BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= pPI0512
(422 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28212143|ref|NP_783087.1| glutamate mutase, mutL [Clostr... 343 2e-92
gi|134300526|ref|YP_001114022.1| glutamate mutase, MutL [De... 341 5e-92
gi|121534597|ref|ZP_01666419.1| glutamate mutase, MutL [The... 340 8e-92
gi|580977|emb|CAA56922.1| methylaspartate mutase [Clostridi... 332 3e-89
gi|444421|prf||1907157C Glu mutase:SUBUNIT=large 329 3e-88
gi|730087|sp|Q05491|MUTL_CLOTT Protein mutL >gi|581010|emb|... 328 6e-88
gi|89895981|ref|YP_519468.1| hypothetical protein DSY3235 [... 324 5e-87
gi|109649228|ref|ZP_01373120.1| conserved hypothetical prot... 323 1e-86
gi|148323513|gb|EDK88763.1| hypothetical protein FNP_0967 [... 319 2e-85
gi|34763827|ref|ZP_00144737.1| METHYLASPARTATE MUTASE [Fuso... 316 2e-84
gi|19705159|ref|NP_602654.1| Methylaspartate mutase [Fusoba... 313 1e-83
gi|42526534|ref|NP_971632.1| conserved hypothetical protein... 313 2e-83
gi|78044948|ref|YP_359178.1| conserved hypothetical protein... 308 3e-82
gi|147678770|ref|YP_001212985.1| hypothetical protein PTH_2... 305 4e-81
gi|20807691|ref|NP_622862.1| methylaspartate mutase [Thermo... 247 1e-63
gi|150390136|ref|YP_001320185.1| methylaspartate mutase [Al... 246 2e-63
gi|106895449|ref|ZP_01362542.1| conserved hypothetical prot... 244 7e-63
gi|154250332|ref|YP_001411157.1| methylaspartate mutase [Fe... 230 2e-58
gi|89211546|ref|ZP_01189906.1| Conserved hypothetical prote... 227 1e-57
gi|145622976|ref|ZP_01778928.1| methylaspartate mutase [Pet... 225 5e-57
gi|154498302|ref|ZP_02036680.1| hypothetical protein BACCAP... 222 4e-56
gi|126698021|ref|YP_001086918.1| putative component of D-or... 222 4e-56
gi|145955875|ref|ZP_01804875.1| hypothetical protein CdifQ_... 221 8e-56
gi|150020219|ref|YP_001305573.1| hypothetical protein Tmel_... 213 2e-53
gi|86278273|gb|ABC88405.1| putative repair enzyme for 2-met... 209 4e-52
gi|157083856|gb|ABV13534.1| hypothetical protein CKO_02417 ... 204 1e-50
gi|123444215|ref|YP_001008183.1| glutamate mutase [Yersinia... 202 5e-50
gi|15800443|ref|NP_286455.1| hypothetical protein Z0894 [Es... 201 9e-50
gi|77975620|ref|ZP_00831155.1| hypothetical protein YfreA_0... 201 9e-50
gi|82776005|ref|YP_402352.1| putative glutamate mutase L [S... 198 6e-49
gi|77976543|ref|ZP_00832026.1| COG0516: IMP dehydrogenase/G... 197 2e-48
gi|50843718|ref|YP_056945.1| methylaspartate mutase [Propio... 174 1e-41
gi|84497868|ref|ZP_00996665.1| glutamate mutase, mutL [Jani... 152 5e-35
gi|119715221|ref|YP_922186.1| hypothetical protein Noca_097... 149 4e-34
gi|119882057|ref|ZP_01648341.1| conserved hypothetical prot... 145 5e-33
gi|76797606|ref|ZP_00779893.1| methylaspartate mutase [Ther... 142 3e-32
gi|91200842|emb|CAJ73896.1| hypothetical protein [Candidatu... 139 3e-31
gi|145594799|ref|YP_001159096.1| hypothetical protein Strop... 130 1e-28
gi|149177279|ref|ZP_01855884.1| Methylaspartate mutase [Pla... 120 1e-25
gi|114845385|ref|ZP_01455792.1| methylaspartate mutase [The... 90 3e-16
gi|82523796|emb|CAI78539.1| hypothetical protein [unculture... 81 1e-13
>gi|28212143|ref|NP_783087.1| glutamate mutase, mutL [Clostridium tetani E88]
gi|28204587|gb|AAO37024.1| glutamate mutase, mutL [Clostridium tetani E88]
Length = 467
Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats.
Identities = 181/424 (42%), Positives = 274/424 (64%), Gaps = 4/424 (0%)
Query: 1 MEGFNNGMQQLEAQI--GHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGA 58
M GFN ++L Q+ + + L CSSAAGGLKM+A+GLVP+LTA+AAK AA AGA
Sbjct: 46 MTGFNKAYEKLSKQLEGKEVNFVKKLACSSAAGGLKMIAIGLVPDLTAEAAKRAALGAGA 105
Query: 59 KVVKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAG 118
+++ YS+E+S E +EI + N D++LL GGTDGGNK+ I+ NAK L + D I+ AG
Sbjct: 106 RILNVYSYELSSRELEEIKNSNLDIILLAGGTDGGNKECIIHNAKMLAKYNIDLPIVVAG 165
Query: 119 NKTASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQ 178
NK A+ + EI +N V T+NVMP+ N++N+ PA+++I+++F+ RI+EAKG+S +
Sbjct: 166 NKAAADTVSEILTDANIFHTV-TDNVMPKLNILNVEPAREEIRQIFMKRIVEAKGMSNAE 224
Query: 179 EMSGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVI 238
+ ++PTP AVL + S+G +++G+GD++ VD+GGATTDI+S+A GEPT V
Sbjct: 225 DFINGILMPTPAAVLKAARVLSEGTDKEDGIGDLVVVDIGGATTDIHSIADGEPTKPGVT 284
Query: 239 TKGLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATL 298
+GL EP +KRTVEGDLGMRYS ++ + L + IE+ + +
Sbjct: 285 MRGLQEPLAKRTVEGDLGMRYSAVSLFEAAGTRKIQKYLCDKSVNIEERCQFRANNIRMV 344
Query: 299 PQTDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSI 358
P+ +E+ + ++ +A+ A +A+ERH GY E A+TPMG V+T GKDL +V ++G GG +
Sbjct: 345 PEKEEDIKFDEVMAKVATDIAMERHSGYVESAYTPMGVVYTQIGKDLLQVKSVIGTGGVL 404
Query: 359 KNNTDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKKE 418
++ +P IL +P++ KP+ P + +DK YI +SMGLL+ P A+ IMKK
Sbjct: 405 VHSENPGDILKAGTFDV-ENPVYLKPQDPGFYIDKTYILSSMGLLAEDYPEKAIRIMKKY 463
Query: 419 ITEI 422
+ +
Sbjct: 464 LVRV 467
>gi|134300526|ref|YP_001114022.1| glutamate mutase, MutL [Desulfotomaculum reducens MI-1]
gi|134053226|gb|ABO51197.1| glutamate mutase, MutL [Desulfotomaculum reducens MI-1]
Length = 462
Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats.
Identities = 180/423 (42%), Positives = 273/423 (64%), Gaps = 4/423 (0%)
Query: 1 MEGFNNGMQQLEAQIGHF--AYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGA 58
+EG N +++++ G + L CSSAAGGL+MVA+GLV ELT +AA+ AA AGA
Sbjct: 41 LEGLNKALEEIKPFFGGTLPQFQSRLACSSAAGGLRMVAIGLVKELTVEAARQAALGAGA 100
Query: 59 KVVKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAG 118
+++ Y+ +++ +E ++I PD++LL GGTDGGNK+ IL NA+ L +II AG
Sbjct: 101 RILGVYAHQLTSSEIEQIDGSCPDIILLAGGTDGGNKETILHNARMLAKTKYGNTIIIAG 160
Query: 119 NKTASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQ 178
NK+A+ E+ +I + K +T NV+P+ N +N+ PA+ I+ F+ +I+EAKGL R +
Sbjct: 161 NKSAADEVQDILLKAGKD-VRVTANVLPELNKLNVEPARDAIRATFLEKIVEAKGLRRAE 219
Query: 179 EMSGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVI 238
++PTP AVL +L S G + G+G+++ VD+GGATTDI+S+A+G PT + V
Sbjct: 220 TYIQGVLMPTPAAVLNAAKLLSTGTEDEAGLGELIVVDIGGATTDIHSVAEGHPTRSGVT 279
Query: 239 TKGLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATL 298
KGLPEP++KRTVEGDLGMR S ++ + + A G+ +S++E +++ L
Sbjct: 280 YKGLPEPFTKRTVEGDLGMRVSALSLLESIGSRRLASVTGLPESEVESYVQYVQNRVELL 339
Query: 299 PQTDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSI 358
P+ ++ I+ +AR A +A+ERH G E +TPMG ++ GKDL+EVPY++G GG I
Sbjct: 340 PENGKQWEIDTAMARLATDLAMERHAGTLENVWTPMGAMYIQHGKDLTEVPYLIGTGGVI 399
Query: 359 KNNTDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKKE 418
N+ P QIL GA K + P +PK PK++LDK+YI A++GLL+ +P AL + KK
Sbjct: 400 VNHPHPRQILEGALYKQDQ-PTVLRPKQPKFLLDKEYILAAVGLLAEVKPTAALRLAKKY 458
Query: 419 ITE 421
+ E
Sbjct: 459 MVE 461
>gi|121534597|ref|ZP_01666419.1| glutamate mutase, MutL [Thermosinus carboxydivorans Nor1]
gi|121306849|gb|EAX47769.1| glutamate mutase, MutL [Thermosinus carboxydivorans Nor1]
Length = 467
Score = 340 bits (873), Expect = 8e-92, Method: Composition-based stats.
Identities = 191/419 (45%), Positives = 266/419 (63%), Gaps = 2/419 (0%)
Query: 1 MEGFNNGMQQLEAQIGHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKV 60
MEG N + +L A+ G + ++L CSSAAGGLKMVA+GLVPELTA+AAK AA AGAKV
Sbjct: 41 MEGLNQALDKLFAKTGRLEFAKVLGCSSAAGGLKMVAIGLVPELTAEAAKRAALGAGAKV 100
Query: 61 VKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNK 120
+ Y E+S E +EI + P+++LL GGTDGGNK+VIL NAK L + ++ AGNK
Sbjct: 101 LGVYCHELSDYELEEIAGLKPEIILLAGGTDGGNKEVILHNAKMLAASGLNVPVVVAGNK 160
Query: 121 TASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEM 180
+ + + +I A+ TENVMP+ + +NI PA+ I+++F+ RI+EAKGL++ +
Sbjct: 161 SVAPAVVKIL-AATMTDVYHTENVMPRLHELNIEPARATIRDVFLKRIVEAKGLNKANKF 219
Query: 181 SGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITK 240
++PTP AVL EL S G + G+GD+M VD+GGATTD+YS+ KGEP+ V +
Sbjct: 220 VDRMVMPTPAAVLRAAELLSCGTDNEPGLGDLMVVDIGGATTDVYSIGKGEPSKPGVALR 279
Query: 241 GLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQ 300
GLPEP++KRTVEGDLGMRYS A+ + + + + ++ + A LPQ
Sbjct: 280 GLPEPFAKRTVEGDLGMRYSAGALLKAAGARLISSYAETSEEAVTAYVAKVEANIEYLPQ 339
Query: 301 TDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKN 360
T EE RIE + K++ +RH G E FTP G F TGKDL+ V +VG GG I N
Sbjct: 340 TAEEERIEIAMGCACTKLSADRHVGQLETYFTPFGSTFVQTGKDLTGVTTVVGTGGVIIN 399
Query: 361 NTDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKKEI 419
N PE IL G + + +P KP+ P++++D++YI A+MGLL P A+ +MKK I
Sbjct: 400 NPHPEAILQGIVFEEA-NPHILKPQQPEFLIDRQYIMAAMGLLGEDYPDTAVRMMKKYI 457
>gi|580977|emb|CAA56922.1| methylaspartate mutase [Clostridium cochlearium]
Length = 463
Score = 332 bits (850), Expect = 3e-89, Method: Composition-based stats.
