTCGTATTGTCCCTAAAGACCAATTAGG 67 37 TTACTCACCTGGGAACAAAAATGGATTAATACTGC 70 37 255 fdhE putative formate dehydrogenase formationprotein Energy Metabolism Respiration 1.B.7.b Anaerobic [24] none YPO4056 AAAAAGAAAAACCGATCCAGCGCTACAG 69 43 TCAGGGTTTCTCTTTCTGTTTCTCTTGCG 70 45 675 fdoI formate dehydrogenase; cytochrome b556 protein Energy Metabolism Respiration 1.B.7.b Anaerobic [24] Glyoxylate and dicarboxylate metabolism. Methane metabolism none EC:1.2.1.2 YPO4057 ATGTCACTGCAAACTCAAGACATTATCCGG 70 43 TCATTTCCGCGTTTCCCCTTCG 71 55 255 fdoH formate dehydrogenase-O; iron-sulfur subunit Energy Metabolism Respiration 1.B.7.b Anaerobic [24] Glyoxylate and dicarboxylate metabolism. Methane metabolism none EC:1.2.1.2 YPO4058 TTGCCGTCAGAAAAACAGCCGG 70 55 TCATACTTTTCTGCTTGCACTTTCATTTTGGA 70 34 429 fdoG formate dehydrogenase-O; major subunit(pseudogene) Energy Metabolism Respiration 1.B.7.b Anaerobic [24] Glyoxylate and dicarboxylate metabolism. Methane metabolism none EC:1.2.1.2 YPO4060 GTGAGCCAGATCAAACCTTCGAGATTATCC 70 47 TTATTTTATTCTCTGCGGATGAGTATACACCGTCG 71 40 825 fdhD putative formate dehydrogenase Energy Metabolism Respiration 1.B.7.b Anaerobic [24] none YPO4061 ATGATTATGAGTTATTCACTGCCATCACTGCCT 70 39 TTACTTGGCTTGAGCGAAACGCG 69 52 630 sodA superoxide dismutase [Mn] Cell processes 4.G Detoxification [10] none YPO4062 TTTTTCCTAATGTTGCTATTGGTCGGGGTCAT 72 41 CTGCTGGTTGATCCGATGGTCTTCTGG 73 56 255 tar cheM methyl-accepting chemotaxis protein II Cell processes 4.D Chemotaxis and mobility [86] none YPO4063 ATGGCGGTTAAAAAGATAACCC 60 41 CTAGAAATCATAATCATTAATAACGTCTAAAAGA 60 24 333 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4064 ATGACAAATCGAATGAAAGCTTTAATGTTAGTGAC 67 31 CTACTTGTAGCTGGCAGAGCCAATAAACTGAGA 70 45 477 none hypothetical protein Other 5.I Unknown [1066] none YPO4065 ATGAAAGAACATGCAGAAATCAAACGTTTAAGC 69 33 TTTTTAGCGTAGCCTGTCACTTCTTTCAGGC 70 45 357 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO4066 AAAAACAAGCATTTGAGAATCGGGTTCTTG 69 37 TTAACCTTGACTTAATGGCGAGAGCTTAGAGACC 70 44 555 mtlR mannitol operon repressor Broad regulatory functions 2 Broad regulatory functions [235] none YPO4067 ATGAAAGCATTACATTTTGGCGCAGG 69 42 TCAGTGCGCCAGCTTCTGCTG 69 62 255 mtlD mannitol-1-phosphate 5-dehydrogenase Degradation 1.A.1 Carbon compounds [66] Fructose and mannose metabolism none EC:1.1.1.17 YPO4068 AATATGGTCATGCCCAATATCGGCGCATTTAT 73 41 CAATCACCGAGTCGTCATCCAGTGCGTTA 74 52 255 mtlA PTS system; mannitol-specific IIABC component Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] Fructose and mannose metabolism none EC:2.7.1.69 YPO4070 ATGATTTTTGCATTGAACACCGTCCG 70 42 TTACTGCATTACCTTCATCACGCGCTTT 69 43 720 yiaF putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4071 AAGGCTCTTCGTTCTCTGGCCGAAT 70 52 AACCTGCAAGAACAGTTCGCGGAGT 70 52 255 glyS glycyl-tRNA synthetase beta subunit Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] "Glycine, serine and threonine metabolism. Aminoacyl-tRNA biosynthesis. Aminoacyl-tRNA biosynthesis" none EC:6.1.1.14 YPO4072 ATGCAAAAGTTTGATACCAAGACCTTTCAGG 69 39 TTAGTTCTGATTCTTTTTGCACATAGGGAAGCC 70 39 255 glyQ glycyl-tRNA synthetase alpha subunit Macromolecule metabolism Synthesis and modification of macromolecules 3.A.5 Aminoacyl tRNA synthetases and their modification [40] "Glycine, serine and threonine metabolism. Aminoacyl-tRNA biosynthesis. Aminoacyl-tRNA biosynthesis" none EC:6.1.1.14 YPO4074 ATGAGCTTGCAACGCTGTGGTTG 68 52 TCATTTCACTGCATTATCTGGGTGGCA 70 44 573 tag DNA-3-methyladenine glycosylase Macromolecule metabolism Degradation of macromolecules 3.B.2 DNA [16] none YPO4075 ATGATTCGAGTCTACCAACCCGACGA 69 50 TTAATGTGCGGGATGTTGCCAATG 69 46 456 none putative acetyltransferase Other 5.I Unknown [1066] none YPO4076 AAAAACGTATTCTGGCTCCTGTGGCC 69 50 TTACAGTGGGCTTAAGGTGATTTCAACCC 69 45 660 yiaD putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4077 ATGAATATTGATCATGGGGCCCGC 70 50 TTATTCGGGGTGAATGCGGTAAGTACAC 69 46 645 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO4078 ATGAAACCTTCTATTGTGTTGTACAAAAGTATTCC 65 31 TTAGTGAGTTATTAGCACCTGTGGGTTTACACAGT 68 40 255 none putative D-isomer specific 2-hydroxyaciddehydrogenase Other 5.I Unknown [1066] none YPO4080 GATGGCGAACTGGTCCCTACAGCAT 70 56 AACGACCAGAACCTTATCGCCCTGA 69 52 255 malS alpha-amylase protein Macromolecule metabolism Degradation of macromolecules 3.B.4 Polysaccharides [13] Starch and sucrose metabolism none EC:3.2.1.1 YPO4081 ATGAAAAATAGAATCGCATTCCTAATAG 60 29 CTAATTATCAGCTTTAGAAAATATATTTATCACTT 59 20 444 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4082 ATGGCGATATTTTCACGCAGTCAGAAGA 70 43 CAGTAAGTTGTTTCGCTTCCTGAAACGCTCGTT 73 45 255 avtA valine--pyruvate aminotransferase Amino acid biosynthesis 1.D.6 Pyruvate family [17] "Valine, leucine and isoleucine biosynthesis" none EC:2.6.1.66 YPO4083 GTCGCCGTATTGGGGTTATGGATCGGTA 73 54 AACGTCCAGAACAATACCGCCAATATCTGTGGT 73 45 255 yidE putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4084 ATGCGTAATTATGATTTGTCACCTTTACTTCGTCA 70 34 TTACTGCTGATCAGGTGCCTCCGG 70 58 465 ibpB hslS htpE heat shock protein Other 5.F Adaptions and atypical conditions [36] none YPO4085 ATGCGTAATTCCGATCTTGCTCCATTGTAT 70 40 TTACTTAATTTCAATACGGCGTGGTTTCAAACTTT 69 31 414 ibpA hslT htpN heat shock protein Other 5.F Adaptions and atypical conditions [36] none YPO4086 ATGAGAAATATCGTTATCCCTTTTGCTACTGGCT 69 38 CTATTGTTTTGGCGTATCACCTGTCTGATTAGTTT 69 37 339 none putative lipoprotein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4087 ATGAACGATGATAACGGTGTGGTGCA 70 46 CTAATCAGCATGCACAGTAAAAATTTGTGCC 69 39 315 none conserved hypothetical protein (pseudogene) Other 5.I Unknown [1066] none YPO4089 ATGAATACGTTGTTTGATGCCATCAGAGAGG 70 42 TTAGCATCCGCTGACAGCTCCCA 70 57 255 none pyridoxal-phosphate dependent enzyme Other 5.I Unknown [1066] "Glycine, serine and threonine metabolism" none EC:4.2.1.16 YPO4090 AAAAATTCTCGACAAGTTCGATGCGGA 70 41 TCACAACACCCCCTTTTTATCTCCCAG 69 48 255 none putative ornithine cyclodeaminase Other 5.I Unknown [1066] none YPO4093 ATGGCTATTGAACTGATCGCTATTGATATGGATG 70 38 TCAGCCAATATACTTCTCAATCGCAGTCG 69 45 810 none putative haloacid dehalogenase-like hydrolase Other 5.I Unknown [1066] none YPO4094 TGGTATTCGAGGTTGTGGACAACGC 69 52 CCGTCTTCGATTAAGCCACGCAGTT 69 52 255 gyrB parA nalC acrB pcbA himB hisU DNA gyrase subunit B Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO4095 ATGTCGTCATGCCAATGCGTTTGTAGT 70 44 TTAATCCTGTGGTTGAACCTCTATTTTGCCA 69 39 255 recF uvrF DNA metabolism protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO4096 ATGAAATTTATCATTGAACGTGAGCATCTGCTAAA 70 31 CTACAAACGCATTGGCATGACGACA 69 48 255 dnaN DNA polymerase III; beta subunit protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] DNA polymerase none EC:2.7.7.7 YPO4097 CAGTGTCTTGCCCGATTGCAGGATGAGT 74 54 TTCTGATTAAGTTAGAGAAATCTTCTTTGATGTCG 66 31 255 dnaA chromosomal replication initiator protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.7 DNA replication; restriction/modification; recombination and repair [77] none YPO4098 TTGTTTTTTACTGCTGATTTTTTACGA 61 26 TTATGGATCCTTAACGATGAGGTC 61 42 210 none hypothetical protein Other 5.I Unknown [1066] none YPO4100 CTTTCCAACCGTCCGTATTGAAGCG 70 52 TTACTTAGAAACAGTCAGACGAGAACGGCTTTTC 69 41 141 rpmH ssaF rimA 50S ribosomal protein L34 Macromolecule metabolism Synthesis and modification of macromolecules 3.A.2 Ribosomal protein synthesis and modification [59] Ribosome none YPO4101 GTGGTTAAGCTCGCATTTCCTAGGGAGTTAC 69 48 TCAGGATGCGGGAGCCTGG 69 68 360 rnpA ribonuclease P protein Macromolecule metabolism Degradation of macromolecules 3.B.1 RNA [13] none YPO4102 TCTGCTGTTCGTGTCTTTCATGATCTGGCA 74 47 CCACGTTTTTCCAGACCACGATAAATCAGCTGTT 74 44 255 yidC probable membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] Protein export none YPO4103 ATGAGCACCACTGATACTATCGTGGCC 69 52 TCATTTTCCGATACAGAAACTGGAAAAA 65 32 255 thdF trmE putative thiophene and furan oxidation protein Macromolecule metabolism Synthesis and modification of macromolecules 3.A.9 RNA synthesis; RNA modification and DNA transcription [29] none YPO4104 ATGATTATAAAACCACGTGTACGCGGCTT 69 41 TTAACCCTGAATCAAGTTAGGGATTTTTACATCAG 68 34 255 none conserved hypothetical protein Other 5.I Unknown [1066] none YPO4105 ATGGCCAAGATAGCCGTTG 61 53 TTATTGTTCATTATTTCCCCCCA 61 35 276 none putative exported protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4106 ATGGCAAGAGAAATTTACGATCC 61 39 CTATATCCGATAGAAAAAAATAATACAAAACTTT 60 21 621 none hypothetical protein Other 5.I Unknown [1066] none YPO4107 ATGATTTTTGTTATAGGATATGCCCCGACTATCAC 69 37 AAACGCAATTTTCAGCATAAACAGTAGCGCC 72 42 255 yieG Xanthine/uracil permeases family protein Cell processes Transport/binding proteins 4.A.3 Carbohydrates; organic acids and alcohols [116] none YPO4108 ATGTTCGATTGCGATGGCACCTTG 70 50 TTAATCGCGGGTGATATGCCAGC 68 52 648 none putative haloacid dehalogenase-like hydrolase Other 5.I Unknown [1066] none YPO4109 ATGGATTTTACCATTATCGTTGATAACTGGCGT 70 36 TTAACTCGATTGCAGTGTTAGCTTGTTACACCA 70 39 756 none putative amino acid transport system permease Cell processes Transport/binding proteins 4.A.1 Amino acids and amines [61] none YPO4110 ATGAATCTACATCATCTGACTGATTGGCTATTAGC 68 37 TCAGTGCCCTCGGACGACGG 71 70 738 none ABC transporter permease Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO4111 AAAAAGTGCAATAGCCTTAACGCTACTCGCG 71 45 TTACGCTTTAGGCTGTTGGTCTAACGGG 70 50 855 none putative periplasmic solute-binding protein Cell processes Transport/binding proteins 4.A Transport/binding proteins [125] none YPO4112 ATGAGCTTTTACATACGCAAGAACA 61 36 TCAAGAAACGTTACTGCTGTGCT 61 43 none putative membrane protein Macromolecule metabolism Cell envelope 3.C.1 Membranes; lipoproteins and porins [561] none YPO4113 ATGGATAATCTGAATCTAAATAAACATATTTCCGG 66 29 TTATTTTTCAGGCTTACCAGAGAGTAACTTCTCTA 65 34 723 phoU nmpA putative phosphate transport system protein Central intermediary metabolism 1.C Central intermediary metabolism [63] none YPO4114 ATGGCTACTGACGTCACCAACAGTAAAATTCA 70 41 TCAACCATAGCGACCAGTGATATAATCTTCTGTCT 70 40 771 pstB phoT putative phosphate transport ATP-bindingprotein Cell processes Transport/binding proteins 4.A.5 Anions [14] none YPO4115 ATGGTGACCATAGATATGCGAAATGATGC 69 41 TTAGTGCTTTTTCTTAGCAAAAATAACCCGGG 69 37 888 pstA phoT putative phosphate transport system permease Cell processes Transport/binding proteins 4.A.5 Anions [14] none YPO4116 ATGAGAAGAGAGTCTATGGCTGCGTACAAGC 69 48 TTAACGCCCCTCGTTCTTAGCCAGAC 69 54 255 pstC phoW putative phosphate transport system permease Cell processes Transport/binding proteins 4.A.5 Anions [14] none YPO4117 ATGAAACTGATGCGTACCACCGTAGCC 70 52 TCAGAAGATTGGCTTGCCGCTG 68 55 255 pstS phoS putative phosphate-binding periplasmic protein Cell processes Transport/binding proteins 4.A.5 Anions [14] none YPO4118 CTGAGATTCTGATCGAAGGCTTACGTCGCCT 74 52 GCCTTTAATCAGCGCGACATGATAAGACAGTAGCT 73 46 255 glmS glucosamine--fructose-6-phosphateaminotransferase Central intermediary metabolism 1.C.4 Amino sugars [5] Glutamate metabolism. Aminosugars metabolism none EC:2.6.1.16 YPO4119 TGTCGTCATCCTTGCCGCGGGTAA 74 58 TTACTTTTTCTTTACCGGGCGCTTCCAT 70 43 255 glmU UDP-N-acetylglucosamine pyrophosphorylase Central intermediary metabolism 1.C.3 Sugar nucleotides [11] Aminosugars metabolism none EC:2.7.7.23 YPO4120 ATGGCTGCAATGACTTACCATCTGGATG 70 46 TTACATCGCTTTCTTGGTTAGCTCAATTACGC 70 41 423 atpC uncC papG ATP synthase epsilon subunit protein Energy Metabolism 1.B.9 ATP-proton motive force [9] Oxidative phosphorylation. ATP Synthesis. Photosynthesis none EC:3.6.3.14 YPO4121 GGCTACTGGAAAGATTATCCAGGTAATCGGCGC 74 52 CTTGGCTTTTTCCACTGCTTCTTCAATGGTACC 73 45 255 atpD uncD papB ATP synthase beta subunit protein Energy Metabolism 1.B.9 ATP-proton motive force [9] Oxidative phosphorylation. ATP Synthesis. Photosynthesis none EC:3.6.3.14 YPO4122 ATGGCCGGCGCAAAAGAGATAC 68 55 TTAAACCGCGGAGGCTCCCC 69 65 864 atpG uncG papC ATP synthase gamma subunit protein Energy Metabolism 1.B.9 ATP-proton motive force [9] Oxidative phosphorylation. ATP Synthesis. Photosynthesis none EC:3.6.3.14 YPO4123 GCGAAGCTCACAATGAAGGTACTA 62 46 GGACTGGGTTGCCTTAAATGTATC 62 44 ~1400 "atpA, uncA, papA" ATP synthase alpha subunit protein Energy Metabolism 1.B.9 ATP-proton motive force [9] Oxidative phosphorylation. ATP Synthesis. Photosynthesis atpAuncApapA EC:3.6.3.14 YPO4124 ATGTCTGAATTTGTAACTGTAGCTCGCCCC 70 47 TTAAGACTGCAAGACGTCTGCCAGG 67 52 534 atpH uncH papE ATP synthase delta subunit protein Energy Metabolism 1.B.9 ATP-proton motive force [9] Oxidative phosphorylation. ATP Synthesis. Photosynthesis none EC:3.6.3.14 YPO4125 GTGAATCTTAACGCAACAATCCTCGGC 70 48 TTACAGTTCAGCGACCAGTTTATCAACGATG 69 42 471 atpF uncF papF ATP synthase subunit B protein Energy Metabolism 1.B.9 ATP-proton motive force [9] Oxidative phosphorylation. ATP Synthesis. Photosynthesis none EC:3.6.3.14 YPO4126 ATGGAAAACCTGAATATGGATCTG 60 38 TTACGCGACAGCAAACATCA 61 45 240 "atpE, uncE, papH" ATP synthase subunit C protein Energy Metabolism 1.B.9 ATP-proton motive force [9] Oxidative phosphorylation. ATP Synthesis. Photosynthesis none EC:3.6.3.14 YPO4127 ATGTCTGCATCAGGAGAAATCTCTACTCCAAG 69 44 TCAGTGCTCTTCGGATGCCATCG 70 57 825 atpB uncB papD ATP synthase subunit B protein Energy Metabolism 1.B.9 ATP-proton motive force [9] Oxidative phosphorylation. ATP Synthesis. Photosynthesis none EC:3.6.3.14 YPO4128 ATGCCTGTATCCCTTTACAGTGGGAAAATTG 