| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
67 |
| Archaea |
|
|
6 |
| |
|
|
67 |
| |
Euryarchaeota |
|
6 |
| |
|
Archaeoglobus fulgidus (afu) |
1 |
| |
|
Methanosarcina acetivorans (mac) |
2 |
| |
|
Methanosarcina barkeri (mba) |
1 |
| |
|
Uncultured methanogenic archaeon RC-I (rci) |
1 |
| |
|
Thermococcus kodakaraensis (tko) |
1 |
| Bacteria |
|
|
3912 |
| |
Acidobacteria |
|
3 |
| |
|
Acidobacteria bacterium (aba) |
2 |
| |
|
Solibacter usitatus (sus) |
1 |
| |
Actinobacteria |
|
39 |
| |
|
Arthrobacter aurescens (aau) |
4 |
| |
|
Arthrobacter sp. FB24 (art) |
1 |
| |
|
Corynebacterium efficiens (cef) |
1 |
| |
|
Frankia alni (fal) |
5 |
| |
|
Frankia sp. EAN1pec (fre) |
1 |
| |
|
Mycobacterium sp. JLS (mjl) |
1 |
| |
|
Mycobacterium sp. KMS (mkm) |
2 |
| |
|
Mycobacterium avium paratuberculosis (mpa) |
1 |
| |
|
Mycobacterium vanbaalenii (mva) |
1 |
| |
|
Nocardioides sp. JS614 (nca) |
4 |
| |
|
Rhodococcus sp. RHA1 (rha) |
2 |
| |
|
Rubrobacter xylanophilus (rxy) |
5 |
| |
|
Salinispora arenicola (saq) |
2 |
| |
|
Streptomyces coelicolor (sco) |
3 |
| |
|
Saccharopolyspora erythraea (sen) |
5 |
| |
|
Streptomyces avermitilis (sma) |
1 |
| |
Bacteroides |
|
2 |
| |
|
Gramella forsetii (gfo) |
1 |
| |
|
Parabacteroides distasonis (pdi) |
1 |
| |
Cyanobacteria |
|
16 |
| |
|
Acaryochloris marina (amr) |
1 |
| |
|
Anabaena sp. PCC7120 (ana) |
3 |
| |
|
Anabaena variabilis (ava) |
2 |
| |
|
Cyanobacteria Yellowstone A-Prime (cya) |
1 |
| |
|
Cyanobacteria Yellowstone B-Prime (cyb) |
1 |
| |
|
Gloeobacter violaceus (gvi) |
1 |
| |
|
Synechococcus sp. CC9902 (sye) |
1 |
| |
|
Synechococcus elongatus PCC7942 (syf) |
1 |
| |
|
Synechocystis sp. PCC6803 (syn) |
1 |
| |
|
Trichodesmium erythraeum (ter) |
4 |
| |
Deinococcus-Thermus |
|
7 |
| |
|
Deinococcus geothermalis (dge) |
1 |
| |
|
Deinococcus radiodurans (dra) |
5 |
| |
|
Thermus thermophilus HB27 (tth) |
1 |
| |
Firmicutes |
|
20 |
| |
|
Bacillus amyloliquefaciens (bay) |
1 |
| |
|
Bacillus halodurans (bha) |
3 |
| |
|
Bacillus licheniformis DSM13 (bld) |
1 |
| |
|
Clostridium acetobutylicum (cac) |
1 |
| |
|
Clostridium difficile (cdf) |
1 |
| |
|
Caldicellulosiruptor saccharolyticus (csc) |
1 |
| |
|
Clostridium thermocellum (cth) |
4 |
| |
|
Geobacillus thermodenitrificans (gtn) |
3 |
| |
|
Listeria monocytogenes EGD-e (lmo) |
1 |
| |
|
Moorella thermoacetica (mta) |
1 |
| |
|
Streptococcus thermophilus LMD-9 (ste) |
1 |
| |
|
Symbiobacterium thermophilum (sth) |
2 |
| |
Green nonsulfur bacteria |
|
6 |
| |
|
Herpetosiphon aurantiacus (hau) |
1 |
| |
|
Roseiflexus castenholzii DSM13941 (rca) |
2 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
3 |
| |
Green sulfur bacteria |
|
5 |
| |
|
Chlorobium chlorochromatii (cch) |
2 |
| |
|
Chlorobium phaeobacteroides (cph) |
1 |
| |
|
Chlorobaculum tepidum (cte) |
2 |
| |
Planctomyces |
|
3 |
| |
|
Rhodopirellula baltica (rba) |
3 |
| |
Proteobacteria |
|
3811 |
| |
|
Acidovorax avenae (aav) |
6 |
| |
|
Alcanivorax borkumensis (abo) |
1 |
| |
|
Acinetobacter baumannii (acb) |
2 |
| |
|
Acinetobacter sp. ADP1 (aci) |
2 |
| |
|
Acidiphilium cryptum JF-5 (acr) |
23 |
| |
|
Anaeromyxobacter dehalogenans (ade) |
5 |
| |
|
Alkalilimnicola ehrlichei (aeh) |
11 |
| |
|
Anaeromyxobacter sp. Fw109-5 (afw) |
3 |
| |
|
Acidovorax sp. JS42 (ajs) |
5 |
| |
|
Aeromonas salmonicida (asa) |
2 |
| |
|
Actinobacillus succinogenes (asu) |
1 |
| |
|
Agrobacterium tumefaciens C58 (Cereon) (atc) |
59 |
| |
|
Agrobacterium tumefaciens C58 (UWash/Dupont) (atu) |
4 |
| |
|
Azorhizobium caulinodans (azc) |
38 |
| |
|
Azoarcus sp. BH72 (azo) |
13 |
| |
|
Burkholderia cepacia (bam) |
4 |
| |
|
Bdellovibrio bacteriovorus (bba) |
2 |
| |
|
Bordetella bronchiseptica (bbr) |
4 |
| |
|
Bradyrhizobium sp. BTAi1 (bbt) |
13 |
| |
|
Burkholderia cenocepacia HI2424 (bch) |
4 |
| |
|
Burkholderia cenocepacia AU1054 (bcn) |
1 |
| |
|
Bradyrhizobium japonicum (bja) |
29 |
| |
|
Brucella abortus (bmb) |
5 |
| |
|
Brucella melitensis (bme) |
1 |
| |
|
Burkholderia mallei NCTC 10229 (bml) |
1 |
| |
|
Burkholderia mallei NCTC 10247 (bmn) |
2 |
| |
|
Brucella suis (bms) |
3 |
| |
|
Brucella ovis (bov) |
12 |
| |
|
Burkholderia pseudomallei 668 (bpd) |
1 |
| |
|
Bordetella pertussis (bpe) |
1 |
| |
|
Burkholderia pseudomallei K96243 (bps) |
1 |
| |
|
Bradyrhizobium sp. ORS278 (bra) |
15 |
| |
|
Burkholderia thailandensis (bte) |
4 |
| |
|
Burkholderia sp. 383 (bur) |
3 |
| |
|
Burkholderia vietnamiensis (bvi) |
7 |
| |
|
Burkholderia xenovorans (bxe) |
16 |
| |
|
Caulobacter crescentus (ccr) |
12 |
| |
|
Campylobacter jejuni subsp. doylei 269.97 (cjd) |
1 |
| |
|
Chromohalobacter salexigens (csa) |
7 |
| |
|
Chromobacterium violaceum (cvi) |
5 |
| |
|
Delftia acidovorans (dac) |
6 |
| |
|
Dechloromonas aromatica (dar) |
6 |
| |
|
Desulfovibrio desulfuricans (dde) |
1 |
| |
|
Desulfotalea psychrophila (dps) |
1 |
| |
|
Dinoroseobacter shibae (dsh) |
525 |
| |
|
Desulfovibrio vulgaris DP4 (dvl) |
2 |
| |
|
Desulfovibrio vulgaris Hildenborough (dvu) |
1 |
| |
|
Azoarcus sp. EbN1 (eba) |
5 |
| |
|
Escherichia coli CFT073 (UPEC) (ecc) |
1 |
| |
|
Escherichia coli APEC O1 (ecv) |
4 |
| |
|
Erythrobacter litoralis (eli) |
2 |
| |
|
Enterobacter sp. 638 (ent) |
1 |
| |
|
Enterobacter sakazakii (esa) |
1 |
| |
|
Granulobacter bethesdensis (gbe) |
4 |
| |
|
Geobacter metallireducens (gme) |
1 |
| |
|
