DEnse Body family member (deb-1) (deb-1) (deb-1)

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Finding cDNAs

UGID:59242 UniGene Cel.17854 Caenorhabditis elegans (nematode) deb-1

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DEnse Body family member (deb-1) (deb-1) (deb-1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_501104.2	DEnse Body family member (deb-1)	C. elegans	100.0	1009
NP_476820.1	Vinculin CG3299-PA	D. melanogaster	56.7	960
XP_001919971.1	PREDICTED: similar to vinculin, partial	D. rerio	49.7	608
NP_003364.1	vinculin isoform VCL	H. sapiens	47.1	1064
NP_033528.3	vinculin	M. musculus	46.9	1064

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; L1 larva; embryo; L4 larva; unknown developmental stage

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_068703.4	Caenorhabditis elegans DEnse Body family member (deb-1) (deb-1) mRNA, complete cds	P
NM_068704.4	Caenorhabditis elegans DEnse Body family member (deb-1) (deb-1) mRNA, complete cds	PA
NM_171374.3	Caenorhabditis elegans DEnse Body family member (deb-1) (deb-1) mRNA, complete cds	PA

EST sequences (10 of 68) [Show all sequences]

CB385369.1		mixed		P
CB404376.1		mixed		P
CK586111.1		mixed	5' read	P
BJ800837.1	Clone yk1442c10	L4 larva	5' read	P
BJ803007.1	Clone yk1467h09	L4 larva	5' read	P
BJ803176.1	Clone yk1470a07	L4 larva	5' read	P
BJ803334.1	Clone yk1472a06	L4 larva	5' read	P
BJ810250.1	Clone yk1442c10	L4 larva	3' read	P
BJ812454.1	Clone yk1467h09	L4 larva	3' read	P
BJ812639.1	Clone yk1470a07	L4 larva	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria