BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= AA02285
(416 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15603323|ref|NP_246397.1| PgtC [Pasteurella multocida su... 434 e-120
gi|152979377|ref|YP_001345006.1| phosphoglycerate transport... 434 e-120
gi|62180969|ref|YP_217386.1| Phosphoglycerate transport: pr... 355 3e-96
gi|56412704|ref|YP_149779.1| phosphoglycerate transport reg... 352 3e-95
gi|16761323|ref|NP_456940.1| phosphoglycerate transport reg... 352 3e-95
gi|157083538|gb|ABV13216.1| hypothetical protein CKO_02091 ... 349 2e-94
gi|152970275|ref|YP_001335384.1| Phosphoglycerate transport... 345 3e-93
gi|77974319|ref|ZP_00829860.1| COG1840: ABC-type Fe3+ trans... 340 1e-91
gi|117625219|ref|YP_854266.1| phosphoglycerate transport re... 338 5e-91
gi|92110274|emb|CAJ87540.1| phosphoglycerate transport regu... 336 2e-90
gi|26251010|ref|NP_757050.1| Regulatory protein [Escherichi... 335 2e-90
gi|75241229|ref|ZP_00725091.1| COG1840: ABC-type Fe3+ trans... 332 3e-89
gi|7467277|pir||T11777 phosphoglycerate transport regulator... 323 2e-86
gi|75510874|ref|ZP_00733663.1| COG1840: ABC-type Fe3+ trans... 275 3e-72
gi|114048243|ref|YP_738793.1| putative phosphoglycerate tra... 176 3e-42
gi|113971018|ref|YP_734811.1| putative phosphoglycerate tra... 175 5e-42
gi|37676375|ref|NP_936771.1| ABC-type Fe3+ transport system... 173 2e-41
gi|28900680|ref|NP_800335.1| putative phosphoglycerate tran... 171 7e-41
gi|119776373|ref|YP_929113.1| phosphoglycerate transport re... 171 7e-41
gi|153836363|ref|ZP_01989030.1| ABC-type Fe3+ transport sys... 171 9e-41
gi|27366663|ref|NP_762190.1| ABC-type Fe3+ transport system... 170 2e-40
gi|54309923|ref|YP_130943.1| hypothetical phosphoglycerate ... 167 8e-40
gi|117620576|ref|YP_854556.1| ABC-type Fe3+ transport syste... 167 9e-40
gi|90412845|ref|ZP_01220845.1| hypothetical phosphoglycerat... 167 2e-39
gi|153829195|ref|ZP_01981862.1| putative phosphoglycerate t... 161 7e-38
gi|150421449|gb|EDN13730.1| putative phosphoglycerate trans... 160 1e-37
gi|116217557|ref|ZP_01483354.1| hypothetical protein VchoR_... 160 2e-37
gi|15601462|ref|NP_233093.1| phosphoglycerate transport reg... 159 3e-37
gi|153800897|ref|ZP_01955483.1| phosphoglycerate transport ... 159 3e-37
gi|125622284|gb|EAZ50605.1| phosphoglycerate transport regu... 159 3e-37
gi|153211917|ref|ZP_01947764.1| phosphoglycerate transport ... 159 3e-37
gi|121585550|ref|ZP_01675346.1| ABC-type Fe3+ transport sys... 159 4e-37
gi|153800735|ref|ZP_01955321.1| ABC-type Fe3+ transport sys... 159 4e-37
gi|116190399|ref|ZP_01480138.1| hypothetical protein VchoM_... 159 4e-37
gi|116220801|ref|ZP_01486223.1| hypothetical protein VchoV5... 159 4e-37
gi|90579342|ref|ZP_01235152.1| hypothetical phosphoglycerat... 144 2e-32
gi|89072725|ref|ZP_01159290.1| hypothetical phosphoglycerat... 138 8e-31
gi|69934917|ref|ZP_00629948.1| extracellular solute-binding... 134 1e-29
gi|118729411|ref|ZP_01577928.1| extracellular solute-bindin... 132 5e-29
gi|90406676|ref|ZP_01214869.1| phosphoglycerate transport r... 130 2e-28
gi|115422014|emb|CAJ48536.1| ABC transporter, substrate-bin... 129 3e-28
gi|33600439|ref|NP_887999.1| putative regulatory lipoprotei... 125 4e-27
gi|33596675|ref|NP_884318.1| putative regulatory lipoprotei... 125 4e-27
gi|33593269|ref|NP_880913.1| putative regulatory lipoprotei... 125 5e-27
gi|91776342|ref|YP_546098.1| putative regulatory lipoprotei... 122 4e-26
gi|69934920|ref|ZP_00629951.1| putative regulatory lipoprot... 119 4e-25
gi|67153593|ref|ZP_00415338.1| putative regulatory lipoprot... 119 4e-25
gi|119900124|ref|YP_935337.1| putative regulatory lipoprote... 115 5e-24
gi|116750914|ref|YP_847601.1| extracellular solute-binding ... 98 1e-18
gi|104781461|ref|YP_607959.1| ABC transporter, periplasmic ... 96 3e-18
gi|152982498|ref|YP_001355360.1| phosphoglycerate transport... 92 5e-17
gi|134096593|ref|YP_001101668.1| putative regulatory lipopr... 85 1e-14
gi|119720390|ref|YP_920885.1| extracellular solute-binding ... 84 2e-14
gi|145591389|ref|YP_001153391.1| extracellular solute-bindi... 82 7e-14
gi|14601589|ref|NP_148129.1| ABC transporter, substrate bin... 79 5e-13
gi|18311683|ref|NP_558350.1| extracellular solute binding p... 79 8e-13
gi|150400767|ref|YP_001324533.1| extracellular solute-bindi... 78 1e-12
gi|119871595|ref|YP_929602.1| extracellular solute-binding ... 76 3e-12
gi|134046596|ref|YP_001098081.1| extracellular solute-bindi... 70 2e-10
gi|45357671|ref|NP_987228.1| ABC-type Iron(III)-binding per... 70 3e-10
gi|150403030|ref|YP_001330324.1| extracellular solute-bindi... 69 4e-10
gi|126465064|ref|YP_001040173.1| extracellular solute-bindi... 68 9e-10
gi|126458873|ref|YP_001055151.1| extracellular solute-bindi... 67 2e-09
gi|83594529|ref|YP_428281.1| extracellular solute-binding p... 65 9e-09
gi|148379140|ref|YP_001253681.1| iron ABC transporter, solu... 63 5e-08
gi|153932369|ref|YP_001383515.1| ABC transporter, substrate... 63 5e-08
gi|117617747|ref|YP_856467.1| ABC transporter, periplasmic ... 62 6e-08
gi|84502540|ref|ZP_01000676.1| probable iron uptake ABC tra... 61 1e-07
gi|15603322|ref|NP_246396.1| hypothetical protein PM1457 [P... 61 1e-07
gi|124026969|ref|YP_001012289.1| ABC-type Fe3+ transport sy... 60 2e-07
gi|153941160|ref|YP_001390501.1| ABC transporter, substrate... 60 3e-07
gi|150384732|ref|ZP_01923405.1| ABC-type Fe3+ transport sys... 60 3e-07
gi|153010156|ref|YP_001371370.1| extracellular solute-bindi... 60 4e-07
gi|118592801|ref|ZP_01550190.1| ABC-type Fe3+ transport sys... 59 6e-07
gi|42525902|ref|NP_971000.1| ABC transporter, periplasmic s... 59 7e-07
gi|114567982|ref|YP_755136.1| ABC-type iron(III)-binding pe... 59 9e-07
gi|145953394|ref|ZP_01802402.1| hypothetical protein CdifQ_... 58 1e-06
gi|126700572|ref|YP_001089469.1| ABC transporter, substrate... 58 1e-06
gi|90418323|ref|ZP_01226235.1| periplasmic substrate-bindin... 58 2e-06
gi|30019829|ref|NP_831460.1| ABC transporter substrate-bind... 57 2e-06
gi|57640505|ref|YP_182983.1| ABC-type iron(III) transport s... 57 2e-06
gi|148322987|gb|EDK88237.1| iron (Fe3+) ABC superfamily ATP... 57 2e-06
gi|114567985|ref|YP_755139.1| ABC transporter, periplasmic ... 57 2e-06
gi|119871548|ref|YP_929555.1| hypothetical protein Pisl_002... 57 2e-06
gi|75759000|ref|ZP_00739109.1| ABC transporter substrate-bi... 57 3e-06
gi|19703717|ref|NP_603279.1| Iron(III)-binding protein [Fus... 55 7e-06
>gi|15603323|ref|NP_246397.1| PgtC [Pasteurella multocida subsp. multocida str. Pm70]
gi|12721839|gb|AAK03542.1| PgtC [Pasteurella multocida subsp. multocida str. Pm70]
Length = 411
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 222/387 (57%), Positives = 283/387 (73%), Gaps = 3/387 (0%)
Query: 28 SNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSS 87
+ ELVIGTTF+ E + +LI EW KQP++ I LNRTS SLN+L EK +DL+LSSS
Sbjct: 25 AEELVIGTTFALEGVQHLIKEWNKQPDSFPITTLNRTSASLNQLLSTEKAREVDLILSSS 84
Query: 88 PMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALLENAEVDVP 147
PMLFY+LQ K +LA LP +F+P++LQ TTVAF+LSG G+ N+ LL+ + P
Sbjct: 85 PMLFYNLQHKNKLAPLPPNIEHDTRFLPDLLQPTTVAFALSGYGMLFNIPLLQQTHLPFP 144
Query: 148 TDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISSRS 207
W L P+LQGLVI+SSP+RSDT HIM+EALLQ+ GWQQGW LI ++M NVGTISSRS
Sbjct: 145 QSWQDLTHPDLQGLVIISSPTRSDTNHIMVEALLQRYGWQQGWELIEKIMLNVGTISSRS 204
Query: 208 FGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNSTNS 267
FGVVDKVQA LGA GITIDNYA++LT + S L F YFP+FP+SPTFIA+ S
Sbjct: 205 FGVVDKVQANLGAVGITIDNYAHILTTQD---QSHLAFHYFPDFPISPTFIAVVAESRKK 261
Query: 268 RQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQLLLKRQ 327
+ A FI FLLS GQ L +M KYPI PL SHP A QQ LF+QP +DY LL+KRQ
Sbjct: 262 QHAFRFIRFLLSATGQQILTDPQMSKYPITPLPASHPQAALQQQLFAQPPLDYHLLIKRQ 321
Query: 328 EVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPITEKQATDENYLE 387
E+VKL+FE QI HRL+ ++E+W +L+QKE+ PLPELR+ILTALP++ +QA +++YL
Sbjct: 322 ELVKLLFEQQITHRLSLLKEHWHLLHQKERALNRPLPELRQILTALPVSAEQAENDDYLT 381
Query: 388 TFKANEALLHWQHFFMLQQMRFVDTVE 414
F ++ LL+WQHFF+ QQ+ FV+ +E
Sbjct: 382 HFNRSQELLNWQHFFIAQQLAFVNALE 408
>gi|152979377|ref|YP_001345006.1| phosphoglycerate transport regulatory protein [Actinobacillus
succinogenes 130Z]
gi|150841100|gb|ABR75071.1| phosphoglycerate transport regulatory protein [Actinobacillus
succinogenes 130Z]
Length = 415
Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats.
Identities = 224/400 (56%), Positives = 284/400 (71%), Gaps = 1/400 (0%)
Query: 17 VIALFCLGRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEK 76
+I C+ A+S+ELVI TT + E + +LI EW KQPN+ ++ LNRTS+S+ +LF E+
Sbjct: 16 LILTLCISTAHSSELVIATTLAREGVQHLIDEWHKQPNSAAVTTLNRTSDSIQQLFSTER 75
Query: 77 NDNIDLVLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNV 136
+DL+LSSSPMLF +LQ+K LA LP + + ++FVP +LQ +AFSLSG G+ N
Sbjct: 76 AKEVDLILSSSPMLFDNLQQKDGLAELPPELTFHQQFVPPMLQNKVLAFSLSGYGMLLNT 135
Query: 137 ALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQV 196
+L+ + +P W L LQGLVI+SSP+RSDT HIM+E +LQ+ GW QGWAL++Q+
Sbjct: 136 EVLDKQSIQIPRSWQDLTRSELQGLVIISSPTRSDTNHIMLETILQQFGWDQGWALLNQI 195
Query: 197 MANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPT 256
MANVGTISSRSFGVVDKVQAGLG GITIDNYANL T D S LIF+YF +F +SPT
Sbjct: 196 MANVGTISSRSFGVVDKVQAGLGGVGITIDNYANLFTAKR-DSQSPLIFRYFEHFTLSPT 254
Query: 257 FIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQP 316
FIA+ S+N QA AFI FLLS GQ+ L HSKMGK PI PL+ Y QQ LF QP
Sbjct: 255 FIALNKTSSNHSQAMAFIRFLLSQQGQTALNHSKMGKIPITPLSPESANYDIQQKLFKQP 314
Query: 317 TIDYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPIT 376
IDYQL+LKR +VKL+FE QI +RL Q+QENW++L QKE G LPELR+IL LP++
Sbjct: 315 QIDYQLMLKRDHLVKLLFEQQITYRLNQLQENWQLLRQKETALGKILPELRDILNQLPVS 374
Query: 377 EKQATDENYLETFKANEALLHWQHFFMLQQMRFVDTVEKL 416
+QA DE YL TF + LL WQ FF+ QQ+ F+ +EKL
Sbjct: 375 AEQAEDEQYLTTFNQKQRLLDWQAFFISQQLAFISALEKL 414
>gi|62180969|ref|YP_217386.1| Phosphoglycerate transport: protein for signal transmission
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|62128602|gb|AAX66305.1| Phosphoglycerate transport: protein for signal transmission
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
Length = 436
Score = 355 bits (911), Expect = 3e-96, Method: Composition-based stats.
Identities = 180/402 (44%), Positives = 264/402 (65%), Gaps = 9/402 (2%)
Query: 19 ALFCLGRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKND 78
A+F +AYS ELV+ TTFSP + +++I W+ +P + IR LNRTS SL +L D +
Sbjct: 39 AMFGSCQAYSRELVMATTFSPSATAWIIQRWQTEPGSVMIRTLNRTSGSLEQLLDTANAE 98
Query: 79 NIDLVLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVAL 138
N+DL+L+SSPML HLQE Q+LA L + +K VP ++ T+VA ++SG G+ N +
Sbjct: 99 NVDLILTSSPMLLQHLQEHQKLALLDSAPAASQKLVPRSIRSTSVAVAVSGFGLLINRSA 158
Query: 139 LENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMA 198
L + P DW + P+ QG ++MSSPSRSDT H+M+E+LLQ++GW GWA + +
Sbjct: 159 LAARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHLMVESLLQQKGWTAGWATLLAISG 218
Query: 199 NVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFI 258
N+ TISSRSFGV DK+++GLG AG IDNYANLL + DP+ L F YFP VSPT++
Sbjct: 219 NLVTISSRSFGVADKIKSGLGVAGPVIDNYANLLLN---DPN--LAFTYFPYSAVSPTYV 273
Query: 259 AITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTI 318
A+ NS ++ +A AFIH+LLS GQ L + GKYP+ PL+ +P A QQ L +QP +
Sbjct: 274 AVLKNSRHADEARAFIHYLLSPKGQRILADANTGKYPVAPLSADNPRAAQQQRLMAQPPL 333
Query: 319 DYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPITEK 378
+Y+L+LKRQ++V+ MF+ I RLAQ+++ W+ L+ E + PLPE+R +LT++P+
Sbjct: 334 NYRLILKRQQLVQRMFDTAISFRLAQLKDAWRALHSAETRLKRPLPEIRALLTSVPVDAA 393
Query: 379 QATDENYLETFK----ANEALLHWQHFFMLQQMRFVDTVEKL 416
+ DE +L F A + ++ WQ +F+ Q + +E+L
Sbjct: 394 SSEDETWLAQFDNKSFAEQKMMEWQIWFLNNQRLAIHKLEEL 435
>gi|56412704|ref|YP_149779.1| phosphoglycerate transport regulatory protein PgtC precursor
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|56126961|gb|AAV76467.1| phosphoglycerate transport regulatory protein PgtC precursor
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
Length = 397
Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats.
Identities = 179/401 (44%), Positives = 263/401 (65%), Gaps = 9/401 (2%)
Query: 20 LFCLGRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDN 79
+F +AYS ELV+ TTFSP + +++I W+ +P + IR LNRTS SL +L D +N
Sbjct: 1 MFGSCQAYSRELVMATTFSPSATAWIIQRWQTEPGSVMIRTLNRTSGSLEQLLDTANAEN 60
Query: 80 IDLVLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALL 139
+DL+L+SSPML HLQE Q+LA L + +K VP ++ T+VA ++SG G+ N + L
Sbjct: 61 VDLILTSSPMLLQHLQEHQKLALLDSAPAASQKLVPRSIRSTSVAVAVSGFGLLINRSAL 120
Query: 140 ENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMAN 199
+ P DW + P+ QG ++MSSPSRSDT H+M+E+LLQ++GW GWA + + N
Sbjct: 121 AARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHLMVESLLQQKGWTAGWATLLAISGN 180
Query: 200 VGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIA 259
+ TISSRSFGV DK+++GLG AG IDNYANLL + DP+ L F YFP VSPT++A
Sbjct: 181 LVTISSRSFGVADKIKSGLGVAGSVIDNYANLLLN---DPN--LAFTYFPYSAVSPTYVA 235
Query: 260 ITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTID 319
+ NS ++ +A AFIH+LLS GQ L + GKYP+ PL+ +P A QQ L +QP ++
Sbjct: 236 VLKNSRHADEARAFIHYLLSPKGQRILADANTGKYPVAPLSADNPRAAQQQRLMAQPPLN 295
Query: 320 YQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPITEKQ 379
Y+L+LKRQ++V+ MF+ I RLAQ+++ W+ L+ E + PLPE+R +LT++P+
Sbjct: 296 YRLILKRQQLVQRMFDTAISFRLAQLKDAWRALHSAETRLKRPLPEIRALLTSVPVDAAS 355
Query: 380 ATDENYLETFK----ANEALLHWQHFFMLQQMRFVDTVEKL 416
+ DE +L F A + ++ WQ +F+ Q + +E+L
Sbjct: 356 SEDETWLAQFDNKSFAEQKMMEWQIWFLNNQRLAIHKLEEL 396
>gi|16761323|ref|NP_456940.1| phosphoglycerate transport regulatory protein PgtC precursor
[Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|16765724|ref|NP_461339.1| phosphoglycerate transport regulatory protein precursor [Salmonella
typhimurium LT2]
gi|29140981|ref|NP_804323.1| phosphoglycerate transport regulatory protein PgtC precursor
[Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|61229885|sp|P0A233|PGTC_SALTY Phosphoglycerate transport regulatory protein pgtC precursor
gi|61229886|sp|P0A234|PGTC_SALTI Phosphoglycerate transport regulatory protein pgtC precursor
gi|25513384|pir||AI0806 phosphoglycerate transport regulatory protein PgtC precursor pgtC
[imported] - Salmonella enterica subsp. enterica serovar
Typhi (strain CT18)
gi|16420942|gb|AAL21298.1| protein for signal transmission [Salmonella typhimurium LT2]
gi|16503622|emb|CAD07635.1| phosphoglycerate transport regulatory protein PgtC precursor
[Salmonella enterica subsp. enterica serovar Typhi]
gi|29136606|gb|AAO68172.1| phosphoglycerate transport regulatory protein PgtC precursor
[Salmonella enterica subsp. enterica serovar Typhi Ty2]
Length = 397
Score = 352 bits (902), Expect = 3e-95, Method: Composition-based stats.
Identities = 179/401 (44%), Positives = 263/401 (65%), Gaps = 9/401 (2%)
Query: 20 LFCLGRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDN 79
+F +AYS ELV+ TTFSP + +++I W+ +P + IR LNRTS SL +L D +N
Sbjct: 1 MFGSCQAYSRELVMATTFSPSATAWIIQRWQTEPGSVMIRTLNRTSGSLEQLLDTANAEN 60
Query: 80 IDLVLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALL 139
+DL+L+SSPML HLQE Q+LA L + +K VP ++ T+VA ++SG G+ N + L
Sbjct: 61 VDLILTSSPMLLQHLQEHQKLALLDSAPAASQKLVPRSIRSTSVAVAVSGFGLLINRSAL 120
Query: 140 ENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMAN 199
+ P DW + P+ QG ++MSSPSRSDT H+M+E+LLQ++GW GWA + + N
Sbjct: 121 AARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHLMVESLLQQKGWTAGWATLLAISGN 180
Query: 200 VGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIA 259
+ TISSRSFGV DK+++GLG AG IDNYANLL + DP+ L F YFP VSPT++A
Sbjct: 181 LVTISSRSFGVADKIKSGLGVAGPVIDNYANLLLN---DPN--LAFTYFPYSAVSPTYVA 235
Query: 260 ITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTID 319
+ NS ++ +A AFIH+LLS GQ L + GKYP+ PL+ +P A QQ L +QP ++
Sbjct: 236 VLKNSRHADEARAFIHYLLSPKGQRILADANTGKYPVAPLSADNPRAAQQQRLMAQPPLN 295
Query: 320 YQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPITEKQ 379
Y+L+LKRQ++V+ MF+ I RLAQ+++ W+ L+ E + PLPE+R +LT++P+
Sbjct: 296 YRLILKRQQLVQRMFDTAISFRLAQLKDAWRALHSAETRLKRPLPEIRALLTSVPVDAAS 355
Query: 380 ATDENYLETFK----ANEALLHWQHFFMLQQMRFVDTVEKL 416
+ DE +L F A + ++ WQ +F+ Q + +E+L
Sbjct: 356 SEDETWLAQFDNKSFAEQKMMEWQIWFLNNQRLAIHKLEEL 396
>gi|157083538|gb|ABV13216.1| hypothetical protein CKO_02091 [Citrobacter koseri ATCC BAA-895]
Length = 423
Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats.
