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Anopheles gambiae: UniGene Build #41

Lineage: cellular organisms; Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Coelomata; Protostomia; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicimorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Pyretophorus; gambiae species complex; Anopheles gambiae

Sequences Included in UniGene
Known genes are from GenBank 18 Jul 2008
ESTs are from dbEST through 18 Jul 2008

1,102 mRNAs
218 Models
58,817 HTC
7 EST, 3'reads
66,387 EST, 5'reads
43,051 EST, other/unknown

169,582 total sequences in clusters

Build Method: Genome Based

Alignments between transcript sequences and genomic sequences are used to generate clusters of sequences originating from the same gene.
More...


Final Number of Clusters (sets)

21,387 sets total
577 sets contain at least one mRNA
6,265 sets contain at least one HTC sequence
19,020 sets contain at least one EST
381 sets contain both mRNAs and ESTs



Histogram of cluster sizes for UniGene Aga build 41
2049-4096 2
1025-2048 9
513-1024 14
257-512 29
129-256 105
65-128 199
33-64 373
17-32 855
9-16 1568
5-8 2166
3-4 2800
2 3276
1 9991




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