Identities = 176/410 (42%), Positives = 266/410 (64%), Gaps = 4/410 (0%)
Query: 1 MEGFNNGMQQLEAQI--GHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGA 58
M GFN ++L Q+ + + L CSSAAGGLKM+A+GLVP+LTA+AAK AA AGA
Sbjct: 44 MTGFNKAYEKLSKQLEGKEVNFVKKLACSSAAGGLKMIAIGLVPDLTAEAAKRAAQGAGA 103
Query: 59 KVVKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAG 118
+++ YS+E+S E +EI N D++LL GGTDGGNK+ I+ NAK L + + I+ AG
Sbjct: 104 RILNVYSYELSLKEIEEIKSSNLDIILLAGGTDGGNKECIIHNAKMLAKHNINLPIVVAG 163
Query: 119 NKTASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQ 178
NK A+ + EI +N V T+NVMP+ N++N+ PA+++I+++F+ RI++AKG+S +
Sbjct: 164 NKAAADTVSEILTEANIFHKV-TDNVMPKLNILNVEPAREEIRQIFMKRIVQAKGMSNAE 222
Query: 179 EMSGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVI 238
++PTP AVL + S+G ++G+GD++ VD+GGATTDI+S+A GEPT V
Sbjct: 223 NFINGILMPTPAAVLKAARVLSQGTDTEDGIGDLIVVDIGGATTDIHSIADGEPTKPGVT 282
Query: 239 TKGLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATL 298
+GL EP +KRTVEGDLGMRYS ++ + L + I+ + +
Sbjct: 283 MRGLQEPLAKRTVEGDLGMRYSAVSLFEAAGTRKIQKYLCDKSVDIKQNCQFRSENIKMV 342
Query: 299 PQTDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSI 358
P+T+EE + ++ +A+ A +A+ERH GY E A+TPMG V+T GKDL +V ++G GG +
Sbjct: 343 PETEEEIKFDEVMAKVATDIAIERHSGYIESAYTPMGVVYTQIGKDLLQVKTVIGTGGVL 402
Query: 359 KNNTDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEP 408
++ +P +IL A + +P++ KP+ P + +DK YI +SMGLL+ P
Sbjct: 403 VHSKNPGEILK-AGTFDTENPVYLKPQDPDFYIDKTYILSSMGLLAEDHP 451
>gi|444421|prf||1907157C Glu mutase:SUBUNIT=large
Length = 462
Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats.
Identities = 176/424 (41%), Positives = 268/424 (63%), Gaps = 4/424 (0%)
Query: 1 MEGFNNGMQQLEAQI--GHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGA 58
M GFN ++L Q+ + + L CSSAAGGLKM+A+GLVPELTA+AAK AA AGA
Sbjct: 41 MVGFNKAYEKLTEQLEGKEVNFVKKLACSSAAGGLKMIAIGLVPELTAEAAKRAALGAGA 100
Query: 59 KVVKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAG 118
+V+ YS++++ E +EI + N D++LL GGTDGGNK+ ++ NAK L I+ AG
Sbjct: 101 RVLNVYSYDLTNKEVEEIKNSNLDIILLAGGTDGGNKECMIHNAKMLAEHGVKLPIVVAG 160
Query: 119 NKTASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQ 178
NK S E+ EIF + V TENVMP+ N +N+ PA+++I+++F+ +I+EAKG+S +
Sbjct: 161 NKVVSDEVSEIFDKAGIFYRV-TENVMPKLNTLNVEPAREEIRQIFMKKIVEAKGMSNAE 219
Query: 179 EMSGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVI 238
++PTP AVL + ++G +++G+GD++ VD+GGATTD++S+A GEP+ V
Sbjct: 220 SFINGILMPTPAAVLKAARVLAEGTDKEDGIGDLIVVDIGGATTDVHSLADGEPSKPGVT 279
Query: 239 TKGLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATL 298
+GL EP++KRTVEGDLGMRYS A+ + L +E K +
Sbjct: 280 LRGLEEPFAKRTVEGDLGMRYSAIALWEASGTRKLQKYLCDNTVDVEACCKYRAEHIKMV 339
Query: 299 PQTDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSI 358
P+T+EE + ++ +A+ A +A+ERH G E +TPMG +++ GKDL V ++G GG +
Sbjct: 340 PETEEEIKFDEAMAKVATDMAMERHVGVIESMYTPMGVIYSQIGKDLLNVKCVIGTGGVL 399
Query: 359 KNNTDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKKE 418
++ +P +IL + D KP+ P+Y +DK YI ++MGLL+ P A+ IMKK
Sbjct: 400 VHSKNPGEILKAGSFDMA-DATHLKPQHPEYYIDKTYILSAMGLLAEDLPDKAVRIMKKY 458
Query: 419 ITEI 422
+ ++
Sbjct: 459 LVKV 462
>gi|730087|sp|Q05491|MUTL_CLOTT Protein mutL
gi|581010|emb|CAA49909.1| glutamate mutase [Clostridium tetanomorphum]
Length = 462
Score = 328 bits (840), Expect = 6e-88, Method: Composition-based stats.
Identities = 175/424 (41%), Positives = 268/424 (63%), Gaps = 4/424 (0%)
Query: 1 MEGFNNGMQQLEAQI--GHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGA 58
M GFN ++L Q+ + + L CSSAAGGLKM+A+GLVPELTA+AAK AA AGA
Sbjct: 41 MVGFNKAYEKLTEQLEGKEVNFVKKLACSSAAGGLKMIAIGLVPELTAEAAKRAALGAGA 100
Query: 59 KVVKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAG 118
+V+ YS++++ E +EI + N D++LL GGTDGGNK+ ++ NAK L I+ AG
Sbjct: 101 RVLNVYSYDLTNKEVEEIKNSNLDIILLAGGTDGGNKECMIHNAKMLAEHGVKLPIVVAG 160
Query: 119 NKTASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQ 178
NK S E+ EIF + V TENVMP+ N +N+ PA+++I+++F+ +I+EAKG+S +
Sbjct: 161 NKVVSDEVSEIFDKAGIFYRV-TENVMPKLNTLNVEPAREEIRQIFMKKIVEAKGMSNAE 219
Query: 179 EMSGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVI 238
++PTP AVL + ++G +++G+GD++ VD+GGATTD++S+A GEP+ V
Sbjct: 220 SFINGILMPTPAAVLKAARVLAEGTDKEDGIGDLIVVDIGGATTDVHSLADGEPSKPGVT 279
Query: 239 TKGLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATL 298
+GL EP++KRTVEGDLGMRYS ++ + L +E K +
Sbjct: 280 LRGLEEPFAKRTVEGDLGMRYSAISLWEASGTRKLQKYLCDNTVDVEACCKYRAEHIKMV 339
Query: 299 PQTDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSI 358
P+T+EE + ++ +A+ A +A+ERH G E +TPMG +++ GKDL V ++G GG +
Sbjct: 340 PETEEEIKFDEAMAKVATDMAMERHVGVIESMYTPMGVIYSQIGKDLLNVKCVIGTGGVL 399
Query: 359 KNNTDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKKE 418
++ +P +IL + D KP+ P+Y +DK YI ++MGLL+ P A+ IMKK
Sbjct: 400 VHSKNPGEILKAGSFDMA-DATHLKPQHPEYYIDKTYILSAMGLLAEDLPDKAVRIMKKY 458
Query: 419 ITEI 422
+ ++
Sbjct: 459 LVKV 462
>gi|89895981|ref|YP_519468.1| hypothetical protein DSY3235 [Desulfitobacterium hafniense Y51]
gi|89335429|dbj|BAE85024.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 459
Score = 324 bits (831), Expect = 5e-87, Method: Composition-based stats.
Identities = 175/417 (41%), Positives = 270/417 (64%), Gaps = 3/417 (0%)
Query: 1 MEGFNNGMQQLEAQIGHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKV 60
MEG N+ + Q+ G + + R L CSSAAGGL+M+A GLV ELTA+AA+ AA AGA+V
Sbjct: 41 MEGLNHALAQIPEPPGGWNFARKLACSSAAGGLRMMASGLVKELTAEAARRAALGAGARV 100
Query: 61 VKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNK 120
++ +S+E++ + + I PD++LL GGTDGGNK+++L NA+RL + ++ AGNK
Sbjct: 101 LEVFSYELTSEDIERIAQAQPDILLLAGGTDGGNKEILLKNAERLLELPFSLPVVVAGNK 160
Query: 121 TASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEM 180
S + EI + + V+ NVMP+ NV+ + A+ I+ +F+++I+ AKGL + +
Sbjct: 161 VVSSQAAEIVRCKHDP-VVVAGNVMPELNVLEVESARDAIRGIFLNQIVRAKGLDKAETF 219
Query: 181 SGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITK 240
++PTP AVL+ EL S+GYG ++G+G+++ +D+GGATTDI+S+A GEP+ V+ K
Sbjct: 220 IERVMMPTPAAVLSAAELLSQGYGDEKGLGELLIIDVGGATTDIHSIAAGEPSKPGVMLK 279
Query: 241 GLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQ 300
GLPEPY+KRTVEGDLGMRYS A+ + LG +I++ + A P +PQ
Sbjct: 280 GLPEPYAKRTVEGDLGMRYSAEALVAASGKRLH-QVLGWRDEEIQEQLGFVQADPWRVPQ 338
Query: 301 TDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKN 360
+ EA + + R AV+++++RH G + + P G + GKDL+++P +VG GG + +
Sbjct: 339 NEREASFDTAMGRMAVELSMKRHVGTLQVVYAPFGVSYVQQGKDLTQLPVVVGTGGVLLH 398
Query: 361 NTDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKK 417
+ +P +L GA A+ +P F KP+ P + LD+ YI ASMGLL P +AL ++KK
Sbjct: 399 HGEPLAVLRGALFNAA-EPTFLKPQNPDFYLDQDYILASMGLLREVNPLVALRLLKK 454
>gi|109649228|ref|ZP_01373120.1| conserved hypothetical protein [Desulfitobacterium hafniense DCB-2]
gi|109639626|gb|EAT49183.1| conserved hypothetical protein [Desulfitobacterium hafniense DCB-2]
Length = 460
Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats.
Identities = 174/417 (41%), Positives = 270/417 (64%), Gaps = 3/417 (0%)
Query: 1 MEGFNNGMQQLEAQIGHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKV 60
MEG N+ + Q+ G + + R L CSSAAGGL+M+A GLV ELTA+AA+ AA AGA+V
Sbjct: 42 MEGLNHALAQIPQPPGGWNFARKLACSSAAGGLRMMASGLVKELTAEAARRAALGAGARV 101
Query: 61 VKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNK 120
++ +S+E++ + + I PD++LL GGTDGGNK+++L NA++L + ++ AGNK
Sbjct: 102 LEVFSYELTSEDIERIAQAQPDILLLAGGTDGGNKEILLKNAEKLLELPFSLPVVVAGNK 161
Query: 121 TASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEM 180
S + EI + + V+ NVMP+ NV+ + A+ I+ +F+++I+ AKGL + +
Sbjct: 162 VVSSQAAEIVRCKHDP-VVVAGNVMPELNVLEVESARDAIRGIFLNQIVRAKGLDKAETF 220
Query: 181 SGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITK 240
++PTP AVL+ EL S+GYG ++G+G+++ +D+GGATTDI+S+A GEP+ V+ K
Sbjct: 221 IERVMMPTPAAVLSAAELLSQGYGDEKGLGELLIIDVGGATTDIHSIAAGEPSKPGVMLK 280
Query: 241 GLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQ 300
GLPEPY+KRTVEGDLGMRYS A+ + LG +I++ + A P +PQ
Sbjct: 281 GLPEPYAKRTVEGDLGMRYSAEALVAASGKRLH-QVLGWRDEEIQEQLGFVQADPWRVPQ 339
Query: 301 TDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKN 360
+ EA + + R AV+++++RH G + + P G + GKDL+++P +VG GG + +
Sbjct: 340 NEREASFDTAMGRMAVELSMKRHVGTLQVVYAPFGVSYVQQGKDLTQLPVVVGTGGVLLH 399
Query: 361 NTDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKK 417
+ +P +L GA A+ +P F KP+ P + LD+ YI ASMGLL P +AL ++KK
Sbjct: 400 HGEPLAVLRGALFNAA-EPTFLKPQNPDFYLDQDYILASMGLLREVNPLVALRLLKK 455
>gi|148323513|gb|EDK88763.1| hypothetical protein FNP_0967 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 462
Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats.
Identities = 179/426 (42%), Positives = 274/426 (64%), Gaps = 14/426 (3%)
Query: 3 GFNNGMQQLEAQIGH----FAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGA 58
GFN + LE ++ + + + + CSSAAGGLK++A+GLVPELT +AAK AA S+GA
Sbjct: 45 GFNEAFEVLENELKNKLESYKIVKKVACSSAAGGLKIIAIGLVPELTTEAAKKAALSSGA 104
Query: 59 KVVKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAG 118
+V+KTY+F ++ + QEI ++ D++LL GGT+GGN++ IL NAK L + + I+ AG
Sbjct: 105 RVIKTYAFNLTDKDIQEISNLPHDMLLLTGGTNGGNREYILNNAKILAKNNIEKPIVIAG 164
Query: 119 NKTASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQ 178
N S ++ EIFK +N + I+ENVMP N IN+ P K+ I+E+F+ II+AKG+ +Q
Sbjct: 165 NVEVSEQIAEIFKKNN-IEFYISENVMPVVNKINVIPVKEVIREVFMKNIIKAKGMENVQ 223
Query: 179 EMSGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVI 238
++ G I+PTP AV+ E+FSK D+ + + +D+GGATTD++S+ KG P ++
Sbjct: 224 KLVGDIIMPTPTAVMKAAEIFSK----DD--NNSVVIDIGGATTDVHSIGKGLPKTNDIQ 277
Query: 239 TKGLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSK--IEDWIKRCVAAPA 296
KG+ EPYSKRTVEGDLGMRYS A+ + ++ + LG + SK I + K P
Sbjct: 278 LKGMEEPYSKRTVEGDLGMRYSSLALYEATSLNKIREYLGSKDSKINIRENFKFRHENPD 337
Query: 297 TLPQTDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGG 356
+ +T+++ ++ +A ++A+ RH G E F+PMG +F GKDL++V Y++G GG
Sbjct: 338 FVAETEDDIIFDEMMAMLCTEIAMNRHVGTLESIFSPMGTLFVQNGKDLTDVKYVIGTGG 397
Query: 357 SIKNNTDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMK 416
I N+ +P +IL +P+ KPK PK+++DK YI ++MGLL+ +A IMK
Sbjct: 398 IINNSRNPRKILYLTLFNED-NPLLLKPKYPKFLVDKTYIMSAMGLLANDYSDIAYQIMK 456
Query: 417 KEITEI 422
+ + EI
Sbjct: 457 EYLVEI 462
>gi|34763827|ref|ZP_00144737.1| METHYLASPARTATE MUTASE [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27886403|gb|EAA23668.1| METHYLASPARTATE MUTASE [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 462
Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats.
Identities = 173/401 (43%), Positives = 261/401 (65%), Gaps = 10/401 (2%)
Query: 24 LCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSFEISQAEQQEIYDINPDL 83
+ CSSAAGGLK++A+GLVPELT +AAK AA S+GA+V+KTY+F++++ + +EI + D+
Sbjct: 70 VACSSAAGGLKIIAIGLVPELTTEAAKKAALSSGARVIKTYAFDLTENDIKEISKLPYDM 129
Query: 84 VLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIFKASNKKKCVITEN 143
+LL GGT+GGN++ IL NA L + I+ AGN+ AS ++ EIFK N + I+EN
Sbjct: 130 LLLTGGTNGGNREYILNNANILAKNNIKKPIVVAGNEEASEQIAEIFKEHN-IEFYISEN 188
Query: 144 VMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLTGCELFSKGY 203
VMP N IN+ P K+ I+E+F+ I++AKG+ +Q++ G I+PTP AV+ E+FSK
Sbjct: 189 VMPVVNKINVIPVKEVIREVFMRNIVKAKGMENVQKIVGDIIMPTPTAVMKAAEIFSKDN 248
Query: 204 GRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGDLGMRYSLTA 263
+ + +D+GGATTD++S+ KG P ++ KG+ EPYSKRTVEGDLGMRYS A
Sbjct: 249 ------NNSIVIDIGGATTDVHSIGKGLPKTNDIQLKGVEEPYSKRTVEGDLGMRYSSLA 302
Query: 264 MADEMNMEVFADELGIEQSK--IEDWIKRCVAAPATLPQTDEEARIEQGLARNAVKVAVE 321
+ + ++ + LG SK I + K P + +T+++ ++ +A ++A+
Sbjct: 303 LYEAASLNKIREYLGSMDSKINIRENFKFRHENPDFVAETEDDIIFDEMMAMLCTEIAMN 362
Query: 322 RHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKNNTDPEQILSGAEKKASRDPMF 381
RH G E F+PMG +F GKDL++V Y++G GG I N+ +P +IL +P+
Sbjct: 363 RHVGTLESIFSPMGTLFVQNGKDLTDVKYVIGTGGIINNSRNPRKILDLTLFNED-NPLL 421
Query: 382 AKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKKEITEI 422
KPK PK+++DK YI ++MGLL+ P +A IMKK + EI
Sbjct: 422 LKPKYPKFLVDKTYIMSAMGLLANDYPDVAYEIMKKYLVEI 462
>gi|19705159|ref|NP_602654.1| Methylaspartate mutase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19713096|gb|AAL93953.1| Methylaspartate mutase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 462
Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats.
Identities = 175/426 (41%), Positives = 271/426 (63%), Gaps = 14/426 (3%)
Query: 3 GFNNGMQQLEA----QIGHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGA 58
GFN + LE ++ + + + CSSAAGGLK++A+GLVPELT +AAK AA S+GA
Sbjct: 45 GFNEAFEILENDLKNKLKSYEIVKKVACSSAAGGLKIIAIGLVPELTTEAAKKAALSSGA 104
Query: 59 KVVKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAG 118
+V+KTY+F ++ + +EI ++ D++LL GGT+GGN++ IL NAK L + + I+ AG
Sbjct: 105 RVIKTYAFNLTDKDIEEISELPHDMLLLTGGTNGGNREYILNNAKILAKNNIEKPIVVAG 164
Query: 119 NKTASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQ 178
N+ S ++ +IFK N + TENVMP N IN+ P K+ I+E+F+ I++AKG+ +Q
Sbjct: 165 NEEVSEQIAKIFKEHN-IEFYTTENVMPVVNKINVIPVKEVIREVFMRNIVKAKGMENVQ 223
Query: 179 EMSGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVI 238
++ G I+PTP AV+ E+FSK D+ + + +D+GGATTD++S+ KG P ++
Sbjct: 224 KIIGDIIMPTPTAVMKAAEIFSK----DD--NNSIVIDIGGATTDVHSIGKGLPKTNDIQ 277
Query: 239 TKGLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSK--IEDWIKRCVAAPA 296
KG+ EPYSKRTVEGDLGMRYS A+ + ++ + LG + SK I + K
Sbjct: 278 LKGMEEPYSKRTVEGDLGMRYSSLALYEAASLNKIREYLGSKDSKINIRENFKFRQENTD 337
Query: 297 TLPQTDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGG 356
+ +T+++ ++ +A ++A+ RH G E F+PMG +F GKDL++V Y++G GG
Sbjct: 338 FVAETEDDIVFDEMMAMLCTEIAMNRHVGTLESIFSPMGTLFVQNGKDLTDVKYVIGTGG 397
Query: 357 SIKNNTDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMK 416
+ N+ +P +IL +P+ KPK PK+++DK YI ++MGLL+ P +A IMK
Sbjct: 398 ILNNSRNPRKILDLTLFNED-NPLLLKPKYPKFLVDKTYIMSAMGLLANDYPDIAYQIMK 456
Query: 417 KEITEI 422
+ EI
Sbjct: 457 TYLVEI 462
>gi|42526534|ref|NP_971632.1| conserved hypothetical protein TIGR01319 [Treponema denticola ATCC
35405]
gi|41816727|gb|AAS11513.1| conserved hypothetical protein TIGR01319 [Treponema denticola ATCC
35405]
Length = 459
Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats.
Identities = 170/421 (40%), Positives = 264/421 (62%), Gaps = 5/421 (1%)
Query: 1 MEGFNNGMQQLEAQIG-HFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAK 59
M G+NN ++ L + G + + L CSSAAGGLK++A+GLVPELT++AAK AA AGAK
Sbjct: 41 MIGYNNALELLHKKTGTDYTVVKSLACSSAAGGLKIIAIGLVPELTSEAAKRAALGAGAK 100
Query: 60 VVKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGN 119
V+ TYS ++++E + I + N D++LL GGT+GG+ I+ NAK L ++ AGN
Sbjct: 101 VIHTYSHNLNKSEAEAIVNSNADIILLAGGTNGGDSRCIIHNAKMLADYGVRVPVVVAGN 160
Query: 120 KTASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQE 179
K+A E+ EIFK ++ + ENVMP+ N +N+ A++ I+ +F++ I+ AKG++ ++
Sbjct: 161 KSAEDEIIEIFK--DRVDFHLAENVMPKINKLNVESARETIRSIFMNNIVHAKGMTHVES 218
Query: 180 MSGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVIT 239
++PTP AVL + S+G + G+GD++ +D+GGATTD++S A+G+PT V
Sbjct: 219 NIDNILMPTPAAVLKAAQTLSEGTENEAGLGDLIVLDIGGATTDVHSAAEGDPTQGSVFL 278
Query: 240 KGLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIE-QSKIEDWIKRCVAAPATL 298
GLPE + KRTVEGDLGMRYSL +AD L E + IE+ +K+ +
Sbjct: 279 YGLPEAFLKRTVEGDLGMRYSLPTVADVQGPHGLRHYLSKEYKYNIEEEVKKRNEHTDFI 338
Query: 299 PQTDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSI 358
+ ++ + +A+ V++ RH G P +T G F GKDL+++ YI+G GG +
Sbjct: 339 SENAKDLAFDCAVAKVCADVSMGRHVGVLTPVYTGCGASFQQEGKDLTQLRYIIGTGGIL 398
Query: 359 KNNTDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKKE 418
N + ++I+ A K DP KPK P+++LDK+YI ++MGLL+T +P +A+ IMKK
Sbjct: 399 VYNPNYKEIME-ACKFREDDPFSLKPKNPQFLLDKEYILSAMGLLATEDPDMAIRIMKKH 457
Query: 419 I 419
+
Sbjct: 458 L 458
>gi|78044948|ref|YP_359178.1| conserved hypothetical protein TIGR01319 [Carboxydothermus
hydrogenoformans Z-2901]
gi|77997063|gb|ABB15962.1| conserved hypothetical protein TIGR01319 [Carboxydothermus
hydrogenoformans Z-2901]
Length = 450
Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats.
Identities = 171/413 (41%), Positives = 261/413 (63%), Gaps = 11/413 (2%)
Query: 3 GFNNGMQQLEAQIGHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVK 62
G N+ + +L Q YD L SSAAGGL+MVA+GLV +LT +AAK AA +AGA+V K
Sbjct: 43 GINDCLLELSRQGIKEKYDIKLASSSAAGGLRMVAVGLVRDLTTEAAKKAALTAGARVEK 102
Query: 63 TYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTA 122
+YS+E++ + EI + PD++LL GGTDGGNK +L NA++L + +I+ AGN++A
Sbjct: 103 SYSYELTPEDLDEILALKPDIILLAGGTDGGNKKYLLENARKLSRLKLKGTILVAGNRSA 162
Query: 123 SYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEMSG 182
+ E+ I + K I NV+P N +NI P + I+++F+ +I+EAKGL + +++
Sbjct: 163 ASEVAGILEG--KVDFRIAPNVLPDLNTLNIEPVQNLIRQIFLEKIVEAKGLKKAEKIVD 220
Query: 183 YDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGL 242
++PTPLAVL G EL + + +G+++ +D+GGATTD++S+AKG PT+A V KGL
Sbjct: 221 KVMMPTPLAVLKGAELLA------QKIGELILIDVGGATTDVHSVAKGLPTLAGVSLKGL 274
Query: 243 PEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQTD 302
PEPY+KRTVEGDLG+R ++ + + E + GI ++ D++++ P LPQT
Sbjct: 275 PEPYAKRTVEGDLGLRRTVKNVVEYGREEFYNS--GITSGQLSDYLEKITKDPTYLPQTP 332
Query: 303 EEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKNNT 362
+E IE+ L R VK A+ RH G E +TP G+ F GKDL+ V +VG GG +
Sbjct: 333 QEKEIEKALTRICVKTAMNRHAGRLEEIWTPAGKSFVQYGKDLTRVEALVGTGGPLVYAE 392
Query: 363 DPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIM 415
+PE++L+ A + + +P KPK P+ LD +YI + GLL+ + L ++
Sbjct: 393 EPEKVLAAAFFEET-NPNILKPKNPEMYLDTEYILFAAGLLAENDRETGLKLL 444
>gi|147678770|ref|YP_001212985.1| hypothetical protein PTH_2435 [Pelotomaculum thermopropionicum SI]
gi|146274867|dbj|BAF60616.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
Length = 461
Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats.