Gluconobacter oxydans (gox) |
2 |
| |
|
Geobacter sulfurreducens (gsu) |
2 |
| |
|
Herminiimonas arsenicoxydans (har) |
3 |
| |
|
Hahella chejuensis (hch) |
4 |
| |
|
Halorhodospira halophila (hha) |
4 |
| |
|
Hyphomonas neptunium (hne) |
11 |
| |
|
Jannaschia sp. CCS1 (jan) |
190 |
| |
|
Klebsiella pneumoniae (kpn) |
5 |
| |
|
Legionella pneumophila Corby (lpc) |
2 |
| |
|
Legionella pneumophila Paris (lpp) |
1 |
| |
|
Magnetospirillum magneticum (mag) |
24 |
| |
|
Marinobacter aquaeolei (maq) |
8 |
| |
|
Methylococcus capsulatus (mca) |
4 |
| |
|
Mesorhizobium sp. BNC1 (mes) |
83 |
| |
|
Methylobacillus flagellatus (mfa) |
1 |
| |
|
Magnetococcus sp. MC-1 (mgm) |
2 |
| |
|
Mesorhizobium loti (mlo) |
82 |
| |
|
Minibacterium massiliensis (mms) |
1 |
| |
|
Marinomonas sp. MWYL1 (mmw) |
14 |
| |
|
Methylibium petroleiphilum (mpt) |
6 |
| |
|
Myxococcus xanthus (mxa) |
5 |
| |
|
Novosphingobium aromaticivorans (nar) |
19 |
| |
|
Nitrosomonas eutropha (net) |
2 |
| |
|
Nitrosomonas europaea (neu) |
2 |
| |
|
Nitrobacter hamburgensis (nha) |
15 |
| |
|
Neisseria meningitidis FAM18 (nmc) |
1 |
| |
|
Nitrosospira multiformis (nmu) |
1 |
| |
|
Nitrosococcus oceani (noc) |
10 |
| |
|
Nitrobacter winogradskyi (nwi) |
5 |
| |
|
Ochrobactrum anthropi (oan) |
44 |
| |
|
Pseudomonas aeruginosa PAO1 (pae) |
6 |
| |
|
Pseudomonas aeruginosa PA7 (pap) |
7 |
| |
|
Pseudomonas aeruginosa UCBPP-PA14 (pau) |
3 |
| |
|
Pelobacter carbinolicus (pca) |
3 |
| |
|
Psychrobacter cryohalolentis (pcr) |
1 |
| |
|
Paracoccus denitrificans (pde) |
860 |
| |
|
Pseudomonas entomophila (pen) |
8 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
4 |
| |
|
Pseudomonas fluorescens PfO-1 (pfo) |
3 |
| |
|
Pseudoalteromonas haloplanktis (pha) |
1 |
| |
|
Psychromonas ingrahamii (pin) |
2 |
| |
|
Parvibaculum lavamentivorans (pla) |
10 |
| |
|
Photorhabdus luminescens (plu) |
1 |
| |
|
Pseudomonas mendocina (pmy) |
5 |
| |
|
Polaromonas naphthalenivorans (pna) |
7 |
| |
|
Polynucleobacter sp. QLW-P1DMWA-1 (pnu) |
1 |
| |
|
Polaromonas sp. JS666 (pol) |
6 |
| |
|
Pelobacter propionicus (ppd) |
1 |
| |
|
Pseudomonas putida F1 (ppf) |
2 |
| |
|
Photobacterium profundum (ppr) |
4 |
| |
|
Pseudomonas putida KT2440 (ppu) |
6 |
| |
|
Pseudomonas stutzeri (psa) |
10 |
| |
|
Pseudomonas syringae pv. syringae B728a (psb) |
4 |
| |
|
Pseudomonas syringae pv. tomato DC3000 (pst) |
2 |
| |
|
Roseobacter denitrificans (rde) |
236 |
| |
|
Ralstonia eutropha H16 (reh) |
2 |
| |
|
Rhizobium etli (ret) |
40 |
| |
|
Ralstonia eutropha JMP134 (reu) |
6 |
| |
|
Rhodoferax ferrireducens (rfr) |
8 |
| |
|
Rhizobium leguminosarum (rle) |
39 |
| |
|
Ralstonia metallidurans (rme) |
2 |
| |
|
Rhodopseudomonas palustris CGA009 (rpa) |
11 |
| |
|
Rhodopseudomonas palustris HaA2 (rpb) |
20 |
| |
|
Rhodopseudomonas palustris BisB18 (rpc) |
17 |
| |
|
Rhodopseudomonas palustris BisB5 (rpd) |
14 |
| |
|
Rhodopseudomonas palustris BisA53 (rpe) |
19 |
| |
|
Rhodospirillum rubrum (rru) |
31 |
| |
|
Ralstonia solanacearum (rso) |
5 |
| |
|
Sphingopyxis alaskensis (sal) |
7 |
| |
|
Syntrophus aciditrophicus (sat) |
2 |
| |
|
Saccharophagus degradans (sde) |
3 |
| |
|
Shigella dysenteriae (sdy) |
1 |
| |
|
Shigella flexneri 301 (serotype 2a) (sfl) |
1 |
| |
|
Shewanella frigidimarina (sfr) |
2 |
| |
|
Shigella flexneri 8401 (serotype 5b) (sfv) |
1 |
| |
|
Shigella flexneri 2457T (serotype 2a) (sfx) |
1 |
| |
|
Sodalis glossinidius (sgl) |
1 |
| |
|
Silicibacter pomeroyi (sil) |
505 |
| |
|
Silicibacter sp. TM1040 (sit) |
208 |
| |
|
Shewanella loihica (slo) |
4 |
| |
|
Sinorhizobium medicae (smd) |
75 |
| |
|
Sinorhizobium meliloti (sme) |
66 |
| |
|
Shewanella oneidensis (son) |
1 |
| |
|
Salmonella typhimurium LT2 (stm) |
2 |
| |
|
Salmonella enterica serovar Typhi CT18 (sty) |
1 |
| |
|
Sphingomonas wittichii (swi) |
22 |
| |
|
Thiobacillus denitrificans (tbd) |
1 |
| |
|
Thiomicrospira crunogena (tcx) |
1 |
| |
|
Vibrio cholerae O395 (vco) |
1 |
| |
|
Verminephrobacter eiseniae (vei) |
14 |
| |
|
Vibrio fischeri (vfi) |
1 |
| |
|
Vibrio parahaemolyticus (vpa) |
1 |
| |
|
Vibrio vulnificus CMCP6 (vvu) |
1 |
| |
|
Vibrio vulnificus YJ016 (vvy) |
1 |
| |
|
Xanthomonas axonopodis (xac) |
1 |
| |
|
Xanthobacter autotrophicus (xau) |
19 |
| |
|
Xanthomonas campestris pv. campestris 8004 (xcb) |
3 |
| |
|
Xanthomonas campestris pv. campestris ATCC 33913 (xcc) |
2 |
| |
|
Xanthomonas campestris pv. vesicatoria (xcv) |
1 |
| |
|
Xanthomonas oryzae MAFF311018 (xom) |
1 |
| |
|
Xanthomonas oryzae KACC10331 (xoo) |
3 |
| |
|
Yersinia pseudotuberculosis IP31758 (ypi) |
1 |
| |
|
Zymomonas mobilis (zmo) |
6 |
| Eukaryotes |
|
|
15 |
| |
Animals |
|
5 |
| |
|
Drosophila pseudoobscura (dpo) |
1 |
| |
|
Gallus gallus (chicken) (gga) |
1 |
| |
|
Macaca mulatta (rhesus monkey) (mcc) |
1 |
| |
|
Nematostella vectensis (sea anemone) (nve) |
2 |
| |
Fungi |
|
2 |
| |
|
Aspergillus nidulans (ani) |
1 |
| |
|
Yarrowia lipolytica (yli) |
1 |
| |
Plants |
|
2 |
| |
|
Ostreococcus lucimarinus (olu) |
2 |
| |
Protists |
|
6 |
| |
|
Cryptosporidium parvum (cpv) |
1 |
| |
|
Leishmania major (lma) |
3 |
| |
|
Trypanosoma brucei (tbr) |
1 |
| |
|
Trypanosoma cruzi (tcr) |
1 |
| NULL |
|
|
242 |
| TOTAL |
|
|
4242 |
![[space]](http://homer.ornl.gov/compbio/public/images/bluespacer.gif){kind=small}
![[space]](http://maple.lsd.ornl.gov/common/images/bluespacer.gif){kind=small}