Identities = 179/395 (45%), Positives = 254/395 (64%), Gaps = 9/395 (2%)
Query: 26 AYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLS 85
A SNELV+ TTFSP + +++I W+ +P + IR LNRTS SL +L D +N+DL+L+
Sbjct: 33 AQSNELVMATTFSPSATAWIIQRWQTEPGSVMIRTLNRTSASLEQLLDTANAENVDLILT 92
Query: 86 SSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALLENAEVD 145
SSPML HLQE Q+LA S + VPE ++ T+VA ++SG G+ N + L +
Sbjct: 93 SSPMLLQHLQEHQKLAPFNGAPSVSQHLVPESIRSTSVAVAISGFGLLINRSALTARHLP 152
Query: 146 VPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISS 205
PT W L P QG ++MSSPSRSDT H+M+EALLQ++GW QGW + N+ TISS
Sbjct: 153 SPTGWDDLTDPRYQGALLMSSPSRSDTNHLMVEALLQQKGWAQGWETLLASAGNLVTISS 212
Query: 206 RSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNST 265
RSFGV DK+++GLG AG IDNYANLL + DPH L F YFP VSPT++A+ NS
Sbjct: 213 RSFGVADKIKSGLGVAGPVIDNYANLLLN---DPH--LAFTYFPQSAVSPTYVAVLKNSQ 267
Query: 266 NSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQLLLK 325
++ +A FI +LLS GQ L + GKYP+ PLA +P A Q L +QP ++Y+L+LK
Sbjct: 268 HASEARRFIRYLLSPEGQRILADANTGKYPVTPLAAGNPRAAQQAVLMNQPPLNYRLILK 327
Query: 326 RQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPITEKQATDENY 385
RQ +V+ MF+ I RLAQ+++ W+ L+ E + PLPE+R +LT +P+ + DE +
Sbjct: 328 RQRLVQRMFDTAISFRLAQLKDAWRALHSAEARLKRPLPEIRALLTRVPVDPASSEDEAW 387
Query: 386 LETFK----ANEALLHWQHFFMLQQMRFVDTVEKL 416
L F A + ++ WQ +F+ Q + ++ +E+L
Sbjct: 388 LAQFDNKSFAEQQMMEWQIWFLNNQRQAINKLEEL 422
>gi|152970275|ref|YP_001335384.1| Phosphoglycerate transport: protein for signal transmission
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|150955124|gb|ABR77154.1| Phosphoglycerate transport: protein for signal transmission
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
Length = 409
Score = 345 bits (886), Expect = 3e-93, Method: Composition-based stats.
Identities = 176/395 (44%), Positives = 253/395 (64%), Gaps = 9/395 (2%)
Query: 26 AYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLS 85
A NELV+ TTFSP + ++I W+K+P + IR LNRTS SL +L D +N+DL+L+
Sbjct: 19 AQGNELVMATTFSPSATVWIIDRWQKEPGSVMIRTLNRTSASLEQLLDTANAENVDLILT 78
Query: 86 SSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALLENAEVD 145
SSPML HLQE Q+LA + + VPE ++ T+VA ++SG G+ N + L +
Sbjct: 79 SSPMLLQHLQEHQKLAPFSGAPAVSQHLVPESIRSTSVAVAISGFGLLMNRSALMTRHLP 138
Query: 146 VPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISS 205
P DW L P QG ++MSSPSRSDT H+M+E+LLQ++GW +GW + N+ TISS
Sbjct: 139 APADWDDLTDPRYQGALLMSSPSRSDTNHLMVESLLQQKGWIKGWETLLTTAGNLVTISS 198
Query: 206 RSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNST 265
RSFGV DK+++GLG AG IDNYANLL + DPH L F YFP VSPT++A+ NS
Sbjct: 199 RSFGVADKIKSGLGVAGPVIDNYANLLLN---DPH--LAFTYFPQSAVSPTYVAVLKNSQ 253
Query: 266 NSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQLLLK 325
++ +A FI +LLS GQ+ L + GKYP+ PLA +P A Q L +QP ++Y+L+LK
Sbjct: 254 HASEARRFIRYLLSPEGQTILADANTGKYPVTPLAPGNPRAAQQAMLMNQPPLNYRLILK 313
Query: 326 RQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPITEKQATDENY 385
RQ +V+ MF+ I RLAQ+++ W+ L+ E + PLPE+R +LT +P+ + DE +
Sbjct: 314 RQRLVQRMFDTAISFRLAQLKDAWRALHSAEVRLKRPLPEIRALLTRVPVDPASSEDEAW 373
Query: 386 LETFK----ANEALLHWQHFFMLQQMRFVDTVEKL 416
L F A + ++ WQ +F+ Q + + +E+L
Sbjct: 374 LAQFDNKSFAEQQMMEWQLWFLNNQRQAITKLEEL 408
>gi|77974319|ref|ZP_00829860.1| COG1840: ABC-type Fe3+ transport system, periplasmic component
[Yersinia frederiksenii ATCC 33641]
Length = 416
Score = 340 bits (871), Expect = 1e-91, Method: Composition-based stats.
Identities = 182/365 (49%), Positives = 249/365 (68%), Gaps = 6/365 (1%)
Query: 26 AYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLS 85
+ +NELVI TTFSPE+ +++I++W+KQP + ++R LNRTS+SL +L D ++IDL+L+
Sbjct: 21 SMANELVIATTFSPEATAHIISQWQKQPQSIAVRTLNRTSSSLERLLDTPMGESIDLILT 80
Query: 86 SSPMLFYHLQEKQRLAALPDKFSQGKK-FVPEILQKTTVAFSLSGCGIFSNVALLENAEV 144
SSPML HLQ+ Q+L LP Q ++ VPE ++ +TVA ++SG GI +N A L+ +
Sbjct: 81 SSPMLMQHLQDHQQLNPLPPLPRQNQQQLVPESIRNSTVAVAISGYGILANSARLKEKHL 140
Query: 145 DVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTIS 204
PT W GL QG+++MSSPSRSDT H+MIE LLQ++GW+QGWA + +V N+ TIS
Sbjct: 141 PTPTTWEGLKDARYQGMILMSSPSRSDTNHLMIETLLQERGWEQGWATLLEVSGNLATIS 200
Query: 205 SRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNS 264
SRSFGV +K++ GLG AG IDNYA LL DP L F YFP SPTFIAIT NS
Sbjct: 201 SRSFGVSNKIKTGLGVAGPIIDNYATLLLK---DPQ--LTFSYFPQSGASPTFIAITKNS 255
Query: 265 TNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQLLL 324
+ A+ FIHFLLSD GQ L + GKYP+ PL +S P QQ L Q +DY+ +L
Sbjct: 256 AHQSDATRFIHFLLSDIGQQALSDTATGKYPVTPLPESDPRAKQQQRLLQQTPLDYRQIL 315
Query: 325 KRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPITEKQATDEN 384
RQ++V+ +F+ I RL Q+Q+ WK L+ E + PLPE+R +LTA+P++++QATD
Sbjct: 316 LRQQLVQQLFDTAISFRLHQLQDAWKALHNAETRLKRPLPEIRALLTAIPVSDRQATDTR 375
Query: 385 YLETF 389
YL F
Sbjct: 376 YLSLF 380
>gi|117625219|ref|YP_854266.1| phosphoglycerate transport regulatory protein [Escherichia coli
APEC O1]
gi|70608363|gb|AAZ04435.1| phosphoglycerate transport regulatory protein [Escherichia coli]
gi|115514343|gb|ABJ02418.1| phosphoglycerate transport regulatory protein [Escherichia coli
APEC O1]
Length = 423
Score = 338 bits (866), Expect = 5e-91, Method: Composition-based stats.
Identities = 173/396 (43%), Positives = 249/396 (62%), Gaps = 9/396 (2%)
Query: 25 RAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVL 84
RA NELV+ TTFSP +++++I W+ +P + IR LNRTS SL +L D +N+DL+L
Sbjct: 32 RAQRNELVMATTFSPGAIAWIIQRWQTEPESVMIRTLNRTSASLEQLLDTANVENVDLIL 91
Query: 85 SSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALLENAEV 144
+SSPML HLQE Q+LA D ++ + VPE ++ T+VA ++SG G+ N L +
Sbjct: 92 TSSPMLLQHLQEHQKLAPFDDAPAESQNLVPESIRATSVAVAISGFGLLINRPALSVKHL 151
Query: 145 DVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTIS 204
P DW L P Q ++MSSPSRSDT H+M+E+LLQ++GW +GW + N+ TIS
Sbjct: 152 PAPADWDDLALPIYQDALLMSSPSRSDTNHLMVESLLQQKGWVKGWETLLTSAGNLVTIS 211
Query: 205 SRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNS 264
SRSFGV DK+++GLG AG IDNYANLL + DPH + F YFP VSPT++AI S
Sbjct: 212 SRSFGVADKIKSGLGVAGPVIDNYANLLLN---DPH--ISFTYFPRSAVSPTYVAILRKS 266
Query: 265 TNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQLLL 324
++ A FIH+LLS GQ L + GKYP+ PLA +P QQ L +QP ++Y L+L
Sbjct: 267 PHADAARRFIHYLLSPKGQRILADANTGKYPVTPLAADNPRATQQQLLMNQPPLNYHLIL 326
Query: 325 KRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPITEKQATDEN 384
KRQ +V+ +F+ I R AQ+++ W+ L+ E + PLPE+R +LT +P+ + D
Sbjct: 327 KRQRLVQRLFDTAISFRFAQLKDAWRALHSTEARLKKPLPEIRALLTQMPVAAASSEDPV 386
Query: 385 YLETFK----ANEALLHWQHFFMLQQMRFVDTVEKL 416
+L F A + ++ WQ +F+ Q + +E+L
Sbjct: 387 WLAQFDNKSFAEQQMMEWQLWFLNNQRLAIKKLEEL 422
>gi|92110274|emb|CAJ87540.1| phosphoglycerate transport regulatory protein [Escherichia coli]
Length = 423
Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats.
Identities = 173/396 (43%), Positives = 248/396 (62%), Gaps = 9/396 (2%)
Query: 25 RAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVL 84
RA NELV+ TTFSP + +++I W+ +P + +R LNRTS SL +L D +N+DL+L
Sbjct: 32 RAQRNELVMATTFSPGATAWIIQRWQTEPESVMVRTLNRTSASLEQLLDTANVENVDLIL 91
Query: 85 SSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALLENAEV 144
+SSPML HLQE Q+LA D ++ + VPE ++ T+VA ++SG G+ N L +
Sbjct: 92 TSSPMLLQHLQEHQKLAPFDDAPAESQNLVPESIRATSVAVAISGFGLLINRPALSVKHL 151
Query: 145 DVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTIS 204
P DW L P Q ++MSSPSRSDT H+M+E+LLQ++GW +GW + N+ TIS
Sbjct: 152 PAPADWDDLALPIYQDALLMSSPSRSDTNHLMVESLLQQKGWVKGWETLLTSAGNLVTIS 211
Query: 205 SRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNS 264
SRSFGV DK+++GLG AG IDNYANLL + DPH L F YFP VSPT++AI S
Sbjct: 212 SRSFGVADKIKSGLGVAGPVIDNYANLLLN---DPH--LSFTYFPRSAVSPTYVAILRKS 266
Query: 265 TNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQLLL 324
++ A FIH+LLS GQ L + GKYP+ PLA +P QQ L +QP ++Y L+L
Sbjct: 267 PHADAARRFIHYLLSPKGQRILADANTGKYPVTPLAADNPRATQQQLLMNQPPLNYHLIL 326
Query: 325 KRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPITEKQATDEN 384
KRQ +V+ +F+ I RLAQ+++ W+ L+ E + PLPE+R +L +P+ + D
Sbjct: 327 KRQRLVQRLFDTAISFRLAQLKDAWRALHSTEARLKKPLPEIRALLAQVPVAAASSEDPF 386
Query: 385 YLETFK----ANEALLHWQHFFMLQQMRFVDTVEKL 416
+L F A + ++ WQ +F+ Q + +E+L
Sbjct: 387 WLAQFDNKSFAEQQMMEWQLWFLNNQRLAIKKLEEL 422
>gi|26251010|ref|NP_757050.1| Regulatory protein [Escherichia coli CFT073]
gi|26111442|gb|AAN83624.1|AE016771_135 Regulatory protein [Escherichia coli CFT073]
Length = 435
Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats.
Identities = 172/396 (43%), Positives = 248/396 (62%), Gaps = 9/396 (2%)
Query: 25 RAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVL 84
RA NELV+ TTFSP +++++I W+ +P + IR LNRTS SL +L D +N+DL+L
Sbjct: 44 RAQRNELVMATTFSPGAIAWIIQRWQTEPESVMIRTLNRTSASLEQLLDTANVENVDLIL 103
Query: 85 SSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALLENAEV 144
+SSPML HLQE Q+LA D ++ + VPE ++ T+VA ++SG G+ N L +
Sbjct: 104 TSSPMLLQHLQEHQKLAPFDDAPAESQNLVPESIRATSVAVAISGFGLLINRPALSVKHL 163
Query: 145 DVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTIS 204
P DW L P Q ++MSSPSRSDT H+M+E+LLQ++GW +GW + N+ TIS
Sbjct: 164 PAPADWDDLALPIYQDALLMSSPSRSDTNHLMVESLLQQKGWVKGWETLLTSAGNLVTIS 223
Query: 205 SRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNS 264
SRSFGV DK+++GLG AG IDNYANLL + DPH + F YFP VSPT++AI S
Sbjct: 224 SRSFGVADKIKSGLGVAGPVIDNYANLLLN---DPH--ISFTYFPRSAVSPTYVAILRKS 278
Query: 265 TNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQLLL 324
++ A FIH+LLS GQ L + GKYP+ LA +P QQ L +QP ++Y L+L
Sbjct: 279 PHADAARRFIHYLLSPKGQRILADANTGKYPVTSLAADNPRATQQQLLMNQPPLNYHLIL 338
Query: 325 KRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPITEKQATDEN 384
KRQ +V+ +F+ I R AQ+++ W+ L+ E + PLPE+R +LT +P+ + D
Sbjct: 339 KRQRLVQRLFDTAISFRFAQLKDAWRALHSTEARLKKPLPEIRALLTQMPVAAASSEDPV 398
Query: 385 YLETFK----ANEALLHWQHFFMLQQMRFVDTVEKL 416
+L F A + ++ WQ +F+ Q + +E+L
Sbjct: 399 WLAQFDNKSFAEQQMMEWQLWFLNNQRLAIKKLEEL 434
>gi|75241229|ref|ZP_00725091.1| COG1840: ABC-type Fe3+ transport system, periplasmic component
[Escherichia coli F11]
gi|110643131|ref|YP_670861.1| regulatory protein [Escherichia coli 536]
gi|47154968|emb|CAE85167.1| PgtC protein [Escherichia coli]
gi|110344723|gb|ABG70960.1| regulatory protein [Escherichia coli 536]
Length = 423
Score = 332 bits (850), Expect = 3e-89, Method: Composition-based stats.
Identities = 173/396 (43%), Positives = 247/396 (62%), Gaps = 9/396 (2%)
Query: 25 RAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVL 84
RA NELV+ TTFSP + +++I W+ +P + IR LNRTS SL +L +N+DL+L
Sbjct: 32 RAQRNELVMATTFSPGATAWIIQRWQTEPESVMIRTLNRTSASLEQLLYTANVENVDLIL 91
Query: 85 SSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALLENAEV 144
+SSPML HLQE Q+LA D ++ + VPE ++ T+VA ++SG G+ N L +
Sbjct: 92 TSSPMLLQHLQEHQKLAPFDDAPAESQNLVPESIRATSVAVAISGFGLLINRPALSVKHL 151
Query: 145 DVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTIS 204
P DW L P Q ++MSSPSRSDT H+M+E+LLQ++GW +GW + N+ TIS
Sbjct: 152 PAPADWDDLALPIYQDALLMSSPSRSDTNHLMVESLLQQKGWVKGWETLLTSAGNLVTIS 211
Query: 205 SRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNS 264
SRSFGV DK+++GLG AG IDNYANLL + DPH L F YFP VSPT++AI S
Sbjct: 212 SRSFGVADKIKSGLGVAGPVIDNYANLLLN---DPH--LSFTYFPRSAVSPTYVAILKKS 266
Query: 265 TNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQLLL 324
++ A FIH+LLS GQ L + GKYP+ PLA +P QQ L +QP ++Y L+L
Sbjct: 267 PHADAARRFIHYLLSPKGQRILADANTGKYPVTPLAADNPRATQQQLLMNQPPLNYHLIL 326
Query: 325 KRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPITEKQATDEN 384
KRQ +V+ +F+ I RLAQ+++ W+ L+ E + PLPE+R +LT +P+ + D
Sbjct: 327 KRQSLVQRLFDTAISFRLAQLKDAWRALHSTEARLKKPLPEIRALLTQVPVAAASSEDPV 386
Query: 385 YLETFK----ANEALLHWQHFFMLQQMRFVDTVEKL 416
+L F + ++ WQ +F+ Q + +E+L
Sbjct: 387 WLAQFDNKSFTEQQMMKWQLWFLNNQRLAIKKLEEL 422
>gi|7467277|pir||T11777 phosphoglycerate transport regulatory protein pgtC - Salmonella
typhimurium
gi|154258|gb|AAA68214.1| regulatory protein pgtC
Length = 397
Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats.
Identities = 172/405 (42%), Positives = 259/405 (63%), Gaps = 17/405 (4%)
Query: 20 LFCLGRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDN 79
+F +AYS ELV+ TTFSP + +++I W+ +P + IR LNR+S SL +L D +N
Sbjct: 1 MFGSCQAYSRELVMATTFSPSATAWIIQRWQTEPGSVMIRTLNRSSGSLEQLLDTANAEN 60
Query: 80 IDLVLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALL 139
+DL+L+SSPML HLQE Q+LA L + +K VP ++ T+VA ++SG G+ N + L
Sbjct: 61 VDLILTSSPMLLQHLQEHQKLALLDSAPAASQKLVPRSIRSTSVAVAVSGFGLLINRSAL 120
Query: 140 ENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMAN 199
+ P DW + P+ QG ++MSSPSRSDT H+M+E+LLQ++GW GWA + + N
Sbjct: 121 AARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHLMVESLLQQKGWTAGWATLLAISGN 180
Query: 200 VGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIA 259
+ TISSRSFGV DK+++GLG AG IDNYANLL + DP+ L F YFP VSPT++A
Sbjct: 181 LVTISSRSFGVADKIKSGLGVAGPVIDNYANLLLN---DPN--LAFTYFPYSAVSPTYVA 235
Query: 260 ITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPI-IPLAKSHPLYAT---QQFLFSQ 315
+ NS ++ +A AFIH+LLS G+ + + P+ IP + P+ QQ L +Q
Sbjct: 236 VLKNSRHADEARAFIHYLLSPKGKGYW----LTRIPVSIPSHRLAPIILAPRQQQRLMAQ 291
Query: 316 PTIDYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPI 375
P ++Y+L+LKRQ++V+ MF+ I RLAQ+++ W+ L+ E + PLPE+R +LT++P+
Sbjct: 292 PPLNYRLILKRQQLVQRMFDTAISFRLAQLKDAWRALHSAETRLKRPLPEIRALLTSVPV 351
Query: 376 TEKQATDENYLETFK----ANEALLHWQHFFMLQQMRFVDTVEKL 416
+ DE +L F A + ++ WQ +F+ Q + +E+L
Sbjct: 352 DAASSEDETWLAQFDNKSFAEQKMMEWQIWFLNNQRLAIHKLEEL 396
>gi|75510874|ref|ZP_00733663.1| COG1840: ABC-type Fe3+ transport system, periplasmic component
[Escherichia coli 53638]
Length = 335
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 145/339 (42%), Positives = 210/339 (61%), Gaps = 9/339 (2%)
Query: 82 LVLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALLEN 141
++L+SSPML +LQE Q+LA D ++ + VPE ++ T+VA ++SG G+ N L
Sbjct: 1 MILTSSPMLLQYLQEHQKLAPFDDAPAESQNLVPESIRTTSVAVAISGFGLLINRPALSV 60
Query: 142 AEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVG 201
+ P DW L P Q ++MSSPSRSDT H+M+E+LLQ++GW +GW + N+
Sbjct: 61 KHLPAPADWDDLALPIYQDALLMSSPSRSDTNHLMVESLLQQKGWVKGWETLLTSAGNLV 120
Query: 202 TISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAIT 261
TISSRSFGV DK+++GLG AG IDNYANLL + DPH L F YFP VSPT++AI
Sbjct: 121 TISSRSFGVADKIKSGLGVAGPVIDNYANLLLN---DPH--LSFTYFPRSAVSPTYVAIL 175
Query: 262 TNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQ 321
S ++ A FIH+LLS GQ L + GKYP+ PLA +P QQ L +QP ++Y
Sbjct: 176 RKSPHADAARRFIHYLLSPKGQRILADANTGKYPVTPLAADNPRATQQQLLMNQPPLNYH 235
Query: 322 LLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPITEKQAT 381
L+LKRQ +V+ +F+ I RLAQ+++ W+ L+ E + PLPE+R +LT +P+ +
Sbjct: 236 LILKRQRLVQRLFDTAISFRLAQLKDAWRALHSTEARLKKPLPEIRALLTQVPVAAASSE 295
Query: 382 DENYLETFK----ANEALLHWQHFFMLQQMRFVDTVEKL 416
+L F A + ++ WQ +F+ Q + +E+L
Sbjct: 296 APVWLAQFDNKSFAEQQMMEWQLWFLNNQRLAIKKLEEL 334
>gi|114048243|ref|YP_738793.1| putative phosphoglycerate transport regulatory protein PgtC
[Shewanella sp. MR-7]
gi|113889685|gb|ABI43736.1| putative phosphoglycerate transport regulatory protein PgtC
[Shewanella sp. MR-7]
Length = 437
Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 109/387 (28%), Positives = 195/387 (50%), Gaps = 25/387 (6%)
Query: 31 LVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSSPML 90
+V+ TTFS E + L E+++ I+++ R + K + +D+++SSSP
Sbjct: 45 IVVLTTFSEEPMGALFEEFKQLNPDIPIQVVYRRTGPALKWVKQSSINPVDMIISSSPTF 104
Query: 91 FYHLQEKQRLAALPDKFSQGKKFVPEILQKT--TVAFSLSGCGIFSNVALLENAEVDVPT 148
F+ L + + A +++ + L K+ T+A SG I N LE + +P
Sbjct: 105 FHDLDNEGLIVAPSERYEMPAWLMVHDLTKSNKTIALGYSGITIMYNQRYLEKNNLPIPH 164
Query: 149 DWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISSRSF 208
W L + G ++MS+P+ S TTH+M+E +LQ++GW+QGWAL+ +V N+ ++S+RSF
Sbjct: 165 TWKDLATAQFSGHIMMSTPNNSGTTHMMVEGVLQQKGWEQGWALLREVGGNLASVSARSF 224
Query: 209 GVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNSTNSR 268
GV + + GL AG+ ID+YA + N P + F Y PN + PT+I++T N
Sbjct: 225 GVSESISRGLVGAGVVIDSYA--IDAKNKFPFTD--FNYLPNTVILPTYISVTPRGRNKT 280
Query: 269 QASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQLLLKRQE 328
I + LS GQ + + K H L SQP I+ +L R
Sbjct: 281 NVEKLIQYFLSSNGQKLISSGAIAK---------HSLTDASLAQNSQPVINEHILFNRAT 331
Query: 329 VVKLMFEHQIIHRLAQIQENWKILYQKE------QQAGHPLPELREILTALPITEKQATD 382
++ +F+ I ++L ++Q WK+++Q E + + E R++ + +PI+E ++
Sbjct: 332 IINALFDQVITYQLPKLQLAWKLIHQAEDANNIQEDERKIINEARKLASLVPISEAESLQ 391
Query: 383 ENYLETFKANEALLHWQHFFMLQQMRF 409
+ + NE ++H ++Q+ +
Sbjct: 392 LQHQFIRQTNE----YKHSTEIEQIMY 414
>gi|113971018|ref|YP_734811.1| putative phosphoglycerate transport regulatory protein PgtC
[Shewanella sp. MR-4]
gi|113885702|gb|ABI39754.1| putative phosphoglycerate transport regulatory protein PgtC
[Shewanella sp. MR-4]
Length = 437
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 107/390 (27%), Positives = 195/390 (50%), Gaps = 31/390 (7%)
Query: 31 LVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSSPML 90
+V+ TTFS E + L E+++ I+++ R + K + +D+++SSSP
Sbjct: 45 IVVLTTFSEEPMGALFEEFKQLNPDIPIQVVYRRTGPALKWVKQSSINPVDMIISSSPTF 104
Query: 91 FYHLQEKQRLAALPDKFSQGKKFVPEILQKT--TVAFSLSGCGIFSNVALLENAEVDVPT 148
F+ L + + A +++ + L K+ T+A SG I N LE + +P
Sbjct: 105 FHDLDNEGLIVAPSERYEMPAWLMVHDLTKSNKTIALGYSGITIMYNQRYLEKNNLPIPH 164
Query: 149 DWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISSRSF 208
W L + G ++MS+P+ S TTH+M+E +LQ++GW+QGWAL+ +V N+ ++S+RSF
Sbjct: 165 TWKDLATAQFSGHIMMSTPNNSGTTHMMVEGVLQQKGWEQGWALLREVGGNLASVSARSF 224
Query: 209 GVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIF---KYFPNFPVSPTFIAITTNST 265
GV + + GL AG+ ID+YA +D + F Y PN + PT+I++T+
Sbjct: 225 GVSESISRGLVGAGVVIDSYA-------IDAKNKFTFTDYNYLPNTVILPTYISVTSRGR 277
Query: 266 NSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQLLLK 325
N I + LS GQ + + K H L S+P I+ +L
Sbjct: 278 NKTNVEKLIQYFLSSNGQKLISSGAIAK---------HSLTDASLAQNSRPVINEHILFN 328
Query: 326 RQEVVKLMFEHQIIHRLAQIQENWKILYQKE------QQAGHPLPELREILTALPITEKQ 379
R ++ +F+ I ++L ++Q WK+++Q E + + E R++ + +PI+E +
Sbjct: 329 RATIINALFDQVITYQLPKLQLAWKLIHQAEDANNIQEDERKTINEARKLASLVPISEAE 388
Query: 380 ATDENYLETFKANEALLHWQHFFMLQQMRF 409
+ + + NE ++H ++Q+ +
Sbjct: 389 SLQLQHQFIRQTNE----YKHSTEIEQIMY 414
>gi|37676375|ref|NP_936771.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio
vulnificus YJ016]
gi|37200917|dbj|BAC96741.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio
vulnificus YJ016]
Length = 433
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 117/377 (31%), Positives = 197/377 (52%), Gaps = 24/377 (6%)
Query: 17 VIALFCLGRAYSN---ELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFD 73
+ +L C G + ++ E+V+ TTFS E LS LI E++ + +R ++R S S +L
Sbjct: 16 LFSLVCFGASAASTDKEIVVLTTFSQEPLSILIDEFKLRHPDAEVRFIHRRSESSIQLLG 75
Query: 74 DEKNDNIDLVLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEIL--QKTTVAFSLSGCG 131
+IDLVLSSSP L L E +RL + + P +L Q+ + SG G
Sbjct: 76 KTYMQDIDLVLSSSPFLMQKLSESERLGDVAQHETLPSWMSPYVLPPQQQVLTIGYSGAG 135
Query: 132 IFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWA 191
I N L+ ++++P + L G + MS+PSRS TT +M+E++L + GWQ GW
Sbjct: 136 IVWNRDYLQAHQLNIPERFIDLTRSQYFGHITMSTPSRSGTTQMMVESILSRYGWQDGWR 195
Query: 192 LIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNF 251
++ + AN+ TISSRSFGV D + G G TID+YA LL D H F+ +F
Sbjct: 196 ILINIGANLATISSRSFGVSDYIAKGQFGLGPTIDSYA-LLIQRKFD-HVGFAFE--SDF 251
Query: 252 PVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQF 311
+ PT+IA T ++ F+ LLSDP Q++L + K+ L+ T++
Sbjct: 252 TLMPTYIAKTQRASADPLVDDFMAMLLSDPMQASLGKNSFAKF---------SLHDTERK 302
Query: 312 LFSQPTIDYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQ-KEQQAGHP-----LPE 365
P ++ +++R+ + +F+ I RL ++++ W+ + Q ++ A +P L
Sbjct: 303 DGDHPALNISAIMQREVLTNRLFDLAITKRLPELKDTWQTIIQLRKAYADNPAVLTQLES 362
Query: 366 LREILTALPITEKQATD 382
+R++ +P++E + +
Sbjct: 363 IRQLAFDIPVSEAEVLE 379
>gi|28900680|ref|NP_800335.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio
parahaemolyticus RIMD 2210633]
gi|28809060|dbj|BAC62168.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio
parahaemolyticus RIMD 2210633]
Length = 432
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 121/368 (32%), Positives = 184/368 (50%), Gaps = 21/368 (5%)
Query: 23 LGRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDL 82
L A ELVI TTFS ++ L+ ++ + +R+++R + S +L +IDL
Sbjct: 25 LTMAAEKELVILTTFSQAPITALVDDFTQHYPDAEVRVVHRRTQSSLQLLSKSYMKDIDL 84
Query: 83 VLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEIL--QKTTVAFSLSGCGIFSNVALLE 140
VLSSSP L L + RLA + + K P +L VAF SG GI N L
Sbjct: 85 VLSSSPFLMQELSNEHRLADMSSRVQVPKWLSPYLLPNNDQVVAFGYSGAGIVWNKDYLA 144
Query: 141 NAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANV 200
+ P + L +P G V MS+PSRS TT +M+E++L + GWQ+GW ++ V AN+
Sbjct: 145 ANHLPEPKRFQDLTNPLYFGHVTMSTPSRSGTTQLMVESVLSQYGWQEGWRILLNVGANL 204
Query: 201 GTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAI 260
TISSRSFGV D + G G TID+YA L+ D + F Y +F + PT+IA
Sbjct: 205 ATISSRSFGVADYIAKGKFGIGPTIDSYA-LIAQRKFD---YVGFAYDQDFTLMPTYIAQ 260
Query: 261 TTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDY 320
+ + A +FI LLS Q + S K L T ++ P +D
Sbjct: 261 INRGKSDKLAESFIAHLLSKEVQEQMESSTFSKT---------ALDDTARYGGENPVLDL 311
Query: 321 QLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAG------HPLPELREILTALP 374
+ ++ R+ ++ L+F+ I RL ++Q+ W L + + A L + + L LP
Sbjct: 312 EQVMPREALINLIFDTAITKRLPELQDAWLSLIKLNRLADGKAEKQRSLQAIEKQLFELP 371
Query: 375 ITEKQATD 382
+++ QAT+
Sbjct: 372 LSKAQATE 379
>gi|119776373|ref|YP_929113.1| phosphoglycerate transport regulatory protein PgtC, putative
[Shewanella amazonensis SB2B]
gi|119768873|gb|ABM01444.1| phosphoglycerate transport regulatory protein PgtC, putative
[Shewanella amazonensis SB2B]
Length = 419
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 122/385 (31%), Positives = 191/385 (49%), Gaps = 36/385 (9%)
Query: 24 GRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLV 83
G+A N LVI T+FS L+ ++ + +R++ R + +L DE IDLV
Sbjct: 21 GQAKENCLVILTSFSELPFKGLVDKFSAKEQC-EVRVIYRRTLPAIRLLTDENQPRIDLV 79
Query: 84 LSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFS-------LSGCGIFSNV 136
+SSSP LF L ++ LA L + + P L++ ++ S SG G+ N
Sbjct: 80 VSSSPTLFQTLHQQHLLAPLGELPA-----APAWLKRHSLPASDYVLPVAYSGIGLMFNR 134
Query: 137 ALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQV 196
L + P W L P G V+MSSPS S TTH+M+E +LQ +GW GW L+ ++
Sbjct: 135 DYLNKHGLPQPRSWQDLAQPGFNGHVMMSSPSHSGTTHMMVENILQSEGWDAGWGLLMRI 194
Query: 197 MANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLL-THYNVDPHSALIFKYFPNFPVSP 255
N+ ++S+RSFGV D + GL AG IDNYA++ +H++ + F Y P+ + P
Sbjct: 195 GGNLASLSARSFGVSDAISRGLVGAGPVIDNYASVARSHFDY-----VGFTYLPDTVILP 249
Query: 256 TFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQ 315
T+ +T + ++ +A F+ FLLS GQ+ L + K P+ L + F+
Sbjct: 250 TYCGLTAKAEHAAKAREFLSFLLSPEGQAILTEPEFAKTPL----SDGKLANSTAFV--- 302
Query: 316 PTIDYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTA--- 372
I+ Q L R V+K +FE I +L +++ W + K Q A P+ E+LT
Sbjct: 303 --IEKQQLFIRNNVIKALFEQAIAQQLPKLRYTWLAII-KAQGAMKDTPKNHEVLTQAIA 359
Query: 373 ----LPITEKQATDENYLETFKANE 393
+PI+E +A + F E
Sbjct: 360 LASRVPISEAEAMSPDLQTVFADYE 384
>gi|153836363|ref|ZP_01989030.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio
parahaemolyticus AQ3810]
gi|149750265|gb|EDM61010.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio
parahaemolyticus AQ3810]
Length = 432
Score = 171 bits (432), Expect = 9e-41, Method: Composition-based stats.
Identities = 122/368 (33%), Positives = 185/368 (50%), Gaps = 21/368 (5%)
Query: 23 LGRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDL 82
L A ELVI TTFS ++ L+ ++ + +R+++R + S +L +IDL
Sbjct: 25 LTMAAEKELVILTTFSQAPITALVDDFTQHYPDAEVRVVHRRTQSSLQLLSKSYMKDIDL 84
Query: 83 VLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEIL--QKTTVAFSLSGCGIFSNVALLE 140
VLSSSP L L + RLA + + K P +L VAF SG GI N L
Sbjct: 85 VLSSSPFLMQELSNEHRLADMSSRVQVPKWLSPYLLPNNDQVVAFGYSGAGIVWNKDYLA 144
Query: 141 NAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANV 200
+ P + L +P G V MS+PSRS TT +M+E++L + GWQ+GW ++ V AN+
Sbjct: 145 ANHLPEPKRFQDLTNPLYFGHVTMSTPSRSGTTQLMVESVLSQYGWQEGWRILLNVGANL 204
Query: 201 GTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAI 260
TISSRSFGV D + G G TID+YA L+ D + F Y +F + PT+IA
Sbjct: 205 ATISSRSFGVADYIAKGKFGIGPTIDSYA-LIAQRKFD---YVGFAYDQDFTLMPTYIAQ 260
Query: 261 TTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDY 320
+ + A +FI LLS Q + S K L T ++ P +D
Sbjct: 261 INRGKSDKLAESFIAHLLSKEVQEQMESSTFSKT---------ALDDTARYGGENPVLDL 311
Query: 321 QLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQA-GHP-----LPELREILTALP 374
+ ++ R+ ++ L+F+ I RL ++Q+ W L + + A G P L + + L LP
Sbjct: 312 EQVMPREALINLIFDTAITKRLPELQDAWLSLIKLNRLADGKPEKQRSLQAIEKQLFELP 371
Query: 375 ITEKQATD 382
+++ Q T+
Sbjct: 372 LSKAQVTE 379
>gi|27366663|ref|NP_762190.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio
vulnificus CMCP6]
gi|27358229|gb|AAO07180.1|AE016808_200 ABC-type Fe3+ transport system, periplasmic component [Vibrio
vulnificus CMCP6]
Length = 433
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 116/377 (30%), Positives = 196/377 (51%), Gaps = 24/377 (6%)
Query: 17 VIALFCLGRAYSN---ELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFD 73
+ +L C G + ++ E+V+ TTFS E LS LI E++ + +R ++R S S +L
Sbjct: 16 LFSLVCFGASAASTDKEIVVLTTFSQEPLSILIDEFKLRHPDAEVRFIHRRSESSIQLLG 75
Query: 74 DEKNDNIDLVLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEIL--QKTTVAFSLSGCG 131
+IDLVLSSSP L L E +RL + + P +L Q+ + SG G
Sbjct: 76 KTYMQDIDLVLSSSPFLMQKLSESERLGDVAQHETLPSWMSPYVLPPQQQVLTIGYSGAG 135
Query: 132 IFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWA 191
I N L+ ++++P + L G + MS+PSRS TT +M+E++L + GWQ GW
Sbjct: 136 IVWNRDYLQAHQLNIPERFIDLTRSQYFGHITMSTPSRSGTTQMMVESILSRYGWQDGWR 195
Query: 192 LIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNF 251
++ + AN+ TISSRSFGV D + G G TID+YA LL D H F+ +F
Sbjct: 196 ILINIGANLATISSRSFGVSDYIAKGQFGLGPTIDSYA-LLIQRKFD-HVGFAFE--SDF 251
Query: 252 PVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQF 311
+ PT+IA T ++ F+ LLS P Q++L + K+ L+ T++
Sbjct: 252 TLMPTYIAKTQRASADPLVDDFMAMLLSAPMQASLGKNSFAKF---------SLHDTERK 302
Query: 312 LFSQPTIDYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQ-KEQQAGHP-----LPE 365
P ++ +++R+ + +F+ I RL ++++ W+ + Q ++ A +P L
Sbjct: 303 DGDHPALNISAIMQREVLTNRLFDLAITKRLPELKDTWQTIIQLRKAYADNPAVLTQLES 362
Query: 366 LREILTALPITEKQATD 382
+R++ +P++E + +
Sbjct: 363 IRQLAFDIPVSEAEVLE 379
>gi|54309923|ref|YP_130943.1| hypothetical phosphoglycerate transport regulatory protein PgtC
[Photobacterium profundum SS9]
gi|46914362|emb|CAG21141.1| hypothetical phosphoglycerate transport regulatory protein PgtC
[Photobacterium profundum SS9]
Length = 419
Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats.
Identities = 117/370 (31%), Positives = 192/370 (51%), Gaps = 26/370 (7%)
Query: 28 SNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSS 87
+N L+I TTF+ S++ + ++++ ++I++L+R ++S +L +D IDLV+SSS
Sbjct: 20 TNHLIILTTFTEASITPITNKFQQLYPDSTIKVLHRRADSGVRLLSKNDHD-IDLVISSS 78
Query: 88 PMLFYHLQEKQRLAALPDKFSQGKKFV--PEILQKTT---VAFSLSGCGIFSNVALLENA 142
P LF L +K L L + + + P L+K + F S G+ N L
Sbjct: 79 PALFLPLIKKGTLKPLATTATAVNQALLQPTYLKKHSDDIAIFGYSAYGLMWNNDYLTKH 138
Query: 143 EVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGT 202
+D P D+ LI P +IMSSP+RS TTH+M+E +LQ+ GW++GW ++ Q+ N+ +
Sbjct: 139 NLDQPKDFKSLIEPQYFRHLIMSSPARSSTTHLMVENVLQQHGWKEGWKMLLQMGGNLAS 198
Query: 203 ISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITT 262
IS+RSFGV D + GL G ID++A N + F Y + P+ P++IA
Sbjct: 199 ISARSFGVSDAISRGLVGIGPVIDSFA----FENKQRFPFIGFTYQIDSPLMPSYIAAVQ 254
Query: 263 NSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQL 322
N + S FI FLLS+ Q L S + KYP+ TQ F+ + D++L
Sbjct: 255 NQHQANHTSHFIDFLLSNDMQKKLPESSLYKYPLNS-------EITQTFI--SQSFDFKL 305
Query: 323 LLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELRE-------ILTALPI 375
+ R V+K +FE I H+L + + W+++ + + + H E + + P+
Sbjct: 306 MQHRDVVIKHLFEQTIAHQLTLLNQAWQLINEAAKCSSHFTNEQHRQYDLAISLASTPPV 365
Query: 376 TEKQATDENY 385
TE Q+ Y
Sbjct: 366 TEAQSNSNIY 375
>gi|117620576|ref|YP_854556.1| ABC-type Fe3+ transport system, periplasmic component [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117561983|gb|ABK38931.1| ABC-type Fe3+ transport system, periplasmic component [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 404
Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats.
Identities = 115/366 (31%), Positives = 183/366 (50%), Gaps = 21/366 (5%)
Query: 31 LVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSSPML 90
L + T+FS + +I + +Q I ++ R + +L + +D+++SSSP
Sbjct: 12 LTVLTSFSEAPVKAVIEGFAEQYPGVRIEVIYRRTIPSLRLLTEAGAPKVDIIMSSSPTF 71
Query: 91 FYHLQEKQRLAALPDKFSQGKKFVPEILQ--KTTVAFSLSGCGIFSNVALLENAEVDVPT 148
F L + LAALP++ K P L S GI N L ++ +PT
Sbjct: 72 FNTLDKAGLLAALPNETMPPKWLTPHTLGLGNKVAVVGYSSSGIMYNRHYLAKYQLPLPT 131
Query: 149 DWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISSRSF 208
W L SP G V+MSSPS+S TTH+M+E++LQ+ GWQQGWAL+ ++ N+ I++RSF
Sbjct: 132 TWQQLASPLFMGHVMMSSPSQSGTTHMMVESVLQQYGWQQGWALLMRLGGNLSAITARSF 191
Query: 209 GVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNSTNSR 268
GV D + GL AG+ ID+YA L + D + F P+ + PT++ + +ST
Sbjct: 192 GVSDGISRGLAGAGLVIDSYA-LNSQARFD---HVGFNIMPDSVILPTYLGVARHSTQPA 247
Query: 269 QASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQLLLKRQE 328
A+ FI +LLSD GQ+ + M K + S P A Q ++ D LL +R
Sbjct: 248 SAALFIQYLLSDSGQAIIATPGMAKATL-----SQPRLARQ----TRYVTDKALLYRRAG 298
Query: 329 VVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHP-----LPELREILTALPITEKQATDE 383
++K +FE I + +++ W+ + G P L + + P++E++A D
Sbjct: 299 LLKALFEQTITQQRPRLKMTWQGI-NGLNTHGEPWRVALLEQAVAKASTPPLSEQEAQDP 357
Query: 384 NYLETF 389
L F
Sbjct: 358 ALLALF 363
>gi|90412845|ref|ZP_01220845.1| hypothetical phosphoglycerate transport regulatory protein PgtC
[Photobacterium profundum 3TCK]
gi|90326204|gb|EAS42631.1| hypothetical phosphoglycerate transport regulatory protein PgtC
[Photobacterium profundum 3TCK]
Length = 417
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 115/367 (31%), Positives = 191/367 (52%), Gaps = 23/367 (6%)
Query: 28 SNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSS 87
+N L+I TTFS S++ + ++++ ++I++L+R ++S +L +D IDLV+SSS
Sbjct: 20 TNHLIILTTFSEASITPVTNKFQQLYPDSTIKILHRRADSGVRLLSKNDHD-IDLVISSS 78
Query: 88 PMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKT--TVAFSLSGCGIFSNVALLENAEVD 145
P LF L +K L LP +Q + ++ + F S G+ N L ++
Sbjct: 79 PALFLPLVKKGTLKPLPTTINQTLQQQTDLKTHSDDIAIFGYSAYGLMWNNNYLTKHNLE 138
Query: 146 VPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISS 205
P D+ LI P +IMSSP+RS T H+M+E +LQ+ GW+ GW ++ Q+ N+ +IS+
Sbjct: 139 QPKDFKSLIEPQYFRHLIMSSPARSSTMHLMVENILQQHGWKGGWKMLLQMGGNLASISA 198
Query: 206 RSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNST 265
RSFGV D + GL G ID++A N + F Y + P+ P++IA N
Sbjct: 199 RSFGVSDAISRGLVGIGPVIDSFA----FENKQRFPFIGFTYQIDSPLMPSYIAAVKNLH 254
Query: 266 NSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQLLLK 325
+ S FI FLLSD Q L S + KYP+ TQ F+ + D++L+
Sbjct: 255 QANHTSHFIDFLLSDNMQKKLPESSLYKYPLNS-------EITQS--FTSQSFDFKLMQH 305
Query: 326 RQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELRE-------ILTALPITEK 378
R ++K +FE I H+L + + W+++ + + + H E + + + P+TE
Sbjct: 306 RDVMIKHLFEQAIAHQLTLLNQAWQLINEAAKCSSHFTNEQQRQYDLAISLASTPPVTEA 365
Query: 379 QATDENY 385
Q+ + Y
Sbjct: 366 QSHSDIY 372
>gi|153829195|ref|ZP_01981862.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio
cholerae 623-39]
gi|148875308|gb|EDL73443.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio
cholerae 623-39]
Length = 440
Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 115/366 (31%), Positives = 189/366 (51%), Gaps = 25/366 (6%)
Query: 24 GRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLV 83
+A ELVI TTFS E L L+ E+ ++ +++++R + S +L + NIDLV
Sbjct: 33 AQAAERELVILTTFSREPLLPLVEEFSRRYQGIEVQIIHRRAQSSVQLLNKSYIQNIDLV 92
Query: 84 LSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKT--TVAFSLSGCGIFSNVALLEN 141
LSSSP L +L + +LAALP+ + P L T SG G+ N L+
Sbjct: 93 LSSSPYLMQNLAQSGKLAALPEPMQTPEWLKPYALPMTEHVATIGYSGAGLVWNQDYLKT 152
Query: 142 AEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVG 201
++ P +S L P G V MS+P+RS TT +M+E++L K GWQ+GW ++ +V AN+
Sbjct: 153 HQLPEPKQFSDLAKPVYFGHVTMSTPARSGTTQMMVESILSKYGWQKGWEILLRVGANLA 212
Query: 202 TISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAIT 261
T S+RSFGV D + G A G TID+YA +L + F Y +F + PT++A
Sbjct: 213 TASARSFGVSDYIANGQFAVGPTIDSYALILGR----KLDYVQFVYDESFTLMPTYVAQI 268
Query: 262 TNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQ 321
+ N + A AFI L+S+ Q+ + + K+ + Q L ++
Sbjct: 269 RQNHNDQYAKAFIELLMSNAVQTNMEGNDFAKHSV-----------QDQSLVNERFTRLP 317
Query: 322 L--LLKRQEVVKLMFEHQIIHRLAQIQEN-WKILYQKEQQAGHP-----LPELREILTAL 373
+ +++R+E + +F+ I +L Q+++ +L K Q A P + ++ + +
Sbjct: 318 MGSIIRREECLNDLFDLAITKQLPQLKDTLLAVLEAKAQFARRPSVLAKIEQIERTVFTM 377
Query: 374 PITEKQ 379
PITE++
Sbjct: 378 PITEQE 383
>gi|150421449|gb|EDN13730.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio
cholerae RC385]
Length = 440
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 115/366 (31%), Positives = 188/366 (51%), Gaps = 25/366 (6%)
Query: 24 GRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLV 83
+A ELVI TTFS E L L+ E+ ++ +++++R + S +L + NIDLV
Sbjct: 33 AQAAERELVILTTFSREPLLPLVEEFSRRYQGIEVQIIHRRAQSSVQLLNKSYIQNIDLV 92
Query: 84 LSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKT--TVAFSLSGCGIFSNVALLEN 141
LSSSP L +L + +LAALP+ + P L T SG G+ N L+
Sbjct: 93 LSSSPYLMQNLAQSGKLAALPEPMQTPEWLKPYALPMTEHVATIGYSGAGLVWNQDYLKT 152
Query: 142 AEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVG 201
++ P +S L P G V MS+P+RS TT +M+E++L K GWQ+GW ++ +V AN+
Sbjct: 153 HQLPEPKQFSDLAKPVYFGHVTMSTPARSGTTQMMVESILAKYGWQKGWEILLRVGANLA 212
Query: 202 TISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAIT 261
T S+RSFGV D + G A G TID+YA +L + F Y +F + PT++A
Sbjct: 213 TASARSFGVSDYIANGQFAVGPTIDSYALILGR----KLDYVQFVYDESFTLMPTYVAQI 268
Query: 262 TNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQ 321
+ N + A AFI L+S Q+ + + K+ + Q L ++
Sbjct: 269 RQNHNDQYAKAFIELLMSSAVQTNMEGNDFAKHSV-----------QDQSLVNERFTRLP 317
Query: 322 L--LLKRQEVVKLMFEHQIIHRLAQIQEN-WKILYQKEQQAGHP-----LPELREILTAL 373
+ +++R+E + +F+ I +L Q+++ +L K Q A P + ++ + +
Sbjct: 318 MGSIIRREECLNDLFDLAITKQLPQLKDTLLAVLEAKAQFARRPSVLAKIEQIERTVFTM 377
Query: 374 PITEKQ 379
PITE++
Sbjct: 378 PITEQE 383
>gi|116217557|ref|ZP_01483354.1| hypothetical protein VchoR_02000707 [Vibrio cholerae RC385]
Length = 414
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 115/366 (31%), Positives = 188/366 (51%), Gaps = 25/366 (6%)
Query: 24 GRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLV 83
+A ELVI TTFS E L L+ E+ ++ +++++R + S +L + NIDLV
Sbjct: 7 AQAAERELVILTTFSREPLLPLVEEFSRRYQGIEVQIIHRRAQSSVQLLNKSYIQNIDLV 66
Query: 84 LSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKT--TVAFSLSGCGIFSNVALLEN 141
LSSSP L +L + +LAALP+ + P L T SG G+ N L+
Sbjct: 67 LSSSPYLMQNLAQSGKLAALPEPMQTPEWLKPYALPMTEHVATIGYSGAGLVWNQDYLKT 126
Query: 142 AEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVG 201
++ P +S L P G V MS+P+RS TT +M+E++L K GWQ+GW ++ +V AN+
Sbjct: 127 HQLPEPKQFSDLAKPVYFGHVTMSTPARSGTTQMMVESILAKYGWQKGWEILLRVGANLA 186
Query: 202 TISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAIT 261
T S+RSFGV D + G A G TID+YA +L + F Y +F + PT++A
Sbjct: 187 TASARSFGVSDYIANGQFAVGPTIDSYALILGR----KLDYVQFVYDESFTLMPTYVAQI 242
Query: 262 TNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQ 321
+ N + A AFI L+S Q+ + + K+ + Q L ++
Sbjct: 243 RQNHNDQYAKAFIELLMSSAVQTNMEGNDFAKHSV-----------QDQSLVNERFTRLP 291
Query: 322 L--LLKRQEVVKLMFEHQIIHRLAQIQEN-WKILYQKEQQAGHP-----LPELREILTAL 373
+ +++R+E + +F+ I +L Q+++ +L K Q A P + ++ + +
Sbjct: 292 MGSIIRREECLNDLFDLAITKQLPQLKDTLLAVLEAKAQFARRPSVLAKIEQIERTVFTM 351
Query: 374 PITEKQ 379
PITE++
Sbjct: 352 PITEQE 357
>gi|15601462|ref|NP_233093.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae O1 biovar eltor str. N16961]
gi|121725869|ref|ZP_01679169.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae V52]
gi|147672123|ref|YP_001215483.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio
cholerae O395]
gi|153818596|ref|ZP_01971263.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae NCTC 8457]
gi|153820703|ref|ZP_01973370.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae B33]
gi|9658125|gb|AAF96605.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae O1 biovar eltor str. N16961]
gi|121631634|gb|EAX64002.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae V52]
gi|125619541|gb|EAZ48069.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae MO10]
gi|126510879|gb|EAZ73473.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae NCTC 8457]
gi|126521746|gb|EAZ78969.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae B33]
gi|146314506|gb|ABQ19046.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio
cholerae O395]
Length = 440
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 114/366 (31%), Positives = 188/366 (51%), Gaps = 25/366 (6%)
Query: 24 GRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLV 83
+A ELVI TTFS E L L+ E+ ++ +++++R + S +L + NIDLV
Sbjct: 33 AQAAERELVILTTFSREPLLPLVEEFSRRYQGIEVQIIHRRAQSSVQLLNKSYIQNIDLV 92
Query: 84 LSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKT--TVAFSLSGCGIFSNVALLEN 141
LSSSP L +L + +LAALP+ + P L T SG G+ N L+
Sbjct: 93 LSSSPYLMQNLAQSGKLAALPEPMQTPEWLKPYALPMTEHVATIGYSGAGLVWNQDYLKT 152
Query: 142 AEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVG 201
++ P +S L P G V MS+P+RS TT +M+E++L K GWQ+GW ++ +V AN+
Sbjct: 153 HQLPEPKQFSDLAKPVYFGHVTMSTPARSGTTQMMVESILAKYGWQKGWEILLRVGANLA 212
Query: 202 TISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAIT 261
T S+RSFGV D + G A G TID+YA +L + F Y +F + PT++A
Sbjct: 213 TASARSFGVSDYIANGQFAVGPTIDSYALILGR----KLDYVQFVYDESFTLMPTYVAQI 268
Query: 262 TNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQ 321
+ N + A AFI L+S Q+ + + K+ + Q L ++
Sbjct: 269 RQNHNDQYAKAFIELLMSSAVQTNMEGNDFAKHSV-----------QDQSLVNERFTRLP 317
Query: 322 L--LLKRQEVVKLMFEHQIIHRLAQIQEN-WKILYQKEQQAGHP-----LPELREILTAL 373
+ +++R+E + +F+ I +L Q+++ +L K Q A P + ++ + +
Sbjct: 318 MGSIIRREECLNDLFDLAITKQLPQLKDTLLAVLEAKAQFARRPSVLAKIEQIERTVFTM 377
Query: 374 PITEKQ 379
PI+E++
Sbjct: 378 PISEQE 383
>gi|153800897|ref|ZP_01955483.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae MZO-3]
gi|124123607|gb|EAY42350.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae MZO-3]
Length = 440
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 114/366 (31%), Positives = 188/366 (51%), Gaps = 25/366 (6%)
Query: 24 GRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLV 83
+A ELVI TTFS E L L+ E+ ++ +++++R + S +L + NIDLV
Sbjct: 33 AQAAERELVILTTFSREPLLPLVEEFSRRYQGIEVQIIHRRAQSSVQLLNKSYIQNIDLV 92
Query: 84 LSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKT--TVAFSLSGCGIFSNVALLEN 141
LSSSP L +L + +LAALP+ + P L T SG G+ N L+
Sbjct: 93 LSSSPYLMQNLAQSGKLAALPEPMQTPEWLKPYALPMTEHVATIGYSGAGLVWNQDYLKT 152
Query: 142 AEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVG 201
++ P +S L P G V MS+P+RS TT +M+E++L K GWQ+GW ++ +V AN+
Sbjct: 153 HQLPEPKQFSDLAKPVYFGHVTMSTPARSGTTQMMVESILAKYGWQKGWEILLRVGANLA 212
Query: 202 TISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAIT 261
T S+RSFGV D + G A G TID+YA +L + F Y +F + PT++A
Sbjct: 213 TASARSFGVSDYIANGQFAVGPTIDSYALILGR----KLDYVQFVYDESFTLMPTYVAQI 268
Query: 262 TNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQ 321
+ N + A AFI L+S Q+ + + K+ + Q L ++
Sbjct: 269 RQNHNDQYAKAFIELLMSSAVQTNMEGNDFAKHSV-----------QDQSLVNERFTRLP 317
Query: 322 L--LLKRQEVVKLMFEHQIIHRLAQIQEN-WKILYQKEQQAGHP-----LPELREILTAL 373
+ +++R+E + +F+ I +L Q+++ +L K Q A P + ++ + +
Sbjct: 318 MGSIIRREECLNDLFDLAITKQLPQLKDTLLAVLEAKAQFARRPSVLAKIEQIERTVFTM 377
Query: 374 PITEKQ 379
PI+E++
Sbjct: 378 PISEQE 383
>gi|125622284|gb|EAZ50605.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae V51]
Length = 440
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 114/366 (31%), Positives = 188/366 (51%), Gaps = 25/366 (6%)
Query: 24 GRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLV 83
+A ELVI TTFS E L L+ E+ ++ +++++R + S +L + NIDLV
Sbjct: 33 AQAAERELVILTTFSREPLLPLVEEFSRRYQGIEVQIIHRRAQSSVQLLNKSYIQNIDLV 92
Query: 84 LSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKT--TVAFSLSGCGIFSNVALLEN 141
LSSSP L +L + +LAALP+ + P L T SG G+ N L+
Sbjct: 93 LSSSPYLMQNLAQSGKLAALPEPMQTPEWLKPYALPMTEHVATIGYSGAGLVWNQDYLKT 152
Query: 142 AEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVG 201
++ P +S L P G V MS+P+RS TT +M+E++L K GWQ+GW ++ +V AN+
Sbjct: 153 HQLPEPKQFSDLAKPVYFGHVTMSTPARSGTTQMMVESILAKYGWQKGWEILLRVGANLA 212
Query: 202 TISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAIT 261
T S+RSFGV D + G A G TID+YA +L + F Y +F + PT++A
Sbjct: 213 TASARSFGVSDYIANGQFAVGPTIDSYALILGR----KLDYVQFVYDESFTLMPTYVAQI 268
Query: 262 TNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQ 321
+ N + A AFI L+S Q+ + + K+ + Q L ++
Sbjct: 269 RQNHNDQYAKAFIELLMSSAVQTNMEGNDFAKHSV-----------QDQSLVNERFTRLP 317
Query: 322 L--LLKRQEVVKLMFEHQIIHRLAQIQEN-WKILYQKEQQAGHP-----LPELREILTAL 373
+ +++R+E + +F+ I +L Q+++ +L K Q A P + ++ + +
Sbjct: 318 MGSIIRREECLNDLFDLAITKQLPQLKDTLLAVLEAKAQFARRPSVLAKIEQIERTVFTM 377
Query: 374 PITEKQ 379
PI+E++
Sbjct: 378 PISEQE 383
>gi|153211917|ref|ZP_01947764.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae 1587]
gi|153824345|ref|ZP_01977012.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae MZO-2]
gi|124116993|gb|EAY35813.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae 1587]
gi|149741899|gb|EDM55928.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae MZO-2]
gi|150424224|gb|EDN16162.1| phosphoglycerate transport regulatory protein PgtC, putative
[Vibrio cholerae AM-19226]
Length = 440
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 114/366 (31%), Positives = 188/366 (51%), Gaps = 25/366 (6%)
Query: 24 GRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLV 83
+A ELVI TTFS E L L+ E+ ++ +++++R + S +L + NIDLV
Sbjct: 33 AQAAERELVILTTFSREPLLPLVEEFSRRYQGIEVQIIHRRAQSSVQLLNKSYIQNIDLV 92
Query: 84 LSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKT--TVAFSLSGCGIFSNVALLEN 141
LSSSP L +L + +LAALP+ + P L T SG G+ N L+
Sbjct: 93 LSSSPYLMQNLAQSGKLAALPEPMQTPEWLKPYALPMTEHVATIGYSGAGLVWNQDYLKT 152
Query: 142 AEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVG 201
++ P +S L P G V MS+P+RS TT +M+E++L K GWQ+GW ++ +V AN+
Sbjct: 153 HQLPEPKQFSDLAKPVYFGHVTMSTPARSGTTQMMVESILAKYGWQKGWEILLRVGANLA 212
Query: 202 TISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAIT 261
T S+RSFGV D + G A G TID+YA +L + F Y +F + PT++A
Sbjct: 213 TASARSFGVSDYIANGQFAVGPTIDSYALILGR----KLDYVQFVYDESFTLMPTYVAQI 268
Query: 262 TNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQ 321
+ N + A AFI L+S Q+ + + K+ + Q L ++
Sbjct: 269 RQNHNDQYAKAFIELLMSSAVQTNMEGNDFAKHSV-----------QDQSLVNERFTRLP 317
Query: 322 L--LLKRQEVVKLMFEHQIIHRLAQIQEN-WKILYQKEQQAGHP-----LPELREILTAL 373
+ +++R+E + +F+ I +L Q+++ +L K Q A P + ++ + +
Sbjct: 318 MGSIIRREECLNDLFDLAITKQLPQLKDTLLAVLEAKAQFARRPSVLAKIEQIERTVFTM 377
Query: 374 PITEKQ 379
PI+E++
Sbjct: 378 PISEQE 383
>gi|121585550|ref|ZP_01675346.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio
cholerae 2740-80]
gi|153220051|ref|ZP_01951620.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio
cholerae MAK 757]
gi|153820774|ref|ZP_01973441.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio
cholerae B33]
gi|121550167|gb|EAX60181.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio
cholerae 2740-80]
gi|124120611|gb|EAY39354.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio
cholerae MAK 757]
gi|126521817|gb|EAZ79040.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio
cholerae B33]
Length = 430
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 114/366 (31%), Positives = 188/366 (51%), Gaps = 25/366 (6%)
Query: 24 GRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLV 83
+A ELVI TTFS E L L+ E+ ++ +++++R + S +L + NIDLV
Sbjct: 23 AQAAERELVILTTFSREPLLPLVEEFSRRYQGIEVQIIHRRAQSSVQLLNKSYIQNIDLV 82
Query: 84 LSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKT--TVAFSLSGCGIFSNVALLEN 141
LSSSP L +L + +LAALP+ + P L T SG G+ N L+
Sbjct: 83 LSSSPYLMQNLAQSGKLAALPEPMQTPEWLKPYALPMTEHVATIGYSGAGLVWNQDYLKT 142
Query: 142 AEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVG 201
++ P +S L P G V MS+P+RS TT +M+E++L K GWQ+GW ++ +V AN+
Sbjct: 143 HQLPEPKQFSDLAKPVYFGHVTMSTPARSGTTQMMVESILAKYGWQKGWEILLRVGANLA 202
Query: 202 TISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAIT 261
T S+RSFGV D + G A G TID+YA +L + F Y +F + PT++A
Sbjct: 203 TASARSFGVSDYIANGQFAVGPTIDSYALILGR----KLDYVQFVYDESFTLMPTYVAQI 258
Query: 262 TNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQ 321
+ N + A AFI L+S Q+ + + K+ + Q L ++
Sbjct: 259 RQNHNDQYAKAFIELLMSSAVQTNMEGNDFAKHSV-----------QDQSLVNERFTRLP 307
Query: 322 L--LLKRQEVVKLMFEHQIIHRLAQIQEN-WKILYQKEQQAGHP-----LPELREILTAL 373
+ +++R+E + +F+ I +L Q+++ +L K Q A P + ++ + +
Sbjct: 308 MGSIIRREECLNDLFDLAITKQLPQLKDTLLAVLEAKAQFARRPSVLAKIEQIERTVFTM 367
Query: 374 PITEKQ 379
PI+E++
Sbjct: 368 PISEQE 373
>gi|153800735|ref|ZP_01955321.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio
cholerae MZO-3]
gi|124123710|gb|EAY42453.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio
cholerae MZO-3]
Length = 430
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 114/366 (31%), Positives = 188/366 (51%), Gaps = 25/366 (6%)
Query: 24 GRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLV 83
+A ELVI TTFS E L L+ E+ ++ +++++R + S +L + NIDLV