Identities = 182/423 (43%), Positives = 265/423 (62%), Gaps = 8/423 (1%)
Query: 3 GFNNGMQQL--EAQIGHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKV 60
G +++L E G + L CSSAAGGL++V +GLVPE T +AA+MAA AGAK+
Sbjct: 44 GLEEALKRLAEEVDFGEKEKKQALACSSAAGGLRVVCVGLVPEYTTEAARMAALGAGAKI 103
Query: 61 VKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDF-SIIAAGN 119
V TYS+E+S++E EI + PD+VLL GGTDGGNK VI+ NAK L I +II AGN
Sbjct: 104 VGTYSYELSKSEVAEIEETAPDIVLLTGGTDGGNKKVIIHNAKMLSEIKGGVKNIIVAGN 163
Query: 120 KTASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQE 179
K+A ++ EI ++ K V T+NVM + V+N++ A + I+ELFI+RI EAKG++R++
Sbjct: 164 KSAYDDIKEILIKTS-KNIVYTKNVMSEIGVLNVDSANRAIRELFINRITEAKGIARVRS 222
Query: 180 MSGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVIT 239
M I+PTP AV+ +L ++G G+G+++ VD+GGATTD+YS+AKG P+ EV
Sbjct: 223 MINNVIMPTPSAVMEAAKLIAEGVAGCAGLGELLLVDVGGATTDVYSVAKGAPSRKEVSM 282
Query: 240 KGLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLP 299
GLP+PY KRTVEGDLG+ ++L ++ + + E EL + E+ + R P
Sbjct: 283 IGLPQPYVKRTVEGDLGLFHNLDSLIEIASTE--GAELIESLEEFEESV-RLFHQIGKFP 339
Query: 300 QTDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIK 359
+ D++ R L+ AVK AVERH G + T G GKDL+++ ++G GG +
Sbjct: 340 EGDKQIRSHLILSHLAVKTAVERHVGKIDIITTHNGDFMVQRGKDLTQLKLVIGTGGPVA 399
Query: 360 NNTDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKKEI 419
+ DP +L GA + + P KP P+ MLD+KYI ++GLL+ EP AL I+KK +
Sbjct: 400 FSPDPRYVLKGALFQKN-SPNMLKPINPEMMLDEKYILFAIGLLAQSEPLKALKIIKKYL 458
Query: 420 TEI 422
++
Sbjct: 459 AKL 461
>gi|20807691|ref|NP_622862.1| methylaspartate mutase [Thermoanaerobacter tengcongensis MB4]
gi|20516240|gb|AAM24466.1| methylaspartate mutase [Thermoanaerobacter tengcongensis MB4]
Length = 447
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 148/418 (35%), Positives = 239/418 (57%), Gaps = 21/418 (5%)
Query: 3 GFNNGMQQLEAQIGHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVK 62
G ++ L+ +IG F Y +L CSSAAGGLKM GLV ++T +AAK AA AGA +
Sbjct: 48 GLKAAIEDLKGKIGDFEYKEMLACSSAAGGLKMTVHGLVYDMTVRAAKEAALGAGANIKL 107
Query: 63 TYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTA 122
+ ++ + + ++I +I P+++LL GG D G+++ L N ++L + + +I AGN
Sbjct: 108 ITAGKLRRTDLEKIKEIKPNIILLAGGVDYGDRETALYNGEKLAELKLNVPVIYAGNIEN 167
Query: 123 SYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEMSG 182
E+ IFK + ++ I +NV P + +N+ P ++ I+++F II A G+SR++E+
Sbjct: 168 REEIAYIFKEAG-QEVYIVDNVYPSIDKLNVEPTRKMIQQVFEKHIITAPGMSRVKELVT 226
Query: 183 YDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGL 242
+IIPTP AV+ C L +GD+MA+D+GGATTD++S+ +G I ++
Sbjct: 227 GNIIPTPGAVMEACILLYN------EIGDLMALDIGGATTDVHSVTEGSEEIQKMTVN-- 278
Query: 243 PEPYSKRTVEGDLGMRYSLTAMADEMNM-EVFADELGIEQSKIEDWIKRCVAAPATLPQT 301
PEP +KRTVEGDLG+ + N+ E++ +E+ + + E+ IK +P T
Sbjct: 279 PEPLAKRTVEGDLGV------FVNSRNLFELWGEEVYKKFANAEELIKNI----KPVPTT 328
Query: 302 DEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKNN 361
DEE LA AV++AV+RH G F P G+ F + G+DL+ V +I+G GG
Sbjct: 329 DEEREFVLFLAAKAVEIAVKRHAGKMVSYFGPTGKSFYVEGRDLTAVKWIIGTGGVFTRL 388
Query: 362 TDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKKEI 419
E++L KA ++ P + K ++D+ YI A+ G+LS P AL ++K +
Sbjct: 389 EGSEELLKNINDKAPGKELYP-PSSAKVLIDRDYIMAACGVLSKKYPEEALRLLKNSL 445
>gi|150390136|ref|YP_001320185.1| methylaspartate mutase [Alkaliphilus metalliredigens QYMF]
gi|149949998|gb|ABR48526.1| methylaspartate mutase [Alkaliphilus metalliredigens QYMF]
Length = 454
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 143/419 (34%), Positives = 236/419 (56%), Gaps = 19/419 (4%)
Query: 3 GFNNGMQQLEAQIG--HFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKV 60
G + L +G YD +L SSAAGGLKM GLV ++T +AA+ AA AGA +
Sbjct: 48 GLQGALDDLSRNLGVDEIQYDEMLATSSAAGGLKMTVHGLVYDMTVRAAREAALGAGAII 107
Query: 61 VKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNK 120
+ ++ + + I + +P+++L+ GG D G +D + NA+++ ++ D +I AGN
Sbjct: 108 HQVTGGKLRRTDINRITEKSPNIILIAGGVDYGERDTAIENAEKIAQMNLDIPVIYAGNI 167
Query: 121 TASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEM 180
E+ EIFK K K I +NV P+ + +N+ P + I+++F II A G+ +++EM
Sbjct: 168 ENQEEMREIFK-DTKNKLYIVDNVYPRIDQLNVEPTRAVIQDVFEEHIIHAPGMKKVREM 226
Query: 181 SGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITK 240
IIPTP AV+ +L + +GD++ D+GGATTD++S+ +G I ++
Sbjct: 227 VNGPIIPTPGAVMEASKLLQ------QHIGDLITFDVGGATTDLHSVTEGSEEINRILLS 280
Query: 241 GLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQ 300
PEP +KRTVEGDLG+ ++ + + +E +ELG++ I + V +P+
Sbjct: 281 --PEPMAKRTVEGDLGVYINMKNIVSNIGVENLKEELGLD-------IDKLVETHQPIPK 331
Query: 301 TDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKN 360
T EE + + L AV VA+ERH G + P G+ GKDLS V +I+G GG++
Sbjct: 332 TSEEIKFVERLTLEAVLVALERHVGKLRHLYGPGGKTTVAEGKDLSNVKFIIGTGGALTR 391
Query: 361 NTDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKKEI 419
+ +L+ A K+ ++ + +A K ++D+ YI AS+G+LS P AL++MK+ +
Sbjct: 392 LPNRVHLLNQATTKSHQNSLMPTKEA-KILIDEAYIMASLGVLSKRYPEAALSLMKQSL 449
>gi|106895449|ref|ZP_01362542.1| conserved hypothetical protein [Clostridium sp. OhILAs]
gi|106773251|gb|EAT29842.1| conserved hypothetical protein [Clostridium sp. OhILAs]
Length = 452
Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats.
Identities = 146/405 (36%), Positives = 233/405 (57%), Gaps = 17/405 (4%)
Query: 15 IGHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSFEISQAEQQ 74
+ + YD +L SSAAGGLKM GLV ++T +AAK AA AGA + ++ + + +
Sbjct: 62 VDNIEYDDMLATSSAAGGLKMTVHGLVYDMTVRAAKEAALGAGANIHLVTGGKLKRTDLK 121
Query: 75 EIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIFKASN 134
++ DINP+++L+ GG D G +D + NA+ + +D D +I AGN E+ EIF+
Sbjct: 122 KVKDINPNIILIAGGVDYGERDTAIYNAELIADLDLDVPVIYAGNIENQDEIREIFEG-R 180
Query: 135 KKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLT 194
K K I +NV P+ + +NI P ++ I+++F II A G+ +++EM IIPTP +V+
Sbjct: 181 KNKLYIVDNVYPKIDQLNIEPTRKAIQDVFEEHIIHAPGMQKVREMVKGPIIPTPGSVME 240
Query: 195 GCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGD 254
LF + GD + D+GGATTD++S+ +G I ++ PEP +KRTVEGD
Sbjct: 241 ASILFRDNF------GDSITFDVGGATTDLHSVTEGSEEINRILVS--PEPMAKRTVEGD 292
Query: 255 LGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQTDEEARIEQGLARN 314
LG+ ++ + + +E + ELG + IE+ +K +P+T+EE + + L
Sbjct: 293 LGVYVNMENIVGIIGIEKLSAELGFD---IENLLKN----KKPIPRTEEEIQFVERLTLE 345
Query: 315 AVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKNNTDPEQILSGAEKK 374
AV VA+ERH G + P G++ GKDLS + YI+G GG++ D +I+ A +K
Sbjct: 346 AVIVALERHAGRLRNLYGPGGKITIAEGKDLSNIQYIIGTGGALTRLPDGVEIIREAVRK 405
Query: 375 ASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKKEI 419
S + K + + ++D YI AS+G+LS P AL +MK+ +
Sbjct: 406 HSGQLLLPKEEV-EVVIDHHYIMASLGVLSKKYPEAALNLMKQSM 449
>gi|154250332|ref|YP_001411157.1| methylaspartate mutase [Fervidobacterium nodosum Rt17-B1]
gi|154154268|gb|ABS61500.1| methylaspartate mutase [Fervidobacterium nodosum Rt17-B1]
Length = 468
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 144/408 (35%), Positives = 226/408 (55%), Gaps = 25/408 (6%)
Query: 3 GFNNGMQQLEAQIG-HFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVV 61
G ++++E +IG ++++ SSAAGGLKM GLV ++T +AA+ AA AGA +
Sbjct: 63 GIETALKKMEEKIGSKISWEKFAATSSAAGGLKMTVHGLVYDMTVRAAREAALGAGAVIK 122
Query: 62 KTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKT 121
+ ++ ++I I P L+LL GG D G + ++ NAK L +D D II AGN
Sbjct: 123 YVTAGKMDDFHLKKILSIQPKLILLAGGVDYGESETVVHNAKMLAKLDLDVPIIYAGNVA 182
Query: 122 ASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEMS 181
A+ ++ I +S KK ITENV P+ + +N+ P + IKE+F II+A G+ +I++M
Sbjct: 183 AAEHVEYIL-SSAGKKVYITENVYPRIDYLNVEPTRNVIKEVFAEHIIKAPGMEKIKDMV 241
Query: 182 GYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKG 241
Y+IIPTP AV+ EL Y E GD + +D+GGATTD+ S+ +G P I E++
Sbjct: 242 NYEIIPTPAAVMKTTEL---AY---EHFGDCLTIDIGGATTDVDSVTEGSPEIQEMMIS- 294
Query: 242 LPEPYSKRTVEGDLGM---RYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATL 298
PEP++KRTVEGDLG+ +++ M E N+ + + ED+ ++ +
Sbjct: 295 -PEPFAKRTVEGDLGLYVNAHNVIEMMGEENL----------RKQFEDY-DELLSRISPY 342
Query: 299 PQTDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSI 358
PQ D + LA V+ + RH G + +TP G+ GKDL+ V Y+ G GG +
Sbjct: 343 PQGDRDEYFISKLATFCVQQGIRRHAGSKKHLYTPTGRKTIAEGKDLTAVKYVFGTGGFL 402
Query: 359 KNNTDPEQILSGAEKKASRDPMFAKPKAP-KYMLDKKYIFASMGLLST 405
+ ++ L + PM P K D++YIFA++GL+++
Sbjct: 403 SRSKYAKEALESIRHLSRLHPMELLPSENIKLFRDERYIFAAIGLIAS 450
>gi|89211546|ref|ZP_01189906.1| Conserved hypothetical protein 1319 [Halothermothrix orenii H 168]
