proteins
| 64 proteins |
G | COG0176 | Transaldolase | Help | |
|---|---|---|---|---|---|
| 1 from | query genome Sinorhizobium meliloti (Rhizobiales | Alphaproteobacteria) | ||||
| SMc02495 | ||||
143 letters (r) 0
0 694 _ ||| 1 SMb20271 (143) COG1765 0
6
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= SMb20271
(143 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
SMb20271 271 2e-73
mll0741 237 6e-63
YPO0176 159 2e-39
PA0653 151 4e-37
ECs4207 149 2e-36
ZyhfA 149 2e-36
yhfA 149 2e-36
STM3465 146 1e-35
RSc0489 144 7e-35
NMB1564 131 3e-31
VCA0838 116 1e-26
NMA1753 112 3e-25
PAB1905 96 3e-20
PH1469 92 3e-19
TM0919 91 7e-19
DR1177 81 8e-16
aq_1549 77 2e-14
Ta1411m 62 3e-10
TVN1430 60 1e-09
aq_1515 54 8e-08
lin1816 50 1e-06
BH0885 38 0.005
PH0818 36 0.020
PA1203 32 0.33
SPAC24C9.06c 32 0.45
lin0902 31 1.1
L186839 30 1.4
PA3957 30 1.5
CC2942 30 1.7
lin2886 30 2.0
SPBP4H10.15 30 2.1
mll6665 28 8.2
SMa1473 28 8.9
# >SMb20271
# Length = 143
#
# Score = 271 bits (694), Expect = 2e-73
# Identities = 143/143 (100%), Positives = 143/143 (100%)
#
# Query: 1 MKARIKWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL 60
# MKARIKWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL
# Sbjct: 1 MKARIKWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL 60
#
# Query: 61 EKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSAS 120
# EKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSAS
# Sbjct: 61 EKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSAS 120
#
# Query: 121 AMLAKTATITHDFEVVDTSDTAA 143
# AMLAKTATITHDFEVVDTSDTAA
# Sbjct: 121 AMLAKTATITHDFEVVDTSDTAA 143
#
#
# >mll0741
# Length = 141
#
# Score = 237 bits (605), Expect = 6e-63
# Identities = 116/139 (83%), Positives = 131/139 (93%)
#
# Query: 1 MKARIKWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL 60
# MKARIKWVE RTF+GESGSGHK+V GTA+GPD TPGPSPME+VLIGTGGCSA+DVVHIL
# Sbjct: 1 MKARIKWVEERTFIGESGSGHKLVLGTASGPDGKTPGPSPMELVLIGTGGCSAYDVVHIL 60
#
# Query: 61 EKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSAS 120
# EKGREAVEDCVVE+DADRA+ DP+VFTRIHMHFIVKGR L++ KV+RA+ LSIEKYCSAS
# Sbjct: 61 EKGREAVEDCVVELDADRAETDPKVFTRIHMHFIVKGRALSSDKVQRAINLSIEKYCSAS 120
#
# Query: 121 AMLAKTATITHDFEVVDTS 139
# AM+AKTATITHDFEV+DT+
# Sbjct: 121 AMMAKTATITHDFEVIDTA 139
#
#
# >YPO0176
# Length = 135
#
# Score = 159 bits (401), Expect = 2e-39
# Identities = 78/135 (57%), Positives = 101/135 (74%), Gaps = 4/135 (2%)
#
# Query: 1 MKARIKWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL 60
# M+AR+KWVEG TF+GES SGH+++ +G + PSPMEM+L+ GGCSA DVV IL
# Sbjct: 1 MQARVKWVEGLTFLGESASGHQVLMDGNSGDKA----PSPMEMLLMSAGGCSAIDVVSIL 56
#
# Query: 61 EKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSAS 120
# +KGR V DC V++ ++R ++ PR+FT+I++HFIV G+GL K VERAV LS EKYCS +
# Sbjct: 57 QKGRNNVRDCEVKLTSERREEAPRLFTQINLHFIVSGKGLTDKVVERAVDLSAEKYCSVA 116
#
# Query: 121 AMLAKTATITHDFEV 