Sbjct: 23 AQAAERELVILTTFSREPLLPLVEEFSRRYQGIEVQIIHRRAQSSVQLLNKSYIQNIDLV 82
Query: 84 LSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKT--TVAFSLSGCGIFSNVALLEN 141
LSSSP L +L + +LAALP+ + P L T SG G+ N L+
Sbjct: 83 LSSSPYLMQNLAQSGKLAALPEPMQTPEWLKPYALPMTEHVATIGYSGAGLVWNQDYLKT 142
Query: 142 AEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVG 201
++ P +S L P G V MS+P+RS TT +M+E++L K GWQ+GW ++ +V AN+
Sbjct: 143 HQLPEPKQFSDLAKPVYFGHVTMSTPARSGTTQMMVESILAKYGWQKGWEILLRVGANLA 202
Query: 202 TISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAIT 261
T S+RSFGV D + G A G TID+YA +L + F Y +F + PT++A
Sbjct: 203 TASARSFGVSDYIANGQFAVGPTIDSYALILGR----KLDYVQFVYDESFTLMPTYVAQI 258
Query: 262 TNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQ 321
+ N + A AFI L+S Q+ + + K+ + Q L ++
Sbjct: 259 RQNHNDQYAKAFIELLMSSAVQTNMEGNDFAKHSV-----------QDQSLVNERFTRLP 307
Query: 322 L--LLKRQEVVKLMFEHQIIHRLAQIQEN-WKILYQKEQQAGHP-----LPELREILTAL 373
+ +++R+E + +F+ I +L Q+++ +L K Q A P + ++ + +
Sbjct: 308 MGSIIRREECLNDLFDLAITKQLPQLKDTLLAVLEAKAQFARRPSVLAKIEQIERTVFTM 367
Query: 374 PITEKQ 379
PI+E++
Sbjct: 368 PISEQE 373
>gi|116190399|ref|ZP_01480138.1| hypothetical protein VchoM_02000668 [Vibrio cholerae MO10]
Length = 421
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 114/366 (31%), Positives = 188/366 (51%), Gaps = 25/366 (6%)
Query: 24 GRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLV 83
+A ELVI TTFS E L L+ E+ ++ +++++R + S +L + NIDLV
Sbjct: 14 AQAAERELVILTTFSREPLLPLVEEFSRRYQGIEVQIIHRRAQSSVQLLNKSYIQNIDLV 73
Query: 84 LSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKT--TVAFSLSGCGIFSNVALLEN 141
LSSSP L +L + +LAALP+ + P L T SG G+ N L+
Sbjct: 74 LSSSPYLMQNLAQSGKLAALPEPMQTPEWLKPYALPMTEHVATIGYSGAGLVWNQDYLKT 133
Query: 142 AEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVG 201
++ P +S L P G V MS+P+RS TT +M+E++L K GWQ+GW ++ +V AN+
Sbjct: 134 HQLPEPKQFSDLAKPVYFGHVTMSTPARSGTTQMMVESILAKYGWQKGWEILLRVGANLA 193
Query: 202 TISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAIT 261
T S+RSFGV D + G A G TID+YA +L + F Y +F + PT++A
Sbjct: 194 TASARSFGVSDYIANGQFAVGPTIDSYALILGR----KLDYVQFVYDESFTLMPTYVAQI 249
Query: 262 TNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQ 321
+ N + A AFI L+S Q+ + + K+ + Q L ++
Sbjct: 250 RQNHNDQYAKAFIELLMSSAVQTNMEGNDFAKHSV-----------QDQSLVNERFTRLP 298
Query: 322 L--LLKRQEVVKLMFEHQIIHRLAQIQEN-WKILYQKEQQAGHP-----LPELREILTAL 373
+ +++R+E + +F+ I +L Q+++ +L K Q A P + ++ + +
Sbjct: 299 MGSIIRREECLNDLFDLAITKQLPQLKDTLLAVLEAKAQFARRPSVLAKIEQIERTVFTM 358
Query: 374 PITEKQ 379
PI+E++
Sbjct: 359 PISEQE 364
>gi|116220801|ref|ZP_01486223.1| hypothetical protein VchoV5_02001155 [Vibrio cholerae V51]
Length = 430
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 114/366 (31%), Positives = 188/366 (51%), Gaps = 25/366 (6%)
Query: 24 GRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLV 83
+A ELVI TTFS E L L+ E+ ++ +++++R + S +L + NIDLV
Sbjct: 23 AQAAERELVILTTFSREPLLPLVEEFSRRYQGIEVQIIHRRAQSSVQLLNKSYIQNIDLV 82
Query: 84 LSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKT--TVAFSLSGCGIFSNVALLEN 141
LSSSP L +L + +LAALP+ + P L T SG G+ N L+
Sbjct: 83 LSSSPYLMQNLAQSGKLAALPEPMQTPEWLKPYALPMTEHVATIGYSGAGLVWNQDYLKT 142
Query: 142 AEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVG 201
++ P +S L P G V MS+P+RS TT +M+E++L K GWQ+GW ++ +V AN+
Sbjct: 143 HQLPEPKQFSDLAKPVYFGHVTMSTPARSGTTQMMVESILAKYGWQKGWEILLRVGANLA 202
Query: 202 TISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAIT 261
T S+RSFGV D + G A G TID+YA +L + F Y +F + PT++A
Sbjct: 203 TASARSFGVSDYIANGQFAVGPTIDSYALILGR----KLDYVQFVYDESFTLMPTYVAQI 258
Query: 262 TNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQFLFSQPTIDYQ 321
+ N + A AFI L+S Q+ + + K+ + Q L ++
Sbjct: 259 RQNHNDQYAKAFIELLMSSAVQTNMEGNDFAKHSV-----------QDQSLVNERFTRLP 307
Query: 322 L--LLKRQEVVKLMFEHQIIHRLAQIQEN-WKILYQKEQQAGHP-----LPELREILTAL 373
+ +++R+E + +F+ I +L Q+++ +L K Q A P + ++ + +
Sbjct: 308 MGSIIRREECLNDLFDLAITKQLPQLKDTLLAVLEAKAQFARRPSVLAKIEQIERTVFTM 367
Query: 374 PITEKQ 379
PI+E++
Sbjct: 368 PISEQE 373
>gi|90579342|ref|ZP_01235152.1| hypothetical phosphoglycerate transport regulatory protein PgtC
[Vibrio angustum S14]
gi|90440175|gb|EAS65356.1| hypothetical phosphoglycerate transport regulatory protein PgtC
[Vibrio angustum S14]
Length = 416
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 97/334 (29%), Positives = 176/334 (52%), Gaps = 17/334 (5%)
Query: 28 SNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSS 87
+ L++ TTFS L+ ++ E+++Q + +R++ R S +L + N +ID+++SSS
Sbjct: 20 TQNLIVLTTFSESVLNPIVKEFKQQYPKSEVRVIVRREESGLRLLQ-QNNHDIDIIISSS 78
Query: 88 PMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALLENAEVDVP 147
P F L Q+L L + K P L + ++F +G G+ N L ++ +P
Sbjct: 79 PTFFQPLINNQKLLPLNEA---KIKPTPPQLSRNVISFGHTGFGLLWNNNYLNKNKLPIP 135
Query: 148 TDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISSRS 207
+ LI P+ + +SSP RSDTTH+MIE +LQ+ GW +GW L++Q+ N+ ++ + +
Sbjct: 136 SSLKDLIKPHYYRHISISSPYRSDTTHLMIENILQQYGWVEGWRLLYQIGGNLASVETSA 195
Query: 208 FGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNSTNS 267
F + + + GL G +D YA H S + F Y P P+ P ++A+ NS +S
Sbjct: 196 FSLSEAISRGLIGIGPVVDRYA----HTYKRQFSFVDFSYQPQSPLLPHYVAMVKNSHHS 251
Query: 268 RQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQ--QFLFSQPTIDYQLLLK 325
+ F+ LLS Q+ L + LA + + + + F+ ++DY+++ +
Sbjct: 252 QFTRDFVSLLLSQECQTKLTIDEQ-------LANNRDIDRDEFIKNTFNVESLDYEVIQQ 304
Query: 326 RQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQA 359
R +VK +FE I +L Q+ + W++L+ E +
Sbjct: 305 RSGLVKHLFEQTISSQLPQLNQVWQLLHSIEASS 338
>gi|89072725|ref|ZP_01159290.1| hypothetical phosphoglycerate transport regulatory protein PgtC
[Photobacterium sp. SKA34]
gi|89051545|gb|EAR56999.1| hypothetical phosphoglycerate transport regulatory protein PgtC
[Photobacterium sp. SKA34]
Length = 416
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 97/334 (29%), Positives = 175/334 (52%), Gaps = 17/334 (5%)
Query: 28 SNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSS 87
+ L+I TTFS L+ ++ ++++Q + +R++ R S +L + N +ID+++SSS
Sbjct: 20 TQNLIILTTFSESVLNPIVKQFKQQYPKSEVRVIVRREESGLRLLQ-QNNHDIDIIISSS 78
Query: 88 PMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALLENAEVDVP 147
P F L Q+L LP ++ +K P+ L + +F +G G+ N L + +P
Sbjct: 79 PTFFQPLINNQKL--LPLSEAKLRK-APQRLSRNVFSFGYTGFGLLWNNNYLNKNNLPIP 135
Query: 148 TDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISSRS 207
LI P + +SSP RSDTTH+MIE +LQ+ GW +GW L++Q+ N+ ++ + +
Sbjct: 136 GRLKDLIKPYYYRHISISSPYRSDTTHLMIENILQQYGWVEGWRLLYQIGGNLASVETSA 195
Query: 208 FGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNSTNS 267
F + + + GL G +D YA H S + F Y P + P ++A+ NS +S
Sbjct: 196 FSLSEAISRGLIGIGPVVDRYA----HTYKKQFSFIDFSYQPQSHLLPHYVAMVKNSHHS 251
Query: 268 RQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQ--QFLFSQPTIDYQLLLK 325
+ F+ LLS Q+ L ++ LA + + + + F+ ++DY ++ +
Sbjct: 252 QFTRDFVSLLLSQECQTKLTINEQ-------LANNSDINRDEFIKNTFNVESLDYDVIQQ 304
Query: 326 RQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQA 359
R +VK +FE I +L Q+ + W++L+ E +
Sbjct: 305 RSGLVKHLFEQTISSQLPQLNQVWQLLHSIEASS 338
>gi|69934917|ref|ZP_00629948.1| extracellular solute-binding protein, family 1 [Paracoccus
denitrificans PD1222]
gi|119387381|ref|YP_918415.1| extracellular solute-binding protein, family 1 [Paracoccus
denitrificans PD1222]
gi|119377956|gb|ABL72719.1| extracellular solute-binding protein, family 1 [Paracoccus
denitrificans PD1222]
Length = 440
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 106/395 (26%), Positives = 188/395 (47%), Gaps = 38/395 (9%)
Query: 26 AYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNS-LNKLFDDEKNDNIDLVL 84
A+++ + + T+F + +E T++ +++R +N+ ++ L + + IDL+
Sbjct: 19 AFADTVTVVTSFPRDLTDPFKAAFETAYPGTTLEVVSRNTNAAVSHLQETRGANTIDLMW 78
Query: 85 SSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEIL--------QKTTVAFSLSGCGIFSNV 136
+S+P F L+E+ LA + +F +P+ + T F+ SG GI N
Sbjct: 79 ASAPDAFEVLKEEGLLAKVDVQFEG----IPDAIGGYPVHDPDGTYFGFAASGYGIMYNT 134
Query: 137 ALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQV 196
++ ++ V +W L G V MSSPSRS TTH+ +E +LQ +GW QGWA +
Sbjct: 135 RYVQANDLPVAQEWEDLKRAEYNGHVAMSSPSRSGTTHLTVETVLQGEGWDQGWATWKWI 194
Query: 197 MANVGTISSRSFGVVDKVQAGLGAAGITIDNY--ANLLTHYNVDPHSALIFKYFPNFPVS 254
N+ T++ RSFGV D V +G GI ID + A+ + + V+ Y +
Sbjct: 195 SGNMNTVTERSFGVPDAVNSGATGFGIVIDFFGLASKASGFPVE------LVYPSVTAIV 248
Query: 255 PTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSH-----PLYATQ 309
P I I N+ N A F+ FLLS GQ L + + + P+ P A ++ P ++
Sbjct: 249 PANIGIIENAPNQEGARQFVEFLLSPEGQQVLLNPAIMRLPVNPEAYANAPEGFPNPFSE 308
Query: 310 QFLFSQPTIDYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHP------- 362
+F D R +V +F+ + +RL ++ + ++ +A H
Sbjct: 309 EFAPGAIEFDVDKSGVRYNLVNSLFDVLVTYRLDDLRA--AVAAVQKAEAAHAETGNEEA 366
Query: 363 ---LPELREILTALPITEKQATDENYLETFKANEA 394
+ E R ++ A+PITE+Q+ D ++ + F + A
Sbjct: 367 AALIAEARALVEAMPITEEQSLDPSFTQVFTISRA 401
>gi|118729411|ref|ZP_01577928.1| extracellular solute-binding protein, family 1 [Delftia acidovorans
SPH-1]
gi|118670856|gb|EAV77449.1| extracellular solute-binding protein, family 1 [Delftia acidovorans
SPH-1]
Length = 442
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 106/376 (28%), Positives = 170/376 (45%), Gaps = 26/376 (6%)
Query: 35 TTFSPESLSYLITEWEKQPNATSIRMLNR-TSNSLNKLFDDEKNDNIDLVLSSSPMLFYH 93
T+F E + +E I +LN+ T+ ++ + + + D++ +S+P F
Sbjct: 31 TSFPKELTTAYQKAFEAANPGIKIEILNKNTTAAVAYVRELPEGQRPDIMWASAPDAFEV 90
Query: 94 LQEKQRLAALPDKFSQGK-----KFVPEILQKTTVAFSLSGCGIFSNVALLENAEVDVPT 148
L + L A P+ + + Q +L+G GI N L+ ++ P
Sbjct: 91 LARNKLLTAAPETRNPAAPAKIGNYPLNDPQGLYYGQALAGYGIMWNTRYLKAHKLAAPK 150
Query: 149 DWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISSRSF 208
+WS L P G + +SSPSRS TT + +E +LQ +GW +GW + +M N ++ RSF
Sbjct: 151 EWSDLTRPEYFGHIAISSPSRSGTTQLTVETILQGEGWDKGWRQLLSMMGNAAAVTDRSF 210
Query: 209 GVVDKVQAGLGAAGITIDNY--ANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNSTN 266
V D V G GI ID + A + + VD F Y V P IA+ + N
Sbjct: 211 AVPDGVNNGQYGIGIVIDFFGLAGKYSGFPVD------FAYPAMTAVVPANIALIAGAKN 264
Query: 267 SRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLA--KSHPLYATQQFLFSQPTI--DYQL 322
+ +A F+ F +S PGQ L+ K+ + PI+P + K+ Y Q + + + D L
Sbjct: 265 ADEARKFMAFTMSVPGQQLLFDPKISRLPILPYSQLKAPAGYPVPQEVAQRAKVQFDANL 324
Query: 323 LLKRQEVVKLMFEHQIIHRLAQ-------IQENWKILYQKEQQAGHP-LPELREILTALP 374
R VV +F+ + RL + IQE K L K G L + R+I +
Sbjct: 325 SESRYAVVISLFDQMVTFRLKELQAATRAIQEAHKALQAKPNAKGQELLAQARDIAYSPL 384
Query: 375 ITEKQATDENYLETFK 390
+ E DE +LE F+
Sbjct: 385 VGEANVKDEQFLELFR 400
>gi|90406676|ref|ZP_01214869.1| phosphoglycerate transport regulatory protein PgtC, putative
[Psychromonas sp. CNPT3]
gi|90312129|gb|EAS40221.1| phosphoglycerate transport regulatory protein PgtC, putative
[Psychromonas sp. CNPT3]
Length = 428
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 116/389 (29%), Positives = 194/389 (49%), Gaps = 33/389 (8%)
Query: 9 FHSLLVVPVIALFCLGRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSL 68
F ++L++ +++L R ++I T+ S + L ++ ++ + +I+++ R S +
Sbjct: 10 FFTVLII-LMSLPAQSREEKENMIILTSLSEKPLQIILKGFKSKNPDINIKIIYRRSQAS 68
Query: 69 NKLFDDEKNDNIDLVLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLS 128
KL + +NI LV+SSSP L L E LA LP S P + K ++ +
Sbjct: 69 IKLLRQDYINNICLVISSSPFLMNQLIESNSLATLPLSISP-----PTWISKHSLVDTQK 123
Query: 129 GCGI-FSNVALLENAE------VDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALL 181
I +SN LL N++ + +P +W L + + M++P+RS TT IMIE++L
Sbjct: 124 VAIIGYSNTVLLWNSDYLTRNNLPIPHNWQDLTNAIYFHHLTMTTPTRSGTTQIMIESIL 183
Query: 182 QKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHS 241
Q GWQ+GW LI + AN+ TISSRSF V + + G G I++YA L S
Sbjct: 184 QHYGWQKGWRLILNMGANLATISSRSFSVSESISRGQIGLGAVIESYAVNLNDIPFLDSS 243
Query: 242 ALIFKYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAK 301
AL N + P +I I + A FI ++LS+ QS L + K+ + K
Sbjct: 244 AL-----NNVALMPLYIGIIKKQQQNELALKFIKYILSNNVQSNLIQTPFAKHSV---NK 295
Query: 302 SHPLYATQQFLFSQPTIDYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGH 361
+ PL+ FL D LL+ R+ ++ +F+ I +L Q+Q+ W + +++ H
Sbjct: 296 ALPLHQKNLFL------DKDLLISREFIINRLFDLAISEQLPQLQDAWLNIITAQKKYKH 349
Query: 362 PLPELREI------LTALPITEKQATDEN 384
L++I L LPITE++ +E+
Sbjct: 350 SARHLKKIQQAKHQLFTLPITEQEVQEES 378
>gi|115422014|emb|CAJ48536.1| ABC transporter, substrate-binding protein [Bordetella avium 197N]
Length = 440
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 100/383 (26%), Positives = 174/383 (45%), Gaps = 31/383 (8%)
Query: 35 TTFSPESLSYLITEWEKQPNATSIRMLNR-TSNSLNKLFDDEKNDNIDLVLSSSPMLFYH 93
T+F + +EK ++ +LN+ T + + + + ++ +S+P F
Sbjct: 28 TSFPKDLTQVYKAAFEKANPGVTLEILNKNTVSGIAFVRETPAGQRPEVFWASAPDAFEV 87
Query: 94 LQEKQRLAALPDKFSQGKKFVPEILQKTTV--------AFSLSGCGIFSNVALLENAEVD 145
L + LA PD + K VP+ + + +L+G GI N ++ ++
Sbjct: 88 LARDKLLAKAPDALN---KAVPDKIGSYPINDPSGLYMGQALAGYGIMYNTRYIKANKLP 144
Query: 146 VPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISS 205
P +W L+SP G V +++PSRS T H+ +E +LQ +GW +GW I ++ N ++
Sbjct: 145 PPLEWKDLLSPQWFGHVGITAPSRSGTMHLTVETILQGEGWDEGWQTILRMSGNASAVTE 204
Query: 206 RSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNST 265
RSFGV D V G AG ID + L + Y+ P + F Y + P IA+ +
Sbjct: 205 RSFGVPDGVNNGQFGAGPVID-FFGLSSKYSKFP---VEFVYPTETSIVPANIALIEGAK 260
Query: 266 NSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPL----AKSHPLYATQQFLFSQPTI--D 319
N+ + FI F LS GQ L K+ + P++P K P Y + + + + D
Sbjct: 261 NTEEGKKFIAFTLSQAGQELLLEPKISRLPVLPYKDMQGKIPPGYPNPEEIAKRSKVHFD 320
Query: 320 YQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHP---------LPELREIL 370
L R +V+ +++ I RL ++Q K +Y+ E + G L + R++
Sbjct: 321 ADLSQTRYYIVQSLYDQTISFRLKELQAATKAIYEAEAKLGKRAAEGKPAELLAQARKLA 380
Query: 371 TALPITEKQATDENYLETFKANE 393
A + K D +L+ F N+
Sbjct: 381 WAPVVDGKAVADPAFLKLFAGNK 403
>gi|33600439|ref|NP_887999.1| putative regulatory lipoprotein [Bordetella bronchiseptica RB50]
gi|33568038|emb|CAE31951.1| putative regulatory lipoprotein [Bordetella bronchiseptica RB50]
Length = 440
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 19/283 (6%)
Query: 126 SLSGCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQG 185
+L+G GI N ++ ++ P +W L++P+ G V +++PSRS T H+ +E +LQ +G
Sbjct: 125 ALAGYGIIYNTRYIKANKLPAPVEWKDLLAPHWFGHVGITAPSRSGTMHLTVETILQGEG 184
Query: 186 WQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIF 245
W GW + ++ N ++ RSFGV D V G AG ID + L + Y+ P + F
Sbjct: 185 WNDGWGTLLRMSGNASAVTERSFGVPDGVNNGQFGAGPVID-FFGLSSKYSKFP---VDF 240
Query: 246 KYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLA----K 301
Y + P IA+ + N+ + FI F LS GQ L K+ + P++P A K
Sbjct: 241 VYPSETAIVPANIALIEGAKNTEEGKKFIAFTLSQAGQELLLEPKISRLPVLPYAALAGK 300
Query: 302 SHPLYATQQFLFSQPTI--DYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQA 359
P Y + + + D L R VV+ +F+ I RL ++Q K +Y E +
Sbjct: 301 IPPGYPDPAEIAKRSKVHFDADLSQARYYVVQSLFDQTITFRLKELQAATKAIYDAEAKL 360
Query: 360 GHP---------LPELREILTALPITEKQATDENYLETFKANE 393
G L + R++ + ++A D +L+ F N+
Sbjct: 361 GERAGQGKAAELLAQARQLAWTPLVDAQRAADPAFLKLFAGNK 403
>gi|33596675|ref|NP_884318.1| putative regulatory lipoprotein [Bordetella parapertussis 12822]
gi|33573376|emb|CAE37360.1| putative regulatory lipoprotein [Bordetella parapertussis]
Length = 439
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 19/283 (6%)
Query: 126 SLSGCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQG 185
+L+G GI N ++ ++ P +W L++P+ G V +++PSRS T H+ +E +LQ +G
Sbjct: 124 ALAGYGIIYNTRYIKANKLPAPVEWKDLLAPHWFGHVGITAPSRSGTMHLTVETILQGEG 183
Query: 186 WQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIF 245
W GW + ++ N ++ RSFGV D V G AG ID + L + Y+ P + F
Sbjct: 184 WNDGWGTLLRMSGNASAVTERSFGVPDGVNNGQFGAGPVID-FFGLSSKYSKFP---VDF 239
Query: 246 KYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLA----K 301
Y + P IA+ + N+ + FI F LS GQ L K+ + P++P A K
Sbjct: 240 VYPSETAIVPANIALIEGAKNTEEGKKFIAFTLSQAGQELLLEPKISRLPVLPYAALAGK 299
Query: 302 SHPLYATQQFLFSQPTI--DYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQA 359
P Y + + + D L R VV+ +F+ I RL ++Q K +Y E +
Sbjct: 300 IPPGYPDPAEIAKRSKVHFDADLSQARYYVVQSLFDQTITFRLKELQAATKAIYDAEAKL 359
Query: 360 GHP---------LPELREILTALPITEKQATDENYLETFKANE 393
G L + R++ + ++A D +L+ F N+
Sbjct: 360 GERAGQGKAAELLAQARQLAWTPLVDAQRAADPAFLKLFAGNK 402
>gi|33593269|ref|NP_880913.1| putative regulatory lipoprotein [Bordetella pertussis Tohama I]
gi|33563644|emb|CAE42545.1| putative regulatory lipoprotein [Bordetella pertussis Tohama I]
Length = 440
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 19/283 (6%)
Query: 126 SLSGCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQG 185
+L+G GI N ++ ++ P +W L++P+ G V +++PSRS T H+ +E +LQ +G
Sbjct: 125 ALAGYGIIYNTRYIKANKLPAPVEWKDLLAPHWFGHVGITAPSRSGTMHLTVETILQGEG 184
Query: 186 WQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIF 245
W GW + ++ N ++ RSFGV D V G AG ID + L + Y+ P + F
Sbjct: 185 WNDGWGTLLRMSGNASAVTERSFGVPDSVNNGQFGAGPVID-FFGLSSKYSKFP---VDF 240
Query: 246 KYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLA----K 301
Y + P IA+ + N+ + FI F LS GQ L K+ + P++P A K
Sbjct: 241 VYPSETAIVPANIALIEGAKNTEEGKQFIAFTLSQAGQELLLEPKISRLPVLPYAALAGK 300
Query: 302 SHPLYATQQFLFSQPTI--DYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQA 359
P Y + + + D L R VV+ +F+ I RL +Q K +Y E +
Sbjct: 301 IPPGYPDPAEIAKRSKVHFDADLSQARYYVVQSLFDQTITFRLKDLQAATKAIYDAEAKL 360
Query: 360 GHP---------LPELREILTALPITEKQATDENYLETFKANE 393
G L + R++ + ++A D +L+ F N+
Sbjct: 361 GERAGQGKAAELLAQARQLAWTPLVDAERAADPAFLKLFAGNK 403
>gi|91776342|ref|YP_546098.1| putative regulatory lipoprotein [Methylobacillus flagellatus KT]
gi|91710329|gb|ABE50257.1| putative regulatory lipoprotein [Methylobacillus flagellatus KT]
Length = 419
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 105/399 (26%), Positives = 174/399 (43%), Gaps = 29/399 (7%)
Query: 17 VIALFCLGR---AYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFD 73
++ L C + A ++V+ T++ E +S +E+Q + +L R S
Sbjct: 19 ILWLMCFSQWSLADPTKVVVMTSYPQEVVSQFEAAFEQQYPQYKLEVLWRQSRDAMAYIQ 78
Query: 74 DEKNDNIDLVLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVP--EILQKTTVAFSLSGCG 131
D + +D+ S + F L++ Q L V + + +A ++G G
Sbjct: 79 DTSH-RVDVYWSPAQRNFAQLEKMQAFQPLNIDLDGLPAAVNGFALREGNHIATEIAGYG 137
Query: 132 IFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWA 191
I SN L +A + P W+ L P G + + PS+ +I+ LLQ GWQ GW
Sbjct: 138 IVSNPQALASAGLAAPRSWTDLADPAFNGKIALPVPSKVGYAPPLIDILLQGYGWQDGWN 197
Query: 192 LIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNF 251
L+ + AN ++S + V D V +G AG+TID T + + L F Y
Sbjct: 198 LLQAIAANAELVTSGATFVSDDVASGRLLAGLTID----FFTASAIANGAPLQFVYPELT 253
Query: 252 PVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSHPLYATQQF 311
SP +AI N+ N A AF F+LS+ GQ L+H + K P+ P +YA +
Sbjct: 254 GYSPAHLAILKNAGNPAGAQAFSRFVLSEKGQKLLFHPDIRKLPVRP-----SVYADKPA 308
Query: 312 LFSQP-------TIDYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHP-- 362
+ P D + L RQ+++ +F+ I A +Q + + +Q G
Sbjct: 309 DYFNPFENNPVFVYDTRRGLARQDIINALFDAIITRNHASLQHALSAIREASRQLGADAL 368
Query: 363 -LPELREILTALPITEKQATDENYLETFKANEALLHWQH 400
+ + R++L LPI E A L+ +A+ HW+H
Sbjct: 369 NVVKARQLLNTLPIDEAGAESITSLDPVEAD----HWRH 403
>gi|69934920|ref|ZP_00629951.1| putative regulatory lipoprotein [Paracoccus denitrificans PD1222]
gi|119387378|ref|YP_918412.1| putative regulatory lipoprotein [Paracoccus denitrificans PD1222]
gi|119377953|gb|ABL72716.1| putative regulatory lipoprotein [Paracoccus denitrificans PD1222]
Length = 395
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 112/396 (28%), Positives = 167/396 (42%), Gaps = 53/396 (13%)
Query: 12 LLVVPVIALFCLGRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKL 71
LL PV A EL I T++ + + ++ + + IR+LN+ +++
Sbjct: 23 LLAAPVSA---------EELRIITSYQADVVDPMLESFGRSRPDIRIRVLNKNTHAAVDE 73
Query: 72 FDDEKNDNIDLVLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLSGCG 131
+ DL +S+P F L + RLA L D F+ S G
Sbjct: 74 VLAGNDRGFDLFWASAPEAFVVLDKAGRLADLGDG--------------PYADFAWSAVG 119
Query: 132 IFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWA 191
+ VP DW+ L+ P + MS P RS T H ++E +LQ +GWQ GWA
Sbjct: 120 WTWRAP----RDGPVPQDWNDLLDPAFTQGIAMSHPMRSGTMHSLLETILQDRGWQAGWA 175
Query: 192 LIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNF 251
I ++ + TIS+RSFGV++ V+ G A G+TID A L+F+Y
Sbjct: 176 WILELAGQLNTISARSFGVLEGVERGDFAIGLTIDFLAL--------ARDGLVFRYGRPV 227
Query: 252 PVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIP-----LAKSHPLY 306
+ P IA T A FI F+LS GQ L + + P+ P L++S
Sbjct: 228 ILIPARIAALQGGTQPEAAKVFIDFVLSSEGQRILLRPDIRRIPVDPEIRAELSESLDPA 287
Query: 307 ATQQFLFSQPTIDYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPEL 366
FS D +L +R VK +FE + L ++ W+ L + +
Sbjct: 288 IRAALNFSWSRYDPELAARRYWQVKQLFEAFVARDLLLRRDLWRRLRALDDAPPTERARI 347
Query: 367 REILTALPITEKQA----TDENYLETFKANEALLHW 398
R +LT +P+TE QA TD E LL W
Sbjct: 348 RRLLTWMPLTEHQARSVPTDR---------ETLLEW 374
>gi|67153593|ref|ZP_00415338.1| putative regulatory lipoprotein [Azotobacter vinelandii AvOP]
gi|67087726|gb|EAM07192.1| putative regulatory lipoprotein [Azotobacter vinelandii AvOP]
Length = 433
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 99/395 (25%), Positives = 162/395 (41%), Gaps = 32/395 (8%)
Query: 26 AYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLS 85
A EL + T++ +S+ +E+ + +L R N +D+ +
Sbjct: 30 AAPRELTVLTSYPEALMSHFEDAFERAHPDIRLNLLWRAPNDALGYLSQPDQGGVDVYWA 89
Query: 86 SSPMLFYHLQEKQRL-------AALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVAL 138
+SP F L++ LP++ + P+ + +A L+G G +
Sbjct: 90 ASPRTFESLRQAGAWRPIGIDRTGLPERVGTTRLSAPD---GSYLATELAGYGFALDRRA 146
Query: 139 LENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMA 198
L V P DWS L P L G + + PS +M++ +LQ GW++GWAL +++
Sbjct: 147 LAELGVAPPADWSDLADPRLAGRIALPVPSEVGFAPVMVDIVLQAYGWERGWALWNEIAG 206
Query: 199 NVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFI 258
+ S V D+V A G++ID + + + L F Y + ++P +
Sbjct: 207 LSYLVHRGSTFVSDEVTGQRAAVGLSIDFFVT----GAIAGGAPLEFAYPRHGGLNPAHV 262
Query: 259 AITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGK-------YPIIPLAKSHPLYATQQF 311
AIT S A F+ FLLS+ GQ L H + + YP +P P A
Sbjct: 263 AITAGSKQVEAAQTFVAFLLSESGQRLLAHPDIHRLPVRESVYPQLPAGYHDPFRAAAAG 322
Query: 312 LFSQPTIDYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILT 371
+ D L R VV +FE +I + + W ++Q+E + G L +RE L
Sbjct: 323 GYD---YDNDLGRARLGVVSALFEQMLIRQHEEQHALWTAIHQREARDGQRLTAIREQLC 379
Query: 372 ALPITEKQATDENYLETFK--------ANEALLHW 398
I EK+A D +F+ ANE W
Sbjct: 380 QPLIGEKEAGDPQLQASFRRVEGDRTAANEIEARW 414
>gi|119900124|ref|YP_935337.1| putative regulatory lipoprotein [Azoarcus sp. BH72]
gi|119672537|emb|CAL96451.1| putative regulatory lipoprotein [Azoarcus sp. BH72]
Length = 439
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 93/375 (24%), Positives = 161/375 (42%), Gaps = 27/375 (7%)
Query: 31 LVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSSPML 90
+ + T + E ++ + +E+ +++L R + +D+ S+SP
Sbjct: 40 VTVMTAYPEEVMARVEAAFERAHPEYRLQLLWRMPHDALPYLSQPGQGGVDVYWSASPRT 99
Query: 91 FYHLQEK---QRL----AALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALLENAE 143
F L+ +RL A LPD+ + P+ + T ++G G N L
Sbjct: 100 FGQLKAAGAFRRLEIATAGLPDRIGRTPLADPDGYYRAT---EMAGFGFVLNPGALAALG 156
Query: 144 VDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTI 203
V PTDW L P L G +++ +P+R ++++ +LQ GW +GWAL ++ +
Sbjct: 157 VAPPTDWPALADPRLAGRIVLPNPARVGFAPVLVDIVLQAYGWTRGWALWSEIAGLANWV 216
Query: 204 SSRSFGVVDKVQAGLGAAGITIDNY-ANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITT 262
V D+V AG A G++ID + A+ + + + L F Y ++P +AIT
Sbjct: 217 GRGGTSVSDEVVAGRAALGVSIDFFVASAMAN-----GAPLRFVYPARGGINPAHVAITA 271
Query: 263 NSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKS-------HPLYATQQFLFSQ 315
++N A AF F+LS GQ L H + K P+ P A P A +
Sbjct: 272 ATSNPAGARAFAAFVLSAEGQRILTHPDIRKLPVRPAAYEGLPADYPRPFEAAAHGAYD- 330
Query: 316 PTIDYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLPELREILTALPI 375
D +R VV +FE + Q W+ ++ E AG + R +L+ +P+
Sbjct: 331 --YDNDAGRERLAVVAALFEQSFVVGHEQRAALWRRVHAAE-AAGREVGAARRLLSTVPL 387
Query: 376 TEKQATDENYLETFK 390
E +A+ F+
Sbjct: 388 GEAEASSPALTAMFR 402
>gi|116750914|ref|YP_847601.1| extracellular solute-binding protein, family 1 [Syntrophobacter
fumaroxidans MPOB]
gi|116699978|gb|ABK19166.1| extracellular solute-binding protein, family 1 [Syntrophobacter
fumaroxidans MPOB]
Length = 375
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 12/169 (7%)
Query: 131 GIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGW 190
GI LL+ V++ DW L++P L+G + +P RS ++H IE +LQ GW +GW
Sbjct: 147 GIIYQPKLLKRLGVEI-KDWDDLLNPKLKGQIAQCTPDRSSSSHATIEVILQTHGWDKGW 205
Query: 191 ALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNY---ANLLTHYNVDPHSALIFKY 247
A + ++ AN G ++RS V V G A G + +Y A +L Y+V ++ Y
Sbjct: 206 AWLTRLAANTGIFTARSRDVPSVVAKGEFAVGFGVPSYMAFAEVLGGYDV------MYVY 259
Query: 248 FPNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPI 296
N ++P +A+ + + R A AFI FL+S+ GQ + S++G YPI
Sbjct: 260 PTNAYLTPEPMAVLKGAPHPRAAHAFIEFLVSEEGQKLV--SQLGVYPI 306
>gi|104781461|ref|YP_607959.1| ABC transporter, periplasmic binding protein [Pseudomonas
entomophila L48]
gi|95110448|emb|CAK15156.1| putative ABC transporter, periplasmic binding protein [Pseudomonas]
Length = 397
Score = 96.3 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 19/275 (6%)
Query: 124 AFSLSGCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQK 183
A L+G G +N LL +V P DW L+ P L+G + + P+R +M++ +L
Sbjct: 87 ATELAGFGFATNPQLLRRLDVPAPRDWPDLLDPRLRGHIALPDPARVGFAPVMLDIVLDA 146
Query: 184 QGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSAL 243
GW++GWAL ++ +S V D+V +G A G++ID + D +
Sbjct: 147 YGWERGWALWSELAGQSRLVSLGGTLVSDEVASGRAAVGLSIDFFVASAIANGDD----V 202
Query: 244 IFKYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPI------- 296
F Y + ++P IAIT +++ A AF+ F+LS+ GQ L ++ K P
Sbjct: 203 GFVYPAHGGLNPAHIAITAQASHPEGARAFVGFVLSEEGQKLLADPEIRKLPARPSVYAQ 262
Query: 297 IPLAKSHPLYATQQFLFSQPTIDYQLLLKRQE--VVKLMFEHQIIHRLAQIQENWKILYQ 354
+P P A +Q + Y R+ +V +F + ++ W ++
Sbjct: 263 LPQGYHDPFAAARQGAYR-----YGNDASREHLGLVTSLFSQWLGQSHPRLVALWGRVHA 317
Query: 355 KEQQAGHPLPELREILTALPITEKQATDENYLETF 389
E +GH L +R LT P+ +QA L F
Sbjct: 318 GE-ASGHDLQAVRACLTQPPLDAEQARSPELLALF 351
>gi|152982498|ref|YP_001355360.1| phosphoglycerate transport regulatory protein PgtC
[Janthinobacterium sp. Marseille]
gi|151282575|gb|ABR90985.1| phosphoglycerate transport regulatory protein PgtC
[Janthinobacterium sp. Marseille]
Length = 448
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 82/373 (21%), Positives = 154/373 (41%), Gaps = 29/373 (7%)
Query: 28 SNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSS 87
+ ++V+ T++ E ++ +EK T + +L R S ++D+ + +
Sbjct: 31 AGKVVVMTSYPEEVVARFEAAFEKAHPGTRVEILWRRSGDALSYLRKPNQGDVDVYWTPA 90
Query: 88 PMLFYHLQEKQR-------LAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALLE 140
F L ++ + LP K P +A ++G G N L+
Sbjct: 91 QRNFQILAKEGAFRRPDLDMKGLPAKVGGFPISDPAGFY---LASEIAGYGFAINPQRLQ 147
Query: 141 NAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANV 200
+ ++ P W+ L P + ++ P + I+I+ +LQ GW +GWAL+ + +N
Sbjct: 148 DKKLPQPKQWTDLTGPEWKDEIVFPVPGKVGFAPILIDIILQGYGWDKGWALLQSIGSNA 207
Query: 201 GTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAI 260
+ + D V+ G + G++ID + + L F Y SP + I
Sbjct: 208 RLLGQGGANISDDVRNGQASVGVSID----FFIKSAIANGAPLEFIYPGITGYSPAHVGI 263
Query: 261 TTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSH-------PLYATQQFLF 313
+ N A AF F+LSD GQ L+H + K P+ P + P A + F
Sbjct: 264 MKGAPNPTAARAFATFVLSDEGQKILFHHDIRKLPVRPAVYASKPAGYFDPFEAAKAMPF 323
Query: 314 SQPTIDYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHP-----LPELRE 368
D + L RQ +F+ I + A++++ + + E+ A + + R
Sbjct: 324 ---IFDTERALARQGFNNTLFDVLISNEHARLRQANDKVMRAERAANNAELKAKAAQARG 380
Query: 369 ILTALPITEKQAT 381
+L +P++E +AT
Sbjct: 381 LLDTIPLSEAEAT 393
>gi|134096593|ref|YP_001101668.1| putative regulatory lipoprotein [Herminiimonas arsenicoxydans]
gi|133740496|emb|CAL63547.1| putative regulatory lipoprotein [Herminiimonas arsenicoxydans]
Length = 450
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 78/374 (20%), Positives = 151/374 (40%), Gaps = 32/374 (8%)
Query: 29 NELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSSP 88
+++V+ T++ E +S +EK T + +L R S D+K N+D+ S +
Sbjct: 32 DKVVVMTSYPEEVVSRFEAGFEKTHPGTRVEILWRHSGDARSYLRDQKQQNVDVYWSPAQ 91
Query: 89 MLFYHLQEKQR-------LAALPDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALLEN 141
F L + + LP + P T ++G G N L+
Sbjct: 92 RNFLTLAREGAFRKLDIDMTGLPARVGGFPISDPAGFYAAT---EIAGYGFAFNPQRLKE 148
Query: 142 AEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVG 201
+ P W+ L + ++ P + ++I+ +LQ GW +GW ++ + +N
Sbjct: 149 KGLPQPRQWTELSDQKWKDEIVFPIPGKVGFAPLLIDIILQGYGWDKGWEILQGIGSNAQ 208
Query: 202 TISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAIT 261
+ + D+V +G + G++ID + + + F Y SP +AI
Sbjct: 209 LLGQGGQHISDEVSSGRASVGVSID----FFIKAAIANGAPIQFAYPGITGYSPAHVAIM 264
Query: 262 TNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAKSH-------PLYATQQFLFS 314
N+ + + A AF ++LS GQ L+H + K P+ P ++ P A F
Sbjct: 265 KNAPHLKNARAFAAYVLSAEGQKILFHPDIRKLPVRPAVYANKPAGYFDPFKAASAMPF- 323
Query: 315 QPTIDYQLLLKRQEVVKLMFEHQIIHRLAQIQENWKILYQKEQQAGHPLP--------EL 366
+ + L+RQ + +F+ I + ++ ++Q E A +
Sbjct: 324 --VFNTERALERQGLNNTLFDILITNEQTALRRVLDKIHQAENLANADSDSRLKARTYQA 381
Query: 367 REILTALPITEKQA 380
R + + +P++E QA
Sbjct: 382 RVLASTVPLSEVQA 395
>gi|119720390|ref|YP_920885.1| extracellular solute-binding protein, family 1 [Thermofilum pendens
Hrk 5]
gi|119525510|gb|ABL78882.1| extracellular solute-binding protein, family 1 [Thermofilum pendens
Hrk 5]
Length = 470
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 13/226 (5%)
Query: 129 GCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQ 188
G G N +LE + P W L+ P + L++M +PSRS +T+I + ++Q +GW Q
Sbjct: 153 GHGFMYNTKVLEKLGLQPPKTWDDLLDPKWKDLIVMCTPSRSSSTYINVGIIIQNRGWDQ 212
Query: 189 GWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYF 248
GWA ++ ANVG RS VVD V G A G A ++ YN P S ++
Sbjct: 213 GWAFWRRLAANVGAFVQRSADVVDLVSKGEYAVGFAYSQGA-IINRYNGYPVS--MYMDP 269
Query: 249 PNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPLAK-SHPLYA 307
F VS +++ + + A AF+ + ++ Q + G P++P K + P +
Sbjct: 270 TGFIVSG--VSLLKGAPHPNIAKAFLDWWYTEDAQQAALSA--GGIPVLPTVKIAGPPNS 325
Query: 308 T----QQFLFSQPTI-DYQLLLKRQEVVKLMFEHQIIHRLAQIQEN 348
T +++L + TI DY + F + +++I +N
Sbjct: 326 TAAILREYLGGKDTIYDYLKTFTNVKFYNFTFAEAMYTNISKIFDN 371
>gi|145591389|ref|YP_001153391.1| extracellular solute-binding protein, family 1 [Pyrobaculum
arsenaticum DSM 13514]
gi|145283157|gb|ABP50739.1| extracellular solute-binding protein, family 1 [Pyrobaculum
arsenaticum DSM 13514]
Length = 516
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 72/245 (29%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 123 VAFSLSGCGIFSNVALLENAEVDVPTDWSGLISPN-----LQGLVI--MSSPSRSDTTHI 175
VA+++S GI N +L A V P W+ L S L+G+ + ++ ++S +
Sbjct: 197 VAWAISSFGITINTKVLRTAGVPEPKTWTDLASLEYGKAILKGMPVTGLAQLTKSTSNTR 256
Query: 176 MIEALLQKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHY 235
+ E +LQ GW QGW +I AN G + S V D V AG AG TID Y
Sbjct: 257 IAEIILQAYGWDQGWVVITLTAAN-GKVYGGSEAVRDAVIAGEIGAGWTIDFYGYTAQLQ 315
Query: 236 NVDPHSALIFKYF--PNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGK 293
N D KY P+ V+ IA+ N+ A AF+ +++++ GQ ++ K+ +
Sbjct: 316 NPDT------KYVIPPDTSVNGDPIAVVKNTKCRAAAEAFVAWVITE-GQVVVFDPKINR 368
Query: 294 YPIIPLAKSHP-------LYATQQFLFSQPTIDYQ--LLLKRQEVVKLMFEHQIIHRLAQ 344
P+ P A + P L + LF TI++ L L + VV F+ I +
Sbjct: 369 MPVNPNAFNTPQGKQRPDLKSVYDQLFQLKTIEFNDTLALAVENVVMYYFDAAITDNIDI 428
Query: 345 IQENW 349
+Q+ W
Sbjct: 429 LQQTW 433
>gi|14601589|ref|NP_148129.1| ABC transporter, substrate binding protein [Aeropyrum pernix K1]
gi|5105416|dbj|BAA80729.1| ABC transporter, substrate binding protein [Aeropyrum pernix K1]
Length = 517
Score = 79.0 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 84/316 (26%), Positives = 138/316 (43%), Gaps = 47/316 (14%)
Query: 75 EKNDNIDLVLSSSPMLFYHLQEKQRLAAL-PDKFSQGKKFVPEI-----LQKTT------ 122
E +ID+ P LF L + LA L D + +P++ +++T
Sbjct: 131 ESRGDIDVAWGGGPTLFDQLYQAGYLAPLTSDTALEAAAQIPDLFAGAPMKRTDSEGRIY 190
Query: 123 -VAFSLSGCGIFSNVALLENAEVDVPTDWSGLISPN------LQG--LVIMSSPSRSDTT 173
VA S++ G N +L + VP W+ L SP L+G ++ ++ P+RS +
Sbjct: 191 WVAASVASFGFTVNHDVLNQYNLPVPKRWADLASPVYAEPLVLEGREVIAIADPTRSTSN 250
Query: 174 HIMIEALLQKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNY----- 228
M E +LQ GW++GW ++ + AN + S V D V G A GITID Y
Sbjct: 251 TRMYEIILQAYGWEEGWRVLTGMAAN-ALVEGGSAEVRDDVIQGRVAIGITIDFYGYTAM 309
Query: 229 -ANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLY 287
AN T Y + P I P IA+ T S + A AFI ++L++ GQ +
Sbjct: 310 KANPATEY-IIPEGETIINGDP--------IALLTTSKHPEAAQAFIAWVLTE-GQKIWF 359
Query: 288 HSKMGKYPIIPLAKSHP-------LYATQQFLFSQPTIDY--QLLLKRQEVVKLMFEHQI 338
+ + P P A P L A L + ++++ + LK + ++L F+ +
Sbjct: 360 REDINRLPSNPKAFELPEGRERQDLKAVYDKLSTAKSMEFSDEEALKIESAMQLYFKATL 419
Query: 339 IHRLAQIQENWKILYQ 354
+ ++E W + Q
Sbjct: 420 VDLNGILKEVWTTMVQ 435
>gi|18311683|ref|NP_558350.1| extracellular solute binding protein, conjectural [Pyrobaculum
aerophilum str. IM2]
gi|18159082|gb|AAL62532.1| extracellular solute binding protein, conjectural [Pyrobaculum
aerophilum str. IM2]
Length = 511
Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 26/250 (10%)
Query: 123 VAFSLSGCGIFSNVALLENAEVDVPTDWSGLISPN-----LQGLVI--MSSPSRSDTTHI 175
VA+++S GI N +L+ + P W+ L S N LQG + ++ ++S +
Sbjct: 193 VAWAVSSFGITINTKVLKTVGLPEPKSWADLASLNYGKGVLQGFPVAGLARLTQSTSNTR 252
Query: 176 MIEALLQKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHY 235
+ E +LQ GW QGW +I AN G I S V D V AG AG TID Y
Sbjct: 253 IAEIILQAYGWDQGWVVITLTAAN-GKIFGGSEAVRDAVIAGDIGAGWTIDFYGYTAQLQ 311
Query: 236 NVDPHSALIFKYF--PNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGK 293
N D KY P+ V+ IA+ N+ A AF+ ++++ GQ ++ K+ +
Sbjct: 312 NPDT------KYIIPPDTSVNGDPIAVVKNTKCRAAAEAFVAWVITQ-GQVVVFDPKINR 364
Query: 294 YPIIPLAKSHP-------LYATQQFLFSQPTIDYQ--LLLKRQEVVKLMFEHQIIHRLAQ 344
P+ P A + P L A L + TI++ L L + VV F+ I
Sbjct: 365 MPVNPNAFNTPQGQKRPDLKAIYDQLLTLKTINFNDTLALSVENVVMYYFDAAITDNADI 424
Query: 345 IQENWKILYQ 354
+Q+ W L +
Sbjct: 425 LQQAWAKLLE 434
>gi|150400767|ref|YP_001324533.1| extracellular solute-binding protein family 1 [Methanococcus
aeolicus Nankai-3]
gi|150013470|gb|ABR55921.1| extracellular solute-binding protein family 1 [Methanococcus
aeolicus Nankai-3]
Length = 344
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 71/284 (25%), Positives = 119/284 (41%), Gaps = 32/284 (11%)
Query: 28 SNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSS 87
+ E VI + L + E+EK + + +L++L ++ N + D+
Sbjct: 34 TEEKVINIYAAYGGLDTIAEEFEKDTGIKVNYVSMSSGEALSRLMAEKNNPSCDVWFGGG 93
Query: 88 PMLFYHLQEKQRLAAL--PDKFSQGKKFVPEILQKTTVAFSLSGCGIFSNVALLENAEVD 145
F + ++ L + P+ KFV E T V SL G+ N L+++ +
Sbjct: 94 IDAFIKAKNEKLLTSYESPNAKYIDSKFVDEEHYWTGV--SLVTIGVLENTQLIKDKNLP 151
Query: 146 VPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISS 205
P W LI P +G +I S+P+ S T + I +LQ +G +GW + + N ++
Sbjct: 152 EPKTWDDLIKPEYKGELIASNPTISGTAYFTICGILQMKGKDEGWIYLDKFYGNTPFLTK 211
Query: 206 RSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVS----------P 255
R G KV +G A G+ DPHS I P+ P+ P
Sbjct: 212 RGSGPSKKVISGEYAYGVA------------PDPHSKKIKN--PDLPIKAIYLDKVVWWP 257
Query: 256 TFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPL 299
+ +AI +S + A F+ + LS+ GQ L M P +P+
Sbjct: 258 SPVAIIKDSKHPNNAKTFVDWALSERGQKIL----MSASPRVPV 297
>gi|119871595|ref|YP_929602.1| extracellular solute-binding protein, family 1 [Pyrobaculum
islandicum DSM 4184]
gi|119673003|gb|ABL87259.1| extracellular solute-binding protein, family 1 [Pyrobaculum
islandicum DSM 4184]
Length = 498
Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 111/250 (44%), Gaps = 26/250 (10%)
Query: 123 VAFSLSGCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSP-------SRSDTTHI 175
VA+++S GI N +L++ + P W+ L S V+ SP ++S +
Sbjct: 179 VAWAVSSFGITINTKVLKSLGLPEPKSWTDLASFEYGKAVLRGSPAAGLSQLTKSTSNTR 238
Query: 176 MIEALLQKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHY 235
+ E +LQ GW +GW +I AN G I S V D V AG AG TID Y
Sbjct: 239 IAEIILQAYGWDEGWRVITLTAAN-GKIYGGSEAVRDAVIAGDIGAGWTIDFYGYTAQLQ 297
Query: 236 NVDPHSALIFKYF--PNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGK 293
N D KY P+ V+ IA+ + A AF+ ++++ GQ ++ K+ +
Sbjct: 298 NPDT------KYVVPPDTSVNGDPIAVVKGTKCREAAEAFVAWVITQ-GQVVVFDPKVNR 350
Query: 294 YPIIPLAKSHP-------LYATQQFLFSQPTIDYQ--LLLKRQEVVKLMFEHQIIHRLAQ 344
P+ P A + P L A ++ + TI++ L L + VV F+ I
Sbjct: 351 MPVNPNAFNTPEGRKRADLKAVYDYMLNLKTINFNDTLALATENVVMYYFDAAITDNAQL 410
Query: 345 IQENWKILYQ 354
+Q+ W L +
Sbjct: 411 LQDVWAKLVK 420
>gi|134046596|ref|YP_001098081.1| extracellular solute-binding protein, family 1 [Methanococcus
maripaludis C5]
gi|132664221|gb|ABO35867.1| extracellular solute-binding protein, family 1 [Methanococcus
maripaludis C5]
Length = 350
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 12/260 (4%)
Query: 42 LSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSSPMLFYHLQEKQRLA 101
L + E+EK + + +L++L ++ N + D+ L F Q L
Sbjct: 53 LDLIAEEFEKDTGIKMEYVSLSSGEALSRLKAEQSNPSADVWLGGGIDAFISAQNDGLLE 112
Query: 102 ALPDKFSQGKKFVPEILQKTT--VAFSLSGCGIFSNVALLENAEVDVPTDWSGLISPNLQ 159
A K ++ P +++ + SL GI N L+ + P W LI+ +
Sbjct: 113 AY--KSPNAEEIDPLFVEENGYWIGVSLVTIGILENTDLMTEKGLPEPETWDDLITEDYS 170
Query: 160 GLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLG 219
G +I S+P+ S T + I +LQ G ++GW + + N ++ R G + V AG
Sbjct: 171 GELIASNPTVSGTAYFTICGILQMNGEEEGWNYLDKFYQNTPFLTKRGSGPGNLVTAGEY 230
Query: 220 AAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLS 279
A G+ D + L+ + + S + N P+ ++I + + A F+ + LS
Sbjct: 231 AYGVAPDPHTTLIANSELPVKSV----FLDNVIWWPSPVSIVNGAKHPENAKIFVDWCLS 286
Query: 280 DPGQSTLYHSKMGKYPIIPL 299
GQ L M P +P+
Sbjct: 287 KEGQEVL----MQASPRVPV 302
>gi|45357671|ref|NP_987228.1| ABC-type Iron(III)-binding periplasmic protein precursor
[Methanococcus maripaludis S2]
gi|45047231|emb|CAF29664.1| ABC-type Iron(III)-binding periplasmic protein precursor
[Methanococcus maripaludis S2]
Length = 343
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 16/263 (6%)
Query: 41 SLSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSSPMLFYHLQEKQRL 100
SL + E+EK + + +L++L ++ N + D+ L F Q+ L
Sbjct: 45 SLDLIADEFEKDTGIKMEYVSLSSGEALSRLKAEQSNPSADVWLGGGIDAFISAQQDGLL 104
Query: 101 AALPDKFSQGKKFVPEILQKTT--VAFSLSGCGIFSNVALLENAEVDVPTDWSGLISPNL 158
A K K P +++ SL GI N LL + P W LI+ +
Sbjct: 105 EAY--KSPNAKDIDPLFVEEDGYWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDY 162
Query: 159 QGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGL 218
+G +I S+P+ S T + I +LQ G +GW + + N ++ R G + V AG
Sbjct: 163 KGELIASNPTVSGTAYFTICGILQMYGEDEGWNYLDKFYQNTPFLTKRGSGPGNLVTAGE 222
Query: 219 GAAGITIDNYANLLTHYNVDPHSALIFK--YFPNFPVSPTFIAITTNSTNSRQASAFIHF 276
A G+ D + ++ + S + K ++P+ PVS I + + + A F+ +
Sbjct: 223 YAYGVAPDPHTTVIADSELPVKSVFLNKVIWWPS-PVS-----IVSGAKHPENAKIFVDW 276
Query: 277 LLSDPGQSTLYHSKMGKYPIIPL 299
LS GQ L M P +P+
Sbjct: 277 CLSKEGQEVL----MQASPRVPV 295
>gi|150403030|ref|YP_001330324.1| extracellular solute-binding protein family 1 [Methanococcus
maripaludis C7]
gi|150034060|gb|ABR66173.1| extracellular solute-binding protein family 1 [Methanococcus
maripaludis C7]
Length = 343
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 12/260 (4%)
Query: 42 LSYLITEWEKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSSSPMLFYHLQEKQRLA 101
L + E+EK + + +L++L ++ N + D+ L F Q L
Sbjct: 46 LDLIAEEFEKDTGIKMEYVSLSSGEALSRLKAEQSNPSADVWLGGGIDAFISAQNDGLLE 105
Query: 102 ALPDKFSQGKKFVPEILQKTT--VAFSLSGCGIFSNVALLENAEVDVPTDWSGLISPNLQ 159
A K K+ P +++ SL GI N L+ + P W LI+
Sbjct: 106 AY--KSPNAKEIDPLFVEENGYWTGVSLVTIGILENTDLMSEKGLPEPETWDDLITEEYS 163
Query: 160 GLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLG 219
G +I S+P+ S T + I +LQ G ++GW + + N ++ R G + V AG
Sbjct: 164 GELIASNPTVSGTAYFTICGILQMYGEEEGWNYLDKFYQNTPFLTKRGSGPGNLVTAGEY 223
Query: 220 AAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLS 279
A G+ D + L+ + S + N P+ ++I + + + A F+ + LS
Sbjct: 224 AYGVAPDPHTTLIADSELPVKSV----FLDNVIWWPSPVSIVSGAKHPENARIFVDWCLS 279
Query: 280 DPGQSTLYHSKMGKYPIIPL 299
GQ L M P +P+
Sbjct: 280 KEGQEVL----MQASPRVPV 295
>gi|126465064|ref|YP_001040173.1| extracellular solute-binding protein, family 1 [Staphylothermus
marinus F1]
gi|126013887|gb|ABN69265.1| extracellular solute-binding protein, family 1 [Staphylothermus
marinus F1]
Length = 592
Score = 68.2 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 68/250 (27%), Positives = 99/250 (39%), Gaps = 40/250 (16%)
Query: 80 IDLVLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTT----------------- 122
ID+ P LF ++ EK + L + V +QK
Sbjct: 116 IDIAWGGGPTLFNYIDEKGYIEPLDNTTHPEYNAVLYEMQKIPERIAGAPTYKVGDDGYV 175
Query: 123 --VAFSLSGCGIFSNVALLENAEVDVPTDWSGLISPNLQG------LVIMSSPSRSDTTH 174
+ ++S G N ++ N V VP W L P L ++ P++S +
Sbjct: 176 HWIGAAISSFGFTVNHDVINNYNVPVPKKWIDLTDPVYAKYLPDTPLTGIADPTKSTSNT 235
Query: 175 IMIEALLQKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTH 234
M E +LQ GW +GW ++ + AN S S GV D V G A GITID Y H
Sbjct: 236 RMYEIILQAYGWDEGWKVLTLMAANAKIYDSSS-GVRDAVIRGDIAVGITIDFYGYTAMH 294
Query: 235 YN-----VDPHSALIFKYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLSD-PGQSTLYH 288
N + P + I P IAI N+ QA+AF+ ++LS+ GQ
Sbjct: 295 QNPACEYIIPENESIVNADP--------IAILKNTRYPVQAAAFVAWVLSEYGGQQVWLD 346
Query: 289 SKMGKYPIIP 298
+ + PI P
Sbjct: 347 PDINRLPINP 356
>gi|126458873|ref|YP_001055151.1| extracellular solute-binding protein, family 1 [Pyrobaculum
calidifontis JCM 11548]
gi|126248594|gb|ABO07685.1| extracellular solute-binding protein, family 1 [Pyrobaculum
calidifontis JCM 11548]
Length = 511
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 78/299 (26%), Positives = 130/299 (43%), Gaps = 36/299 (12%)
Query: 71 LFDDEKNDNIDLVLSSSPMLFYHLQEKQRLAALP--DKFSQGKKFVPEILQKTTVAFSLS 128
LFD +D + L L + Q + +A +P S GK + VA+++S
Sbjct: 147 LFDSLYSDGLLLPLEGPEVKAAMAQIPKTIAGMPMMRVGSDGKVY--------WVAWAVS 198
Query: 129 GCGIFSNVALLENAEVDVPTDWSGLIS-----PNLQGLVI--MSSPSRSDTTHIMIEALL 181
GI N +L + + P W+ L S +G+ + ++S ++S + + E +L
Sbjct: 199 SFGITINKKVLGSYGLSEPKSWADLASFEYGRAAARGVPVTGLASLTQSTSNTRIAEIIL 258
Query: 182 QKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHS 241
Q GW++GW +I AN G I S V D V AG AG TID Y N D
Sbjct: 259 QAYGWEEGWRIIVLTAAN-GKIYGGSEAVRDGVIAGEIGAGWTIDFYGYTAQLQNPDT-- 315
Query: 242 ALIFKYF--PNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPL 299
KY P+ V+ IA+ + A AF+ ++++ GQ ++ K+ + P+ P
Sbjct: 316 ----KYVIPPDTSVNGDPIAVVKGTKCREAAEAFVAWVITG-GQVIVFDPKINRMPVNPN 370
Query: 300 AKSHP-------LYATQQFLFSQPTIDYQ--LLLKRQEVVKLMFEHQIIHRLAQIQENW 349
A + P L +L + TI++ L + + VV F+ + +Q+ W
Sbjct: 371 AFNTPEGQRRPDLKQVYDYLLTLKTINFNDTLAISVENVVMYYFDAAVKDNQDVLQQAW 429
>gi|83594529|ref|YP_428281.1| extracellular solute-binding protein, family 1 [Rhodospirillum
rubrum ATCC 11170]
gi|83577443|gb|ABC23994.1| extracellular solute-binding protein, family 1 [Rhodospirillum
rubrum ATCC 11170]
Length = 338
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 86/345 (24%), Positives = 147/345 (42%), Gaps = 42/345 (12%)
Query: 13 LVVPVIALFCLG------------RAYSNELVIGTTFSPESLSYLITEWEK-QPNATSIR 59
L++ + A+F LG +L++ T+ + L+ +I+ + + P T
Sbjct: 7 LLIAIAAVFGLGLASAQAQSPAPAATTKTDLMLYTSQPQDMLNAMISVFNRSHPEITVHF 66
Query: 60 MLNRTSNSLNKLFDD--EKNDNIDLVLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEI 117
+ T+ +NKL + DL+L ++ + ++ K RL A P+ + G + P I
Sbjct: 67 FRSGTTEVMNKLEAEYAAGAPQPDLLLVANALDLSQMKAKDRLLAYPEAPTAG--YDPAI 124
Query: 118 LQKTTVAFSLS--GCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHI 175
F+ GI N L++ D P W L+ +G VIM SP S +
Sbjct: 125 HDPDHRYFATKRITTGIAYNTKLVQ----DPPKSWKDLLDRRFKGQVIMPSPLYSGAAAL 180
Query: 176 MIEALLQKQGWQQGWALIHQVMANVGTISSRSFG-VVDKVQAGLGAAGITIDNYANLLTH 234
+ + + GWA ++ +A G ++ R G V++ V +G A GI +D A
Sbjct: 181 HVGTMTASPAF--GWAY-YEALAENGALAGRGNGSVMEAVASGQSAVGIIVDFMA----- 232
Query: 235 YNVDPHSALIFKYFPNFPVSPTF--IAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMG 292
N + + FP+ VS +AI + N A FI +LLS GQ+ + ++ G
Sbjct: 233 LNAKAKGSPVDFVFPSDGVSVITEPVAILKTARNPAGAKVFIDWLLSAEGQA--FAAEQG 290
Query: 293 KYPIIP---LAKSHPLYATQQFLFSQPTIDYQLLLKRQEVVKLMF 334
P +P K+ P L S +D ++L+K E K F
Sbjct: 291 YLPALPGVAAPKTFPAGFVDPLLIS---VDPEILIKDDEQTKRTF 332
>gi|148379140|ref|YP_001253681.1| iron ABC transporter, solute-binding lipoprotein [Clostridium
botulinum A str. ATCC 3502]
gi|148288624|emb|CAL82705.1| putative iron ABC transporter, solute-binding lipoprotein
[Clostridium botulinum A str. ATCC 3502]
Length = 348
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 127 LSGCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGW 186
L+ G N +L+ + VP +W L+ P + ++MS+P+ S T + ++ ALLQ++G
Sbjct: 138 LTIVGFLVNKDVLKEKNLQVPKNWDDLVKPEYKNEILMSNPAISGTNYAVVNALLQQKGK 197
Query: 187 QQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGIT-IDNYANLLTHYNVDPHSALIF 245
+GW + N+ S R K AG A GIT IDN + + + +I+
Sbjct: 198 DEGWKYFENLNKNISYYSKRGKDPKLKTTAGEVAIGITYIDNS---IVKLEKEKNMQVIY 254
Query: 246 KYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTL 286
P +AI N++N A F +++L Q L
Sbjct: 255 PQ-DGIPWVVEGMAIFKNASNLEGAKIFENWVLKRETQEEL 294
>gi|153932369|ref|YP_001383515.1| ABC transporter, substrate-binding protein [Clostridium botulinum A
str. ATCC 19397]
gi|153935109|ref|YP_001387064.1| ABC transporter, substrate-binding protein [Clostridium botulinum A
str. Hall]
gi|152928413|gb|ABS33913.1| ABC transporter, substrate-binding protein [Clostridium botulinum A
str. ATCC 19397]
gi|152931023|gb|ABS36522.1| ABC transporter, substrate-binding protein [Clostridium botulinum A
str. Hall]
Length = 348
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 127 LSGCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGW 186
L+ G N +L+ + VP +W L+ P + ++MS+P+ S T + ++ ALLQ++G
Sbjct: 138 LTIVGFLVNKDVLKEKNLQVPKNWDDLVKPEYKNEILMSNPAISGTNYAVVNALLQQKGK 197
Query: 187 QQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGIT-IDNYANLLTHYNVDPHSALIF 245
+GW + N+ S R K AG A GIT IDN + + + +I+
Sbjct: 198 DEGWKYFENLNKNISYYSKRGKDPKLKTTAGEVAIGITYIDNS---IVKLEKEKNMQVIY 254
Query: 246 KYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTL 286
P +AI N++N A F +++L Q L
Sbjct: 255 PQ-DGIPWVVEGMAIFKNASNLEGAKIFENWVLKRETQEEL 294
>gi|117617747|ref|YP_856467.1| ABC transporter, periplasmic binding protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117559154|gb|ABK36102.1| ABC transporter, periplasmic binding protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 339
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 51/212 (24%), Positives = 86/212 (40%), Gaps = 23/212 (10%)
Query: 28 SNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLN-KLFDDEKNDNIDLVLSS 86
+ +L + T F PE L L T +E+Q +I+ + ++ + +L ++ D+V
Sbjct: 23 ATDLTVYTAFEPEQLGELKTAFERQHPDINIKWVRDSTGVVTARLLAEKAQPKADVVWGL 82
Query: 87 SPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFSLS-------GCGIFSNVALL 139
+ L ++Q L A + P+ L K F S G F +
Sbjct: 83 AATSLMQLDQQQMLNA----------YAPKGLDKLDSRFRDSKAEPHWIGLDAFFSAICF 132
Query: 140 ENAE-----VDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIH 194
E + PT W+ L P +G VIM +PS S T ++ + LQ G QQGW ++
Sbjct: 133 NKVEAQKQGIPAPTSWADLTKPIYKGKVIMPNPSSSGTGYLSVAGWLQTMGEQQGWQFMN 192
Query: 195 QVMANVGTISSRSFGVVDKVQAGLGAAGITID 226
+ N+ + +G GI+ D
Sbjct: 193 GLHQNIDRYTHSGSAPCKLAASGETVIGISFD 224
>gi|84502540|ref|ZP_01000676.1| probable iron uptake ABC transporter periplasmic solute-binding
protein [Oceanicola batsensis HTCC2597]
gi|84389352|gb|EAQ02149.1| probable iron uptake ABC transporter periplasmic solute-binding
protein [Oceanicola batsensis HTCC2597]
Length = 335
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 64/282 (22%), Positives = 112/282 (39%), Gaps = 28/282 (9%)
Query: 12 LLVVPVIALFCLGRAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLN-K 70
L ++AL A ++E+ + T E ++ + +K T I +L ++ L +
Sbjct: 7 LTAASLVALGLAAPAVADEITVYTALEEEEIAAYVEAAQKAMPDTEINVLRLSTGKLGAR 66
Query: 71 LFDDEKNDNIDLVLSSS------PMLFYHLQ--EKQRLAALPDKF--SQGKKFVPEILQK 120
L + N DL+ + P + L+ + + LP F GK F P
Sbjct: 67 LLAEAGNPQADLIWGWAVSAMMDPQILDMLEPYAAEGVDVLPATFRGEDGKWFAP----- 121
Query: 121 TTVAFSLSGCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEAL 180
+ + + C N A LE + +P+ W L P +G ++M P+ S T ++ + A+
Sbjct: 122 --IGYMGAFC---VNTARLEEKGLPMPSSWEDLEDPAFKGEILMPDPNSSGTGYLHVNAV 176
Query: 181 LQKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPH 240
LQ G + GWA + V N+ +S + G GI++ T
Sbjct: 177 LQSMGEEAGWAQLEAVDPNMAQYTSSGSKPCKSARVGEYTVGISL-----AFTAMQSVEE 231
Query: 241 SALIFKYFPNFPVSPTFIA--ITTNSTNSRQASAFIHFLLSD 280
+ FP V A + +S N A AF+ + +SD
Sbjct: 232 GYPLAMVFPEGGVGYELEASGLMASSDNKEAAKAFLDWTMSD 273
>gi|15603322|ref|NP_246396.1| hypothetical protein PM1457 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721838|gb|AAK03541.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 329
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 79/330 (23%), Positives = 143/330 (43%), Gaps = 22/330 (6%)
Query: 9 FHSLLVVPVIALFCLGRAYSNELVIGTTFSPESL-SYLITEW-EKQPNATSIRMLNRTSN 66
F S L+ +++ G A++NE +I T ESL L T++ EK P+
Sbjct: 5 FSSALIALGLSMTIAGVAHANEKLIVYTSMKESLIGALKTKFNEKHPDIAMDYQSAGAGK 64
Query: 67 SLNKLFDDEKNDNI--DLVLSSSPMLFYHLQEKQRLAA-LPDKFSQGKKFVPEILQKTTV 123
+ K+ ++++ I D++ +S F+ ++ L A + + +P+ +
Sbjct: 65 LMAKIAAEKESGQIMADVIWTSEVPDFFKMKANGMLDAYVSPEVEHIVNPIPD-FDGSFT 123
Query: 124 AFSLSGCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQK 183
L GI N ++ + PT W + +G +++P+ S T ++ + ALL+
Sbjct: 124 PIRLGTLGIAYNTRFVK----EPPTSWDDITGAKYKGAFGIANPALSGTAYMSV-ALLKS 178
Query: 184 QGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSAL 243
GW ++ AN G + S VVD +G A + +D +T+ + + L
Sbjct: 179 TF---GWEFFEKIKANKGKVGKGSGQVVDDTASGDLLASLAVD----YITNDKIKKGAQL 231
Query: 244 IFKYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIP-LAKS 302
Y V P+ AI + N A FI FLLS+ Q + H G P+ +A
Sbjct: 232 KLVYPKEMLVIPSPAAIFKGTKNPAAAKKFIDFLLSEEAQHIIAHE--GTLPVRKGVATL 289
Query: 303 HPLYATQQFLFSQPTIDYQ-LLLKRQEVVK 331
+ + + IDYQ +L +++E+VK
Sbjct: 290 EGMPTVEDAISRAIPIDYQAILTEKEEIVK 319
>gi|124026969|ref|YP_001012289.1| ABC-type Fe3+ transport system, periplasmic component [Hyperthermus
butylicus DSM 5456]
gi|123977663|gb|ABM79944.1| ABC-type Fe3+ transport system, periplasmic component [Hyperthermus
butylicus DSM 5456]
Length = 517
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 75/313 (23%), Positives = 128/313 (40%), Gaps = 42/313 (13%)
Query: 76 KNDNIDLVLSSSPMLFYHLQEKQRLAALPDKFS-QGKKFVPEILQKTT-----------V 123
+ NID+ P LF L +K L L + + + VP+ V
Sbjct: 133 EKQNIDVAWGGGPTLFDLLFKKGLLKPLETQIALEAASQVPDTFAGQPLKRVKDGKVYWV 192
Query: 124 AFSLSGCGIFSNVALLENAEVDVPT--DWSGLISPNLQGLVI---------MSSPSRSDT 172
A +++ G N + + + DV W L S +L GL++ ++ P++S +
Sbjct: 193 AAAIASFGFTINTEVAQQLDYDVSKLKSWRDLASDDL-GLILVQYNTPALAIADPTQSTS 251
Query: 173 THIMIEALLQKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLL 232
+ E +LQ GW +GW ++ + AN I S V D V AG+ GITID Y
Sbjct: 252 NTRIYEIILQTYGWDEGWRILTLMAAN-ARIEQSSGLVRDDVIAGIVMVGITIDFYG--Y 308
Query: 233 THYNVDPHSALIFKYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMG 292
T ++P I V+ IA+T ++ + A AFI ++L++ GQ ++
Sbjct: 309 TAERINPACKYILPEGETI-VNGDPIAVTISTKHPEAAEAFIAWVLTE-GQKIWLSPEIN 366
Query: 293 KYPIIPLAKSHP-----------LYATQQFLFSQPTIDYQLLLKRQEVVKLMFEHQIIHR 341
+ P P P Y Q Q + L L+ + ++ F+ ++
Sbjct: 367 RLPANPKVFETPEGQQRPDLRDAYYRAMQVKVIQ--FNDTLALEIETAMRQYFKATLVDE 424
Query: 342 LAQIQENWKILYQ 354
+Q+ WK L +
Sbjct: 425 HQTLQQAWKRLLE 437
>gi|153941160|ref|YP_001390501.1| ABC transporter, substrate-binding protein [Clostridium botulinum F
