11 proteins |
C | COG3794 | Plastocyanin | Help |
---|
285 letters
1206 = VNG1637G (285) =
143 = VNG1188G (205) =
125 = VNG2196G (288) =
116 = VNG0586C (229) =
113 = VNG0573C (230) =
99 = VNG0249G (810) =
94 = sll0199 (126) =
87 = VNG0795G (157) =
69 _ mll5025 (388) COG0205
68 = VNG0786G (149) =
68 Rv1060 (157)
66 _ mlr2489 (398) COG0505
63 _ VNG2482G (345) COG1117
BLASTP 2.2.2 [Dec-14-2001] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= VNG1637G (285 letters) Database: xyva 108,091 sequences; 33,061,072 total letters Score E Sequences producing significant alignments: (bits) Value VNG1637G 469 e-132 VNG1188G 60 4e-09 VNG2196G 53 5e-07 VNG0586C 49 6e-06 VNG0573C 48 1e-05 VNG0249G 43 5e-04 sll0199 41 0.002 VNG0795G 38 0.013 mll5025 31 1.6 VNG0786G 31 2.1 Rv1060 31 2.1 mlr2489 30 3.6 VNG2482G 29 7.9 # >VNG1637G # Length = 285 # # Score = 469 bits (1206), Expect = e-132 # Identities = 229/285 (80%), Positives = 229/285 (80%) # # Query: 1 MSAMGRAPDRRTFLRSAVAGGLAAIAGCXXXXXXXXXXXXXXXXXXXXXPSEMSLHEWVT 60 # MSAMGRAPDRRTFLRSAVAGGLAAIAGC PSEMSLHEWVT # Sbjct: 1 MSAMGRAPDRRTFLRSAVAGGLAAIAGCTDRTTTGTTNQQPTTTHTETQPSEMSLHEWVT 60 # # Query: 61 SANTPESWTDHRGDATVSIAVGGHDLPYAFQPALTRVAPGTTVTWEWTGYGGAHNVIAVD 120 # SANTPESWTDHRGDATVSIAVGGHDLPYAFQPALTRVAPGTTVTWEWTGYGGAHNVIAVD # Sbjct: 61 SANTPESWTDHRGDATVSIAVGGHDLPYAFQPALTRVAPGTTVTWEWTGYGGAHNVIAVD 120 # # Query: 121 SAFDSGDSXXXXXXXXXXXXXXIGTHRYVSEPDRESGMKGIIAVEEYPTSGYPDVDRWLS 180 # SAFDSGDS IGTHRYVSEPDRESGMKGIIAVEEYPTSGYPDVDRWLS # Sbjct: 121 SAFDSGDSTATEDHTFTHTFTEIGTHRYVSEPDRESGMKGIIAVEEYPTSGYPDVDRWLS 180 # # Query: 181 PVHDYXXXXXXXXXXXXXXXXXXXXXQFDPLVLKVPEGTTVQWKWAGEESGGAHNVAFKS 240 # PVHDY QFDPLVLKVPEGTTVQWKWAGEESGGAHNVAFKS # Sbjct: 181 PVHDYDGTVVTDTTTVTVGDTSSGSTQFDPLVLKVPEGTTVQWKWAGEESGGAHNVAFKS 240 # # Query: 241 AAIGIQELRSEPGVHVTHTFNSTGTYRYFCSPHSELSGRGAIIVE 285 # AAIGIQELRSEPGVHVTHTFNSTGTYRYFCSPHSELSGRGAIIVE # Sbjct: 241 AAIGIQELRSEPGVHVTHTFNSTGTYRYFCSPHSELSGRGAIIVE 285 # # # >VNG1188G # Length = 205 # # Score = 59.7 bits (143), Expect = 4e-09 # Identities = 40/125 (32%), Positives = 53/125 (42%), Gaps = 10/125 (8%) # # Query: 54 SLHEWVTSANTPESWTDHRG--DATVSIAVGGHDLPYAFQPALTRVAPGTTVTWEWTGYG 111 # S+ +W+ + + D G + TV + V + Y F PA RV PGTTVT+EW # Sbjct: 40 SIDDWLGDVSNYDGVRDETGSSEVTVDVGVDANGGAYGFGPAAVRVDPGTTVTFEWV--S 