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Post Number: 1
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david_user
Group: Guests
Posts: 471
Joined: Mar. 2006
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Posted on: Jul. 21 2008,11:20 |
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Hi there, I'm trying to import a list of zebrafish Ensembl gene IDs into DAVID, but without success. Does DAVID currently support only human Ensembl genes?
In Ensembl I can convert my list to EntrezGeneIDs, Genbank IDs, Unigene IDs, etc. What would be the best format to use in DAVID?
Thanks, fhm
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Post Number: 2
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david
Group: Super Administrators
Posts: 698
Joined: Mar. 2006
Member Rating: None
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Posted on: Jul. 21 2008,11:27 |
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The current Ensembl coverage is minimal. We are working on an update to increase this coverage. In the meantime, it would be best to use Entrez Gene for uploading into DAVID. Below are the species currently covered for Ensembl in DAVID:
AEDES AEGYPTI ANOPHELES GAMBIAE APIS MELLIFERA BOS TAURUS CAENORHABDITIS BRIGGSAE CAENORHABDITIS ELEGANS CANIS FAMILIARIS CAVIA PORCELLUS CIONA INTESTINALIS CIONA SAVIGNYI DASYPUS NOVEMCINCTUS DROSOPHILA MELANOGASTER ECHINOPS TELFAIRI ERINACEUS EUROPAEUS GALLUS GALLUS GASTEROSTEUS ACULEATUS HOMO SAPIENS LOXODONTA AFRICANA MACACA MULATTA MONODELPHIS DOMESTICA MUS MUSCULUS MYOTIS LUCIFUGUS ORNITHORHYNCHUS ANATINUS ORYCTOLAGUS CUNICULUS ORYZIAS LATIPES OTOLEMUR GARNETTII PAN TROGLODYTES RATTUS NORVEGICUS SACCHAROMYCES CEREVISIAE SOREX ARANEUS SPERMOPHILUS TRIDECEMLINEATUS TAKIFUGU RUBRIPES TETRAODON NIGROVIRIDIS XENOPUS TROPICALIS
DAVID Team
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