R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 30 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|3421134|gb|AAC68511.1| (AF045666) arginine decarboxylase [Theobroma cacao]
Length = 406
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 406
0 150 300
Plus Strand HSPs:
Score = 229 (80.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 44/52 (84%), Positives = 46/52 (88%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT Q+LRVVKKL +GMLDCLQLLHFHIGS IPSTAL
Sbjct: 116 GHFGSTSGEKGKFGLTTTQVLRVVKKLQDSGMLDCLQLLHFHIGSQIPSTAL 167
>gi|3421198|gb|AAC68530.1| (AF045685) arginine decarboxylase [Arabidopsis
arenosa]
Length = 405
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 405
0 150 300
Plus Strand HSPs:
Score = 228 (80.3 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 44/52 (84%), Positives = 46/52 (88%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+KL+ GMLDCLQLLHFHIGS IPSTAL
Sbjct: 116 GHFGSTSGEKGKFGLTTIQILRVVRKLSQVGMLDCLQLLHFHIGSQIPSTAL 167
>gi|3421132|gb|AAC68510.1| (AF045665) arginine decarboxylase [Aethionema
grandiflora]
Length = 407
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 407
0 150 300
Plus Strand HSPs:
Score = 228 (80.3 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 44/52 (84%), Positives = 46/52 (88%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RVV+KL AGMLDCLQLLHFHIGS IPSTAL
Sbjct: 116 GHFGSTSGEKGKFGLTTTQIVRVVRKLRQAGMLDCLQLLHFHIGSQIPSTAL 167
>gi|7484739|pir||T08104 arginine decarboxylase (EC 4.1.1.19) - papaya
(fragment) >gi|3421138|gb|AAC68512.1| (AF045667) arginine
decarboxylase [Carica papaya]
Length = 408
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 408
0 150 300
Plus Strand HSPs:
Score = 227 (79.9 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 45/52 (86%), Positives = 45/52 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV KL AGMLDCLQLLHFHIGS IPSTAL
Sbjct: 116 GHFGSTSGEKGKFGLTTTQILRVVGKLKQAGMLDCLQLLHFHIGSQIPSTAL 167
>gi|3421180|gb|AAC68525.1| (AF045680) arginine decarboxylase [Arabis
drummondii]
Length = 405
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 405
0 150 300
Plus Strand HSPs:
Score = 226 (79.6 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 44/52 (84%), Positives = 45/52 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+KL GMLDCLQLLHFHIGS IPSTAL
Sbjct: 116 GHFGSTSGEKGKFGLTTIQILRVVRKLRQVGMLDCLQLLHFHIGSQIPSTAL 167
>gi|3421184|gb|AAC68526.1| (AF045681) arginine decarboxylase [Barbarea
vulgaris]
Length = 405
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 405
0 150 300
Plus Strand HSPs:
Score = 226 (79.6 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 44/52 (84%), Positives = 45/52 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+KL GMLDCLQLLHFHIGS IPSTAL
Sbjct: 116 GHFGSTSGEKGKFGLTTIQILRVVRKLRQVGMLDCLQLLHFHIGSQIPSTAL 167
>gi|3421194|gb|AAC68529.1| (AF045684) arginine decarboxylase [Capsella
bursa-pastoris]
Length = 405
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 405
0 150 300
Plus Strand HSPs:
Score = 226 (79.6 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 44/52 (84%), Positives = 45/52 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+KL GMLDCLQLLHFHIGS IPSTAL
Sbjct: 116 GHFGSTSGEKGKFGLTTIQILRVVRKLRQVGMLDCLQLLHFHIGSQIPSTAL 167
>gi|3421218|gb|AAC68535.1| (AF045690) arginine decarboxylase [Nasturtium
officinale]
Length = 405
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 405
0 150 300
Plus Strand HSPs:
Score = 226 (79.6 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 44/52 (84%), Positives = 45/52 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+KL GMLDCLQLLHFHIGS IPSTAL
Sbjct: 116 GHFGSTSGEKGKFGLTTIQILRVVRKLRQVGMLDCLQLLHFHIGSQIPSTAL 167
>gi|3421210|gb|AAC68533.1| (AF045688) arginine decarboxylase [Thlaspi arvense]
>gi|3421214|gb|AAC68534.1| (AF045689) arginine decarboxylase
[Thellungiella salsuginea]
Length = 403
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 403
0 150 300
Plus Strand HSPs:
Score = 225 (79.2 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 44/52 (84%), Positives = 45/52 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+ L AGMLDCLQLLHFHIGS IPSTAL
Sbjct: 116 GHFGSTSGEKGKFGLTTIQILRVVRNLRQAGMLDCLQLLHFHIGSQIPSTAL 167
>gi|3421144|gb|AAC68514.1| (AF045669) arginine decarboxylase [Arabis
drummondii]
Length = 407
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 407
0 150 300
Plus Strand HSPs:
Score = 224 (78.9 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 42/52 (80%), Positives = 47/52 (90%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RVV+KL+ +GMLDCLQLLHFHIGS IPST+L
Sbjct: 116 GHFGSTSGEKGKFGLTTTQIVRVVRKLSQSGMLDCLQLLHFHIGSQIPSTSL 167
>gi|3421161|gb|AAC68519.1| (AF045674) arginine decarboxylase [Arabidopsis
arenosa]
Length = 407
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 407
0 150 300
Plus Strand HSPs:
Score = 224 (78.9 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 42/52 (80%), Positives = 47/52 (90%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RVV+KL+ +GMLDCLQLLHFHIGS IPST+L
Sbjct: 116 GHFGSTSGEKGKFGLTTTQIVRVVRKLSQSGMLDCLQLLHFHIGSQIPSTSL 167
>gi|7436497|pir||S71239 arginine decarboxylase (EC 4.1.1.19) - Arabidopsis
thaliana >gi|1590814|gb|AAB09723.1| (U52851) arginine decarboxylase
[Arabidopsis thaliana]
Length = 702
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 702
0 150 300 450 600
Plus Strand HSPs:
Score = 229 (80.6 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 44/52 (84%), Positives = 46/52 (88%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+KL+ GMLDCLQLLHFHIGS IPSTAL
Sbjct: 244 GHFGSTSGEKGKFGLTTVQILRVVRKLSQVGMLDCLQLLHFHIGSQIPSTAL 295
>gi|12643847|sp|Q9SI64|SPE1_ARATH ARGININE DECARBOXYLASE 1 (ARGDC 1) (ADC 1)
(ADC-O) >gi|4589977|gb|AAD26494.1|AC007195_8 (AC007195) arginine
decarboxylase [Arabidopsis thaliana]
Length = 702
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 702
0 150 300 450 600
Plus Strand HSPs:
Score = 229 (80.6 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 44/52 (84%), Positives = 46/52 (88%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+KL+ GMLDCLQLLHFHIGS IPSTAL
Sbjct: 244 GHFGSTSGEKGKFGLTTVQILRVVRKLSQVGMLDCLQLLHFHIGSQIPSTAL 295
>gi|7436502|pir||T15046 arginine decarboxylase (EC 4.1.1.19) ADC-1 - wood
tobacco >gi|3062801|dbj|BAA25685.1| (AB012873) arginine
decarboxylase [Nicotiana sylvestris]
Length = 621
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 621
0 150 300 450 600
Plus Strand HSPs:
Score = 228 (80.3 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 44/52 (84%), Positives = 46/52 (88%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RVVKKL +GMLDCLQLLHFHIGS IPSTAL
Sbjct: 265 GHFGSTSGEKGKFGLTTTQIVRVVKKLEESGMLDCLQLLHFHIGSQIPSTAL 316
>gi|7230371|gb|AAF42970.1|AF127239_1 (AF127239) arginine decarboxylase 1
[Nicotiana tabacum] >gi|7230373|gb|AAF42971.1|AF127240_1 (AF127240)
arginine decarboxylase 1 [Nicotiana tabacum]
Length = 720
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 720
0 150 300 450 600
Plus Strand HSPs:
Score = 228 (80.3 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 44/52 (84%), Positives = 46/52 (88%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RVVKKL +GMLDCLQLLHFHIGS IPSTAL
Sbjct: 260 GHFGSTSGEKGKFGLTTTQIVRVVKKLEESGMLDCLQLLHFHIGSQIPSTAL 311
>gi|3421178|gb|AAC68524.1| (AF045679) arginine decarboxylase [Nasturtium
officinale]
Length = 407
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 407
0 150 300
Plus Strand HSPs:
Score = 222 (78.1 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 42/52 (80%), Positives = 46/52 (88%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RVV KL+ +GMLDCLQLLHFHIGS IPST+L
Sbjct: 116 GHFGSTSGEKGKFGLTTTQIVRVVSKLSQSGMLDCLQLLHFHIGSQIPSTSL 167
>gi|3421151|gb|AAC68516.1| (AF045671) arginine decarboxylase [Brassica nigra]
>gi|3421155|gb|AAC68517.1| (AF045672) arginine decarboxylase
[Brassica oleracea]
Length = 403
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 403
0 150 300
Plus Strand HSPs:
Score = 221 (77.8 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 41/52 (78%), Positives = 47/52 (90%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RV++KL+ +GMLDCLQLLHFHIGS IPST+L
Sbjct: 116 GHFGSTSGEKGKFGLTTTQIVRVMRKLSQSGMLDCLQLLHFHIGSQIPSTSL 167
>gi|3421164|gb|AAC68520.1| (AF045675) arginine decarboxylase [Sisymbrium
altissimum] >gi|3421166|gb|AAC68521.1| (AF045676) arginine
decarboxylase [Stanleya pinnata]
Length = 407
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 407
0 150 300
Plus Strand HSPs:
Score = 221 (77.8 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 41/52 (78%), Positives = 47/52 (90%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RV++KL+ +GMLDCLQLLHFHIGS IPST+L
Sbjct: 116 GHFGSTSGEKGKFGLTTTQIVRVMRKLSQSGMLDCLQLLHFHIGSQIPSTSL 167
>gi|3421170|gb|AAC68522.1| (AF045677) arginine decarboxylase [Thlaspi arvense]
Length = 407
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 407
0 150 300
Plus Strand HSPs:
Score = 221 (77.8 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 41/52 (78%), Positives = 47/52 (90%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RV++KL+ +GMLDCLQLLHFHIGS IPST+L
Sbjct: 116 GHFGSTSGEKGKFGLTTTQIVRVMRKLSQSGMLDCLQLLHFHIGSQIPSTSL 167
>gi|3421174|gb|AAC68523.1| (AF045678) arginine decarboxylase [Thellungiella
salsuginea]
Length = 407
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 407
0 150 300
Plus Strand HSPs:
Score = 221 (77.8 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 41/52 (78%), Positives = 47/52 (90%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RV++KL+ +GMLDCLQLLHFHIGS IPST+L
Sbjct: 116 GHFGSTSGEKGKFGLTTTQIVRVMRKLSQSGMLDCLQLLHFHIGSQIPSTSL 167
>gi|3421188|gb|AAC68527.1| (AF045682) arginine decarboxylase [Brassica nigra]
Length = 401
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 401
0 150 300
Plus Strand HSPs:
Score = 220 (77.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 43/52 (82%), Positives = 44/52 (84%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+ L GMLDCLQLLHFHIGS IPSTAL
Sbjct: 116 GHFGSTSGEKGKFGLTTIQILRVVRNLRQLGMLDCLQLLHFHIGSQIPSTAL 167
>gi|7488552|pir||T14429 arginine decarboxylase (EC 4.1.1.19) - wild cabbage
(fragment) >gi|3421190|gb|AAC68528.1| (AF045683) arginine
decarboxylase [Brassica oleracea]
Length = 401
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 401
0 150 300
Plus Strand HSPs:
Score = 220 (77.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 43/52 (82%), Positives = 44/52 (84%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+ L GMLDCLQLLHFHIGS IPSTAL
Sbjct: 116 GHFGSTSGEKGKFGLTTIQILRVVRNLRQLGMLDCLQLLHFHIGSQIPSTAL 167
>gi|3421202|gb|AAC68531.1| (AF045686) arginine decarboxylase [Sisymbrium
altissimum]
Length = 403
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 403
0 150 300
Plus Strand HSPs:
Score = 220 (77.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 43/52 (82%), Positives = 44/52 (84%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+ L GMLDCLQLLHFHIGS IPSTAL
Sbjct: 116 GHFGSTSGEKGKFGLTTIQILRVVRNLRQLGMLDCLQLLHFHIGSQIPSTAL 167
>gi|3421206|gb|AAC68532.1| (AF045687) arginine decarboxylase [Stanleya pinnata]
Length = 403
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 403
0 150 300
Plus Strand HSPs:
Score = 220 (77.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 43/52 (82%), Positives = 44/52 (84%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+ L GMLDCLQLLHFHIGS IPSTAL
Sbjct: 116 GHFGSTSGEKGKFGLTTIQILRVVRNLRQLGMLDCLQLLHFHIGSQIPSTAL 167
>gi|1711492|sp|P49726|SPE1_LYCES ARGININE DECARBOXYLASE (ARGDC) (ADC)
>gi|478412|pir||JQ2341 arginine decarboxylase (EC 4.1.1.19) -
tomato >gi|295350|gb|AAA61347.1| (L16582) arginine decarboxylase
[Lycopersicon esculentum]
Length = 502
Frame 1 hits (HSPs): ______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 502
0 150 300 450
__________________
Annotated Domains:
DOMO DM03871: ORN/DAP/ARGDECARBOXYLASESFAMILY 1..501
Entrez Domain: SUBSTRATE-BINDING (BY SIMILARITY 226..236
PFAM Orn_DAP_Arg_deC: Pyridoxal-dependent dec 5..325
PFAM Orn_DAP_Arg_deC: Pyridoxal-dependent dec 393..484
PRINTS ARGDCRBXLASE1: Arginine decarboxylase mo 7..22
PRINTS ARGDCRBXLASE2: Arginine decarboxylase mo 31..45
PRINTS ODADCRBXLASE1: ODA decarboxylase motif I 39..57
PRINTS ODADCRBXLASE2: ODA decarboxylase motif I 63..75
PRINTS ARGDCRBXLASE3: Arginine decarboxylase mo 89..104
PRINTS ARGDCRBXLASE4: Arginine decarboxylase mo 115..136
PRINTS ARGDCRBXLASE5: Arginine decarboxylase mo 139..161
PRINTS ODADCRBXLASE3: ODA decarboxylase motif I 182..195
PRINTS ARGDCRBXLASE6: Arginine decarboxylase mo 267..284
PRINTS ODADCRBXLASE4: ODA decarboxylase motif I 277..296
PRINTS ARGDCRBXLASE7: Arginine decarboxylase mo 394..415
PRINTS ARGDCRBXLASE8: Arginine decarboxylase mo 419..444
PRINTS ARGDCRBXLASE9: Arginine decarboxylase mo 471..492
PRINTS ODADCRBXLASE5: ODA decarboxylase motif V 471..484
PRODOM PD005382: SPE1(5) 1..37
PRODOM PD001258: DCOR(15) DCDA(12) SPE1(5) 39..294
PRODOM PD005416: SPE1(5) 296..501
PROSITE ODR_DC_2_1: Orn/DAP/Arg decarboxylases f 39..57
PROSITE ODR_DC_2_2: Orn/DAP/Arg decarboxylases f 220..233
__________________
Plus Strand HSPs:
Score = 222 (78.1 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 43/52 (82%), Positives = 45/52 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVVKKL +GMLDCLQLLHFHIGS IP+T L
Sbjct: 150 GHFGSTSGEKGKFGLTTTQILRVVKKLDESGMLDCLQLLHFHIGSQIPTTEL 201
>gi|3421140|gb|AAC68513.1| (AF045668) arginine decarboxylase [Polanisia
dodecandra]
Length = 408
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 408
0 150 300
Plus Strand HSPs:
Score = 219 (77.1 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 42/52 (80%), Positives = 44/52 (84%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GL T QI+RVV+KL GMLDCLQLLHFHIGS IPSTAL
Sbjct: 116 GHFGSTSGEKGKFGLNTIQIVRVVRKLCQVGMLDCLQLLHFHIGSQIPSTAL 167
>gi|12229969|sp|O82475|SPE1_BRAJU ARGININE DECARBOXYLASE (ARGDC) (ADC)
>gi|3342902|gb|AAC62017.1| (AF077547) arginine decarboxylase
[Brassica juncea]
Length = 702
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 702
0 150 300 450 600
Plus Strand HSPs:
Score = 224 (78.9 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 43/52 (82%), Positives = 45/52 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RVV+KL GMLDCLQLLHFHIGS IPSTAL
Sbjct: 249 GHFGSTSGEKGKFGLTTVQIIRVVRKLRDVGMLDCLQLLHFHIGSQIPSTAL 300
>gi|7230375|gb|AAF42972.1|AF127241_1 (AF127241) arginine decarboxylase 2
[Nicotiana tabacum]
Length = 721
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 721
0 150 300 450 600
Plus Strand HSPs:
Score = 224 (78.9 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 43/52 (82%), Positives = 45/52 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RVVKKL +GMLDCLQLLHFHIGS IPST L
Sbjct: 261 GHFGSTSGEKGKFGLTTTQIVRVVKKLEESGMLDCLQLLHFHIGSQIPSTGL 312
>gi|6646840|emb|CAB64599.1| (AJ251898) arginine decarboxylase 1 [Datura
stramonium]
Length = 724
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 724
0 150 300 450 600
Plus Strand HSPs:
Score = 224 (78.9 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 44/52 (84%), Positives = 45/52 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVVKKL +GMLDCLQLLHFHIGS IPST L
Sbjct: 265 GHFGSTSGEKGKFGLTTTQILRVVKKLDESGMLDCLQLLHFHIGSQIPSTDL 316
>gi|12229960|sp|O23141|SPE2_ARATH ARGININE DECARBOXYLASE 2 (ARGDC 2) (ADC 2)
(ADC-N) >gi|7436499|pir||T05291 arginine decarboxylase (EC
4.1.1.19) SPE2 - Arabidopsis thaliana >gi|2271485|gb|AAB72179.1|
(AF009647) arginine decarboxylase [Arabidopsis thaliana]
>gi|3096940|emb|CAA18850.1| (AL023094) arginine decarboxylase SPE2
[Arabidopsis thaliana] >gi|7270422|emb|CAB80188.1| (AL161586)
arginine decarboxylase SPE2 [Arabidopsis thaliana]
Length = 711
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 711
0 150 300 450 600
Plus Strand HSPs:
Score = 222 (78.1 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 42/52 (80%), Positives = 46/52 (88%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RVV+KL +GMLDCLQLLHFHIGS IPST+L
Sbjct: 255 GHFGSTSGEKGKFGLTTTQIVRVVRKLRQSGMLDCLQLLHFHIGSQIPSTSL 306
>gi|7436503|pir||T10709 arginine decarboxylase (EC 4.1.1.19) ADC8 - clove pink
>gi|2183223|gb|AAB60880.1| (AF002017) arginine decarboxylase
[Dianthus caryophyllus]
Length = 725
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 725
0 150 300 450 600
Plus Strand HSPs:
Score = 221 (77.8 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 43/52 (82%), Positives = 45/52 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+KL GMLDCLQLLHFHIGS IP+TAL
Sbjct: 264 GHFGSTSGEKGKFGLTTTQILRVVRKLESFGMLDCLQLLHFHIGSQIPTTAL 315
>gi|3915016|sp|Q96412|SPE1_DIACA ARGININE DECARBOXYLASE (ARGDC) (ADC)
>gi|7436504|pir||T10721 arginine decarboxylase (EC 4.1.1.19) ADC -
clove pink >gi|1575499|gb|AAB67887.1| (U63832) arginine
decarboxylase [Dianthus caryophyllus]
Length = 725
Frame 1 hits (HSPs): ____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 725
0 150 300 450 600
__________________
Annotated Domains:
Entrez Domain: SUBSTRATE-BINDING (BY SIMILARITY 340..350
PFAM Orn_DAP_Arg_deC: Pyridoxal-dependent dec 119..407
PFAM Orn_DAP_Arg_deC: Pyridoxal-dependent dec 508..597
PRINTS ARGDCRBXLASE1: Arginine decarboxylase mo 121..136
PRINTS ARGDCRBXLASE2: Arginine decarboxylase mo 145..159
PRINTS ODADCRBXLASE1: ODA decarboxylase motif I 153..171
PRINTS ODADCRBXLASE2: ODA decarboxylase motif I 177..189
PRINTS ARGDCRBXLASE3: Arginine decarboxylase mo 203..218
PRINTS ARGDCRBXLASE4: Arginine decarboxylase mo 229..250
PRINTS ARGDCRBXLASE5: Arginine decarboxylase mo 253..275
PRINTS ODADCRBXLASE3: ODA decarboxylase motif I 296..309
PRINTS ARGDCRBXLASE6: Arginine decarboxylase mo 381..398
PRINTS ODADCRBXLASE4: ODA decarboxylase motif I 391..410
PRINTS ARGDCRBXLASE7: Arginine decarboxylase mo 509..530
PRINTS ARGDCRBXLASE8: Arginine decarboxylase mo 534..559
PRINTS ARGDCRBXLASE9: Arginine decarboxylase mo 584..605
PRINTS ODADCRBXLASE5: ODA decarboxylase motif V 584..597
PRODOM PD013710: SPE1(3) O04429(1) O64453(1) 1..56
PRODOM PD006917: SPE1(4) 58..112
PRODOM PD005382: SPE1(5) 115..151
PRODOM PD001258: DCOR(15) DCDA(12) SPE1(5) 153..408
PRODOM PD005416: SPE1(5) 410..614
PRODOM PD011502: SPE1(3) 616..673
PRODOM PD039456: O04429(1) SPE1(1) 675..724
PROSITE ODR_DC_2_1: Orn/DAP/Arg decarboxylases f 153..171
PROSITE ODR_DC_2_2: Orn/DAP/Arg decarboxylases f 334..347
__________________
Plus Strand HSPs:
Score = 219 (77.1 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 42/52 (80%), Positives = 45/52 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+KL + GMLDCLQLLHFHIGS IP+T L
Sbjct: 264 GHFGSTSGEKGKFGLTTTQILRVVRKLENFGMLDCLQLLHFHIGSQIPTTTL 315
>gi|3421157|gb|AAC68518.1| (AF045673) arginine decarboxylase [Capsella
bursa-pastoris]
Length = 407
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 407
0 150 300
Plus Strand HSPs:
Score = 212 (74.6 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 41/52 (78%), Positives = 46/52 (88%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RVV+KL+ +GMLD LQLLHFHIGS IPST+L
Sbjct: 116 GHFGSTSGEKGKFGLTTTQIVRVVRKLSQSGMLDRLQLLHFHIGSQIPSTSL 167
>gi|2347054|emb|CAA65585.1| (X96791) arginine decarboxylase [Vitis vinifera]
Length = 630
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 630
0 150 300 450 600
Plus Strand HSPs:
Score = 215 (75.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 43/52 (82%), Positives = 44/52 (84%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QILRVV+KL AGMLD LQLLHFHIGS IPST L
Sbjct: 175 GHFGSTSGEKGKFGLTTTQILRVVRKLEQAGMLDSLQLLHFHIGSQIPSTDL 226
>gi|3421147|gb|AAC68515.1| (AF045670) arginine decarboxylase [Barbarea
vulgaris]
Length = 407
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 407
0 150 300
Plus Strand HSPs:
Score = 210 (73.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 41/52 (78%), Positives = 45/52 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RVV KL+ +GMLD LQLLHFHIGS IPST+L
Sbjct: 116 GHFGSTSGEKGKFGLTTTQIVRVVSKLSQSGMLDRLQLLHFHIGSQIPSTSL 167
>gi|6715490|gb|AAF26434.1| (AF220097) arginine decarboxylase [Brassica juncea]
Length = 692
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 692
0 150 300 450 600
Plus Strand HSPs:
Score = 213 (75.0 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 41/52 (78%), Positives = 45/52 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RVV++L + MLDCLQLLHFHIGS IPSTAL
Sbjct: 244 GHFGSTSGEKGKFGLTTGQIVRVVRRLRESCMLDCLQLLHFHIGSQIPSTAL 295
>gi|12229999|sp|Q9SNN0|SPE1_ORYSA ARGININE DECARBOXYLASE (ARGDC) (ADC)
>gi|6006369|dbj|BAA84799.1| (AP000559) ESTs
C99670(E21043),C99671(E21043),
AU078262(R10938),AU078261(R10938),D15282(C0402) correspond to a
region of the predicted gene.; Similar to arginine decarboxylase
(U52851) [Oryza sativa]
Length = 702
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 702
0 150 300 450 600
Plus Strand HSPs:
Score = 206 (72.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 41/52 (78%), Positives = 42/52 (80%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GL AQIL VV KL GMLDCLQLLHFHIGS IP+TAL
Sbjct: 260 GHFGSTSGEKGKFGLNAAQILSVVAKLKTLGMLDCLQLLHFHIGSQIPTTAL 311
>gi|3914997|sp|Q43075|SPE1_PEA ARGININE DECARBOXYLASE (ARGDC) (ADC)
>gi|2129876|pir||S59553 arginine decarboxylase (EC 4.1.1.19) -
garden pea >gi|609220|emb|CAA85773.1| (Z37540) arginine
decarboxylase [Pisum sativum]
Length = 728
Frame 1 hits (HSPs): ____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 728
0 150 300 450 600
__________________
Annotated Domains:
Entrez Domain: SUBSTRATE-BINDING (BY SIMILARITY 345..355
PFAM Orn_DAP_Arg_deC: Pyridoxal-dependent dec 124..412
PFAM Orn_DAP_Arg_deC: Pyridoxal-dependent dec 511..601
PRINTS ARGDCRBXLASE1: Arginine decarboxylase mo 126..141
PRINTS ARGDCRBXLASE2: Arginine decarboxylase mo 150..164
PRINTS ODADCRBXLASE1: ODA decarboxylase motif I 158..176
PRINTS ODADCRBXLASE2: ODA decarboxylase motif I 182..194
PRINTS ARGDCRBXLASE3: Arginine decarboxylase mo 208..223
PRINTS ARGDCRBXLASE4: Arginine decarboxylase mo 234..255
PRINTS ARGDCRBXLASE5: Arginine decarboxylase mo 258..280
PRINTS ODADCRBXLASE3: ODA decarboxylase motif I 301..314
PRINTS ARGDCRBXLASE6: Arginine decarboxylase mo 386..403
PRINTS ODADCRBXLASE4: ODA decarboxylase motif I 396..415
PRINTS ARGDCRBXLASE7: Arginine decarboxylase mo 512..533
PRINTS ARGDCRBXLASE8: Arginine decarboxylase mo 537..562
PRINTS ARGDCRBXLASE9: Arginine decarboxylase mo 588..609
PRINTS ODADCRBXLASE5: ODA decarboxylase motif V 588..601
PRODOM PD013710: SPE1(3) O04429(1) O64453(1) 1..61
PRODOM PD006917: SPE1(4) 64..118
PRODOM PD005382: SPE1(5) 120..156
PRODOM PD001258: DCOR(15) DCDA(12) SPE1(5) 158..413
PRODOM PD005416: SPE1(5) 415..618
PRODOM PD011502: SPE1(3) 620..684
PRODOM PD123392: SPE1_PEA 686..727
PROSITE ODR_DC_2_1: Orn/DAP/Arg decarboxylases f 158..176
PROSITE ODR_DC_2_2: Orn/DAP/Arg decarboxylases f 339..352
__________________
Plus Strand HSPs:
Score = 205 (72.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 40/52 (76%), Positives = 42/52 (80%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSG+KGK GLTT QIL VVKKL MLDCLQLLHFHIGS IP+T L
Sbjct: 269 GHFGATSGDKGKFGLTTIQILHVVKKLEQLDMLDCLQLLHFHIGSQIPTTEL 320
>gi|3915009|sp|Q39827|SPE1_SOYBN ARGININE DECARBOXYLASE (ARGDC) (ADC)
>gi|7436498|pir||T06593 arginine decarboxylase (EC 4.1.1.19) -
soybean >gi|1163181|gb|AAD09204.1| (U35367) arginine decarboxylase
[Glycine max]
Length = 692
Frame 1 hits (HSPs): _____
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 692
0 150 300 450 600
__________________
Annotated Domains:
Entrez Domain: SUBSTRATE-BINDING (BY SIMILARITY 337..347
PFAM Orn_DAP_Arg_deC: Pyridoxal-dependent dec 117..403
PFAM Orn_DAP_Arg_deC: Pyridoxal-dependent dec 491..588
PRINTS ARGDCRBXLASE1: Arginine decarboxylase mo 118..133
PRINTS ARGDCRBXLASE2: Arginine decarboxylase mo 142..156
PRINTS ODADCRBXLASE1: ODA decarboxylase motif I 150..168
PRINTS ODADCRBXLASE2: ODA decarboxylase motif I 174..186
PRINTS ARGDCRBXLASE3: Arginine decarboxylase mo 200..215
PRINTS ARGDCRBXLASE4: Arginine decarboxylase mo 226..247
PRINTS ARGDCRBXLASE5: Arginine decarboxylase mo 250..272
PRINTS ODADCRBXLASE3: ODA decarboxylase motif I 293..306
PRINTS ARGDCRBXLASE6: Arginine decarboxylase mo 377..394
PRINTS ODADCRBXLASE4: ODA decarboxylase motif I 387..406
PRINTS ARGDCRBXLASE7: Arginine decarboxylase mo 500..521
PRINTS ARGDCRBXLASE8: Arginine decarboxylase mo 525..550
PRINTS ARGDCRBXLASE9: Arginine decarboxylase mo 575..596
PRINTS ODADCRBXLASE5: ODA decarboxylase motif V 575..588
PRODOM PD013710: SPE1(3) O04429(1) O64453(1) 1..53
PRODOM PD006917: SPE1(4) 56..110
PRODOM PD005382: SPE1(5) 112..148
PRODOM PD001258: DCOR(15) DCDA(12) SPE1(5) 150..404
PRODOM PD005416: SPE1(5) 406..605
PRODOM PD011502: SPE1(3) 607..665
PROSITE ODR_DC_2_1: Orn/DAP/Arg decarboxylases f 150..168
PROSITE ODR_DC_2_2: Orn/DAP/Arg decarboxylases f 331..344
__________________
Plus Strand HSPs:
Score = 202 (71.1 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 40/52 (76%), Positives = 43/52 (82%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFGG +GK GLTTA++LRVVK L AGMLDCLQLLHFHIGS IPSTAL
Sbjct: 261 GHFGGIFRRRGKFGLTTARVLRVVKNLDLAGMLDCLQLLHFHIGSQIPSTAL 312
>gi|6715492|gb|AAF26435.1| (AF220098) arginine decarboxylase [Brassica juncea]
Length = 680
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 680
0 150 300 450 600
Plus Strand HSPs:
Score = 165 (58.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 35/52 (67%), Positives = 38/52 (73%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
GHFG TSGEKGK GLTT QI+RVV+KL L LHFHIGS IPST+L
Sbjct: 245 GHFGSTSGEKGKFGLTTTQIVRVVRKLV---CLTVSSFLHFHIGSQIPSTSL 293
>gi|134804|sp|P22220|SPE1_AVESA ARGININE DECARBOXYLASE (ARGDC) (ADC)
>gi|100543|pir||S12265 arginine decarboxylase (EC 4.1.1.19) - oat
>gi|16120|emb|CAA40137.1| (X56802) arginine decarboxylase [Avena
sativa]
Length = 607
Frame 1 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | || 607
0 150 300 450 600
__________________
Annotated Domains:
DOMO DM03871: ORN/DAP/ARGDECARBOXYLASESFAMILY 57..541
Entrez Domain: SUBSTRATE-BINDING (BY SIMILARITY 290..300
PFAM Orn_DAP_Arg_deC: Pyridoxal-dependent dec 67..524
PRINTS ARGDCRBXLASE1: Arginine decarboxylase mo 69..84
PRINTS ARGDCRBXLASE2: Arginine decarboxylase mo 93..107
PRINTS ODADCRBXLASE1: ODA decarboxylase motif I 101..119
PRINTS ODADCRBXLASE2: ODA decarboxylase motif I 125..137
PRINTS ARGDCRBXLASE3: Arginine decarboxylase mo 151..166
PRINTS ARGDCRBXLASE4: Arginine decarboxylase mo 177..198
PRINTS ARGDCRBXLASE5: Arginine decarboxylase mo 201..223
PRINTS ODADCRBXLASE3: ODA decarboxylase motif I 244..257
PRINTS ARGDCRBXLASE6: Arginine decarboxylase mo 331..348
PRINTS ODADCRBXLASE4: ODA decarboxylase motif I 341..360
PRINTS ARGDCRBXLASE7: Arginine decarboxylase mo 435..456
PRINTS ARGDCRBXLASE8: Arginine decarboxylase mo 460..485
PRINTS ARGDCRBXLASE9: Arginine decarboxylase mo 511..532
PRINTS ODADCRBXLASE5: ODA decarboxylase motif V 511..524
PRODOM PD006917: SPE1(4) 8..62
PRODOM PD005382: SPE1(5) 64..99
PRODOM PD001258: DCOR(15) DCDA(12) SPE1(5) 101..353
PRODOM PD214554: SPE1_AVESA 355..416
PRODOM PD005416: SPE1(5) 418..540
PRODOM PD123388: SPE1_AVESA 542..606
PROSITE ODR_DC_2_1: Orn/DAP/Arg decarboxylases f 101..119
__________________
Plus Strand HSPs:
Score = 138 (48.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 27/50 (54%), Positives = 33/50 (66%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPST 153
GHFG T+G+ GK GL +I V KKL L L+LLHFH+GS IP+T
Sbjct: 212 GHFGSTAGKHGKFGLPAEKIYEVAKKLKALNKLHWLKLLHFHVGSMIPTT 261
>gi|4581934|gb|AAD24801.1|AF132498_1 (AF132498) arginine decarboxylase
[Brassica napus]
Length = 117
Frame 1 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | 117
0 50 100
Plus Strand HSPs:
Score = 120 (42.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 23/30 (76%), Positives = 26/30 (86%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHA 93
GHFG TSGEKGK GLTT QI+RVV+KL+ A
Sbjct: 87 GHFGSTSGEKGKFGLTTTQIVRVVRKLSEA 116
>gi|7436500|pir||S76771 arginine decarboxylase (EC 4.1.1.19) 2 - Synechocystis
sp. (strain PCC 6803) >gi|1653772|dbj|BAA18683.1| (D90916)
arginine decarboxylase [Synechocystis sp.]
Length = 695
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 695
0 150 300 450 600
Plus Strand HSPs:
Score = 129 (45.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 25/52 (48%), Positives = 37/52 (71%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTAL 159
G +G ++G++ K GLT ++L +++L A MLD LQLLHFHIGS I S ++
Sbjct: 256 GRWGISTGDRAKFGLTIPEMLTAIEQLRRADMLDSLQLLHFHIGSQISSISV 307
>gi|134805|sp|P21170|SPEA_ECOLI BIOSYNTHETIC ARGININE DECARBOXYLASE (ADC)
>gi|95665|pir||A37771 arginine decarboxylase (EC 4.1.1.19) -
Escherichia coli >gi|147856|gb|AAA24646.1| (M31770) arginine
decarboxylase [Escherichia coli]
Length = 658
Frame 1 hits (HSPs): ____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 658
0 150 300 450 600
__________________
Annotated Domains:
BLOCKS BL00878A: Orn/DAP/Arg decarboxylases fam 71..87
BLOCKS BL00878B: Orn/DAP/Arg decarboxylases fam 263..277
BLOCKS BL00878C: Orn/DAP/Arg decarboxylases fam 299..318
BLOCKS BL00878D: Orn/DAP/Arg decarboxylases fam 355..373
BLOCKS BL00878E: Orn/DAP/Arg decarboxylases fam 523..532
BLOCKS BL00878F: Orn/DAP/Arg decarboxylases fam 557..579
DOMO DM03871: ORN/DAP/ARGDECARBOXYLASESFAMILY 84..596
Entrez Domain: SUBSTRATE-BINDING (POTENTIAL). 307..317
PFAM Orn_DAP_Arg_deC: Pyridoxal-dependent dec 90..579
PRINTS ARGDCRBXLASE1: Arginine decarboxylase mo 92..107
PRINTS ARGDCRBXLASE2: Arginine decarboxylase mo 116..130
PRINTS ODADCRBXLASE1: ODA decarboxylase motif I 124..142
PRINTS ODADCRBXLASE2: ODA decarboxylase motif I 146..158
PRINTS ARGDCRBXLASE3: Arginine decarboxylase mo 170..185
PRINTS ARGDCRBXLASE4: Arginine decarboxylase mo 196..217
PRINTS ARGDCRBXLASE5: Arginine decarboxylase mo 220..242
PRINTS ODADCRBXLASE3: ODA decarboxylase motif I 263..276
PRINTS ARGDCRBXLASE6: Arginine decarboxylase mo 347..364
PRINTS ODADCRBXLASE4: ODA decarboxylase motif I 357..376
PRINTS ARGDCRBXLASE7: Arginine decarboxylase mo 488..509
PRINTS ARGDCRBXLASE8: Arginine decarboxylase mo 513..538
PRINTS ARGDCRBXLASE9: Arginine decarboxylase mo 566..587
PRINTS ODADCRBXLASE5: ODA decarboxylase motif V 566..579
PRODOM PD115590: SPEA_ECOLI 1..122
PRODOM PD001258: DCOR(15) DCDA(12) SPE1(5) 124..383
PRODOM PD214555: SPEA_ECOLI 385..484
PRODOM PD005416: SPE1(5) 486..586
PRODOM PD123389: SPEA_ECOLI 588..657
PROSITE ODR_DC_2_1: Orn/DAP/Arg decarboxylases f 124..142
PROSITE ODR_DC_2_2: Orn/DAP/Arg decarboxylases f 301..314
__________________
Plus Strand HSPs:
Score = 125 (44.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 24/45 (53%), Positives = 31/45 (68%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGS 138
G + + GEK K GL Q+L++V+ L AG LD LQLLHFH+GS
Sbjct: 231 GKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGS 275
>gi|7428330|pir||A65079 arginine decarboxylase (EC 4.1.1.19) - Escherichia coli
>gi|882467|gb|AAA69105.1| (U28377) CG Site No. 161 [Escherichia
coli] >gi|1789307|gb|AAC75975.1| (AE000377) biosynthetic arginine