97 # # Query: 112 GAHNVIAVDSAFDSGD-----SXXXXXXXXXXXXXXIGTHRYVSEPDRESGMKGIIAVEE 166 # HNV AV+S DS D G + Y P R GMKG + V + # Sbjct: 98 NTHNV-AVESQPDSADWGGVEEINNEGYTDSHTFETAGVYTYFCSPHRAMGMKGAVVVGD 156 # # Query: 167 YPTSG 171 # G # Sbjct: 157 ADVGG 161 # # # # Score = 59.7 bits (143), Expect = 4e-09 # Identities = 31/82 (37%), Positives = 46/82 (55%), Gaps = 10/82 (12%) # # Query: 208 FDPLVLKVPEGTTVQWKWAGEESGGAHNVAFKSAAI-----GIQELRSEPGVHVTHTFNS 262 # F P ++V GTTV ++W HNVA +S G++E+ +E G +HTF + # Sbjct: 78 FGPAAVRVDPGTTVTFEWVSN----THNVAVESQPDSADWGGVEEINNE-GYTDSHTFET 132 # # Query: 263 TGTYRYFCSPHSELSGRGAIIV 284 # G Y YFCSPH + +GA++V # Sbjct: 133 AGVYTYFCSPHRAMGMKGAVVV 154 # # # >VNG2196G # Length = 288 # # Score = 52.8 bits (125), Expect = 5e-07 # Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 8/81 (9%) # # Query: 208 FDPLVLKVPEGTTVQWKWAGEESGGAHNVAFKSAAIGIQELRSEP----GVHVTHTFNST 263 # F P ++V GTTV ++W HN+ + G +P G THTF++ # Sbjct: 84 FGPAAVRVDPGTTVSFEWVSN----THNILIDAQPDGADWGGHDPIENTGFTHTHTFDTE 139 # # Query: 264 GTYRYFCSPHSELSGRGAIIV 284 # G Y Y+C+PH + +GAI+V # Sbjct: 140 GVYTYYCNPHLTMGMKGAIVV 160 # # # # Score = 47.4 bits (111), Expect = 2e-05 # Identities = 30/101 (29%), Positives = 42/101 (40%), Gaps = 8/101 (7%) # # Query: 74 DATVSIAVGGHDLPYAFQPALTRVAPGTTVTWEWTGYGGAHNVIAVDSAFDSG-----DS 128 # + T+ + V + Y F PA RV PGTTV++EW HN++ +D+ D D # Sbjct: 68 EVTIDVGVDANGGTYGFGPAAVRVDPGTTVSFEWV--SNTHNIL-IDAQPDGADWGGHDP 124 # # Query: 129 XXXXXXXXXXXXXXIGTHRYVSEPDRESGMKGIIAVEEYPT 169 # G + Y P GMKG I V P+ # Sbjct: 125 IENTGFTHTHTFDTEGVYTYYCNPHLTMGMKGAIVVGAPPS 165 # # # >VNG0586C # Length = 229 # # Score = 49.3 bits (116), Expect = 6e-06 # Identities = 49/181 (27%), Positives = 64/181 (35%), Gaps = 14/181 (7%) # # Query: 10 RRTFLRSAV--AGGLAAIAGCXXXXXXXXXXXXXXX---XXXXXXPSEMSLHEWVTSANT 64 # RR FL+ A AGG AA+ + S T+A # Sbjct: 3 RRDFLKIATGSAGGAAAVGAVGARSSSSSSAVHQQAPGNATGNGTAMDNSTAGNETAAGG 62 # # Query: 65 PESWTDHRGDATVSIAVGGHDLPYAFQPALTRVAPGTTVTWEWTGYGGAHNVIAVDSAFD 124 # D G AT G + F PA V+PG TV W W G G HNV A + # Sbjct: 63 DSESGDGGGGATTKTVKVGPNNQNVFDPAEVYVSPGDTVKWVWEGSTG-HNVHATSVPDE 121 # # Query: 125 SG-----DSXXXXXXXXXXXXXXIGTHRYVSEPDRESGMKGIIAVEE---YPTSGYPDVD 176 # +G + G + YV +P + GMKG + V E P+ G V+ # Sbjct: 122 AGWDAQTEIVSAPHEYSHTFEGPTGEYSYVCDPHKSLGMKGKVIVNENGQAPSGGGGPVE 181 # # Query: 177 R 177 # R # Sbjct: 182 R 182 # # # # Score = 48.9 bits (115), Expect = 7e-06 # Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 4/80 (5%) # # Query: 208 FDPLVLKVPEGTTVQWKWAGEESGGAHNVAFKSAA--IGIQELRSEPGVHVTHTFNS-TG 264 # FDP + V G TV+W W G H + A E+ S P + +HTF TG # Sbjct: 88 FDPAEVYVSPGDTVKWVWEGSTGHNVHATSVPDEAGWDAQTEIVSAPHEY-SHTFEGPTG 146 # # Query: 265 TYRYFCSPHSELSGRGAIIV 284 # Y Y C PH L +G +IV # Sbjct: 147 EYSYVCDPHKSLGMKGKVIV 166 # # # >VNG0573C # Length = 230 # # Score = 48.1 bits (113), Expect = 1e-05 # Identities = 33/82 (40%), Positives = 42/82 (50%), Gaps = 9/82 (10%) # # Query: 208 FDPLVLKVPEGTTVQWKWAGEESGGAHNVAFKS----AAIGIQELRSEPGVHVTHTFNS- 262 # F P + V GT V++ W ESGG HNV A G+ + P THTF+ # Sbjct: 105 FKPAEMYVKPGTKVRFVW---ESGG-HNVHATEVPGDADWGVSTDIAGPPKEYTHTFDGP 160 # # Query: 263 TGTYRYFCSPHSELSGRGAIIV 284 # TG Y Y C+PH+ L +G IIV # Sbjct: 161 TGEYNYVCTPHASLGMKGTIIV 182 # # # # Score = 41.2 bits (95), Expect = 0.002 # Identities = 36/123 (29%), Positives = 47/123 (37%), Gaps = 12/123 (9%) # # Query: 60 TSANTPESWTDHRGDATVSIAVGGHDLPYAFQPALTRVAPGTTVTWEWTGYGGAHNVIAV 119 # T+A D G+ V + G ++ F+PA V PGT V + W G HNV A # Sbjct: 78 TAAAAEGEGGDGGGEKVVKVGPNGSNV---FKPAEMYVKPGTKVRFVWES--GGHNVHAT 132 # # Query: 120 DSAFD-----SGDSXXXXXXXXXXXXXXIGTHRYVSEPDRESGMKGIIAVEEYP--TSGY 172 # + D S D G + YV P GMKG I V + P GY # Sbjct: 133 EVPGDADWGVSTDIAGPPKEYTHTFDGPTGEYNYVCTPHASLGMKGTIIVTDSPPENKGY 192 # # Query: 173 PDV 175 # + # Sbjct: 193 QTI 195 # # # >VNG0249G # Length = 810 # # Score = 42.7 bits (99), Expect = 5e-04 # Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 25/100 (25%) # # Query: 208 FDPLVLKVPEGTTVQWKWAGEESGGAHNVA------------FKSAAIGIQELRSE---- 251 # +DP L V G TV W A G AH+V + S Q+ # Sbjct: 713 YDPAELTVSAGDTVAWTHA---DGEAHSVTAYEDDIPADATYWASGGFDSQDAAKTGWAN 769 # # Query: 252 ------PGVHVTHTFNSTGTYRYFCSPHSELSGRGAIIVE 285 # G HTF +TG + Y+C PH L G I+VE # Sbjct: 770 GKGAVTEGESYVHTFETTGEHEYYCIPHKNLGMEGTIVVE 809 # # # # Score = 33.1 bits (74), Expect = 0.42 # Identities = 28/100 (28%), Positives = 35/100 (35%), Gaps = 23/100 (23%) # # Query: 89 AFQPALTRVAPGTTVTWEWTGYGGAHNVIAVDS------------AFDSGDSXXXXXXXX 136 # A+ PA V+ G TV W G AH+V A + FDS D+ # Sbjct: 712 AYDPAELTVSAGDTVAWTHAD-GEAHSVTAYEDDIPADATYWASGGFDSQDAAKTGWANG 