135
# ML K ATITH FEV
# Sbjct: 117 LMLGKAATITHSFEV 131
#
#
# >PA0653
# Length = 140
#
# Score = 151 bits (382), Expect = 4e-37
# Identities = 77/138 (55%), Positives = 98/138 (70%), Gaps = 1/138 (0%)
#
# Query: 1 MKARIKWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL 60
# MKARI+W F+GESGSGH +V G PMEMVLIG GGC+ FDVV IL
# Sbjct: 1 MKARIQWAGEAMFLGESGSGHVVVMDGPPDHGGRNLGVRPMEMVLIGLGGCTNFDVVSIL 60
#
# Query: 61 EKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSAS 120
# +K R+ VE C ++A+RAD++P+VFT+IH+HF+VKGRGL +V+RAV LS EKYCSAS
# Sbjct: 61 KKARQPVESCEAFLEAERADEEPKVFTKIHVHFVVKGRGLKEAQVKRAVELSAEKYCSAS 120
#
# Query: 121 AMLAKTAT-ITHDFEVVD 137
# ML + ITHD+E+V+
# Sbjct: 121 IMLGRGGVEITHDYEIVE 138
#
#
# >ECs4207
# Length = 134
#
# Score = 149 bits (377), Expect = 2e-36
# Identities = 76/136 (55%), Positives = 97/136 (70%), Gaps = 4/136 (2%)
#
# Query: 1 MKARIKWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL 60
# M+AR+KWVEG TF+GES SGH+I+ +G + PSPMEMVL+ GGCSA DVV IL
# Sbjct: 1 MQARVKWVEGLTFLGESASGHQILMDGNSGDKA----PSPMEMVLMAAGGCSAIDVVSIL 56
#
# Query: 61 EKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSAS 120
# +KGR+ V DC V++ ++R ++ PR+FT I++HFIV GR L V RAV LS EKYCS +
# Sbjct: 57 QKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVA 116
#
# Query: 121 AMLAKTATITHDFEVV 136
# ML K ITH +EVV
# Sbjct: 117 LMLEKAVNITHSYEVV 132
#
#
# >ZyhfA
# Length = 134
#
# Score = 149 bits (377), Expect = 2e-36
# Identities = 76/136 (55%), Positives = 97/136 (70%), Gaps = 4/136 (2%)
#
# Query: 1 MKARIKWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL 60
# M+AR+KWVEG TF+GES SGH+I+ +G + PSPMEMVL+ GGCSA DVV IL
# Sbjct: 1 MQARVKWVEGLTFLGESASGHQILMDGNSGDKA----PSPMEMVLMAAGGCSAIDVVSIL 56
#
# Query: 61 EKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSAS 120
# +KGR+ V DC V++ ++R ++ PR+FT I++HFIV GR L V RAV LS EKYCS +
# Sbjct: 57 QKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVA 116
#
# Query: 121 AMLAKTATITHDFEVV 136
# ML K ITH +EVV
# Sbjct: 117 LMLEKAVNITHSYEVV 132
#
#
# >yhfA
# Length = 134
#
# Score = 149 bits (377), Expect = 2e-36
# Identities = 76/136 (55%), Positives = 97/136 (70%), Gaps = 4/136 (2%)
#
# Query: 1 MKARIKWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL 60
# M+AR+KWVEG TF+GES SGH+I+ +G + PSPMEMVL+ GGCSA DVV IL
# Sbjct: 1 MQARVKWVEGLTFLGESASGHQILMDGNSGDKA----PSPMEMVLMAAGGCSAIDVVSIL 56
#
# Query: 61 EKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSAS 120
# +KGR+ V DC V++ ++R ++ PR+FT I++HFIV GR L V RAV LS EKYCS +
# Sbjct: 57 QKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVA 116
#
# Query: 121 AMLAKTATITHDFEVV 136
# ML K ITH +EVV
# Sbjct: 117 LMLEKAVNITHSYEVV 132
#
#
# >STM3465
# Length = 134
#
# Score = 146 bits (369), Expect = 1e-35
# Identities = 73/136 (53%), Positives = 95/136 (69%), Gaps = 4/136 (2%)
#
# Query: 1 MKARIKWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL 60
# M+AR+KWVEG TF+GES SGH+I+ +G + PSPMEMVL+ GGCSA DVV IL
# Sbjct: 1 MQARVKWVEGLTFLGESSSGHQILMDGNSGDKA----PSPMEMVLMAAGGCSAIDVVSIL 56
#
# Query: 61 EKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSAS 120
# +KGR+ V +C V++ ++R + PR+FT I++HFIV G L V RAV LS EKYCS +
# Sbjct: 57 QKGRQNVTNCEVKLTSERREDAPRLFTHINLHFIVTGSDLKEAAVARAVDLSAEKYCSVA 116
#
# Query: 121 AMLAKTATITHDFEVV 136
# ML K ITH +EV+
# Sbjct: 117 LMLEKAVNITHSYEVI 132
#
#
# >RSc0489
# Length = 148
#
# Score = 144 bits (362), Expect = 7e-35
# Identities = 76/145 (52%), Positives = 97/145 (66%), Gaps = 2/145 (1%)
#
# Query: 1 MKARIKWV--EGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVH 58
# M+ + W +G F+ E+GSGH + A P PMEMVL+GTGGC+A+DVV
# Sbjct: 1 MECTVSWTGPDGMAFLAETGSGHLVTMDGAPDGGGRNLAPRPMEMVLLGTGGCTAYDVVL 60
#
# Query: 59 ILEKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCS 118
# IL++GR+ V+ C V++ A+RA+ DP+VFTRIH F V GR L + VERAV LS EKYCS
# Sbjct: 61 ILKRGRQDVQGCSVKLLAERAETDPKVFTRIHFTFTVTGRNLKRETVERAVQLSHEKYCS 120
#
# Query: 119 ASAMLAKTATITHDFEVVDTSDTAA 143
# AS MLAKTA ITH E+VD + A
# Sbjct: 121 ASIMLAKTAEITHSLELVDLAVAGA 145
#
#
# >NMB1564
# Length = 140
#
# Score = 131 bits (330), Expect = 3e-31
# Identities = 68/135 (50%), Positives = 84/135 (61%)
#
# Query: 1 MKARIKWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL 60
# M+ KW++G FVG + GH +V + GPSP+EM+L+G GCS+ DVV I
# Sbjct: 1 MQVTSKWIDGMCFVGTTEGGHSVVMEGSAAEGKAKRGPSPLEMLLLGVAGCSSIDVVMIA 60
#
# Query: 61 EKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSAS 120
# EK R+ V DC + A RAD PRVFT IH+HF V G L +ERAV +S EKYCSAS
# Sbjct: 61 EKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVFGHDLKESAIERAVQMSAEKYCSAS 120
#
# Query: 121 AMLAKTATITHDFEV 135
# ML K A ITH FE+
# Sbjct: 121 IMLGKAAKITHSFEI 135
#
#
# >VCA0838
# Length = 134
#
# Score = 116 bits (291), Expect = 1e-26
# Identities = 58/135 (42%), Positives = 84/135 (61%), Gaps = 4/135 (2%)
#
# Query: 1 MKARIKWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL 60
# M+A++KWVE F+G S SGH IV G + PSPMEMVL+ GGCS+ DVV +
# Sbjct: 1 MQAQVKWVEDFRFIGLSNSGHSIVMDGNGGASA----PSPMEMVLMAAGGCSSVDVVDGM 56
#
# Query: 61 EKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSAS 120
# +K + + C ++ A+R D P++FT++++HF+V G L + V R A S+EKYCS
# Sbjct: 57 KKAGQKIHGCTAQLSAERRDTAPKLFTQVNIHFVVSGEDLDQEIVARVTADSLEKYCSVC 116
#
# Query: 121 AMLAKTATITHDFEV 135
# ML K +TH +E+
# Sbjct: 117 LMLGKGVEMTHSWEI 131
#
#
# >NMA1753
# Length = 116
#
# Score = 112 bits (280), Expect = 3e-25
# Identities = 58/99 (58%), Positives = 68/99 (68%)
#
# Query: 37 GPSPMEMVLIGTGGCSAFDVVHILEKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVK 96
# GPSP+EM+L+G GCS+ DVV I EK R+ V DC + A RAD PRVFT IH+HF V
# Sbjct: 13 GPSPLEMLLLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVF 72
#
# Query: 97 GRGLAAKKVERAVALSIEKYCSASAMLAKTATITHDFEV 135
# G L +ERAV +S EKYCSAS ML K A ITH FE+
# Sbjct: 73 GHDLKESAIERAVQMSAEKYCSASIMLGKAAKITHSFEI 111
#
#
# >PAB1905
# Length = 146
#
# Score = 95.5 bits (236), Expect = 3e-20
# Identities = 50/138 (36%), Positives = 82/138 (59%), Gaps = 11/138 (7%)
#
# Query: 1 MKARIKWVEGRTFVGE-SGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHI 59
# +K R++W+EG F+G G ++ G G SPM+++L+ GC+A+DVV I
# Sbjct: 7 VKGRVRWIEGEQFIGRIEGDQCSVILGEG--------GISPMKLLLLSVAGCTAYDVVMI 58
#
# Query: 60 LEKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSA 119
# LEK RE ++ VE++ R ++ PR++ + +H+ + G + KK RA+ LS EKYCSA
# Sbjct: 59 LEKMREPIKGLEVEIEGVRREEHPRIYKEVTIHYRIYG-NVDEKKARRAIELSQEKYCSA 117
#
# Query: 120 SAMLAKTAT-ITHDFEVV 136
# SA L + T + + E++
# Sbjct: 118 SAHLKLSGTNVKYTLEII 135
#
#
# >PH1469
# Length = 148
#
# Score = 92.4 bits (228), Expect = 3e-19
# Identities = 49/138 (35%), Positives = 82/138 (58%), Gaps = 11/138 (7%)
#
# Query: 1 MKARIKWVEGRTFVGE-SGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHI 59
# +K +++WVEG F+G G ++ G G SPM+++L+ GC+++DVV I
# Sbjct: 9 VKGKVRWVEGEQFIGRIEGDKCSVILGEG--------GISPMKLLLLSVAGCTSYDVVMI 60
#
# Query: 60 LEKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSA 119
# L+K RE ++ VE++ R ++ PR++ + +H+ + G + KK RA+ LS EKYCSA
# Sbjct: 61 LKKMREPIKGLEVEIEGVRREEHPRIYKEVTIHYKIYG-NVNEKKARRAIELSQEKYCSA 119
#
# Query: 120 SAMLAKTAT-ITHDFEVV 136
# SA L + T + + EV+
# Sbjct: 120 SAHLKLSGTDVKYTLEVI 137
#
#
# >TM0919
# Length = 138
#
# Score = 91.3 bits (225), Expect = 7e-19
# Identities = 47/130 (36%), Positives = 77/130 (59%), Gaps = 3/130 (2%)
#
# Query: 6 KWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHILEKGR- 64
# +W+ F + S H ++ T P P+E+VL G GC+ DVV IL K +
# Sbjct: 4 RWIGNMMFHVRTDSNHDVLMDTKEEVGGKDAAPRPLELVLTGLMGCTGMDVVSILRKMKV 63
#
# Query: 65 -EAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAK-KVERAVALSIEKYCSASAM 122
# + ++D +E++ +R ++ PR+FT++H+ +I K G K KVE+AV LS EKYCS SA+
# Sbjct: 64 IDQMKDFRIEIEYERTEEHPRIFTKVHLKYIFKFDGEPPKDKVEKAVQLSQEKYCSVSAI 123
#
# Query: 123 LAKTATITHD 132
# L ++ +T++
# Sbjct: 124 LKCSSKVTYE 133
#
#
# >DR1177
# Length = 140
#
# Score = 80.9 bits (198), Expect = 8e-16
# Identities = 45/120 (37%), Positives = 72/120 (59%), Gaps = 6/120 (5%)
#
# Query: 5 IKWVEGRTFVGESGSGHKIVFGTATGPDSPTP-GPSPMEMVLIGTGGCSAFDVVHILEKG 63
# + W+ + ++G S SGH+++ +SP G SPME +L C+A+DVV I++K
# Sbjct: 9 VTWLGEQRYLGVSESGHQLLID-----NSPVKVGVSPMEALLGALATCTAYDVVEIMKKR 63
#
# Query: 64 REAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSASAML 123
# R + +E++ +RAD DP+ +TRI + I G G+ A+ + +A LS EKYCS +A L
# Sbjct: 64 RTPLASYRIEVEGERADTDPKRYTRITVRHIAAGEGVTAEALSKAAHLSHEKYCSVAASL 123
#
#
# >aq_1549
# Length = 132
#
# Score = 76.6 bits (187), Expect = 2e-14
# Identities = 41/125 (32%), Positives = 69/125 (54%), Gaps = 15/125 (12%)
#
# Query: 11 RTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHILEKGREAVEDC 70
# +T +GE +G K G +PME++L+ G CS DV HIL+K R+ V+D
# Sbjct: 19 KTSIGEITAGEK--------------GLNPMELLLVSIGSCSGVDVYHILKKKRQEVKDI 64
#
# Query: 71 VVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSASAMLAKTATIT 130
# + + R ++ P+++ I + ++ G+ + K +E+AV LS EKYCS AM+ + +
# Sbjct: 65 KIFLKGKRREKHPKIYEEIEIKYVAVGK-VEEKALEQAVKLSTEKYCSVLAMVKPSTNLK 123
#
# Query: 131 HDFEV 135
# +EV
# Sbjct: 124 ISWEV 128
#
#
# >Ta1411m
# Length = 152
#
# Score = 62.4 bits (150), Expect = 3e-10
# Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
#
# Query: 1 MKARIKWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL 60
# MK +V G F + G ++ + D +P E++L+ G C++ DV+ IL
# Sbjct: 1 MKVSFHYVPGEGFDSDDGKDKVRIYFSQDRKDERH---APTELLLLAIGSCTSDDVLSIL 57
#
# Query: 61 EKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSAS 120
# +K R+ E+ ++ D+ PR+ H+ +I +G + A K +A+ LS++KYCS S
# Sbjct: 58 KKMRQEFTSYRCEISGEKRDEHPRILKYAHIKYIFEG-NVDADKARKAIHLSLKKYCSVS 116
#
#
# >TVN1430
# Length = 153
#
# Score = 60.1 bits (144), Expect = 1e-09
# Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
#
# Query: 1 MKARIKWVEGRTFVGESGSGH-KIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHI 59
# M+ + +G F + G KI + P+ SP E++L+ GGC++ DV+ I
# Sbjct: 1 MQVSFVYKDGEGFDSDDGKETVKITYSQGGDPNR----HSPTELLLLAIGGCTSDDVLSI 56
#
# Query: 60 LEKGREAVED--CVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYC 117
# L K R+ V+ CVVE ++ + PR+ ++ +I+ G + K RA+ LS++KYC
# Sbjct: 57 LHKMRQDVKSYRCVVE--GEKRSEHPRILKFANVSYIING-DVDPDKARRAIHLSLKKYC 113
#
# Query: 118 SASAM 122
# S S M
# Sbjct: 114 SVSIM 118
#
#
# >aq_1515
# Length = 138
#
# Score = 54.3 bits (129), Expect = 8e-08
# Identities = 40/139 (28%), Positives = 69/139 (48%), Gaps = 4/139 (2%)
#
# Query: 1 MKARIKWVEGRTFVGESGSGHKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL 60
# MK ++K E F+G +G ++ A G P E++ GC + L
# Sbjct: 1 MKVKVKQKEDFHFIGVGPAGREVPIDAADYVGGKGRGIRPPELLFHSVAGCVGIHLYEAL 60
#
# Query: 61 EKGREAVEDCVVEMDADR-ADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEK--YC 117
# K + VED +E DA+R D+ P+VFT+I++ VKG ++ ++V+ A+ I C
# Sbjct: 61 HKEGKHVEDIEIETDAERITDRYPKVFTKIYLFVKVKG-DVSEEEVKNALDKVIYNPGTC 119
#
# Query: 118 SASAMLAKTATITHDFEVV 136
# S + M+ + A I + E++
# Sbjct: 120 SIAYMVNQVAPIEYKVEIL 138
#
#
# >lin1816
# Length = 126
#
# Score = 50.4 bits (119), Expect = 1e-06
# Identities = 28/98 (28%), Positives = 49/98 (49%), Gaps = 1/98 (1%)
#
# Query: 39 SPMEMVLIGTGGCSAFDVVHILEKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGR 98
# SP +++L+ CSA +IL K R D V+ +R ++ + IH+HF + G
# Sbjct: 29 SPADLMLMSIASCSAIVFRNILRKKRVDFTDLWVDATMERIPEEENRISAIHLHFKITGT 88
#
# Query: 99 GLAAKKVERAVALSIEKYCSASAMLAKTATITHDFEVV 136
# L +E+A+ L+ KYCS + K+ + E++
# Sbjct: 89 DLDPNPLEKALKLT-PKYCSMVRSVEKSIIVDESLEIM 125
#
#
# >BH0885
# Length = 126
#
# Score = 38.1 bits (87), Expect = 0.005
# Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
#
# Query: 25 FGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHILEKGREAVEDCVVEMDADRADQDPR 84
# FGT + G P ++++ CS + +L+K R + +D + D R +Q
# Sbjct: 16 FGTLEVSGNEQYGFRPYQLLVSSIAVCSGGVLRKVLDKMRISYDDMKITADVKRNEQGVN 75
#
# Query: 85 VFTRIHMHFIVKGRGLAAKKVERAVALSIEKYCSASAMLAKTATITHDFEV 135
# T I +HF + G + +K+++A+ ++ K C + + IT FE+
# Sbjct: 76 EVTDIALHFSLFGVDASEEKIKKALHVTW-KNCPIVQSVKDSIRITETFEL 125
#
#
# >PH0818
# Length = 162
#
# Score = 36.2 bits (82), Expect = 0.020
# Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
#
# Query: 4 RIKWVEGRTFVGESGSGHKI---VFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHIL 60
# R+++ T+ G GS K+ F T D GP+P E +L GGC + ++
# Sbjct: 25 RLEYQAELTWDGNVGSRAKVREFEFSIDTNTDGFNKGPNPTEYLLAALGGCLTVNWGRLI 84
#
# Query: 61 EKGREAVEDCVVEMDADRADQDPRV 85
# +K R VE + + R+ +P++
# Sbjct: 85 KKMRLNVESMKITVSGWRSRDEPQL 109
#
#
# >PA1203
# Length = 135
#
# Score = 32.3 bits (72), Expect = 0.33
# Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
#
# Query: 37 GPSPMEMVLIGTGGCSAFDVVHILEKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVK 96
# GPSP E++L G C+A V ++ +E V+++ P FT I +
# Sbjct: 40 GPSPHEILLSALGACTAITVAMYAQRKEWPLEGIDVQLNIVEERTKPEPFTHIRRDIRLA 99
#
# Query: 97 GRGLAAKKVERAVALSIEKYCSASAMLAKTATIT 130
# G L A++ +R L I C +L+ +++
# Sbjct: 100 G-DLDAEQRQR--LLEIANACPIHRVLSGEVSVS 130
#
#
# >SPAC24C9.06c
# Length = 778
#
# Score = 32.0 bits (71), Expect = 0.45
# Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
#
# Query: 17 SGSGHKIVF-------GTATGPDSPTPGPSPMEMVLIGTGGCSAFDVV 57
# SG H+IV G G DS TP + MV IG GG A DV+
# Sbjct: 166 SGIIHQIVLENYAFPGGLLIGTDSHTPNAGGLGMVAIGVGGADAVDVM 213
#
#
# >lin0902
# Length = 126
#
# Score = 30.8 bits (68), Expect = 1.1
# Identities = 18/61 (29%), Positives = 32/61 (51%), Gaps = 3/61 (4%)
#
# Query: 37 GPSPMEMVLIGTGGCSAFDVVHILEKGREAVEDCVVEMDADRADQDP--RVFTRIHMHFI 94
# G SP+++ + CS + +LEK R + D + D ++ DQ+ V T+I++ F
# Sbjct: 26 GFSPVQITVAAVAACSGYVYQTLLEKKRIEINDLSIHTDYEQ-DQESAVHVLTKINVTFT 84
#
# Query: 95 V 95
# V
# Sbjct: 85 V 85
#
#
# >L186839
# Length = 144
#
# Score = 30.4 bits (67), Expect = 1.4
# Identities = 33/139 (23%), Positives = 57/139 (40%), Gaps = 12/139 (8%)
#
# Query: 3 ARIKWVEGRTFVGESGSG---HKIVFGTATGPDSPTPGPSPMEMVLIGTGGCSAFDVVHI 59
# + I WV GR +G+ +G KI D P G +P EM+L C + + +
# Sbjct: 8 SHIDWVGGRNSIGDLQAGALNEKISIPKTM--DGPGVGTNPDEMLLGAASTCYSITLAAM 65
#
# Query: 60 LEKGREAVEDCVVEMDADRADQDPRVFT--RIHMHFIVKGRGLAAKKVERAVALSIEKYC 117
# LE+ +E V+ D FT +I H +K K+ + A+ + K
# Sbjct: 66 LERNDILLEHLKVDAKG-IVDVTKGTFTYEKITYHVAMK----LTKESDEVKAIKLAKRA 120
#
# Query: 118 SASAMLAKTATITHDFEVV 136
# +S M+++ + E +
# Sbjct: 121 ESSCMISRAIQGNIELETI 139
#
#
# >PA3957
# Length = 278
#
# Score = 30.0 bits (66), Expect = 1.5
# Identities = 26/93 (27%), Positives = 41/93 (43%), Gaps = 9/93 (9%)
#
# Query: 44 VLIGTGGCSAFDVVHILEKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLA-- 101
# V++ +GGCS L R ++++D D + + H + GL
# Sbjct: 15 VVLVSGGCSGIGRALALRFARAGARLAILDLDQAALDS---LVQHLRDHLGGEALGLRCD 71
#
# Query: 102 ---AKKVERAVALSIEKYCSASAMLAKTATITH 131
# A VERAVAL++E++ +L A ITH
# Sbjct: 72 VADADAVERAVALAVERF-GGIDVLVNNAGITH 103
#
#
# >CC2942
# Length = 501
#
# Score = 30.0 bits (66), Expect = 1.7
# Identities = 23/96 (23%), Positives = 42/96 (42%), Gaps = 7/96 (7%)
#
# Query: 42 EMVLIG-TGGCSAFDVVHILEKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGL 100
# E +++G G AFD++ + G + M A+ +RI + G GL
# Sbjct: 351 ERIIVGEVRGPEAFDLLQAMNTGHDG------SMGTLHANSPREAISRIESMITMGGYGL 404
#
# Query: 101 AAKKVERAVALSIEKYCSASAMLAKTATITHDFEVV 136
# +K ++ + S++ A+ + + ITH EVV
# Sbjct: 405 PSKTIKEMIVGSVDVIIQAARLRDGSRRITHITEVV 440
#
#
# >lin2886
# Length = 214
#
# Score = 29.6 bits (65), Expect = 2.0
# Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
#
# Query: 71 VVEMDADRADQDPRVFTRIHMHFIVK----GRGLAAKKV--ERAVALSIEKYCSAS-AML 123
# VV ++A+ ++ RV +IH + +VK G GLAA KV E + ++ SA+ A+L
# Sbjct: 58 VVSLNAEEMIEEGRVIAKIHPNMVVKIPMTGEGLAAVKVLTEEGIKTNVTLVFSATQALL 117
#
# Query: 124 AKTATITH 131
# A A T+
# Sbjct: 118 AARAGATY 125
#
#
# >SPBP4H10.15
# Length = 905
#
# Score = 29.6 bits (65), Expect = 2.1
# Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
#
# Query: 17 SGSGHKIVF-------GTATGPDSPTPGPSPMEMVLIGTGGCSAFDVV 57
# SG H+IV G G DS TP + M+ IG GG A D +
# Sbjct: 170 SGIIHQIVLENYAAPGGMMLGTDSHTPNAGGLGMIAIGVGGADAVDAM 217
#
#
# >mll6665
# Length = 554
#
# Score = 27.7 bits (60), Expect = 8.2
# Identities = 17/65 (26%), Positives = 28/65 (42%), Gaps = 3/65 (4%)
#
# Query: 58 HILEKGREAVEDCVVEMDADRADQDPRVFTRIHMHFIVKGRGLAAKKVERAVALSIEKYC 117
# H L+ R + D V E+ QDP + MH+ G +A + +E S +Y
# Sbjct: 133 HYLDAARPPLADTVAELATSTLKQDPSLG---QMHYSNAGIAVAGRVIETLTRKSYAEYV 189
#
# Query: 118 SASAM 122
# S + +
# Sbjct: 190 SENIL 194
#
#
# >SMa1473
# Length = 434
#
# Score = 27.7 bits (60), Expect = 8.9
# Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
#
# Query: 22 KIVFGTATGPDSPTPGPSPMEM-----------VLIGTGGCSAFDVVHILEKGREAVEDC 70
# K+V+ + +G D T GP E+ + +G CS + + ++G E V+DC
# Sbjct: 129 KLVWSSVSGKDDETAGPFADEITDLLKQHGGGSMKLGMDRCSHLQALALEKRGCE-VKDC 187
#
# Query: 71 VVEMDADRADQDP 83
# E+ A RA + P
# Sbjct: 188 QGEILAVRAVKTP 200
#
#
Database: myva
Posted date: Sep 16, 2002 2:25 PM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.319 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,148,464
Number of Sequences: 192987
Number of extensions: 634266
Number of successful extensions: 1935
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1890
Number of HSP's gapped (non-prelim): 43
length of query: 143
length of database: 59,019,183
effective HSP length: 99
effective length of query: 44
effective length of database: 39,913,470
effective search space: 1756192680
effective search space used: 1756192680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
S2: 60 (27.7 bits)