str. Langeland]
gi|152937056|gb|ABS42554.1| ABC transporter, substrate-binding protein [Clostridium botulinum F
str. Langeland]
Length = 348
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 5/161 (3%)
Query: 127 LSGCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGW 186
L+ G N +L+ + P +W L+ P + ++MS+P+ S T + ++ ALLQ++G
Sbjct: 138 LTIVGFLVNKDVLKEKNLQAPENWEDLVKPEYKNEILMSNPAVSGTNYAVVNALLQQKGK 197
Query: 187 QQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGIT-IDNYANLLTHYNVDPHSALIF 245
GW + N+ S R K AG A GIT IDN + + + +I+
Sbjct: 198 DAGWKYFENLNKNISYYSKRGKDPKLKTTAGEVAIGITYIDNS---IVKLEKEKNMQVIY 254
Query: 246 KYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTL 286
P +AI N++N A F +++L Q L
Sbjct: 255 PE-DGIPWVVEGMAIFKNASNLEGAKIFENWVLKKETQEEL 294
>gi|150384732|ref|ZP_01923405.1| ABC-type Fe3+ transport system periplasmic component-like protein
[Victivallis vadensis ATCC BAA-548]
gi|150258878|gb|EDM96132.1| ABC-type Fe3+ transport system periplasmic component-like protein
[Victivallis vadensis ATCC BAA-548]
Length = 531
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 71/170 (41%), Gaps = 23/170 (13%)
Query: 147 PTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQK---------QGWQQGWALIHQVM 197
P W+ L P + ++ PS+S + + E L+Q+ GW+ G L ++
Sbjct: 226 PKRWTDLGEPRFYNTLSLADPSKSGSVNKCFEILIQQCMADANDPVAGWENGLNLTKRIF 285
Query: 198 ANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNV-----DPHSALIFKYFP--- 249
AN ++ + + V G AAG+ ID Y +N PH F Y P
Sbjct: 286 ANARNLTDAAGKIPHDVATGNAAAGVAIDTYGFTEQEWNELQFDGKPH----FFYVPPEG 341
Query: 250 NFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPIIPL 299
+S I + + N + A AF+ F+LS GQ L HS P PL
Sbjct: 342 GTAISADPIQLLRGAPNRKVAEAFLDFVLSKEGQ--LLHSLKPGAPDGPL 389
>gi|153010156|ref|YP_001371370.1| extracellular solute-binding protein family 1 [Ochrobactrum
anthropi ATCC 49188]
gi|151562044|gb|ABS15541.1| extracellular solute-binding protein family 1 [Ochrobactrum
anthropi ATCC 49188]
Length = 320
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 24/226 (10%)
Query: 64 TSNSLNKLFDDEKNDNIDLVLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQ-KTT 122
T + ++ + N +D+++S+S ++ L A S + VP+ L+ +T
Sbjct: 59 TGKVMARIEAEAANPVVDVLISASWDTATDFAKRDWLVAYT---SLNAEKVPDFLKNETA 115
Query: 123 VAFSLSGCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQ 182
VA +S GI N A ++ P +W+ L P + LV + P++S T ++ AL
Sbjct: 116 VAQGVSALGIAWNPA----SKTPKPAEWADLAKPEYKDLVNLPDPAQSGATFELVAALQA 171
Query: 183 KQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSA 242
QQGW L + N T++ + ++ V G AA +Y +L +
Sbjct: 172 ----QQGWDLFRNLHENGATVAGANAEALNPVLQGAKAAVFGAVDYISLAGKAKGESIDV 227
Query: 243 LIFKYFPNFPVSPTFIA-----ITTNSTNSRQASAFIHFLLSDPGQ 283
+ FP S T IA I S N +A FI ++LSD GQ
Sbjct: 228 I-------FPTSGTVIAPRPAMILKWSKNQDEAKQFIDYMLSDEGQ 266
>gi|118592801|ref|ZP_01550190.1| ABC-type Fe3+ transport system, periplasmic component [Stappia
aggregata IAM 12614]
gi|118434571|gb|EAV41223.1| ABC-type Fe3+ transport system, periplasmic component [Stappia
aggregata IAM 12614]
Length = 335
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 31/278 (11%)
Query: 19 ALFCLG---RAYSNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNSLN-KLFDD 74
+LF +G A ++E+ + T E ++ + +K T I +L ++ L +L +
Sbjct: 11 SLFAVGMAATASADEITVYTALEEEEIAAYVEAAKKAMPETEINVLRLSTGKLGARLLAE 70
Query: 75 EKNDNIDLVL--SSSPMLFYHLQE------KQRLAALPDKF--SQGKKFVPEILQKTTVA 124
N D++ + S M+ + E + + LP F GK F P +
Sbjct: 71 AGNPQADVIWGWAVSAMMDPQILEMLEPYAAKGIDVLPASFRGEDGKWFAP-------IG 123
Query: 125 FSLSGCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQ 184
+ + C N A LE + +P W L +P+ +G ++M P+ S T ++ + A+LQ
Sbjct: 124 YMGAFC---VNTARLEEKGLPMPKSWKDLENPDFKGEILMPDPNSSGTGYLHVNAVLQTM 180
Query: 185 GWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALI 244
G + GWA + V N+ +S + G GI++ T +
Sbjct: 181 GEEAGWAQLEAVDPNMAQYTSSGSKPCKSARVGEYTVGISL-----AFTAMQSIEEGYPL 235
Query: 245 FKYFPNFPVSPTFIA--ITTNSTNSRQASAFIHFLLSD 280
FP V A + +S N A AF+ + +SD
Sbjct: 236 AMVFPEEGVGYELEASGLMASSDNKDAAKAFLDWTMSD 273
>gi|42525902|ref|NP_971000.1| ABC transporter, periplasmic substrate-binding protein [Treponema
denticola ATCC 35405]
gi|41815952|gb|AAS10881.1| ABC transporter, periplasmic substrate-binding protein [Treponema
denticola ATCC 35405]
Length = 338
Score = 58.5 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 8/188 (4%)
Query: 103 LPDKFSQGKKFVPEILQKTTVAFSLSG---CGIFSNVALLENAEVDVPTDWSGLISPNLQ 159
L + S K +P + T A+ G G N +L ++ +P W+ L P +
Sbjct: 101 LENYVSPNSKDIPAQYKDTDGAWIAKGITVVGFIGNKDVLAEKKLPMPKTWAELADPKYK 160
Query: 160 GLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLG 219
G VIMS P+ S T + ++ LL G ++GW ++ AN+ + R +K G
Sbjct: 161 GEVIMSDPAISGTNYGAVKGLLDLFGEEKGWDYWKKINANIPFLGKRGKDPQEKTAQGEF 220
Query: 220 AAGIT-IDNYANLLTHYNVDPHSALIFKYFPNFPVSPTFIAITTNSTNSRQASAFIHFLL 278
A GI D A L D + + P P AI + N A AFI F+L
Sbjct: 221 AVGIIPADGKAFKLA----DDKNLTVVYPEDGIPWVPEGTAIFKSCPNLDAAKAFIDFML 276
Query: 279 SDPGQSTL 286
+ Q +
Sbjct: 277 TKEAQEII 284
>gi|114567982|ref|YP_755136.1| ABC-type iron(III)-binding periplasmic protein precursor
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114338917|gb|ABI69765.1| ABC-type iron(III)-binding periplasmic protein precursor
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 364
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 13/157 (8%)
Query: 135 NVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIH 194
N L+ + +P W L+ L+G V M +P+ S T + ++ A+L+ +G GW +
Sbjct: 161 NKDLIAQKGLKMPETWDDLLQSGLKGEVSMPNPASSGTAYNVVTAMLEVKGEDGGWKYLD 220
Query: 195 QVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVS 254
+++ V + R + V G GI N L N PH AL+ +P
Sbjct: 221 KLIDQVPFFTPRGSDPANLVVQGEAIVGINASNGDRDLEANN--PHVALV------YPTD 272
Query: 255 -----PTFIAITTNSTNSRQASAFIHFLLSDPGQSTL 286
P +AI + N A FI ++LS G T+
Sbjct: 273 GTGWWPQPVAIVKGTKNEDAAKVFIDWILSKRGMETI 309
>gi|145953394|ref|ZP_01802402.1| hypothetical protein CdifQ_04003381 [Clostridium difficile
QCD-32g58]
Length = 333
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 3/201 (1%)
Query: 28 SNELVIGTTFSPESLSYLITEW-EKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSS 86
+N+L I E ++Y + + E+ PN +++ +KL ++ N D++
Sbjct: 17 NNKLTIYAALEEEQIAYYMEGFREEYPNIDVEIVMDSHGVIASKLLAEKDNPQADIIWGL 76
Query: 87 SPMLFYHLQEKQRLAAL-PDKFSQ-GKKFVPEILQKTTVAFSLSGCGIFSNVALLENAEV 144
S M L++ L A P + + KKF + V S+ I N L+ +
Sbjct: 77 SAMNMIELKKDGALEAYKPKNYDKVDKKFKDTEDDVSWVGMSVPETAIVVNYKELKKLGI 136
Query: 145 DVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTIS 204
D+P + LI P +GL+ M +P+ S T ++ + L+Q G + + + ++ N+ T +
Sbjct: 137 DIPKSYEDLIKPEYKGLITMPNPASSGTGYLTVSGLIQMMGEKDAYNYMDKLHKNIATYT 196
Query: 205 SRSFGVVDKVQAGLGAAGITI 225
+G GIT+
Sbjct: 197 HSGSKPAKLAGSGEYPIGITL 217
>gi|126700572|ref|YP_001089469.1| ABC transporter, substrate-binding protein [Clostridium difficile
630]
gi|115252009|emb|CAJ69845.1| ABC transporter, substrate-binding protein [Clostridium difficile
630]
Length = 349
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 3/201 (1%)
Query: 28 SNELVIGTTFSPESLSYLITEW-EKQPNATSIRMLNRTSNSLNKLFDDEKNDNIDLVLSS 86
+N+L I E ++Y + + E+ PN +++ +KL ++ N D++
Sbjct: 33 NNKLTIYAALEEEQIAYYMEGFREEYPNIDVEIVMDSHGVIASKLLAEKDNPQADIIWGL 92
Query: 87 SPMLFYHLQEKQRLAAL-PDKFSQ-GKKFVPEILQKTTVAFSLSGCGIFSNVALLENAEV 144
S M L++ L A P + + KKF + V S+ I N L+ +
Sbjct: 93 SAMNMIELKKDGVLEAYKPKNYDKVDKKFKDTEDDVSWVGMSVPETAIVVNYKELKKLGI 152
Query: 145 DVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTIS 204
D+P + LI P +GL+ M +P+ S T ++ + L+Q G + + + ++ N+ T +
Sbjct: 153 DIPKSYEDLIKPEYKGLITMPNPASSGTGYLTVSGLIQMMGEKDAYNYMDKLHKNIATYT 212
Query: 205 SRSFGVVDKVQAGLGAAGITI 225
+G GIT+
Sbjct: 213 HSGSKPAKLAGSGEYPIGITL 233
>gi|90418323|ref|ZP_01226235.1| periplasmic substrate-binding protein, ABC-type iron transporter
[Aurantimonas sp. SI85-9A1]
gi|90337995|gb|EAS51646.1| periplasmic substrate-binding protein, ABC-type iron transporter
[Aurantimonas sp. SI85-9A1]
Length = 327
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 70/265 (26%), Positives = 108/265 (40%), Gaps = 21/265 (7%)
Query: 26 AYSNELVIGTTFSPESLSYLITEWE-KQPNATSIRMLNRTSNSLNKLFDD--EKNDNIDL 82
A S +LV+ T+ E + ++ K P+ + + T+ + KL + N D+
Sbjct: 23 AQSGKLVLYTSQPNEDAQATVDAFKAKHPDVDVEWVRDGTTKIMAKLQAEFAAGNPQPDV 82
Query: 83 VLSSSPMLFYHLQEKQRLAALPDKFSQGKKFVPEILQKTTVAFS--LSGCGIFSNVALLE 140
+L + + L+ RL D + G F + FS L GI +N
Sbjct: 83 LLIADSVTMEGLKRDDRLMPYADADTTG--FADGLFDTDKTYFSTKLITTGIVNNT---- 136
Query: 141 NAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANV 200
AE P+ W L P LQG M SP S + + L Q GW + + N
Sbjct: 137 RAET-TPSSWKDLADPALQGQTTMPSPLTSGAALVHLATLTQNP--DLGWDYVAALAENG 193
Query: 201 GTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSALIFKYFPNFPVSPTF--I 258
T S + GV+ V G A G+ +D + + N P + + FP VS +
Sbjct: 194 ATASGGNGGVLKAVAGGEKAYGVIVD-FLPIREAANGSPVNFV----FPKEGVSAVTEPV 248
Query: 259 AITTNSTNSRQASAFIHFLLSDPGQ 283
AI + N A AF+ F+LS+ GQ
Sbjct: 249 AILKTAQNPEAAKAFVDFVLSEDGQ 273
>gi|30019829|ref|NP_831460.1| ABC transporter substrate-binding protein [Bacillus cereus ATCC
14579]
gi|29895374|gb|AAP08661.1| ABC transporter substrate-binding protein [Bacillus cereus ATCC
14579]
Length = 341
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 67/255 (26%), Positives = 106/255 (41%), Gaps = 25/255 (9%)
Query: 39 PESLSYLITEWEKQPNATSIRMLNRTSNS-LNKLFDDEKNDNIDLV-LSSSPMLFYHLQE 96
P+ L+ I + ++ + M T+ L ++ ++KN +D+V L+S P + +E
Sbjct: 50 PKGLAEKIQKDFQKKTGIKVEMFQGTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKE 109
Query: 97 KQRLAALPDKFSQGKKFVPEILQKTT--VAFSLSGCGIFSNVALLENAEVDVPTDWSGLI 154
Q LA K Q K E +S S GI N ++ A P DWS +
Sbjct: 110 GQTLAYKEAK--QADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTA----PEDWSDIT 163
Query: 155 SPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISSRSFGVVDKV 214
+G V + P+ S + + ++K G Q GW L Q+ N T++ + +D V
Sbjct: 164 KGEWKGKVNLPDPALSGSALDFVTGYVKKNG-QDGWNLFEQLKKNEVTVAGANQEALDPV 222
Query: 215 QAG---LGAAGITIDNYANLLTHYNVD---PHSALIFKYFPNFPVSPTFIAITTNSTNSR 268
G + AG+ Y+ VD P S + +SP I +S N
Sbjct: 223 VTGAKDMVIAGVDYMTYSAKAKGEPVDIVYPKSGTV--------ISPRAAGIMKDSKNVE 274
Query: 269 QASAFIHFLLSDPGQ 283
A FI +LLSD Q
Sbjct: 275 GAKEFIDYLLSDDVQ 289
>gi|57640505|ref|YP_182983.1| ABC-type iron(III) transport system, periplasmic component
[Thermococcus kodakarensis KOD1]
gi|57158829|dbj|BAD84759.1| ABC-type iron(III) transport system, periplasmic component
[Thermococcus kodakarensis KOD1]
Length = 484
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 123 VAFSLSGCGIFSNVALLENAEVDVPTDWSGLISPNLQ---GLVIMSSPSRSDTTHIMIEA 179
+A +LS G N +L + P W + SP+ + ++ P+RS + + +
Sbjct: 146 IAAALSSFGFTVNKEVLNKQGLPFPNKWEDIASPDWARDPQMYGIADPTRSTSNTRIYQI 205
Query: 180 LLQKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDP 239
+LQ GW +GW ++ + AN + S V D V G AAG TID Y T +P
Sbjct: 206 ILQAFGWDEGWRIMTLIAAN-SKVYEASDAVRDAVINGEIAAGNTIDFYG--YTAMKQNP 262
Query: 240 HSALIFKYFPNFPVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTLYHSKMGKYPI 296
+ + + ++ IA+ S + A AFI+++L++ GQ+ ++ + PI
Sbjct: 263 NCVYVIPAGESI-INGDPIALLKYSKHPEAAQAFIYWVLTE-GQAVWMSPEINRLPI 317
>gi|148322987|gb|EDK88237.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter
binding protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 353
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 76/283 (26%), Positives = 124/283 (43%), Gaps = 49/283 (17%)
Query: 28 SNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNS---LNKLFDDEKNDNIDLVL 84
SNELVI + + + ++ +I +EK AT I+++ ++ S L ++ +++N D+
Sbjct: 38 SNELVIYSPNADDEVNKIIPAFEK---ATGIKVILQSMGSGDVLARISAEKENPQADINW 94
Query: 85 SSSPMLFYHLQEKQRLAALPDKF----SQGKKFVPEILQKTTVAFSLSGCGIFSN----- 135
+ M LA PD + S+ +K VP+ + TT G F+N
Sbjct: 95 GAISM--------GVLATTPDLWESYTSENEKNVPDAYKNTT--------GFFTNYKLDG 138
Query: 136 -VALLENAEVDV-----PTDWSG---LISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGW 186
ALL N +V P ++G L+ P L+G + M P+ S + + +L G
Sbjct: 139 SAALLVNKDVFAKLGLDPEKFTGYKDLLWPELKGKIAMGDPTASSSAIAELTNMLLVMGE 198
Query: 187 ----QQGWALIHQVMANV-GTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHS 241
++ W + + + + GTI S S + G A G+T +N A L D +
Sbjct: 199 KPYDEKAWEFVEKFVGQLDGTILSSSSQIYKATADGEYAVGVTYENPAVTLLQ---DGAT 255
Query: 242 ALIFKYFPNFPV-SPTFIAITTNSTNSRQASAFIHFLLSDPGQ 283
L Y V P AI N+ + A FI FL+SD GQ
Sbjct: 256 NLKLVYPDEGAVWLPGAAAIVKNAPHMENAKKFIDFLISDEGQ 298
>gi|114567985|ref|YP_755139.1| ABC transporter, periplasmic substrate-binding protein
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114338920|gb|ABI69768.1| ABC transporter, periplasmic substrate-binding protein
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 347
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 5/164 (3%)
Query: 124 AFSLSGCGIFSNVALLENAEVDVPTDWSGLISPNLQGLVIMSSPSRSDTTHIMIEALLQK 183
+L G N +L+ ++ P W L P +G + M +P+ S T++ ++ L+Q
Sbjct: 135 GLALVPAGFIVNEDILKEKGLEAPKTWEDLADPKYRGEISMPNPAISGTSYAIVSGLIQA 194
Query: 184 QGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHSAL 243
G ++ W + +N+ + ++KV AG A G+ A +NV
Sbjct: 195 WGEERAWKYFEALDSNIDFYAKGGGEPLEKVGAGEFAVGVV----AITGGTFNVGETRPT 250
Query: 244 IFKYFPNF-PVSPTFIAITTNSTNSRQASAFIHFLLSDPGQSTL 286
Y + P +P IAI N+ N A A I + LS GQ+ L
Sbjct: 251 RVVYPQDLIPWTPAPIAIFKNTENLDAAKALIDWYLSYDGQNIL 294
>gi|119871548|ref|YP_929555.1| hypothetical protein Pisl_0028 [Pyrobaculum islandicum DSM 4184]
gi|119672956|gb|ABL87212.1| conserved hypothetical protein [Pyrobaculum islandicum DSM 4184]
Length = 470
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 21/169 (12%)
Query: 79 NIDLVLSSSPMLFYHLQEKQRLAALPD--KFSQGKKFVPEILQKTT--------VAFSLS 128
++D + + +P+L+ L + LA +PD + Q + IL K V + L
Sbjct: 61 DVDFLWAGAPVLYEALLREGYLAPMPDVPELRQMPERAGGILLKRMGPDGKTYYVVYGLL 120
Query: 129 GCGI-FSNVALLENAEVDVPTDWSGLISPNLQGL--------VIMSSPSRSDTTHIMIEA 179
G I +SN AL + A V + W+ L SPNL V+++ P++S +T M++
Sbjct: 121 GYVIGYSNEALAK-AGVQLACSWAALASPNLTKYYLQTGAKPVVLARPTKSTSTAAMMQL 179
Query: 180 LLQKQGWQQGWALIHQVMANVGTISSRSFGVVDKVQAGLGAAGITIDNY 228
+ + GW++GW L+ + A+ + S S V D V+ G G +D Y
Sbjct: 180 VTEIYGWEEGWRLLTAMAAHSRFVDS-SGAVRDVVKRGEALFGPMVDYY 227
>gi|75759000|ref|ZP_00739109.1| ABC transporter substrate-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74493535|gb|EAO56642.1| ABC transporter substrate-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 330
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 25/255 (9%)
Query: 39 PESLSYLITEWEKQPNATSIRMLNRTSNS-LNKLFDDEKNDNIDLV-LSSSPMLFYHLQE 96
P+ L+ I + ++ + M T+ L ++ ++KN +D+V L+S P + +E
Sbjct: 39 PKGLAEKIQKDFEKXTGIKVEMFQGTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKE 98
Query: 97 KQRLAALPDKFSQGKKFVPEILQKTT--VAFSLSGCGIFSNVALLENAEVDVPTDWSGLI 154
Q LA K Q K E +S S GI N ++ A P DWS +
Sbjct: 99 GQTLAYKEAK--QADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTA----PEDWSDIT 152
Query: 155 SPNLQGLVIMSSPSRSDTTHIMIEALLQKQGWQQGWALIHQVMANVGTISSRSFGVVDKV 214
+G V + P+ S + + ++K G + GW L Q+ N T++ + +D V
Sbjct: 153 KGEWKGKVNLPDPALSGSALDFVTGYVKKNG-KDGWNLFEQLKKNEVTVAGANQEALDPV 211
Query: 215 QAG---LGAAGITIDNYANLLTHYNVD---PHSALIFKYFPNFPVSPTFIAITTNSTNSR 268
G + AG+ Y+ + VD P S + +SP I +S N
Sbjct: 212 VTGAKDMVIAGVDYMTYSAKVKGEPVDIVYPKSGTV--------ISPRAAGIMKDSKNVE 263
Query: 269 QASAFIHFLLSDPGQ 283
A FI +LLSD Q
Sbjct: 264 GAKEFIDYLLSDDVQ 278
>gi|19703717|ref|NP_603279.1| Iron(III)-binding protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19713845|gb|AAL94578.1| Iron(III)-binding protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 352
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 76/286 (26%), Positives = 125/286 (43%), Gaps = 49/286 (17%)
Query: 28 SNELVIGTTFSPESLSYLITEWEKQPNATSIRMLNRTSNS---LNKLFDDEKNDNIDLVL 84
SNELVI + + + ++ +I +E+ AT I+++ ++ S L ++ +++N D+
Sbjct: 37 SNELVIYSPNADDEVNKIIPAFEE---ATGIKVILQSMGSGDVLARISAEKENPQADINW 93
Query: 85 SSSPMLFYHLQEKQRLAALPDKF----SQGKKFVPEILQKTTVAFSLSGCGIFSN----- 135
+ M LA PD + S+ +K VP+ + TT G F+N
Sbjct: 94 GAISM--------GVLATTPDLWESYTSENEKNVPDAYKNTT--------GFFTNYKLDG 137
Query: 136 -VALLENAEVDV-----PTDWSG---LISPNLQGLVIMSSPSRSDTTHIMIEALLQKQGW 186
ALL N +V P ++G L+ P L+G + M P+ S + + +L G
Sbjct: 138 SAALLVNKDVFKKLGLDPEKFNGYKDLLWPELKGKIAMGDPTASSSAIAELTNMLLVMGE 197
Query: 187 ----QQGWALIHQVMANV-GTISSRSFGVVDKVQAGLGAAGITIDNYANLLTHYNVDPHS 241
++ W I + + + GTI S S + G A G+T +N A L D +
Sbjct: 198 KPYDEKAWEFIEKFIGQLDGTILSSSSQIYKATADGEYAVGVTYENPAVTLLQ---DGAT 254
Query: 242 ALIFKYFPNFPV-SPTFIAITTNSTNSRQASAFIHFLLSDPGQSTL 286
L Y V P AI N+ + A FI FL+SD GQ +
Sbjct: 255 NLKLVYPEEGSVWLPGAAAIVKNAPHMENAKKFIDFLISDEGQKVV 300
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.320 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,488,701,232
Number of Sequences: 5470121
Number of extensions: 60942283
Number of successful extensions: 155974
Number of sequences better than 1.0e-05: 92
Number of HSP's better than 0.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 155789
Number of HSP's gapped (non-prelim): 94
length of query: 416
length of database: 1,894,087,724
effective HSP length: 135
effective length of query: 281
effective length of database: 1,155,621,389
effective search space: 324729610309
effective search space used: 324729610309
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)