770 # # Query: 137 XXXXX----------XIGTHRYVSEPDRESGMKGIIAVEE 166 # G H Y P + GM+G I VEE # Sbjct: 771 KGAVTEGESYVHTFETTGEHEYYCIPHKNLGMEGTIVVEE 810 # # # >sll0199 # Length = 126 # # Score = 40.8 bits (94), Expect = 0.002 # Identities = 24/86 (27%), Positives = 35/86 (39%), Gaps = 11/86 (12%) # # Query: 208 FDPLVLKVPEGTTVQWKWAGEESGGAHNVAFKS--------AAIGIQELRSEPGVHVTHT 259 # F+P + + G V+W HN+ F + A + + L G T T # Sbjct: 44 FEPSTVTIKAGEEVKWV---NNKLSPHNIVFAADGVDADTAAKLSHKGLAFAAGESFTST 100 # # Query: 260 FNSTGTYRYFCSPHSELSGRGAIIVE 285 # F GTY Y+C PH G ++VE # Sbjct: 101 FTEPGTYTYYCEPHRGAGMVGKVVVE 126 # # # # Score = 30.8 bits (68), Expect = 2.1 # Identities = 25/105 (23%), Positives = 37/105 (34%), Gaps = 21/105 (20%) # # Query: 75 ATVSIAVGGHDLPYAFQPALTRVAPGTTVTWEWTGYGGAHNVIAVDS------------- 121 # A ++ +G F+P+ + G V W + V A D # Sbjct: 29 ANATVKMGSDSGALVFEPSTVTIKAGEEVKWVNNKLSPHNIVFAADGVDADTAAKLSHKG 88 # # Query: 122 -AFDSGDSXXXXXXXXXXXXXXIGTHRYVSEPDRESGMKGIIAVE 165 # AF +G+S GT+ Y EP R +GM G + VE # Sbjct: 89 LAFAAGESFTSTFTEP-------GTYTYYCEPHRGAGMVGKVVVE 126 # # # >VNG0795G # Length = 157 # # Score = 38.1 bits (87), Expect = 0.013 # Identities = 29/97 (29%), Positives = 41/97 (41%), Gaps = 22/97 (22%) # # Query: 207 QFDPLVLKVPEGTTVQWKWAGEESGGAHNVA----------FKSAAIGIQELRSE----- 251 # +F+P L V G TV W++ EES +HNV+ A G + + # Sbjct: 64 KFEPSELTVSVGDTVTWEF--EES--SHNVSAWPDMHDKISIPDGASGFGTMDKDGNQFA 119 # # Query: 252 ---PGVHVTHTFNSTGTYRYFCSPHSELSGRGAIIVE 285 # G + HTF + G Y Y C PH G ++VE # Sbjct: 120 VVDAGETLEHTFETAGEYTYVCMPHVASGMIGTVVVE 156 # # # # Score = 33.5 bits (75), Expect = 0.32 # Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 19/110 (17%) # # Query: 73 GDATVSIAVGGHDLPYAFQPALTRVAPGTTVTWEW-------TGYGGAHNVIAVD---SA 122 # G T+++A G + F+P+ V+ G TVTWE+ + + H+ I++ S # Sbjct: 51 GGNTIAVAPDGG---FKFEPSELTVSVGDTVTWEFEESSHNVSAWPDMHDKISIPDGASG 107 # # Query: 123 FDSGD------SXXXXXXXXXXXXXXIGTHRYVSEPDRESGMKGIIAVEE 166 # F + D + G + YV P SGM G + VEE # Sbjct: 108 FGTMDKDGNQFAVVDAGETLEHTFETAGEYTYVCMPHVASGMIGTVVVEE 157 # # # >mll5025 # Length = 388 # # Score = 31.2 bits (69), Expect = 1.6 # Identities = 19/58 (32%), Positives = 28/58 (47%), Gaps = 5/58 (8%) # # Query: 74 DATVSIAVGGHDLPYAFQPALTRVAPG-----TTVTWEWTGYGGAHNVIAVDSAFDSG 126 # DA ++ + G DLP A + AL PG + + GY GA + + AFD+G # Sbjct: 256 DAHGNVKLSGSDLPAALERALAEGLPGKRARVDALGYMPRGYVGAISAVDAQEAFDAG 313 # # # >VNG0786G # Length = 149 # # Score = 30.8 bits (68), Expect = 2.1 # Identities = 13/34 (38%), Positives = 16/34 (46%) # # Query: 252 PGVHVTHTFNSTGTYRYFCSPHSELSGRGAIIVE 285 # PG T G Y YFC PH RG ++V+ # Sbjct: 115 PGATYEVTLTVPGEYYYFCIPHEGAGMRGKLVVD 148 # # # >Rv1060 # Length = 157 # # Score = 30.8 bits (68), Expect = 2.1 # Identities = 21/58 (36%), Positives = 32/58 (54%), Gaps = 10/58 (17%) # # Query: 55 LHEWVTSANTPESW----TDHRGDATVSIAVGGHDLPYAFQPALTRVAPGTTVTWEWT 108 # + E +TS + P S+ TD +G +A+ + ++F PA T GTTVTW+WT # Sbjct: 70 VREELTSVDPPRSFGYTLTDIKGPLAPLVALV--EGKWSFAPADT----GTTVTWQWT 121 # # # >mlr2489 # Length = 398 # # Score = 30.0 bits (66), Expect = 3.6 # Identities = 17/56 (30%), Positives = 27/56 (47%), Gaps = 3/56 (5%) # # Query: 212 VLKVPEGTTVQWKWAGEESGGAHNVAFKSAAIGIQELRSEP---GVHVTHTFNSTG 264 # +L + +GT ++ + G V F +A G QE+ ++P G VT TF G # Sbjct: 13 LLVLADGTVIEGRGLGATGSAVAEVCFNTALTGYQEILTDPSYAGQIVTFTFPHIG 68 # # # >VNG2482G # Length = 345 # # Score = 28.9 bits (63), Expect = 7.9 # Identities = 28/114 (24%), Positives = 39/114 (33%), Gaps = 10/114 (8%) # # Query: 1 MSAMGRAPDRRTFLRSAVAGGLAAIAGCXXXXXXXXXXXXXXXXXXXXXPSEMSLHEWVT 60 # MS ++ RR+ RS AA AG P E+ E # Sbjct: 1 MSDTPQSEPRRSDDRSGADDATAAAAGSTDAAAAAVSSKTGGIAGPPGGPGEVDGDEPAV 60 # # Query: 61 SANTPES-------WTDHRGDATVSIAVGGHDLPYAFQPALTRVA---PGTTVT 104 # + ES WTD+ D ++V D Y + AL V+ P +VT # Sbjct: 61 ARTVGESDEQLQDAWTDYEFDGDAKVSVSDLDTYYGEERALESVSLDIPAESVT 114 # # Database: xyva Posted date: Feb 4, 2002 11:21 PM Number of letters in database: 33,061,072 Number of sequences in database: 108,091 Lambda K H 0.315 0.133 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,403,195 Number of Sequences: 108091 Number of extensions: 551779 Number of successful extensions: 1143 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 1113 Number of HSP's gapped (non-prelim): 21 length of query: 285 length of database: 33,061,072 effective HSP length: 105 effective length of query: 180 effective length of database: 21,711,517 effective search space: 3908073060 effective search space used: 3908073060 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 63 (28.9 bits) S2: 63 (28.9 bits)