decarboxylase [Escherichia coli K12]
Length = 658
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 658
0 150 300 450 600
Plus Strand HSPs:
Score = 125 (44.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 24/45 (53%), Positives = 31/45 (68%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGS 138
G + + GEK K GL Q+L++V+ L AG LD LQLLHFH+GS
Sbjct: 231 GKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGS 275
>gi|12517481|gb|AAG58069.1|AE005524_5 (AE005524) biosynthetic arginine
decarboxylase [Escherichia coli O157:H7]
Length = 658
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 658
0 150 300 450 600
Plus Strand HSPs:
Score = 125 (44.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 24/45 (53%), Positives = 31/45 (68%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGS 138
G + + GEK K GL Q+L++V+ L AG LD LQLLHFH+GS
Sbjct: 231 GKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGS 275
>gi|11267667|pir||A81196 biosynthetic arginine decarboxylase NMB0468 [imported]
- Neisseria meningitidis (group B strain MD58)
>gi|7225695|gb|AAF40905.1| (AE002403) biosynthetic arginine
decarboxylase [Neisseria meningitidis MC58]
Length = 630
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 630
0 150 300 450 600
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 23/47 (48%), Positives = 32/47 (68%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXI 144
G + + GEK K GL+ +Q+L++V L LDCLQLLHFH+GS +
Sbjct: 203 GKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCLQLLHFHLGSQL 249
>gi|11267665|pir||D81831 arginine decarboxylase (EC 4.1.1.19) NMA2017
[imported] - Neisseria meningitidis (group A strain Z2491)
>gi|7380646|emb|CAB85236.1| (AL162757) biosynthetic arginine
decarboxylase [Neisseria meningitidis Z2491]
Length = 630
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 630
0 150 300 450 600
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 23/47 (48%), Positives = 32/47 (68%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXI 144
G + + GEK K GL+ +Q+L++V L LDCLQLLHFH+GS +
Sbjct: 203 GKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCLQLLHFHLGSQL 249
>gi|12721756|gb|AAK03466.1| (AE006176) SpeA [Pasteurella multocida]
Length = 644
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 644
0 150 300 450 600
Plus Strand HSPs:
Score = 122 (42.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/47 (48%), Positives = 32/47 (68%), Frame = +1
Query: 4 GHFGGTSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXI 144
G + + GEK K GL+ +Q+L +V+ L LDCLQLLHFH+GS +
Sbjct: 217 GKWQSSGGEKSKFGLSASQVLSLVQMLKEHECLDCLQLLHFHLGSQL 263
>gi|11347513|pir||H83040 biosynthetic arginine decarboxylase PA4839 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9951109|gb|AAG08224.1|AE004897_2 (AE004897) biosynthetic
arginine decarboxylase [Pseudomonas aeruginosa]
Length = 636
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 636
0 150 300 450 600
Plus Strand HSPs:
Score = 114 (40.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 23/46 (50%), Positives = 32/46 (69%), Frame = +1
Query: 19 TSGEKGKXGLTTAQILRVVKKLAHAGMLDCLQLLHFHIGSXIPSTA 156
T GEK K GL+ AQ+L VV++ AG+ ++LLHFH+GS I + A
Sbjct: 219 TGGEKAKFGLSAAQLLSVVERFRQAGLDQGVRLLHFHMGSQIANLA 264
WARNING: HSPs involving 30 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.79
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.323 0.134 0.449
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.344 0.156 0.613
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.341 0.154 0.537
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.333 0.143 0.465
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.338 0.145 0.538
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.124 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 61 57 10. 58 3 12 22 0.090 30
26 0.084 30
+2 0 61 57 10. 58 3 12 22 0.090 30
26 0.084 30
+1 0 62 59 10. 58 3 12 22 0.095 30
26 0.094 30
-1 0 62 58 10. 58 3 12 22 0.093 30
26 0.089 30
-2 0 61 58 10. 58 3 12 22 0.093 30
26 0.089 30
-3 0 61 57 10. 58 3 12 22 0.11 29
26 0.12 29
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 80
No. of states in DFA: 561 (55 KB)
Total size of DFA: 114 KB (128 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 68.44u 1.22s 69.66t Elapsed: 00:00:14
Total cpu time: 68.49u 1.22s 69.71t Elapsed: 00:00:15
Start: Fri Feb 1 15:41:14 2002 End: Fri Feb 1 15:41:29 2002
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000