70 42 TTAAGTACGGTGACCGTTAATCACGGCC 70 50 384 atpI uncI ATP synthase protein I Energy Metabolism 1.B.9 ATP-proton motive force [9] none YPO4129 AAAAATTAGACTCTCTGCTTACCGTTGCTGGTATT 69 37 TTAGTTTGACTTAAGAATAATCAAATGCCGCTCTC 68 34 621 gidB glucose inhibited division protein B Cell processes 4.C Cell division [24] none YPO4130 ATCATCATCGGTGGTGGCCATGCA 74 54 CTGAAATTCGGGATGCCTGACCAATTGAACT 74 45 255 gidA glucose inhibited division protein A Cell processes 4.C Cell division [24] none none Plasmid pPCP1_Y.pestis CO92 (AL109969) none ORF Forward Primer (FP) FP_Tm FP_GC Reverse Primer (RP) RP_Tm RP_GC PCR fragment size(bp) Function none YPPCP1_01 TTGAGACAGTTATGGAAATTAAAATCCTGC 65 33 TCACGCCACTCCTCTGCAGAATGAG 71 56 255 IS100 transposase none YPPCP1_02 TGATGATGGAACTGCAACATCAACGA 70 42 TCAGGATTAGCTTCTGCTATAACCCCGG 69 50 783 IS100 ATP-binding protein none YPPCP1_03 GTGAACAAACAACAACAAACTGCGCTGAATAT 70 37 TTATGTTCCTGTTTCACTTTCGGCTTCAAAG 70 39 195 Plasmid replication regulatory protein none YPPCP1_04_pim ATGATCTCAAAGTTATTTTGCTTGGCTCTCATATT 68 31 TTAATGATAATATACAGTGCAACCAGGGATAGATT 66 31 426 Pesticin immunity protein none YPPCP1_05c_pst TGTCAGATACAATGGTAGTGAATGGTTCA 66 38 CAATCCACTATCGATATCTTTTTGCACCA 68 38 255 Pesticin none YPPCP1_06 ATGAAATTTCATTTTTGTGATCTGAATCACTCTT 67 26 TTATGGTAAATCTTCCCGTTCCTGCCC 70 48 417 Unknown none YPPCP1_07_pla TGAAGAAAAGTTCTATTGTGGCAACCA 66 37 TCAGAAGCGATATTGCAGACCCGC 70 54 255 Plasminogen activator none YPPCP1_08c ATGAGAACATTAGATGAGGTGATTGCCAGTC 69 42 TTAGACATGGAACGCTACTCTCCTTCCTGTAGG 71 48 300 Probable transcriptional regulator none YPPCP1_09c ATGTGGATGGTACTTTTTAGCCAGCGATTT 69 40 TTACTTGCTCTCCAGTGTGTTCAGATGTGC 70 47 348 Unknown none none none Plasmid pCD1_Y.pestis KIM (AF074612) none ORF Forward Primer (FP) FP_Tm FP_GC Reverse Primer (RP) RP_Tm RP_GC PCR fragment size(bp) Function none Y0001 TTGCATCAACAGAGCCGGGGA 70 57 TCACCAATGGAAAGAGTAAAGGTCAATCACC 70 42 312 Unknown none Y0002 ATGGATACAAAGTTATTACAACACACCCCCATC 69 39 TCAGTACGACGAACGCCAGTCAGTTC 70 54 369 Endonuclease none Y0003_repB ATGTCGCAGATCGAAAATGCAGTAACTTCC 71 43 TCAAGCTGCATTAGTTCTAGCGGCCTTT 70 46 255 "RepB, replication protein" none Y0005_repA TGACTAACCACCAGGCCCTGTTCAC 69 56 AGGTAGCGCCGGTGGCCAAC 71 70 867 "RepA, replication protein" none Y0006c_orf5 ATGAGATCGCCGCTCGCTTACG 70 59 CTATCGGCGCCAATTGTCAACAGAGTTAT 70 45 219 Unknown none Y0008_orf7 GTGATTAACACCACCTTTACTGAGTTACTCCCAAA 69 40 TTAACCGATTGAGTAGATTGAGTATGAAGGGGC 70 42 429 Unknown none Y0009_ypkA GTGGCTGAAACCGATAAGTTTGCCG 70 52 TCGGCCCAAGAACCTGAACGATTAA 70 48 255 "YpkA, secreted protein kinase" none Y0010_yopJ CGGACCAATATCACAAATAAATATCTCCGG 68 40 TTATGTACCGAAACTGATAATTCCTTTCCA 65 33 867 "YopJ, targeted effector protein" none Y0012 GTGGCCGTAGGCCGCAAGAAC 70 67 TTAGCTGAAGCGGTTTTCGGCGTAA 70 48 207 Unknown none Y0013_yopH TGAACTTATCATTAAGCGATCTTCATCGTC 66 37 GCTATTTAATAATGGTCGCCCTTGTCC 66 44 255 "YopH, targeted effector protein" none Y0017c_lcrT ATGACGGAATATCAGGCCAGTGAACG 70 50 TCATCCGTCGTTGACAAAAATCTCCACTA 70 41 405 Putative transposase none Y0018c_lcrS ATGAAGAAAGCACGTTTTACTGAAACTCAGATCC 70 38 TTTTTGCCACGACATCCTTAAGAATTTCATGAT 71 33 267 Putative IS element protein none Y0019c_lcrQ TGAAAATCAATACTCTTCAATCGTTAATAAATCAA 65 23 TCAGCCGTCAGCCGCCGTAT 70 65 348 LCR negative regulator none Y0020c_yscL ATGTCACAAACTTGTCAAACAGGTTACGCC 70 43 CATTTGTCCTAAAGTGGTAGATATTGCCCG 68 43 666 Type III secretion component none Y0021c_yscK ATTACCTCTTTTCAATTGCGCTTCTGCC 69 43 TTATTTGAACAAATGGCTGCATGTAGGC 68 39 630 Type III secretion component none Y0022c_yscJ AATCTTGTTTTTAACTGGTTGCAAAGTTGA 66 30 TCACTTCTTGCGTTGTAACCAAAAATATTG 67 33 735 Type III secretion component none Y0023c_yscI ATGCCGAACATAGAAATAGCTCAGGCC 69 48 CCCCCTTCGACAAGGTTTCAACATTTT 70 44 348 Type III secretion component none Y0024c_yscH ATGACGGTTACCCTTAATAGAGGTTCCATTACATC 69 40 TTATGTATCCATATCAATTTGATGGCTGTTATGAA 68 29 498 Secreted protein none Y0025c_yscG TGAAATATAAACTCAACGTACTGTTAGCAGAGATT 65 31 TCATGTTTTTAGTTGCTCCCTCATTCCATTC 70 39 348 Type III secretion component none Y0026c_yscF ATGAGTAACTTCTCTGGATTTACGAAAGGAACCG 70 41 TTATGGGAACTTCTGTAGGATGCCTTGCAT 70 43 264 Type III secretion component none Y0027c_yscE ATGACACAATTAGAGGAGCAACTGCATAACGT 70 41 TTATTTTAGGTCTCCTGCTACATAATGAATAATGG 66 31 201 Type III secretion component none Y0028c_yscD TTGGGTCTGTCGTTTTTATCAAGGGA 67 42 TCATCGAGGTTTACCTCCATTGAGTTGG 70 46 255 Type III secretion component none Y0029c_yscC ATGACAAAGTTTCCGGCCAGTTTGA 69 44 CTCAGCCATTTCTGCACTTCTTGCG 70 52 255 Type III secretion component none Y0030c_yscB AAAAACTTGGCAGCCAGTTTAGGAAGAAAAC 69 39 TTAATTCCACCCCACGCGAGACG 71 57 414 Unknown none Y0031c_yscA ATGAGCCAAATTTCAACGAAACATAGAACAGTATT 69 31 ATAAACCAGATAAGCTATATTGATTATTAAACAAC 60 23 99 Unknown none Y0032c_lcrF ATGGGTCACACCTATATTTAAGGTTGTTGA 65 37 TAGCCTGTGGTTGCTATTTTAGTAAGACGG 67 43 816 LCR activator none Y0033c_yscW GTGAGTCGTATTATAGCACTCATCATTTCTTTTCT 66 34 CTATCTGGTATTAGGTAACTGGCAATTTGGATAAC 67 37 396 "VirG, Yop targeting lipoprotein" none Y0034c_yscU CGGAGAAAAGACAGAGCAACCCACC 70 56 TTATAACATTTCGGAATGTTGTTTCTCGA 65 31 255 Type III secretion component none Y0035c_yscT TGATAGCGGATTTAATCCAAAGACCATTGC 70 40 TTATAGGATCCATAACCAACAGCATTGC 66 39 786 Type III secretion component none Y0036c_yscS ATGAGTCAAGGTGACATAATTCACTTCACCAGTC 70 41 TCATCTTATGCCTTGTATCTTCATCATGGTCATT 70 35 267 Type III secretion component none Y0037c_yscR TGATCCAGTTACCGGATGAAATTAATCTC 66 38 ACCCTCCGTAGCTAATCACCAGCCC 70 60 654 Type III secretion component none Y0038c_yscQ TTTGTTAACCTTGCCACAGGCCAAA 69 44 TCATGAAATCGTAACCTCTGTCAGGCG 70 48 255 Type III secretion component none Y0039c_yscP TGAATAAAATCACCACTCGTTCCCCA 68 42 TCATTCTTCAGCCTCCCACTCCTCA 69 52 255 Type III secretion component none Y0040c_yscO ATGATACGCCGCCTGCACCG 71 65 TTAGGCGTTCCTGTGATGCTGTAGAAACTCT 70 45 465 Type III secretion component none Y0041c_yscN TCAGATACCTCATCATATTCGTCATGGCA 69 41 TCATTGGGTCAGCGTCTCCAATAAG 67 48 255 Yop secretion ATP synthase none Y0042_lcrE CGACGCTTCATAACCTATCTTATGGCA 67 44 CAGAAAGGTCGTACGCCATTAGTTTTACCC 69 47 882 Secretion control protein none Y0043_tyeA ATGGCGTACGACCTTTCTGAGTTTATGGG 71 48 TCAATCCAACTCACTCAATTCTTCCTCTTCACT 70 39 279 Yop secretion and targeting control none Y0044_sycN GTGAGTTGGATTGAACCCATCATTTCCC 71 46 TCACGGCGCAAGCACCTCTTG 71 62 372 YopN chaperone none Y0045_yscX GTGAGTCGCATAATAACTGCCCCC 67 54 TCATACTTTGTGCAACAGGTTAAGGATTATTTGCA 71 34 369 Type III secretion component none Y0046_yscY ATGAATATTACTTTAACCAAACGACAACAGGAGTT 67 31 TCATGGGGATTCATTATGATCTTTCAACTCC 70 39 345 Type III secretion component none Y0047_lcrD GCGCGACGATAGAAAAAGAAAGCCA 70 48 AATCAGTTTGCGCACATAGCGACGA 71 48 255 Secretion protein none Y0048_lcrR ATGATGGCAGATCCTTTAATTCCGTGG 69 44 TCAGGCAAAGCCGTTGTTTTGTCG 71 50 441 Unknown none Y0049_lcrG ATGAAGTCTTCCCATTTTGATGAATATGACAAAA 69 29 TTAAATAATTTGCCCTCGCATCATCGTTG 70 38 288 Yop secretion and targeting control none Y0050_lcrV TGATTAGAGCCTACGAACAAAACCCACA 68 43 TTACCAGACGTGTCATCTAGCAGACGTTG 69 48 255 "V antigen, major virulence factor" none Y0051_lcrH TGCAACAAGAGACGACAGACACTCA 67 48 TGGGTTATCAACGCACTCATGTTCCA 70 46 507 YopBD chaperone none Y0052_yopB AGTGCGTTGATAACCCATGACCGCT 70 52 TTAAACAGTATGGGGTCTGCCGGCC 71 56 255 Yop targeting protein none Y0053_yopD TGACAATAAATATCAAGACAGACAGCCCA 67 38 CAGACAACACCAAAAGCGGCTTTCA 70 48 255 Yop targeting negative regulator none Y0056c_Orf54 TTGAAACGATATCAATTTACGGATGCCG 70 39 TTATTCAGGTATTTGACTTGCCGCTGCTTT 70 40 324 Unknown none Y0058 ATGAATAGCCTCAGTTTTCATGACAACTCCATTT 70 35 TTAGTCTGCTTTATTATTGGTATAGGTATTGGCAC 66 34 210 Unknown none Y0059_yopM TTTTGCAAGAACCATTACGTCATTCTTC 66 36 TCTTCAAGTTTGTCTGTAGTCTCATGAGCA 66 40 255 Yop targeted effector protein none Y0061c ATGGGGCCAACAATATCCAGTGGTACTC 70 50 TCAATGGCATTTGTCATGTAAATGACCT 67 36 120 Unknown none Y0062c_Orf60 ATGAGTAAAATCACGACTCTCATTATTTGCAGCA 70 35 TTAACGTTCACAGAAGATATCATTCTGCATAGCTC 69 37 420 Unknown none Y0063_Orf61 TTGCAGCATCCCGTATCTTTTCCTTCTT 70 43 AGATATGGTTTATATAATAACTCATTTGTT 55 20 390 Unknown none Y0064c_sycT ATGCAGACAACCTTCACAGAACTTATGCAAC 70 42 TCAGATGAATAATATGGGTGATGTCGAGTTGG 70 41 399 YopT chaperone none Y0065c_yopT GAACAGTATTCACGGACACTACCATATTCA 65 40 AACCTCCTTGGAGTCAAATGTTAACACTC 66 41 255 Yop targeted effector protein none Y0066_yopK ACTTATAACATGCGTGCTTTATGTACCGC 67 41 TCATCCCATAATACATTCTTGATCGCAGG 69 41 549 Yop targeting protein none Y0067_ylpA_ GTGAAAACGCAGATGAGTGAAACGA 67 44 GGATATTAGCGATAGACTTCGCTAGCTGG 67 48 630 YlpA' lipoprotein pseudogene none Y0068_OrfA TTGATAATGACTCAACCTAAACAGACCAAACGC 70 39 TTAACGCAAAGATTTGATGGGGAACTCG 71 43 324 "IS1616 OrfA, unknown function" none Y0070 GTGATGCAGAGTATGAGCCGCAGG 69 58 TCACAGGGCGGTAATCCACCATTG 71 54 198 Unknown none Y0071_sopA TGGACCTAAAGTCAACTCTTGACCGCTG 70 50 GCATTCTCCCAACGAGGCTTAACCA 70 52 255 sopAB transcription repressor none Y0072_sopB TGAAAAGGTCACCAGTGTTACGTAATGCG 70 45 CAAAGAATGTTCCTTTGCATAGGTATTCA 65 34 255 plasmid partitioning control protein none Y0074_Orf73 ATTACTCAGTAATACATAACGGAGGGGATATGGCT 69 40 TTATACACTAGTATCTTTCACCGCAGCAGAAAAA 68 35 276 Unknown none Y0075_Orf74 TGTATAAACTGTCTGAACTAGCTGATGAGGATATT 65 34 CTACTCATGCTCTGGAAAATCCTGAACATCT 68 42 300 Unknown none Y0076c_Orf75 ATGGATAAAAACAAGGGGATAGTGTTTCCCC 70 42 TTAGGGGCTGAGTGTAACTGGATTTGCTCT 70 47 297 Unknown none Y0077c_yopE CATCATTTATTTCTACATCACTGCCCCTGC 69 43 TCACATCAATGACAGTAATTTCTGCATCT 65 34 660 Targeted effector none Y0078_sycE TGTATTCATTTGAACAAGCTATCACTCAATTATTT 65 26 TCAACTAAATGACCGTGGTGGTGAGATTAGTG 71 44 393 YopE chaperone none Y0082_sycH ATGCGCACTTACAGTTCATTACTTGAAGAATTTG 69 35 TTAAACCAGTAAATGAGATGATGAAGGACGATGA 70 35 426 YopH chaperone none Y0084c ATGAAAAAGACGCGTTATACCGAAGAACAAATC 70 36 TTTTTCGGATGACATCCTGCAGCA 70 46 267 Putative IS1617 transposase none Y0085c_Orf84 TTTGCAAAATACTACTTTGATTTATTTTTCAACAA 65 20 TTATTTTAAATTTGTTTTGACTCCTCCAATCTTTG 67 26 330 Unknown none Y0086c_Orf85 TTAGTTTACATAGTTGTGTTCTATCCCTTTGTCTT 64 31 AGAAAAAGTGGAATCTCTTAAGAATATAAAAATGC 64 26 465 Unknown none Y0087c CGACTTTTTGGTTACGCGCGGGTAT 71 52 TTTTTGGCTATTTCTGTCGCGCCC 71 50 552 Tn1000 putative resolvase none Y0091_yadA_ GTGGGCTCTGGTTCAATGGCAACAG 72 56 CCACTCGATATTAAATGATGCGTTGTACA 67 38 255 YadA' pseudogene none Y0093 GTGAAGCGATTTACGCGGCGC 71 62 TCACGTAAAGAGATGCAGAGTGGCCA 70 50 492 putative DNA helicase none none Plasmid pMT1_Y.pestis KIM (AF074611) none ORF Forward Primer (FP) FP_Tm FP_GC Reverse Primer (RP) RP_Tm RP_GC PCR fragment size(bp) Function none caf1 AAATCAGTTCCGTTATCGCCATTGCA 70 42 TTGGTTAGATACGGTTACGGTTACAGCA 66 43 513 "capsular antigen, subunit, F1 capsule antigen" none caf1A TCAAAGCTGTTCCTGTGTGCAGGGT 70 52 TAGCCACTGAAATTAAGCGTCCCCG 70 52 255 "capsular antigen, usher, F1 capsule anchoring protein" none caf1M GTGTTGTCACCATTCCGTAAGGAGG 67 52 AAGTCACATTTTTGGAATACAAACGATCCA 68 33 810 "capsular antigen, chaperone, F1 capsule" none caf1R AATCTCGAGTCGAAATTCATTAACATTGAC 65 33 TGGTAATCCTAATGTTACTGACATTTCCGG 67 40 255 "capsular antigen, regulator, F1 capsule positive regulator" none ymt GCTTGGGGAGCCCCATTTGGTAAAG 72 56 TCATTAATTTGGCGTGATTACCAGGTGC 70 43 255 murine toxin none Y1001c_repA GCGAAAACGGCAATAAAAACATAGCGA 70 41 CTATTTGCGAGCCTTTGCCTTGCG 71 54 255 Replication protein A none Y1002_orf36 ATGGATCTCAAACGCACGCGCT 70 55 AAACGTCTCAGAGGGCTTCTGACGC 70 56 645 Unknown none Y1004c_orf38 TGTTCAGATGCTTGGCTTTAACCGT 67 44 TTGCCTGTTTCTTGCTTGTTTAAGCCC 70 44 255 Hypothetical lipoprotein none Y1005c_orf39 ATGGACCGAGATCTGCGCATTCG 71 57 TTAATATCCCTGATAGATGAGCTTGATTCCCG 70 41 273 Unknown none Y1006_exoA TGACATTGCCATACGGGGTGATATCA 70 46 TCACACTGCCTCCGCACTCTCC 69 64 255 "Putative exonuclease, subunit A" none Y1007_orf42 GTGTCAGGAAATCCTGACCGAAGCG 71 56 TCAAACTTTTTGATTCAAATGCTGGCCTTT 70 33 267 Unknown none Y1008_exoB GTGTCTGTATGGCGAAACTGCGCAT 70 52 CGCTTCTCACCACCAGACAACGTCT 70 56 255 "Putative exonuclease, subunit B" none Y1009_orf44 CGTTTAACTTGAGCCGCACGCAGTT 71 52 TACCACGTAGCCCAGGTTGGGCATT 72 56 747 Unknown none Y1010_orf45 GAGTAAAACCATTCGTGTGGTTGGCG 70 50 ATAAAATCCCTGCAAGCACATCGCG 71 48 570 Unknown none Y1011_orf46 CGGTCTGGCAACTGCAAATGTTCAA 71 48 ACTTACGGCCCGTAAACGGGCTACC 71 60 510 IS200 transposase none Y1012_orf47 TTGCCTTATCCACATTGCGATAATTACACC 69 40 TTAGTGGAGCAAACCGACGTCGATG 70 52 351 Unknown none Y1013_orf48 ATGGCTCAGGCGATACCATCGAC 69 57 TTAAACAATTTGTTTTCTTGTTGGTTTAATTATCG 66 23 234 Unknown none Y1015_orf51 ATGAATTTTATCGCTACTGTTAACACCCCTTCG 70 39 TTACTTGCCAGCCAGGATGTGAATGC 71 50 483 Unknown none Y1016c_orf53 ATGATCCGTGGGCGCTCGC 71 68 TCACATCCTGGCTGGCAAGTAAGAGG 70 54 360 Unknown none Y1017c_orf54 ATGGTTATTTTTATCGCTGGCGTTAACATCC 70 39 TTATTTTTCTAAGTGAATTTTAAAGCCAGCGTTT 67 26 228 Unknown none Y1018c_orf55 AAAAATCTATCATCGACGCTGCTGTAGT 65 39 CGCTTTGAAAGCGTCAGCCAGATAG 69 52 651 Unknown none Y1019c_orf56 TGACATCGATATCCTACCAACGACACTG 68 46 AAAACGGTAAAATCCGTTCGACCCA 69 44 564 Repressor of flagellum synthesis none Y1020c_orf57 ATGAAACACGTTCTACTTCCACTGATTACCATCC 70 41 TCACAGTGTCGTTGGTAGGATATCGATGTC 70 47 423 Unknown none Y1021c_orf58 ATGAGCGAGAAACGCGCTATACACTGC 71 52 TTAATCGAGACGTTTGAGAATATCGGCCA 70 41 279 Unknown none Y1022c_orf59 GCTGATTTCTGGCGCTGATGACAAC 70 52 GAATGTGCTACCCACCGGCAAGACT 70 56 255 Unknown none Y1023_orf60 TGGATTGTATCAGAATTATGGATGTGAAAA 65 30 CATACGCTCCTTGTAGTAGTCGACCAGCC 70 55 699 Rep-like protein none Y1024_orf61 TGGCTGGTCGACTACTACAAGGAGCG 70 58 GCAGCCAGCTCCCCAGAAGAAACTT 71 56 702 Homology with SpoJ of S.pneumoniae none Y1025_orf63 GGGGTAGACGCTTTCGTGGCGTAT 70 58 CAGGCATATTCCACCTTCACGCGTT 71 52 699 Putative ABC transporter none Y1026_orf64 ATGCCTGATTTGAAGATCGTTGAGCTGA 70 43 TCACCTGCGCTCGATATTGGCA 70 55 255 Unknown none Y1027_orf65 TGATCGACATGACAGACATCATCATCA 68 41 TGCCGGTAATGCAATTTCAAGAGGT 68 44 900 Unknown none Y1028_orf66 ATGACGTTGACCGACAAACAAAAAGACATC 70 40 TTACATCACCAGTAATTTGGCTCTGGCAC 69 45 267 Unknown none Y1029_orf68 TGTAGAAAAAGACGAGAGCAAAACTCGCC 70 45 TTAGACGCTCCCATCACTTTCATCACC 69 48 642 Unknown none Y1030_orf69 ATGGCCATCCCGTCGTCTCTGAGT 71 58 TAGATCCACCAAGAATAACACGATTTTTCA 66 33 255 Homology with T4 gene 17 none Y1031_orf70 GACGCCACCCGGAATATGAGAAGAA 70 52 GGTTGATCTTGCCCGCTTTCTTGG 71 54 255 Unknown none Y1032_orf71 ATGAATCTGTGGCAAATGCTTATGGCC 70 44 TCAGCCTGGTGGGTGCGCT 70 68 456 Unknown none Y1033_orf72 ATGACTGTTGGCGCTTCCTTCAGC 70 54 TTACTTGAGTCCGATTTTCCCCAGACC 69 48 372 Myristoylated alanine-rich C-kinase none Y1034_orf73 TGCCATTACTGCGTGATGAAGCTGA 70 48 TCAAATTTTTACGTTGGTCAGCGCG 70 44 876 Unknown none Y1035_orf74A TGCCAGAACAAAAGATGAAGATCACGG 70 44 GCAGCCGGTGCTGCAGTCACTT 71 64 663 Homology with intimin and lambda V none Y1036_orf75 ATGAAACCAGCAAAAATTCGTTTATTGGAGC 70 35 TTACTCACCGCCCTGTGCTTTCAGG 71 56 435 L12 ribosomal protein none Y1037_orf76 ATGGCGCAGATCGACACGTACCGTA 72 56 CACGGCGAACAATCATGCGGTTATT 71 48 834 Unknown none Y1038_orf77 TTGTTCGCCGTGCGTAACGC 70 60 TCAGACCCATATGTTTGCCCCTACTTCC 70 50 459 Unknown none Y1039_orf78 ATGGGTCTGAAGTACGACGCGCA 70 57 TCAACCTCTCGTAAAACCTGCTTTCCTTG 70 45 474 Unknown none Y1040_orf80 GTGTTTATTGAAGCATTTGCGAGCCTGAT 70 41 TTAATTCAACAAATAGCCCGCAAATTCAATC 69 32 384 Unknown none Y1041_orf80A AAAAACATCAAACTTGGCGCCTGCA 71 44 ATTGGGCAGAATTAACCGTTACTGC 65 44 747 Lambda V-like protein none Y1042_orf81 ATGACCAAATTACTCGATCTCGACTCCATTCT 70 41 TTACTTTGCCCCTTCACCAGCCG 70 57 318 Unknown none Y1043_orf82 GTGTCGCCATTAGAGCTGCTGGG 69 61 TCATCCTCTGCCAAAAATTTGCATCAGT 70 39 270 Unknown none Y1044_orf84 GCGTCAGCAATTAGGTGAAGCCGTT 70 52 CTGGTTGGACATTACGCCCTTACCG 70 56 255 Lambda H-like protein none Y1045_orf85 ATGGAAAGACTGACTTTTAACTGGTATCCCGACT 70 41 TTATCCTTCATAAATTTGTCGGAAGGTCGC 70 40 336 Lambda M-like protein none Y1046_orf86 TGTTGGCGCCTCTTTATTTCAAGGA 69 44 ACCCATAACGTGTTGCTCCAATGAA 67 44 732 Lambda L-like protein none Y1047_orf87A TGCAGGAAATCTATCTGACAGCCATCA 69 44 CTCAGACACGTCTCATCTCCCTTGA 66 52 759 Lambda K-like tail fiber protein none Y1048_orf88 TGAGTTAGTTCATGTGCAACTTGGTGGC 70 46 CTAAAGCTGGTCGATGGTGATCGAA 67 48 588 Lambda I-like protein none Y1049_orf89 AGAACAGCATCACTCTCGACGCACC 70 56 TTTGGCCAGAGCCTCGATATTGGTC 70 52 255 Lambda J-like protein none Y1050_orf90 TGGAGAAGGATATTATGGACGAAACCCC 69 46 CTACCGCCGAGCAGAGCCATCC 71 68 633 Unknown none Y1051_orf91 CAGGGGAGACCCAGAAGGAAGTTCC 70 60 CAGGAATATCTGCCCCATTCTGGGA 70 52 255 Lambda ORF314-like none Y1052_orf91A TTTTTCGGCACCTGTTGCAGAAATG 70 44 TCACAAACTATTGGTAAAAACCTTGCCCGATAT 70 36 213 Unknown none Y1053_orf92 TGACTTTCAAAATGACTGATAAAGCGAGA 66 34 TTAATCAAATTTGCCGAATCTTCTTCCTCG 70 37 609 Lambda G-like tail fiber assembly none Y1056c_orf95 ATGGAAAAACTGATCGCCCTAAAGCACA 71 43 TCAGGAGAGCAGACTACCCCCTGGAT 70 58 354 Unknown none Y1057_orf96 GTGTTTAACCTCCATCGGTCGCTCG 70 56 CTACTTCATCGATATGACTGCGCTTATCAAAGAA 70 38 255 Unknown none Y1058c_orf97 ATGTCCACAAGAACAGATTTGTCGAAAATCC 70 39 TCATGTGTTTTCTTTGGTTGCTTCTTCAATG 70 35 477 Unknown none Y1059_orf98 ATGGTCGTTTTGCTCTTCCACTTCTTTGAT 70 40 TCAATAAGTAAGTACACGACTACGGTTAGAAGCA 66 38 342 Unknown none Y1060c_orf99 TGAAAGCAGATATTCAGAAGTCCGTTACCG 69 43 TACCAGGTCGCCCAGCCAGTCATTT 72 56 795 "Hypothetical protein, fragment" none Y1061_orf100 ATGCCTGAGAAAATCTTTAAAGCGCC 67 42 TTTTTCTTTTGCTTCTTTGGTATCTTTTCG 66 30 723 Unknown none Y1062_orf101 CGAAAAGAAACTTAAAGCACTTGCGGC 69 44 TTAAAGGTGATCGCTCAGGCGGTCA 71 52 255 IS285 transposase none Y1063_orf102 TGCAATCATGGGATAAATATCACTCCGG 70 43 AGCTGGCTGAGTACAGCCGGAAATC 70 56 255 Transposase none Y1064c_orf103 GATGGCAGATTATCTGTCTTCACCGCA 70 48 TTACTGAAGAGCAGACAGAAACCTTGAATACCG 70 42 324 "Hypothetical transposase, partial" none Y1066c_orf104 TTGCTGTCCCGGTGTTCTGCTTACAT 70 50 TCACCTATCGTGTGCCCGGAGTTC 70 58 396 Unknown none Y1067c_orf105 ATGGGCTTTCCCCATCGCG 70 63 TCACCACGGCCTATGTGATCTGACA 70 52 309 Unknown none Y1068_orf106 TTGATAATCAGCGAAATGCAACGCAA 70 38 TTACCCAGCGCCCTCGTGTTTC 69 59 471 Unknown none Y1070c_orf108 TGAGATTTAAACTCTCAGTCATCATTTTTGTACTG 66 31 TTACGCCCATAGTCGGTTAAACTCAACCTG 70 47 489 Putative endonuclease none Y1071_orf109 GTGGAGGACGTATCAATGTCGCGTC 70 56 CTAGTCGTTCTCTTTCTCATGTTCATTTAGATGCG 70 40 291 Unknown none Y1072c_orf110 TGTGATAGCATTCACTCATCATTTTTCAGA 67 33 TTAGTGGCGGATTTGCGCCAAAT 70 48 255 Putative transposase none Y1073c_orf111 TGCTCATTTTTGGTTATCTGCGAGCA 69 42 TTACCCCTCAGCTTGCTGGCAGAC 70 58 621 Putative resolvase none Y1074c_orf112A ATGGCGATTGTTATTCAGTACACCAGAACTGT 69 41 TCAAATTCTAATTAGGCGTTTAAAGAGAAGGTTTT 67 29 327 Unknown none Y1075c_orf112 TTGTTATGTGAGGTTGTTATGAAAATTGAAACCA 69 29 TTACAGACCCGCCAGTAGTTGTTCTTTACTGAA 70 42 246 Unknown none Y1078c_orf115 ATGAGTCACGAAGAGGTTGAAAAGCGTG 70 46 TTATGAGTTTTCCCGTATTTCCGCTGAGG 71 45 234 Unknown none Y1080_orf116 GGACATGGCTATTGCAGGTTGCGAT 71 52 TTCGTTTTCTTCAGCTTCCTTTTCATCA 68 36 255 Unknown none Y1083c_orf119 ATGACAGCGCGCCTGACAAAAC 69 55 TTAGTGTCGGGGGATGCTGCTAACA 69 52 309 Unknown none Y1084c_orf122 GCAGGGGCGGACGGCCTTTT 73 70 TCAATTTTCGCCGTCAAACCGTCC 72 50 528 Unknown none Y1085_orf123 TCCCGATTTATCCAGGGTAATTGCG 69 48 TTACGCGGCCTCCGGGAACT 70 65 678 Adenin-specific DNA methylase none Y1086_orf123A ATGAACTATGCAGGACACGAAAAACTCCG 70 45 TTAGTCCTTAAAGCAGGCATCCAGCTCAA 70 45 222 Unknown none Y1087_orf125 ATGCCCTGTTTATGGCGGCATACA 70 50 TTTTTCAGTAATGCGCGAACTTTCGC 70 42 492 Unknown none Y1088_orf126 AGGAAACCACCACGTTAAACGCCCT 70 52 CTACACTGGCCGGATTGCTGACAGG 72 60 780 Unknown none Y1089c_orf127 GTGAAAGCATCGACGTCAGTGAACCC 71 54 TCAAATCCTGGCATGTGGCCAG 70 55 351 Unknown none Y1090_orf128 CACTACGACCACCACACCGGCTGTT 72 60 TCAGTTACCGAAGACATAACCGTCATGGA 70 45 507 Antirestriction protein none Y1091_orf131 ATGAGCGAGGCGCTGGCG 71 72 TTACTGCGGCTTGCGGATACCG 70 59 231 Unknown none Y1092_orf135 TCGGACTGCTGCAGAACCTGATTGT 70 52 GCCTCGACCGTATCGAGTGGACTTC 70 60 255 Unknown none Y1095_orf2 GGGCCGTTGGTGGAGATATAAGTGG 69 56 TCAGTCTTTATCTCCAATACGATCTTCGG 66 41 255 T3 ligase none Y1096_orf4 ATGAGCAATTTGACCTCTTTCGACTGGTG 71 45 TTATTTGTCTGTGACTCGTTCAGTTGCTATCTTTT 69 34 306 Putative C-type natriuretic protein none Y1101_orf12 TGTTCATGCATACAGTTAAAAGGGCTTCA 68 38 TGAGAAATTTACACGAATAAGCTCAGTTGC 66 37 255 Integrase none Y1102c_orf13 ATGGCTACCAACGAAACAGATAGCAAACAAG 70 42 TCATAGTTTCTTGATTGCTTCAACAACCTGATCT 70 35 387 Unknown none Y1103c_orf14 ATGTTTGTTGCTGAGTTCGAAAGTGAAGACA 70 39 TCAGCTTGCATGGTTTGTCAGACAAATCTGATATA 72 37 270 Unknown none Y1106_orf16 CAAATACGCCACGAAATACCCGGAA 70 48 TTCGGCAGAGCGTTTAGGGTTCATC 70 52 255 "DNA polymerase III, alpha subunit" none Y1107_orf17 ATGAATAAAGAGAACACCATGAACGAAGCACA 70 37 TTATGCGACTTTCTTACCAAAAATGTTGGATAGC 70 35 444 Delta insecticidalprotein homolog none Y1108c_orf18 TGGCGCTTTATAACTTCACTCTGACTCTC 67 45 ATGCGCATTCGGCGTGATGAC 71 57 564 RTX toxin I type L homolog none Y1109_orf21 TATAGAAATAAGCTGGAACATATCAAAATGAGTGC 66 31 TTAACGGGGCGAGTGGAAACGTT 69 52 474 Laminin of Homo sapienshomolog none Y1110_orf22 CAACGCGCATAGCGCCAATG 70 60 TTACAGAGCGTCCAGTTCAGCCAGC 70 56 255 "PprB-like, putative regulator" none Y1111_orf23 GTGACCAGTAAGGCGTCTACGGACG 69 60 TCAGCAGTACCTCTCAAATGGCAGAACA 70 46 255 "DNA polymerase I , fragment" none Y1112_orf25 ATGCTGAAATCCATCATTAATGGCGG 69 42 TTAGGCTCCTTTTGATTCGTTGATTCGC 70 43 267 Unknown none Y1113_orf26 ATGGCAAAAGGCAAATCCGCACT 70 48 GCTTCTTCTGTCTCTGCTGGGGACG 71 60 255 Putative RecA-like recombinase none Y1114_orf28 TGAAGAAAGGTTTACTGGCGGTGAC 67 48 TTCAACGCGATAAACGGAGTATTAGCCC 70 46 831 "Putative serine protease, HflC" none Y1115_orf29 ATGAAAAACTACGCTGAAATGACGGACTTTG 70 39 TTTTTCTCCTGCATCAAAAGAAACACGATC 69 37 372 Hypothetical from phage P22 none Y1116_orf31 AAAAACTGTATGACGCGGCCAACG 70 50 TCAGGCTGGTGGAAAGAACTTCTCCA 70 50 411 Natriuretic peptide homolog none Y1117_orf32 ATGAAGATTTTGGTTCGCATTTCATCAAGC 71 37 TCACTCAAAAGTGCTGATGCCTAAAATACGC 71 42 276 Unknown none Y1118_orf33 ATGAAGAAAACAGCCCTGGCTCTGG 69 52 TCAACCAACCTCCTTGCAGTCATCG 70 52 336 Type II fragment none Y1119_orf33A TTGATGGCGGTTACAATGGCAGG 70 52 TCAGTGGATTTTCTTCAGCAGACCCC 69 50 216 none Eukaryotic negative controls "brca1, Mus musculus breast and ovarian cancer susceptibility protein (Brca1) mRNA,U36475" "rad52, MMRAD52H M.musculus (B6/CBAF1J) mRNA for RAD52 homologue, Z32767" "cdc2, MMCDC2MR Mouse cdc2 mRNA for CDC2 kinase, X16461" "dna-PKcs, Mus musculus DNA-PKcs mRNA, D87521" "xrcc1, Mus musculus DNA repair protein (XRCC1) mRNA, U02887" "OCATGL1, Rabbit alpha-1-globin gene to theta-1-globin pseudogene region, X04751" The PCR fragments for microarray were obtained from cloned cDNA of these genes using M13/pUC forward and reverse sequensing primers