R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|9279667|dbj|BAB01224.1| (AB016889) gene_id:MDJ14.7~similar to unknown
protein~sp|P07953 [Arabidopsis thaliana]
Length = 399
Frame 1 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | 399
0 150 300
Plus Strand HSPs:
Score = 353 (124.3 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 72/113 (63%), Positives = 85/113 (75%), Frame = +1
Query: 13 KSQGVRFXAVYSSPLDRARSTAVSVCKEVNFSXEQIQSTDALAEISQGNWEGCLXSXIYT 192
KSQGVRF +VYSSPLDRARS AVSVC+E++F E +QS+DA+ E+S G+WEGC + IY+
Sbjct: 154 KSQGVRFNSVYSSPLDRARSMAVSVCQEMSFPEEHVQSSDAVIEMSLGDWEGCNQAEIYS 213
Query: 193 PEIQGLIDRFXPDFTAPSGESLRQVXFXMIHFLNGTVXAXHXKLL-DLSSHQN 348
PE LI+R PDFTAPSGESLRQV F M+ FLNGTV KL D SS N
Sbjct: 214 PETLSLIERCQPDFTAPSGESLRQVEFRMVQFLNGTVSGVAEKLRSDYSSTTN 266
>gi|8698732|gb|AAF78490.1|AC012187_10 (AC012187) Contains weak similarity to
LIP1 gene product gi|7297743 from Drosophila melanogaster genomic
sequence gb|AE003629 and is a member of the Phosphoglycerate mutase
PF|00300 family. ESTs gb|N38556, gb|Z25988, gb|Z18409 come from
this gene. [Ar>
Length = 567
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | 567
0 150 300 450
Plus Strand HSPs:
Score = 342 (120.4 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 73/130 (56%), Positives = 89/130 (68%), Frame = +1
Query: 10 LKSQGVRFXAVYSSPLDRARSTAVSVCKEVNFSXEQIQSTDALAEISQGNWEGCLXSXIY 189
L S+GVRF +V+SSPLDRARS AVSVC+E+NF E +Q +DA+ E+S G+WE C S IY
Sbjct: 164 LNSEGVRFTSVFSSPLDRARSMAVSVCQEMNFPEEHLQVSDAVVEMSLGDWESCHRSEIY 223
Query: 190 TPEIQGLIDRFXPDFTAPSGESLRQVXFXMIHFLNGTVXAXHXKL----LDLSSHQNDXQ 357
TPE LI+R PDF+APSGESLRQV F M+ FLNGTV KL L + H N +
Sbjct: 224 TPETLSLIERCQPDFSAPSGESLRQVEFRMVQFLNGTVSGLSEKLRSELLPSTQHTNS-R 282
Query: 358 AFAQNXS-HAP 387
F+ S H P
Sbjct: 283 GFSLATSIHRP 293
>gi|7451674|pir||S76530 hypothetical protein sll0395 - Synechocystis sp.
(strain PCC 6803) >gi|1001645|dbj|BAA10376.1| (D64002) hypothetical
protein [Synechocystis sp.]
Length = 212
Frame 1 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | | 212
0 50 100 150 200
Plus Strand HSPs:
Score = 99 (34.8 bits), Expect = 0.0066, P = 0.0066
Identities = 27/75 (36%), Positives = 41/75 (54%), Frame = +1
Query: 25 VRFXAVYSSPLDRARSTAVSVCKEVNFSXEQIQSTDALAEISQGNWEGCLXSXI----YT 192
V + A+++SPL R +TA + K +N IQ D L EI+ G WEG + + +
Sbjct: 47 VSWTAIFASPLHRTMATATPLSKLINLP---IQKRDGLKEIAYGEWEGKTPAEVNQQFHD 103
Query: 193 PEIQGLIDRFXPDFTAPSG 249
++ L D P + APSG
Sbjct: 104 DYVRWLAD---PGWNAPSG 119
>gi|7473626|pir||A75439 probable phosphoglycerate mutase - Deinococcus
radiodurans (strain R1) >gi|6458827|gb|AAF10667.1|AE001959_7
(AE001959) phosphoglycerate mutase, putative [Deinococcus
radiodurans]
Length = 232
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | | 232
0 50 100 150 200
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.024, P = 0.024
Identities = 28/86 (32%), Positives = 46/86 (53%), Frame = +1
Query: 10 LKSQGVRFXAVYSSPLDRARSTAVSVCKEVNFSXEQIQSTDALAEISQGNWEGCLXSXIY 189
L+ GV+ +++S L RA +TA ++ +E+ + + + L EIS G+WEG L I
Sbjct: 62 LRRLGVQAPRIHASDLSRAHATAEALHRELGGT---LATFPELREISLGDWEGHLYDEIA 118
Query: 190 T--PEIQGLIDRFXPDFTAPSGESLRQV 267
PE+ G P+ P GE+ + V
Sbjct: 119 ARHPELHGQFWSGDPECCPPGGETPQAV 146
>gi|11761356|dbj|BAB19263.1| (AB052566) phosphoglycerate mutase
[Thermosynechococcus elongatus]
Length = 414
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 414
0 150 300
Plus Strand HSPs:
Score = 94 (33.1 bits), Expect = 0.13, P = 0.12
Identities = 31/81 (38%), Positives = 47/81 (58%), Frame = +1
Query: 25 VRFXAVYSSPLDRARSTAVSVCKEVNFSXEQIQSTDALAEISQGNWEGCLXSXIYTPEIQ 204
V F SSPL R + TA+++ + Q++ ALAEIS G+WEG + PE++
Sbjct: 240 VPFHHAVSSPLLRPKDTALAILQY--HPHVQLELEPALAEISHGDWEGK-----FEPEVE 292
Query: 205 ----GLIDRF--XPDFTA-PSGESLRQV 267
G ++R+ P P+GE+L QV
Sbjct: 293 AAYPGELERWRTTPALVQMPNGENLEQV 320
>gi|7451673|pir||S77391 hypothetical protein slr1748 - Synechocystis sp.
(strain PCC 6803) >gi|1652573|dbj|BAA17494.1| (D90906) hypothetical
protein [Synechocystis sp.]
Length = 214
Frame 1 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | | 214
0 50 100 150 200
Plus Strand HSPs:
Score = 90 (31.7 bits), Expect = 0.15, P = 0.14
Identities = 25/71 (35%), Positives = 36/71 (50%), Frame = +1
Query: 37 AVYSSPLDRARSTAVSVCKEVNFSXEQIQSTDALAEISQGNWEGCLXSXIYTPE----IQ 204
AVY SPL RAR T +C + ++Q L E++ G WEG +Y + +Q
Sbjct: 53 AVYVSPLQRARQTVQPLCDRLGI---EMQIRPGLREVAYGEWEGLHPDEVYQRDHDLYMQ 109
Query: 205 GLIDRFXPDFTAPSG 249
L D P + +P G
Sbjct: 110 WLTD---PAWNSPPG 121
>gi|11362518|pir||F82627 phosphoglycerate mutase XF1886 [imported] - Xylella
fastidiosa (strain 9a5c) >gi|9106977|gb|AAF84692.1|AE004008_16
(AE004008) phosphoglycerate mutase [Xylella fastidiosa]
Length = 214
Frame 1 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | | 214
0 50 100 150 200
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 0.50, P = 0.39
Identities = 29/74 (39%), Positives = 40/74 (54%), Frame = +1
Query: 46 SSPLDRARSTAVSVCKEVNFSXEQIQSTDALAEISQGNWEGCLXSXIYTPEIQGLID-RF 222
+SPL RA+ TA E + I++ L EIS G+WEG L + I+ + L R
Sbjct: 52 ASPLVRAQYTAQLALGESRAAQLLIEAD--LKEISHGDWEGLLDTEIHAMDPTRLHAWRK 109
Query: 223 XPDFTA-PSGESLRQV 267
P+ P+GESL QV
Sbjct: 110 APETVIMPNGESLHQV 125
>gi|548532|sp|P36623|PMGY_SCHPO PHOSPHOGLYCERATE MUTASE (PHOSPHOGLYCEROMUTASE)
(PGAM) (MPGM) (BPG-DEPENDENT PGAM) >gi|539074|pir||S43214
phosphoglycerate mutase (EC 5.4.2.1) - fission yeast
(Schizosaccharomyces pombe) >gi|629902|pir||S43369 phosphoglycerate
mutase (EC 5.4.2.1) - fission yeast (Schizosaccharomyces pombe)
>gi|407527|emb|CAA53154.1| (X75385) phosphoglycerate mutase
[Schizosaccharomyces pombe] >gi|1314175|emb|CAA97363.1| (Z73100)
phosphoglycerate mutase (EC 5.4.2.1) [Schizosaccharomyces pombe]
Length = 211
Frame 1 hits (HSPs): _____________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 211
0 50 100 150 200
__________________
Annotated Domains:
BLOCKS BL00175A: Phosphoglycerate mutase family 10..29
BLOCKS BL00175B: Phosphoglycerate mutase family 59..71
BLOCKS BL00175C: Phosphoglycerate mutase family 83..114
BLOCKS BL00175D: Phosphoglycerate mutase family 139..190
DOMO DM00691: PHOSPHOGLYCERATEMUTASEFAMILYPHO 6..210
Entrez active site: FORMS THE PHOSPHOHISTIDINE 15
Entrez active site: REQUIRED FOR BINDING CARBOX 66
Entrez active site: BY SIMILARITY. 163
PFAM PGAM: Phosphoglycerate mutase family 11..200
PRODOM PD000730: PMGY(6) PMGM(3) PMGE(3) 3..96
PRODOM PD003480: PMGY(7) PMGM(3) PMGE(3) 99..208
PROSITE PG_MUTASE: Phosphoglycerate mutase famil 12..21
__________________
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 1.2, P = 0.69
Identities = 34/121 (28%), Positives = 58/121 (47%), Frame = +1
Query: 10 LKSQGVRFXAVYSSPLDRARSTAVSVCKEVNF-SXEQIQSTDALAEISQGNWEGCLXSXI 186
LKS+G +F ++S L RA+ T + +EV + E I+S + L E G+ +G
Sbjct: 49 LKSRGYKFDIAFTSALQRAQKTCQIILEEVGEPNLETIKS-EKLNERYYGDLQGLNKDDA 107
Query: 187 ---YTPEIQGLIDRFXPDFTAPSGESLRQVXFXMIHFLNGTVXAXHXK--LLDLSSHQND 351
+ E Q I R D P+GESL+ ++ + T+ K + +++H N
Sbjct: 108 RKKWGAE-QVQIWRRSYDIAPPNGESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNS 166
Query: 352 XQA 360
+A
Sbjct: 167 LRA 169
>gi|11349154|pir||F83486 hypothetical protein PA1280 [imported] - Pseudomonas
aeruginosa (strain PAO1) >gi|9947214|gb|AAG04669.1|AE004557_10
(AE004557) hypothetical protein [Pseudomonas aeruginosa]
Length = 194
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | 194
0 50 100 150
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 1.8, P = 0.83
Identities = 25/82 (30%), Positives = 40/82 (48%), Frame = +1
Query: 19 QGVRFXAVYSSPLDRARSTAVSVCKEVNFSXEQIQSTDALAEISQGNWEGCLXSXIYTPE 198
+G R+ + SSPL R R+ A + + +++ + L E+ G WEG + +
Sbjct: 40 EGGRWDLLVSSPLQRCRAFAEELAQRQGI---ELELENDLRELHFGAWEGRSAAALMDGH 96
Query: 199 IQGLIDRFXPD---FTAPSGESLRQ 264
+ L RF D FT P GE L +
Sbjct: 97 SEAL-GRFWADPYAFTPPGGEPLSE 120
>gi|2135627|pir||I63131 metallothionein old gene name 'MT2' - human (fragment)
>gi|187528|gb|AAA59584.1| (M26637) metallothionein old gene name
'MT2' [Homo sapiens]
Length = 66
Frame -3 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | | 66
0 20 40 60
Minus Strand HSPs:
Score = 63 (22.2 bits), Expect = 2.9, P = 0.94
Identities = 15/32 (46%), Positives = 17/32 (53%), Frame = -3
Query: 97 LPCTPTPPWT-APDPAGTNTRR*TEPPAT*AA 5
+P P PP T AP PA N + PPA AA
Sbjct: 4 IPTAPAPPVTPAPAPAPANAKSANAPPARKAA 35
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.91
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.339 0.150 0.542
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.346 0.153 0.528
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.317 0.132 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.360 0.167 0.632
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.335 0.144 0.503
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.338 0.151 0.505
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 165 149 10. 74 3 12 22 0.092 34
30 0.12 36
+2 0 165 146 10. 74 3 12 22 0.12 33
30 0.11 36
+1 0 166 147 10. 74 3 12 22 0.12 33
30 0.11 36
-1 0 166 147 10. 74 3 12 22 0.12 33
30 0.11 36
-2 0 165 146 10. 74 3 12 22 0.12 33
30 0.11 36
-3 0 165 148 10. 74 3 12 22 0.091 34
30 0.11 36
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 10
No. of states in DFA: 593 (58 KB)
Total size of DFA: 174 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 145.01u 1.17s 146.18t Elapsed: 00:00:25
Total cpu time: 145.04u 1.19s 146.23t Elapsed: 00:00:25
Start: Mon Oct 1 23:13:33 2001 End: Mon Oct 1 23:13:58 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000