gi|89158852|gb|EAR78540.1| Conserved hypothetical protein 1319 [Halothermothrix orenii H 168]
Length = 447
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 143/420 (34%), Positives = 239/420 (56%), Gaps = 29/420 (6%)
Query: 3 GFNNGMQQLEAQIG--HFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKV 60
G NN ++ L+ +G + + SSAAGGLKM GLV ++T KAA+ AA AGA +
Sbjct: 48 GLNNAIENLKEVLGADDLTWSEFMATSSAAGGLKMTVHGLVKDMTVKAAREAALGAGAVI 107
Query: 61 VKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNK 120
+ ++ +++ +I +INP+++LL GG D G ++VIL NA+ L + + II AGNK
Sbjct: 108 KMVTAGKLRESKLNKIKEINPNIILLAGGVDYGEEEVILHNARLLAQMKLNVPIIYAGNK 167
Query: 121 TASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEM 180
E+ +IF S ++ +IT+NV P+ + +NI P ++ I+++F II+A G+ +I+ M
Sbjct: 168 AIQDEVRDIFDNS-QQDILITDNVYPEIDTLNIEPTRRLIQQVFARHIIKAPGMEKIKPM 226
Query: 181 SGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITK 240
+++PTP AV+ L E +G+++ +D+GGATTD++S+ + P + +V+
Sbjct: 227 LSSEMMPTPGAVMKSARLLR------EDIGNLVVIDIGGATTDVHSVTEDTPGVKQVLIN 280
Query: 241 GLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQ 300
PEP +KRTVEGDLG+ + VF IE+++ + + V A +P
Sbjct: 281 --PEPVAKRTVEGDLGVFINAP--------HVFK---LIEETRKNGYEYKEVKA---IPG 324
Query: 301 TDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKN 360
++E + LA A A++RH G F P G+ GKDLS V +++G GG++
Sbjct: 325 NEKERGFVRLLAETAALTAIKRHAGRLRDFFGPQGRQTVAEGKDLSGVRWVIGTGGALTR 384
Query: 361 NTDPEQILSGA-EKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKKEI 419
+++L+ E + SR P+ K ++D+ YI A+MG+LS P AL ++K+ +
Sbjct: 385 LGRGDEVLTRVIEYRGSR---LFPPEDAKILIDRNYIMAAMGILSEKYPDKALRLLKESL 441
>gi|145622976|ref|ZP_01778928.1| methylaspartate mutase [Petrotoga mobilis SJ95]
gi|144946646|gb|EDJ81686.1| methylaspartate mutase [Petrotoga mobilis SJ95]
Length = 450
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 143/420 (34%), Positives = 236/420 (56%), Gaps = 22/420 (5%)
Query: 3 GFNNGMQQLEAQI-GHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVV 61
G ++ +E ++ ++++ L SSAAGGL M GLV ++T +AAK AA AGA +
Sbjct: 47 GIEKALKNMEEKVKDKISWEKFLATSSAAGGLSMTVHGLVYDMTVRAAKEAALGAGAILK 106
Query: 62 KTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKT 121
S ++ ++ + I I P L+LL GG D G ++ +L NA+ L + D II AGN
Sbjct: 107 YITSGKLRESHLKHILKIKPKLILLSGGVDYGEEETVLYNAELLSNLPLDIPIIYAGNTA 166
Query: 122 ASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEMS 181
E++EIFK N K +ITENV P+ + +N+ PA++ I+E+F II A G+ +I ++
Sbjct: 167 VKEEIEEIFKEKN-KNIIITENVYPKIDHLNVEPARKIIQEVFSKHIIHAPGMEKIYDVV 225
Query: 182 GYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKG 241
++IPTP AV+ EL ++ Y GD++ VD+GGATTDI S+ G P I +++
Sbjct: 226 DEEVIPTPGAVMNTTELLNELY------GDVLTVDIGGATTDIDSVTDGSPEIQKILVS- 278
Query: 242 LPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSK--IEDWIKRCVAAPATLP 299
P+P SKRTV+GD+G+ +N + +G EQ K E++ + + + P
Sbjct: 279 -PQPRSKRTVDGDMGIY---------VNAHNVVEMIGKEQIKKDFENY-EEILKNISPYP 327
Query: 300 QTDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIK 359
Q DE+ + LA+ +++RH G + FTP G+ GKDL+ V I G GG +
Sbjct: 328 QNDEQEKFATYLAKFCFLTSLKRHAGRIDYIFTPTGRKKVAQGKDLTAVKIIFGTGGILS 387
Query: 360 NNTDPEQILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKKEI 419
+ ++I ++ + + + PK + DK YIFA++G+++ + +A+ I++ +I
Sbjct: 388 RSKYKKEIFESLKQLKNSEDLLLPPKDVTFAYDKNYIFANVGVIANLDKEIAIKILQDDI 447
>gi|154498302|ref|ZP_02036680.1| hypothetical protein BACCAP_02291 [Bacteroides capillosus ATCC
29799]
gi|150272849|gb|EDN00018.1| hypothetical protein BACCAP_02291 [Bacteroides capillosus ATCC
29799]
Length = 475
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 155/444 (34%), Positives = 247/444 (55%), Gaps = 35/444 (7%)
Query: 1 MEGFNNGMQQLEAQIGHFAY--DRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGA 58
MEG + + AQ F R CS AAGGL+MVALG +P +TAKAAK A +AGA
Sbjct: 43 MEGAGKAQEAIRAQGVEFDELCKRYSSCS-AAGGLRMVALGYMPRVTAKAAKEVAMTAGA 101
Query: 59 KVVKTYSFEISQAEQQEI-YDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAA 117
+V++ S E ++E+ +INPD++LL GGTDGG++ + NA+ +C++ ++I A
Sbjct: 102 RVMQVVSSEEPLDYRKEVLMEINPDIILLSGGTDGGDETCAMENAEMICSLHSKATVIVA 161
Query: 118 GNKTASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRI 177
NK A + E+F N + V N+MP + +N+ PA++ I E FI +I AKGL
Sbjct: 162 CNKYAQMPVAEMFD-RNGIRYVRVPNIMPTIHDLNVKPAREAIHEEFIKQITRAKGLLEF 220
Query: 178 QE-MSGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAE 236
++ ++ ++PTP AVL EL ++G EGVG ++ +DLGGATTDI+S A E
Sbjct: 221 RDSLADATVVPTPGAVLLASELLARGTYDQEGVGSLILIDLGGATTDIHS-ALPELEKLA 279
Query: 237 VITKGL----PEPYSKRTVEGDLGMRYSLTAM-----------ADEMNMEVFADELGIEQ 281
+ +GL + +S RTVEG+LG+R S T + A +++ +V DE+
Sbjct: 280 IEERGLVINNEKQFSYRTVEGNLGLRVSATGIPEAVGPKAIIRAMDLDCDVTPDEVLAFA 339
Query: 282 SKIEDWIKRCVAAPATLPQTDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVF--T 339
+K+E A P +PQ ++E +E+ +A A+ A+ RH G++ P+ +
Sbjct: 340 AKLE-------AHPDYIPQGEKEQSMERAMATCAISTALRRHAGHYAEVADPVMGIMAGA 392
Query: 340 LTGKDLSEVPYIVGIGGSIKNNTDPEQILSGAEKKASRDPMFA--KPKAPKYMLDKKYIF 397
G+DL V ++ +GG I ++D E+ L G ++ DP + PK +LD+ Y+
Sbjct: 393 AMGRDLRNVEKVLCVGG-IFVHSDKEKAL-GMVERCFEDPGISLLPLNLPKVILDRSYLL 450
Query: 398 ASMGLLSTFEPHLALAIMKKEITE 421
+MG+L P AL+ +K+ + +
Sbjct: 451 YAMGVLGKHYPDAALSFLKEYVNQ 474
>gi|126698021|ref|YP_001086918.1| putative component of D-ornithine aminomutase [Clostridium
difficile 630]
gi|115249458|emb|CAJ67273.1| putative component of D-ornithine aminomutase [Clostridium
difficile 630]
Length = 469
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 137/386 (35%), Positives = 216/386 (55%), Gaps = 18/386 (4%)
Query: 20 YDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSFEISQAEQQEIYDI 79
Y+ + SSAAGGLKM GLV ++T KAAK AA AGA + + S I + + +I +I
Sbjct: 75 YNDMFATSSAAGGLKMTVHGLVYDMTVKAAKEAALGAGAVIRQITSGRIKRTDLNKIKEI 134
Query: 80 NPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIFKASNKKKCV 139
NP+++L+ GG D G +D + NA+ + +++ +I AGN E+ IF+ +N K
Sbjct: 135 NPNIILIAGGVDYGERDTAIYNAEMIASMNLGIPVIYAGNVENQEEIRLIFEDTN-YKLY 193
Query: 140 ITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLTGCELF 199
ITENV P+ +++NI P ++ I+ +F I A G+ I+EM +I PTP AV+ +L
Sbjct: 194 ITENVYPKIDLLNIEPTRRIIQSVFEEHITTAPGMKYIKEMVNENITPTPGAVMEASKLL 253
Query: 200 SKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGDLGMRY 259
K +GD++ +D+GGATTD++S+ G I +++ PEP +KR+VEGDLG+
Sbjct: 254 YK------NIGDLLTLDVGGATTDVHSVTDGSDYINKILVN--PEPTAKRSVEGDLGVYV 305
Query: 260 SLTAMADEMNMEVFADELGIE-QSKIEDWIKRCVAAPATLPQTDEEARIEQGLARNAVKV 318
++ + + + E EL I+ + IE++ +P++ EE + L + AV
Sbjct: 306 NMKNIVEVIGKENLQSELSIDIDAVIENY--------PPIPKSKEEILFVERLTKEAVVK 357
Query: 319 AVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKNNTDPEQILSGAEKKASRD 378
A+ RH G + G+V GKDL+EV YIVG GG++ +IL K +
Sbjct: 358 AMLRHSGKIRNIYGTTGKVKIAEGKDLTEVRYIVGTGGALTRLPSRIEILDNMLKYNKNN 417
Query: 379 PMFAKPKAPKYMLDKKYIFASMGLLS 404
+ + K ++D YI ASMG+LS
Sbjct: 418 ELLFPKEKTKILIDNDYIMASMGVLS 443
>gi|145955875|ref|ZP_01804875.1| hypothetical protein CdifQ_04000470 [Clostridium difficile
QCD-32g58]
Length = 469
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 137/386 (35%), Positives = 216/386 (55%), Gaps = 18/386 (4%)
Query: 20 YDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSFEISQAEQQEIYDI 79
Y+ + SSAAGGLKM GLV ++T KAAK AA AGA + + S I + + +I +I
Sbjct: 75 YNDMFATSSAAGGLKMTVHGLVYDMTVKAAKEAALGAGAVIRQITSGRIKRTDLNKIKEI 134
Query: 80 NPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIFKASNKKKCV 139
NP+++L+ GG D G +D + NA+ + +++ +I AGN E+ IF+ +N K
Sbjct: 135 NPNIILIAGGVDYGERDTAIYNAEMIASMNLGIPVIYAGNVENQEEIRLIFEDTN-YKLY 193
Query: 140 ITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLTGCELF 199
ITENV P+ +++NI P ++ I+ +F I A G+ I+EM +I PTP AV+ +L
Sbjct: 194 ITENVYPKIDLLNIEPTRRIIQSVFEEHITTAPGMKYIKEMVNENITPTPGAVMEASKLL 253
Query: 200 SKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGDLGMRY 259
K +GD++ +D+GGATTD++S+ G I +++ PEP +KR+VEGDLG+
Sbjct: 254 YK------NIGDLLTLDVGGATTDVHSVTDGSDYINKILVN--PEPTAKRSVEGDLGVYV 305
Query: 260 SLTAMADEMNMEVFADELGIE-QSKIEDWIKRCVAAPATLPQTDEEARIEQGLARNAVKV 318
++ + + + E EL I+ + IE++ +P++ EE + L + AV
Sbjct: 306 NMKNIVEVIGKENLQSELYIDIDAVIENY--------PPIPKSKEEILFVERLTKEAVVK 357
Query: 319 AVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKNNTDPEQILSGAEKKASRD 378
A+ RH G + G+V GKDL+EV YIVG GG++ +IL K +
Sbjct: 358 AMLRHSGKIRNIYGTTGKVKIAEGKDLTEVRYIVGTGGALTRLPSRIEILDNMLKYNKNN 417
Query: 379 PMFAKPKAPKYMLDKKYIFASMGLLS 404
+ + K ++D YI ASMG+LS
Sbjct: 418 ELLFPKEKTKILIDNDYIMASMGVLS 443
>gi|150020219|ref|YP_001305573.1| hypothetical protein Tmel_0316 [Thermosipho melanesiensis BI429]
gi|149792740|gb|ABR30188.1| hypothetical protein Tmel_0316 [Thermosipho melanesiensis BI429]
Length = 455
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 141/424 (33%), Positives = 237/424 (55%), Gaps = 21/424 (4%)
Query: 3 GFNNGMQQLEAQIG--HFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKV 60
G + +L+ +IG + ++ + SSAAGGLKM GLV ++T +AA+ AA AGA +
Sbjct: 47 GIEKAIARLKEKIGEKNISWSKFAASSSAAGGLKMTVHGLVYDMTVRAAREAALGAGAVI 106
Query: 61 VKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNK 120
+ ++ + Q+I +I P L+LL GG D G K+ ++ NAK L ++ D II AGN
Sbjct: 107 KYVTAGKMDEFHIQKILEIQPKLILLAGGVDYGEKETVIYNAKILSKLELDIPIIYAGNI 166
Query: 121 TASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEM 180
A+ ++ I K++ K +TENV P+ + +N+ P + IKE+F I +A G+ +I ++
Sbjct: 167 AAAEHVEYILKSAG-KTVFVTENVYPKIDQLNVEPTRNIIKEVFAQHITKAPGMEKIYDI 225
Query: 181 SGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITK 240
Y I TP AV+ +L S+ Y GD++ VD+GGATTDI S+ +G I E++
Sbjct: 226 VDYKIHTTPGAVMKTTQLLSEIY------GDVLTVDIGGATTDIDSVTEGSVEIQEIMIS 279
Query: 241 GLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQ 300
PEP +KRTVEGDLG+ + + + M E +E S++++ I + P+
Sbjct: 280 --PEPTAKRTVEGDLGLFVNARNVINLMGEENLREEFP-NLSELKERI-------SPYPK 329
Query: 301 TDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKN 360
+DE+ + LA + + RH G + +TP+G+ GKDLS V ++ G GG +
Sbjct: 330 SDEDEKFISRLALYCFQQGIRRHVGVKKHIYTPLGRKLVAEGKDLSAVRFLFGTGGFLSR 389
Query: 361 NTDPEQILSGAEKKASRDPMFAKPKAP-KYMLDKKYIFASMGLLST-FEPHLALAIMKKE 418
+ +++L + PM P+ + DK YIFA++G+++T + ++A I++K
Sbjct: 390 SKYADKVLKSINTLSKLHPMELLPQNEVEIYRDKHYIFAAIGVIATEIDKNIARKILEKN 449
Query: 419 ITEI 422
+ ++
Sbjct: 450 LEKL 453
>gi|86278273|gb|ABC88405.1| putative repair enzyme for 2-methyleneglutarate mutase [Eubacterium
barkeri]
Length = 480
Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 140/417 (33%), Positives = 233/417 (55%), Gaps = 19/417 (4%)
Query: 19 AYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSF-EISQAEQQEIY 77
Y R CS AAGGL+MVA+G +P++TAKAAK A +AGA+V++ S E + ++ ++
Sbjct: 63 GYKRYSSCS-AAGGLRMVAMGYMPKVTAKAAKEVAMTAGARVMEVISVDEPPEFREEVLH 121
Query: 78 DINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIFKASNKKK 137
+I PD++LL GGTD G++ L NA+ +C ++I A N+ A + + +
Sbjct: 122 EIRPDIILLAGGTDNGDESSALENAEIICRAKVTATVIVACNQVAQRRVVRLLTKAGIPS 181
Query: 138 CVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRI-QEMSGYDIIPTPLAVLTGC 196
I N++P + +N PA++ I FI +I +A+G+ + +S ++IPTP AV
Sbjct: 182 IRIP-NIIPTIHELNTVPAREAIHSQFIKQITQARGVQEFCKTLSNQEVIPTPGAVFFAS 240
Query: 197 ELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGL----PEPYSKRTVE 252
EL +KG EG+G +M +D+GGATTDI+S A E ++ +GL + YS RTVE
Sbjct: 241 ELLAKGIYGKEGIGSLMLIDIGGATTDIHS-AIPELLELKIEERGLLINNEKQYSYRTVE 299
Query: 253 GDLGMRYSLTAMADEMNME---VFADELGIEQSKIEDWIKRCVAAPATLPQTDEEARIEQ 309
G+LGMR S + D + +E +A G+ ++ I D+I+R P +PQ+++E ++
Sbjct: 300 GNLGMRISAGGVLDIVGVENLLTYAGP-GVGETDIIDYIERVEEQPDHIPQSEKEKAMDH 358
Query: 310 GLARNAVKVAVERHCGYFEPAFTPMGQVF--TLTGKDLSEVPYIVGIGGSIKNNTDPE-- 365
+A A+ +++ RH G++ + V T G+DL + IV GG + N TD E
Sbjct: 359 AIATCAINLSIRRHAGFYAKENDAVMGVMAGTAMGRDLRYIKNIVCSGGVLVNATDEEKR 418
Query: 366 QILSGAEKKASRDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLALAIMKKEITEI 422
+I++ A + + + P+ + D+ Y+ ++G+LS + P L M +E I
Sbjct: 419 EIITHAFENPGNSLL--PIQEPRLIYDEHYLLFALGVLSKWYPEAVLDFMLEEWKNI 473
>gi|157083856|gb|ABV13534.1| hypothetical protein CKO_02417 [Citrobacter koseri ATCC BAA-895]
Length = 462
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 127/333 (38%), Positives = 187/333 (56%), Gaps = 11/333 (3%)
Query: 27 SSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSFEISQAEQQEIYDINPDLVLL 86
SSA GGL + A+GLVP +T ++AK+ A SAGAK+ + Y++++++ + Q + + PD++L
Sbjct: 72 SSAKGGLAVAAMGLVPSITLESAKVTAHSAGAKIAQYYAYKLNRHDIQALENSPPDILLF 131
Query: 87 CGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIFKASNKKKCVITENVMP 146
GGTDGG + LANA+ L + D +II AGN+ E+ I K +N++P
Sbjct: 132 TGGTDGGEESYGLANARALANSNLDCAIIYAGNRDIQDEVQAIL---GHKDLTTVDNILP 188
Query: 147 QFNVININPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLTGCELFSKGYGRD 206
+ N A+Q I +LF+SRI++ KGL I +G + +PTP V EL D
Sbjct: 189 DLDHPNPYAARQAICDLFLSRIVKGKGLDVIVGETGEEPMPTPWTVY---ELVKAISDID 245
Query: 207 EGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGDLGMRYSLTAMAD 266
+ M +D+GGATTD+YS A + + G+PEP+ KRTVEGDLGMR S + +
Sbjct: 246 SAWKEFMLIDMGGATTDVYS-ACANMLSPDTVLHGVPEPFVKRTVEGDLGMRVSALVVGE 304
Query: 267 ---EMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQTDEEARIEQGLARNAVKVAVERH 323
EM VFA + Q +++ V+ P LP++DEE + LA V A ERH
Sbjct: 305 STQEMVNVVFAQQPE-RQEAFYGYLRHLVSHPDYLPRSDEEKFFDALLAGLCVGYASERH 363
Query: 324 CGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGG 356
G + T +G V G+DL+ V +VG GG
Sbjct: 364 AGTKKQVCTCVGNVDLQMGRDLTTVRKVVGSGG 396
>gi|123444215|ref|YP_001008183.1| glutamate mutase [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|122091176|emb|CAL14059.1| glutamate mutase [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 463
Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 123/336 (36%), Positives = 191/336 (56%), Gaps = 17/336 (5%)
Query: 27 SSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSFEISQAEQQEIYDINPDLVLL 86
SSA GGL + A+GLVP +T ++AK+ A SAGAKV + +++ +++++ + + PD++L
Sbjct: 73 SSAKGGLAVAAIGLVPSITLESAKVTAHSAGAKVSQHFAYNLNKSDVRALEVSPPDILLF 132
Query: 87 CGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIFKASNKKKCVITENVMP 146
GGTDGG+ D L NAK L + + +II AGN+ ++ EI K I +NV+P
Sbjct: 133 TGGTDGGDYDHGLLNAKLLAQSNLECAIIYAGNRDLQDDVQEIL---GDKDLTIVDNVLP 189
Query: 147 QFNVININPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLTGCELFSKGYGRD 206
+ N + A++ I ++F+ +I++ KGL I +++G D +PTP +V EL +
Sbjct: 190 NLDSPNPHSARKAICDIFLHKIVKGKGLDVIVDLTGEDPLPTPYSVF---ELVQQIRQHV 246
Query: 207 EGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGDLGMRYSLTAMAD 266
M +D+GGATTD+YS + + + + G+PEP KRTVEGDLGMR S +
Sbjct: 247 PDWETFMLIDMGGATTDVYS-SYNNHLLPDTVMHGIPEPLIKRTVEGDLGMRVSALNSGE 305
Query: 267 EMNMEV---FADELGIEQSKIE---DWIKRCVAAPATLPQTDEEARIEQGLARNAVKVAV 320
M + FA +Q+KI+ ++K A P LPQ+DEE +Q LA + A
Sbjct: 306 TGTMMIDHYFAH----QQTKIDAFHHYLKYISAHPDYLPQSDEEIVFDQLLAGMCIGYAS 361
Query: 321 ERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGG 356
ERH G T G + G+DL++V ++G GG
Sbjct: 362 ERHAGTKTQVCTCAGNIDLQIGRDLTQVKKVIGTGG 397
>gi|15800443|ref|NP_286455.1| hypothetical protein Z0894 [Escherichia coli O157:H7 EDL933]
gi|15830017|ref|NP_308790.1| putative glutamate mutase L [Escherichia coli O157:H7 str. Sakai]
gi|12513657|gb|AAG55063.1|AE005251_12 putative enzyme; Not classified [Escherichia coli O157:H7 EDL933]
gi|13360222|dbj|BAB34186.1| putative glutamate mutase L [Escherichia coli O157:H7 str. Sakai]
Length = 462
Score = 201 bits (510), Expect = 9e-50, Method: Composition-based stats.
Identities = 125/333 (37%), Positives = 182/333 (54%), Gaps = 11/333 (3%)
Query: 27 SSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSFEISQAEQQEIYDINPDLVLL 86
SSA GGL + A+GLVP +T + AK+ A SAGAK+ + Y++++++ + Q + + PD++L
Sbjct: 72 SSAKGGLAVAAMGLVPSITLETAKVTAHSAGAKIAQYYAYKLNRRDIQALEETQPDILLF 131
Query: 87 CGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIFKASNKKKCVITENVMP 146
GGTDGG + L NA+ L D +II AGN+ E+ EI K I +NV+P
Sbjct: 132 TGGTDGGEESYGLNNARVLAESKLDCAIIYAGNRDIQDEVQEIL---GHKDLTIVDNVLP 188
Query: 147 QFNVININPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLTGCELFSKGYGRD 206
+ N A+Q I ++F+ RI++ KGL I + +G + +PTP V EL D
Sbjct: 189 DLDHPNPVAARQAICDIFLKRIVKGKGLDVIVDKTGEEPMPTPWTVF---ELVKAISNVD 245
Query: 207 EGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGDLGMRYSLTAM-- 264
+ M +D+GGATTD+YS A + + G+PEP+ KRTVEGDLGMR S +
Sbjct: 246 HSWKEFMLIDMGGATTDVYS-ACANTLSPDTVLHGVPEPFVKRTVEGDLGMRVSAVVVGE 304
Query: 265 -ADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQTDEEARIEQGLARNAVKVAVERH 323
A E+ FA + + +++ VA P LP EE + LA V A ERH
Sbjct: 305 SAKELVNVNFAQQPA-QLDAFYHYLRHLVAHPDYLPANAEEKYFDTVLAGLCVGYATERH 363
Query: 324 CGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGG 356
G + T +G V G+DL+ V +VG GG
Sbjct: 364 AGTKKEVCTCVGNVDLQMGRDLTTVRKVVGSGG 396
>gi|77975620|ref|ZP_00831155.1| hypothetical protein YfreA_01000780 [Yersinia frederiksenii ATCC
33641]
Length = 463
Score = 201 bits (510), Expect = 9e-50, Method: Composition-based stats.
Identities = 128/333 (38%), Positives = 187/333 (56%), Gaps = 11/333 (3%)
Query: 27 SSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSFEISQAEQQEIYDINPDLVLL 86
SSA GGL + A+GLVP +T ++AK+AA SAGAKV + +S+ +++++ + + PD++L
Sbjct: 73 SSAKGGLSVAAIGLVPNITLESAKVAAHSAGAKVSQHFSYNLNKSDVRALEASPPDILLF 132
Query: 87 CGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIFKASNKKKCVITENVMP 146
GGTDGG+ + L NAK L + + +II AGN+ ++ EI K+ I +NV+P
Sbjct: 133 TGGTDGGDCNHGLLNAKLLAQSNLECAIIYAGNRDLDDDVQEIL---GNKELTIVDNVLP 189
Query: 147 QFNVININPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLTGCELFSKGYGRD 206
+ N A++ I ++F+ +I++ KGL I +G + +PTP +V EL +
Sbjct: 190 NLDSPNPYGARKAICDIFLHKIVKGKGLDVIVNQTGEEPLPTPYSVF---ELVQQIRLHV 246
Query: 207 EGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGDLGMRYSLTAMAD 266
M +D+GGATTDIYS + + + I G+PEP KRTVEGDLGMR S + A
Sbjct: 247 PEWETFMLIDMGGATTDIYS-SYNNHLMPDTIMHGIPEPLIKRTVEGDLGMRVSALS-AG 304
Query: 267 EMNMEVFADELGIEQSKIE---DWIKRCVAAPATLPQTDEEARIEQGLARNAVKVAVERH 323
E + +Q KIE ++K A P LP+TDEE +Q LA V A ERH
Sbjct: 305 ETGRPMIEHYFAHQQGKIEAFHAYLKHITAHPGYLPRTDEECVFDQLLAGICVGYASERH 364
Query: 324 CGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGG 356
G T G V G+DLS V ++G GG
Sbjct: 365 AGTKTQVCTCTGNVDLQLGRDLSLVKKVIGTGG 397
>gi|82776005|ref|YP_402352.1| putative glutamate mutase L [Shigella dysenteriae Sd197]
gi|81240153|gb|ABB60863.1| putative glutamate mutase L [Shigella dysenteriae Sd197]
Length = 462
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 124/333 (37%), Positives = 181/333 (54%), Gaps = 11/333 (3%)
Query: 27 SSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSFEISQAEQQEIYDINPDLVLL 86
SSA GGL + A+GLVP +T + AK+ A SAGAK+ + Y++++++ + Q + + PD++L
Sbjct: 72 SSAKGGLAVAAMGLVPSITLETAKVTAHSAGAKIAQYYAYKLNRRDIQALEETQPDILLF 131
Query: 87 CGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIFKASNKKKCVITENVMP 146
G TDGG + L NA+ L D +II AGN+ E+ EI K I +NV+P
Sbjct: 132 TGDTDGGEESYGLNNARVLAESKLDCAIIYAGNRDIQDEVQEIL---GHKDLTIVDNVLP 188
Query: 147 QFNVININPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLTGCELFSKGYGRD 206
+ N A+Q I ++F+ RI++ KGL I + +G + +PTP V EL D
Sbjct: 189 DLDHPNPLAARQAICDIFLKRIVKGKGLDVIVDKTGEEPMPTPWTVF---ELVKAISNVD 245
Query: 207 EGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGDLGMRYSLTAM-- 264
+ M +D+GGATTD+YS A + + G+PEP+ KRTVEGDLGMR S +
Sbjct: 246 HNWKEFMLIDMGGATTDVYS-ACANTLSPDTVLHGVPEPFVKRTVEGDLGMRVSAVVVGE 304
Query: 265 -ADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQTDEEARIEQGLARNAVKVAVERH 323
A E+ FA + + +++ VA P LP EE + LA V A ERH
Sbjct: 305 SAKELVNVNFAQQPA-QLDAFYHYLRHLVAHPDYLPANAEEKYFDTVLAGLCVGYATERH 363
Query: 324 CGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGG 356
G + T +G V G+DL+ V +VG GG
Sbjct: 364 AGTKKEVCTCVGNVDLQMGRDLTTVRKVVGSGG 396
>gi|77976543|ref|ZP_00832026.1| COG0516: IMP dehydrogenase/GMP reductase [Yersinia intermedia ATCC
29909]
Length = 463
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 125/334 (37%), Positives = 184/334 (55%), Gaps = 13/334 (3%)
Query: 27 SSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSFEISQAEQQEIYDINPDLVLL 86
SSA GGL + A+GLVP +T ++AK+ A SAGAKV + +++ +++++ + + PD++L
Sbjct: 73 SSAKGGLAVAAIGLVPNITLESAKVTAHSAGAKVSQHFAYNLNKSDVRALEASPPDILLF 132
Query: 87 CGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIFKASNKKKCVITENVMP 146
GGTDGG+ L+NAK L SII AGN+ D++ + K I NV+P
Sbjct: 133 TGGTDGGDYSHGLSNAKLLAQSKLKCSIIYAGNRDLQ---DDVLEILGDKDLTIVNNVLP 189
Query: 147 QFNVININPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLTGCELFSKGYGRD 206
+ N A++ I +F+ +II KGL I + +G D +PTP +V EL +
Sbjct: 190 NLDSPNPFDARKAICNIFLKKIIRGKGLDVIVDQTGEDPLPTPYSVF---ELVQQIRQYV 246
Query: 207 EGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGDLGMRYSLTAM-A 265
M +D+GGATTD+YS + + + + G+PEP KRTVEGDLGMR S AM A
Sbjct: 247 PDWETFMLIDMGGATTDVYS-SYNSHMLPDTVIHGIPEPLIKRTVEGDLGMRVS--AMNA 303
Query: 266 DEMNMEVFADELGIEQSKIE---DWIKRCVAAPATLPQTDEEARIEQGLARNAVKVAVER 322
E M + A +Q++I+ ++ A P LP++DEE +Q LA V A ER
Sbjct: 304 GETGMPMIAHYFSHQQNQIDAFYRYLTHVTAHPGYLPRSDEEIVFDQLLAGICVGYATER 363
Query: 323 HCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGG 356
H G T G + G+DLS V ++G GG
Sbjct: 364 HAGKKTQVCTCAGNIDLQVGRDLSLVKKVIGTGG 397
>gi|50843718|ref|YP_056945.1| methylaspartate mutase [Propionibacterium acnes KPA171202]
gi|50841320|gb|AAT83987.1| methylaspartate mutase [Propionibacterium acnes KPA171202]
Length = 476
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 129/386 (33%), Positives = 205/386 (53%), Gaps = 34/386 (8%)
Query: 27 SSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSFEISQAEQQEIYDINPDLVLL 86
SSAAGGL+M GL +TA+AA+ AA AGA V T + + + +++ + P ++LL
Sbjct: 71 SSAAGGLRMSVHGLTRSMTARAAREAALGAGAIVTMTTVGAMDEFDLEDLQENRPSIILL 130
Query: 87 CGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIF-KASNKKKCVITENVM 145
GG D G K +++ NAK + + ++ AGN ++ IF A CV +NV
Sbjct: 131 AGGVDDGEKRIVVENAKVIASAQLGVPVVYAGNSRVRRRVEHIFVDAGQPLTCV--DNVF 188
Query: 146 PQFNVININPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLTGCELFSKGYGR 205
P +V+ + P + I ++F I A G+ + E++ ++I+PTP AVL ELF+
Sbjct: 189 PDVDVLRVEPVRAVIHDVFNDHITAAPGMHGLVELTNHEILPTPGAVLLATELFA----- 243
Query: 206 DEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGDLGMRYS---LT 262
+ VGD + VD+GGATTD++S+ G + + PEP +KRTVEGDLG+ + +
Sbjct: 244 -DAVGDAVVVDVGGATTDVHSVTDGSSEWSARVID--PEPRTKRTVEGDLGVFVNARRVA 300
Query: 263 AMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQTDEEARIEQGLARNAVKVAVER 322
AM DE G ++ ++E W++ +P + EA + + LAR AV+ V R
Sbjct: 301 AMTDE----------GEDEERLE-WLR-------AIPSDEREAEVTRWLAREAVEAGVGR 342
Query: 323 HCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKNNTDPEQILSGAEKKASRDPMFA 382
H G FTP G+ + GKDLS V ++VG GG++ IL A +
Sbjct: 343 HAGTVTEIFTPTGKTQVVRGKDLSAVRWVVGTGGALTRVPGGADILRRICTGAGAQ-LLP 401
Query: 383 KPKAPKYMLDKKYIFASMGLLSTFEP 408
P+A ++D+ Y F+++G ++ P
Sbjct: 402 SPEA-TIVIDRDYRFSALGTVAQCYP 426
>gi|84497868|ref|ZP_00996665.1| glutamate mutase, mutL [Janibacter sp. HTCC2649]
gi|84381368|gb|EAP97251.1| glutamate mutase, mutL [Janibacter sp. HTCC2649]
Length = 441
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 129/413 (31%), Positives = 201/413 (48%), Gaps = 27/413 (6%)
Query: 1 MEGFNNGMQQLEAQIGHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKV 60
M+G + ++L + H L CSSA GGL++ +G E+TA+A A SAG +V
Sbjct: 46 MDGVDRVCRELAS---HGPVTETLVCSSAGGGLRIAVVGYEREVTAEAGHRVALSAGGRV 102
Query: 61 VKTYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNK 120
V S ++ +E+ PDLVLL GGTDGGN +V+ NA RL + I+ AGN
Sbjct: 103 VHVSSGSLTGEGVRELRAAAPDLVLLVGGTDGGNAEVLRHNATRLASARVTMPIVVAGNA 162
Query: 121 TASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEM 180
+ E+ A ++ +T NV+P+ VI + A+ I+ F+ +I KGLSR +
Sbjct: 163 DVADEVSAEL-ARTGRRHTVTSNVLPRIGVIAPDAARGAIRAAFLEHVIGGKGLSRGRGF 221
Query: 181 SGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITK 240
+ TP AVL G EL + G D+M +D+GGATTD+YS+ + + AE+
Sbjct: 222 TELVRAATPDAVLQGVELLADVRGE-----DVMVIDIGGATTDVYSVLRPQGEDAEIERD 276
Query: 241 GLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQ 300
+ +RTVE DLGMR++ + + + E + G ++ ++ + A A+ P
Sbjct: 277 VAGSMWHERTVEADLGMRWNALGVVEAASREHLSLSSGTQEYAVQ--VTSDTAHRASTPG 334
Query: 301 TDEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKN 360
E E LAR A VA RH P +V + L++V ++G GG +++
Sbjct: 335 EWEH---EAELARVAATVAARRHG---RP------RVVGDRPRPLADVGLVLGSGGVLRH 382
Query: 361 NTDPEQILSGAEKKASRDPM--FAKPKAPKYMLDKKYIFASMGLLSTFEPHLA 411
P+ + G D + P A +D Y+ + GLL+ P A
Sbjct: 383 G--PDAVAGGVLNAVVTDHAGGWTVPAAAAQAVDTAYLLFACGLLAQGHPAAA 433
>gi|119715221|ref|YP_922186.1| hypothetical protein Noca_0977 [Nocardioides sp. JS614]
gi|119535882|gb|ABL80499.1| conserved hypothetical protein [Nocardioides sp. JS614]
Length = 443
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 131/395 (33%), Positives = 205/395 (51%), Gaps = 32/395 (8%)
Query: 23 LLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSFEISQAE----QQEIYD 78
+L CSSA GGL++ +G +TA+A + A S+G KVV + A+ + +
Sbjct: 62 VLACSSAGGGLRIAVVGNEELVTAEAGRRVALSSGGKVVAVLAAASRAADSAAWRTLSHT 121
Query: 79 INPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIFKASNKKKC 138
PD+VLL GGTDGGN +V+L A+ L ++ AGN A E+ I A
Sbjct: 122 TRPDVVLLTGGTDGGNSEVLLEAARGLVAGGWTGPVVVAGNVDARAEVGAILGAVPH--- 178
Query: 139 VITENVMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLTGCEL 198
V+ +NV+PQ V+ A+ ++E+F++ +I K LS + +G TP VLTG E+
Sbjct: 179 VLADNVVPQIGVLAPESARTAVREMFLAHVIGGKHLSARSDFAGMVRGATPDVVLTGVEV 238
Query: 199 FSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGDLGMR 258
+ G VGD++ VD+GGATTD++S+ + +P V + + RTVEGDLGMR
Sbjct: 239 LATG------VGDVVVVDVGGATTDVHSVVELDPD--SVGREVVATTRVTRTVEGDLGMR 290
Query: 259 YSLTAMADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQTDEEARIEQGLARNAVKV 318
+S + ++ ++ D +R PA LP TD E ++ +AR AV +
Sbjct: 291 WSALSTVTDL-------------PELADAARRRHDDPAFLPDTDAERDADEQIARAAVGL 337
Query: 319 AVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKNNTD--PEQILSGAEKKAS 376
A+ RH G + +P G+V TGKDL V +VG GG +++ ++L+G+
Sbjct: 338 ALRRHAGRSKVVLSPEGRVVERTGKDLRRVGLLVGSGGVLRHGRPGVAGRVLAGSTGDVG 397
Query: 377 RDPMFAKPKAPKYMLDKKYIFASMGLLSTFEPHLA 411
+ P P+ ++D Y+ A+ GLL+ P A
Sbjct: 398 GG--WQLPSHPRVVVDDDYVLAAAGLLAAAHPEAA 430
>gi|119882057|ref|ZP_01648341.1| conserved hypothetical protein [Salinispora arenicola CNS205]
gi|119825025|gb|EAX27582.1| conserved hypothetical protein [Salinispora arenicola CNS205]
Length = 445
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 118/389 (30%), Positives = 181/389 (46%), Gaps = 16/389 (4%)
Query: 26 CSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSFEISQAEQQEIYDINPDLVL 85
CSSA GGL++ +G +TA+A + SAGA VV + + A + PD++L
Sbjct: 65 CSSAGGGLRLAVVGYEHLVTAQAGRRVGLSAGANVVHVAAGRLGAAGLAAVRAARPDVLL 124
Query: 86 LCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIFKASNKKKCVITENVM 145
L GGTDGG+ + + NA RL ++ AGN +L + S + ENV+
Sbjct: 125 LVGGTDGGDAETLTHNATRLARARWRVPVVLAGNADVREDLRGLL-VSAGVPVTVAENVL 183
Query: 146 PQFNVININPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLTGCELFSKGYGR 205
P+ V A+ I+E+F+ +I K LSR Q TP AVLTG EL + G
Sbjct: 184 PRIGVSAPAGARAAIREVFLRHVIGGKRLSRGQRFPRLVRAATPDAVLTGVELLADTLG- 242
Query: 206 DEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGDLGMRYSLTAMA 265
GD++ VD+GGATTD+YS+ + + + RTVEGDLG+R+S +
Sbjct: 243 ----GDLVVVDVGGATTDVYSVLTPDERETGPGREVAGSLWRARTVEGDLGVRWSAPGVV 298
Query: 266 DEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQTDEEARIEQGLARNAVKVAVERHCG 325
E D + + +R P LP + E + + A VA+ RH
Sbjct: 299 RAAVEERLLD--AGDAEALAVAARRRAEDPGYLPVRESERAADARIGALAATVALRRHA- 355
Query: 326 YFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKNNTDPEQILSGAEKKASRDPMFAKPK 385
G+ G+DL +V +VG GG +++ + + A A + P+
Sbjct: 356 ----RGAATGE---RAGRDLRDVRLLVGSGGVLRHAAPADAVGMLAGVLADHGGGWPLPR 408
Query: 386 APKYMLDKKYIFASMGLLSTFEPHLALAI 414
A + ++D Y+ A+ GLL+ P A A+
Sbjct: 409 AARPVVDVDYVLAAAGLLAGEHPVAARAL 437
>gi|76797606|ref|ZP_00779893.1| methylaspartate mutase [Thermoanaerobacter ethanolicus ATCC 33223]
gi|76587029|gb|EAO63514.1| methylaspartate mutase [Thermoanaerobacter ethanolicus ATCC 33223]
Length = 252
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 89/265 (33%), Positives = 142/265 (53%), Gaps = 18/265 (6%)
Query: 152 NINPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLTGCELFSKGYGRDEGVGD 211
N+ P ++ I+++F I+ A G+S+++E+ +IIPTP AV+ L +GD
Sbjct: 1 NVEPTRKMIQKVFEKHIVTAPGMSKVKELVTGNIIPTPGAVMECAILLYND------IGD 54
Query: 212 MMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGDLGMRYSLTAMADEMNME 271
+M VD+GGATTD++S+ +G I ++ PEP +KRTVEGDLG+ + + D +
Sbjct: 55 LMVVDIGGATTDVHSVTEGSDEIQKITVN--PEPLAKRTVEGDLGVFVNSRNLFDLCGED 112
Query: 272 VFADELGIEQSKIEDWIKRCVAAPATLPQTDEEARIEQGLARNAVKVAVERHCGYFEPAF 331
++ + S E+ I +PQT+EE LA A++VAV+RH G F
Sbjct: 113 IYK-----KFSNAEELINNI----KPIPQTEEEKEFVIYLASKALEVAVKRHAGKLSSYF 163
Query: 332 TPMGQVFTLTGKDLSEVPYIVGIGGSIKNNTDPEQILSGAEKKASRDPMFAKPKAPKYML 391
P G+ F G+DL+ V +I+G GG E++L S ++ P + K ++
Sbjct: 164 GPTGRTFYAEGRDLTNVKWIIGTGGIFSRLEGGEKLLENINDGGSGKELYP-PSSAKVLI 222
Query: 392 DKKYIFASMGLLSTFEPHLALAIMK 416
D+ YI A G+LS P AL ++K
Sbjct: 223 DRDYIMAVCGVLSKKYPDEALKLIK 247
>gi|91200842|emb|CAJ73896.1| hypothetical protein [Candidatus Kuenenia stuttgartiensis]
Length = 602
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 104/332 (31%), Positives = 170/332 (51%), Gaps = 36/332 (10%)
Query: 6 NGMQQLEAQIGHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGA---KVVK 62
+G + + G+ D + SSA GGL+M+ G V +TA++A+ AA AGA V+
Sbjct: 73 DGEKIITPASGNVGVDIYVSTSSAGGGLQMMVAGAVKTMTAESAQRAALGAGAIVMDVIA 132
Query: 63 TYSFEISQAEQQEIYDINPDLVLLCGGTDGGN--------KDVILANAKRLCTIDRDFSI 114
+ + + I + PD++LL GGTDGG + + AN + + I
Sbjct: 133 SNDKRLPHEKIDRIRHLRPDMILLSGGTDGGTVTHVVELAEYIAAANPRPRLGMSFQLPI 192
Query: 115 IAAGNKTASYELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRII-EAKG 173
+ AGNK ++ EI K ITEN+ P N+ PA+Q+I++LF+ ++ +A G
Sbjct: 193 VYAGNKDVRQKITEIL--GEKTSLHITENLRPTLERENLFPARQEIQKLFLEHVMAQAPG 250
Query: 174 LSRIQEMSGYDIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPT 233
+ +G I+PTP AV + +K RD +++ VD+GGATTD++S+
Sbjct: 251 YKTLMTWTGAPIMPTPAAVGLIMQTIAK---RDNI--NVVGVDIGGATTDVFSV------ 299
Query: 234 IAEVITKGLPEPYSKRTVEGDLGMRYSLTAMADEMNMEVFAD--ELGIEQSKIEDWIKRC 291
EV RTV +LGM YS++ + E + IE+S + + IK
Sbjct: 300 YGEVFN---------RTVSANLGMSYSVSNVLAEAGLPNILRWMPFDIEESDLRNRIKNK 350
Query: 292 VAAPATLPQTDEEARIEQGLARNAVKVAVERH 323
+ P T+PQT +E +IEQ L+R A++++ ++H
Sbjct: 351 MIRPTTIPQTLDELKIEQALSREALRLSFDQH 382
>gi|145594799|ref|YP_001159096.1| hypothetical protein Strop_2268 [Salinispora tropica CNB-440]
gi|145304136|gb|ABP54718.1| hypothetical protein Strop_2268 [Salinispora tropica CNB-440]
Length = 469
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 125/388 (32%), Positives = 185/388 (47%), Gaps = 26/388 (6%)
Query: 26 CSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVKTYSFEISQAEQQEIYDINPDLVL 85
CSSA GGL++ +G +TA+A + SAGA VV + + AE + PD++L
Sbjct: 65 CSSAGGGLRLAVVGYEQLVTAQAGRRVGLSAGANVVYVAAGRLGAAELAAVRAARPDVLL 124
Query: 86 LCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGNKTASYELDEIFK--ASNKKKCVITEN 143
L GGTDGG+ + + NA RL ++ AGN D++F S K + EN
Sbjct: 125 LVGGTDGGDAETLTHNATRLARARWRVPVVLAGNAEVR---DDLFSMLVSAKVPVTVAEN 181
Query: 144 VMPQFNVININPAKQKIKELFISRIIEAKGLSRIQEMSGYDIIPTPLAVLTGCELFSKGY 203
V+P+ V+ A+ I+E+F+ +I K LSR TP AVLTG EL +
Sbjct: 182 VLPRIGVLAPAGARAAIREVFLRHVIGGKRLSRGPRFPRLVRAATPDAVLTGVELLADTL 241
Query: 204 GRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTVEGDLGMRYSLTA 263
G GD+ VD+GGATTD+YS+ + + + + RTVEGDLG+R+S
Sbjct: 242 G-----GDLAVVDVGGATTDVYSVLTPDERESGPGREVAGSLWRARTVEGDLGVRWSAPG 296
Query: 264 MADEMNMEVFADELGIEQSKIEDWIKRCVAAPATLPQTDEEARIEQGLARNAVKVAVERH 323
+ E D E +R PA LP E + LA A VA+ RH
Sbjct: 297 VVRAAVEERLLDAAEAEVLAAA--ARRRADDPAYLPAGGAERATDARLAALAATVALRRH 354
Query: 324 CGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKNN--TDPEQILSGA-EKKASRDPM 380
G+ G+DL +V +VG GG +++ D +L+G A P+
Sbjct: 355 A-----RGAATGE---RAGRDLRDVRLLVGSGGVLRHAAPADAAGVLAGVLADYAGGWPL 406
Query: 381 FAKPKAPKYMLDKKYIFASMGLLSTFEP 408
P+A + ++D +Y+ A+ GLL +P
Sbjct: 407 ---PRAARPVVDVEYVLAAAGLLGAEQP 431
>gi|149177279|ref|ZP_01855884.1| Methylaspartate mutase [Planctomyces maris DSM 8797]
gi|148843804|gb|EDL58162.1| Methylaspartate mutase [Planctomyces maris DSM 8797]
Length = 612
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 113/423 (26%), Positives = 193/423 (45%), Gaps = 44/423 (10%)
Query: 16 GHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVK---TYSFEISQAE 72
G D + SSA GGL+M+ G+V E++A +AK AA AGA V+ + + +
Sbjct: 90 GDTGCDIYISTSSAGGGLQMMVAGVVREMSAASAKRAALGAGAIVMDMICSNDKRLPHEQ 149
Query: 73 QQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTID--------RDFSIIAAGNKTASY 124
Q I ++ PD++LL GGTDGG + ++ A+ + II AGN A+
Sbjct: 150 IQRIRELRPDMILLAGGTDGGTQKHVVELAELIAPAKPQPRFGGTYKMPIIYAGNHEAAQ 209
Query: 125 ELDEIFKASNKKKCVITENVMPQFNVININPAKQKIKELFISRII-EAKGLSRIQEMSGY 183
+++ F K + NV P N+ PA+ I +LF+ ++ A G +++ +
Sbjct: 210 LVEDAF--DEDVKLMTVANVRPVLEQENLAPARDAIHDLFLEHVMAHAPGYNKLISWADA 267
Query: 184 DIIPTPLAVLTGCELFSKGYGRDEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLP 243
I+PTP AV + + ++ + + VD+GGATTD++S+ G
Sbjct: 268 PIMPTPGAVGNILQTIA-----EQQNINALGVDIGGATTDVFSVFDGT------------ 310
Query: 244 EPYSKRTVEGDLGMRYSLTAMADEMNMEVFAD--ELGIEQSKIEDWIKRCVAAPATLPQT 301
RTV +LGM YS++ + + + L ++ ++ + IK + P T+PQT
Sbjct: 311 ---FNRTVSANLGMSYSISNVCASATLPMILRWVHLEMDPRELRNHIKNKMIRPTTIPQT 367
Query: 302 DEEARIEQGLARNAVKVAVERHCGYFEPAFTPMGQVFTLTGKDLSEVPYIVGIGGSIKNN 361
E EQ +AR A+++A +H F + Q T+ G S+ I ++K N
Sbjct: 368 REALVFEQAVAREALRLAYIQH-KEFATTLKGVQQQRTV-GDTFSQNSSGASIVDNMKLN 425
Query: 362 --TDPEQILSGAEKKASRDPMFAKPKAPKYML----DKKYIFASMGLLSTFEPHLALAIM 415
+LS A M P+ M D ++ +G+L+ P AL +
Sbjct: 426 LLVASGGVLSHAPNMNQTAAMMIDAFEPEGMTVLAKDSIFMMPHLGVLAQVHPRAALQVF 485
Query: 416 KKE 418
+++
Sbjct: 486 ERD 488
>gi|114845385|ref|ZP_01455792.1| methylaspartate mutase [Thermoanaerobacter ethanolicus X514]
gi|114804599|gb|EAU56433.1| methylaspartate mutase [Thermoanaerobacter ethanolicus X514]
Length = 170
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/117 (39%), Positives = 73/117 (62%)
Query: 3 GFNNGMQQLEAQIGHFAYDRLLCCSSAAGGLKMVALGLVPELTAKAAKMAASSAGAKVVK 62
G ++ L+ +IG F Y +L CSSAAGGLKM GLV ++T +AAK AA AGA +
Sbjct: 48 GLEGAIEDLKDKIGDFVYSEMLACSSAAGGLKMTVHGLVYDMTVRAAKEAALGAGANIKL 107
Query: 63 TYSFEISQAEQQEIYDINPDLVLLCGGTDGGNKDVILANAKRLCTIDRDFSIIAAGN 119
+ ++ + + ++I I P+++LL GG D G+++ L NA++L + + +I AGN
Sbjct: 108 ITAGKLRRTDLEKIKQIKPNIILLAGGVDFGDRETALYNAEKLAEMKLNVPVIYAGN 164
>gi|82523796|emb|CAI78539.1| hypothetical protein [uncultured Chloroflexi bacterium]
Length = 589
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 78/347 (22%), Positives = 153/347 (44%), Gaps = 42/347 (12%)
Query: 25 CCSSAAGGL--KMVALGLVPELTAKAAKMAASSAGAKVVKTYSF---EISQAEQQEIYDI 79
C ++ + GL ++VA+GL+ ++A++A+ A++ A+V++T S ++ + +
Sbjct: 96 CVATLSVGLPIRVVAIGLLEHISAESARNLATTTYAEVLETLSLNDKRLTATRLDTLLSL 155
Query: 80 NPDLVLLCGGTDGGNKDVI---LANAKRLCTI---DRDFSIIAAGNKTASYELDEIFKAS 133
PDLV++ GG +GG + + L C + ++ ++ AGN ++++ E
Sbjct: 156 RPDLVVIAGGAEGGASESVINLLEAVGLACYVLPKEQRPEVLYAGNSALAHQVKETL--G 213
Query: 134 NKKKCVITENVMPQFNVININPAKQKIKELFIS-RIIEAKGLSRIQEMSGYDIIPTPLAV 192
I NV P ++ + P++ + ++F R + +G++ I + + PT A
Sbjct: 214 GLASLHIAPNVRPSLDIEQLTPSQPVLSQVFRQVRARQMRGVAEIDHWASNHLTPTAAAF 273
Query: 193 LTGCELFSKGYGR-DEGVGDMMAVDLGGATTDIYSMAKGEPTIAEVITKGLPEPYSKRTV 251
SK Y ++GV + +D+G ++T I + G+ + ++
Sbjct: 274 GRTIRFISKEYAHTNKGV---LGIDVGASSTTIAAGYAGDLIL---------------SI 315
Query: 252 EGDLGMRYSLTAMADEMNMEVFADELGIE--QSKIEDWIKRCVAAPATLPQTDEEARIEQ 309
LG+ +L M +E L +E ++ D+I A P TLP E IEQ
Sbjct: 316 YTQLGLGQNLPQMLQLCEIEDIQRWLSVEIPNDELLDYIHNKSAFPGTLPAGPTELAIEQ 375
Query: 310 GLARNAVKVAVERHCGYFEPA-------FTPMGQVFTLTGKDLSEVP 349
LA A +A+ + + P F P + TG+ + P
Sbjct: 376 ALACQAATLAIRQAMQAYPPQLPRPFPDFLPSFEPIIATGRSFTRAP 422
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.317 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,524,039,346
Number of Sequences: 5470121
Number of extensions: 64268153
Number of successful extensions: 157640
Number of sequences better than 1.0e-05: 45
Number of HSP's better than 0.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 157442
Number of HSP's gapped (non-prelim): 45
length of query: 422
length of database: 1,894,087,724
effective HSP length: 135
effective length of query: 287
effective length of database: 1,155,621,389
effective search space: 331663338643
effective search space used: 331663338643
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 131 (55.1 bits)