Zgc:55573 (zgc:55573)

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Finding cDNAs

UGID:100959 UniGene Dr.206 Danio rerio (zebrafish) zgc:55573

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Zgc:55573 (zgc:55573)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_998620.1	hypothetical protein LOC406764	D. rerio	100.0	621
NP_038764.2	transcription elongation factor B (SIII), polypeptide 3	M. musculus	54.4	770

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	muscle; whole body; kidney; reproductive system; eye; heart; mixed; brain; fin; olfactory rosettes

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	Un\|125856233
UniSTS entry:	Chr 19	fa07b06.s1	[Map Viewer]
UniSTS entry:	Chr 19	fc15a12.x1	[Map Viewer]

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC044429.1	Danio rerio zgc:55573, mRNA (cDNA clone MGC:55573 IMAGE:2643182), complete cds	PA
	NM_213455.1	Danio rerio zgc:55573 (zgc:55573), mRNA	PA

EST sequences (10 of 94) [Show all sequences]

AA542453.1	Clone 5H10	whole body	3' read	A
AA542492.1	Clone 5H10	whole body	5' read	P
AA606051.1	Clone 1036845	whole body	3' read	A
AI657559.1	Clone IMAGE:3721438	mixed	5' read	P
AW018832.1	Clone IMAGE:3734149	mixed	5' read	P
AW343019.1	Clone IMAGE:2643182	whole body	5' read	P
AW344002.1	Clone IMAGE:2643182	whole body	3' read	P
AI641439.1	Clone IMAGE:3721438	mixed	3' read	A
BE557447.1		fin	5' read	P
BF937160.1	Clone IMAGE:4199910	eye	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria