R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 54 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|2467088|emb|CAA05084.1| (AJ001911) putative Ckc2 [Arabidopsis thaliana]
Length = 246
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | 246
0 50 100 150 200
Plus Strand HSPs:
Score = 197 (69.3 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 50/107 (46%), Positives = 64/107 (59%), Frame = +1
Query: 67 MCGGAIISDF---IGVKRGRNLXAXELWSELDPFS--DLLGFDTTTTT--TNQPPLPDKK 225
MCGGAIISD+ + +GR L A ELWSELD + D GF +T+ TNQ + +++
Sbjct: 1 MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQVNVKEEE 60
Query: 226 VVSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
V KK+++ K R N Y GI PWG WA EI DP GVR+WL
Sbjct: 61 AV-----KKEQATEPGKRR---KRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWL 106
>gi|2281631|gb|AAC49769.1| (AF003096) AP2 domain containing protein RAP2.3
[Arabidopsis thaliana] >gi|11994632|dbj|BAB02769.1| (AB022217) AP2
domain transcription factor RAP2.3 [Arabidopsis thaliana]
Length = 248
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | | 248
0 50 100 150 200
Plus Strand HSPs:
Score = 193 (67.9 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 50/107 (46%), Positives = 63/107 (58%), Frame = +1
Query: 67 MCGGAIISDF---IGVKRGRNLXAXELWSELDPFS--DLLGFDTTTTT--TNQPPLPDKK 225
MCGGAIISD+ + +GR L A ELWSELD + D GF +T+ TNQ + ++
Sbjct: 1 MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQVNVKEEA 60
Query: 226 VVSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
V KK+++ K R N Y GI PWG WA EI DP GVR+WL
Sbjct: 61 V------KKEQATEPGKRR---KRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWL 105
>gi|7487565|pir||T00432 hypothetical protein T30B22.18 - Arabidopsis thaliana
>gi|2529675|gb|AAC62858.1| (AC002535) putative AP2 domain
transcription factor [Arabidopsis thaliana]
Length = 171
Frame 1 hits (HSPs): ____ _______________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 132 (46.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 28/53 (52%), Positives = 33/53 (62%), Frame = +1
Query: 229 VSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
VSS +K+K SVS ++ G R N Y GI PWG WA EI DP GVR+WL
Sbjct: 25 VSSRKKRKPVSVSEER-DGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWL 76
Score = 59 (20.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 12/14 (85%), Positives = 12/14 (85%), Frame = +1
Query: 67 MCGGAIISDFIGVK 108
MCGGAIISDFI K
Sbjct: 1 MCGGAIISDFIWSK 14
>gi|7489226|pir||T07784 AP2 domain protein homolog - potato
>gi|1688233|gb|AAC29516.1| (U77655) DNA binding protein homolog
[Solanum tuberosum]
Length = 298
Frame 1 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | | | 298
0 50 100 150 200 250
Plus Strand HSPs:
Score = 167 (58.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 41/107 (38%), Positives = 50/107 (46%), Frame = +1
Query: 67 MCGGAIISDFIGVKRGRNLXAXELWSELDPFSDLLGFDTTTTTTNQPPLPDKKVVSSCEK 246
MCGGAI+ D I R R L + +LW F F +T N PP P + +S +
Sbjct: 1 MCGGAILYDII--PRDRRLSSTDLWPSSADFWQTSSFSKPISTQNVPPKPKRAQLSRGSE 58
Query: 247 KKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
+ KK R N Y GI PWG WA EI DP VR+WL
Sbjct: 59 QMKKR----------QRKNLYRGIRQRPWGKWAAEIRDPRKRVRVWL 95
>gi|10798644|emb|CAC12822.1| (AJ299252) AP2 domain-containing transcription
factor [Nicotiana tabacum]
Length = 226
Frame 1 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
Plus Strand HSPs:
Score = 138 (48.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 35/89 (39%), Positives = 44/89 (49%), Frame = +1
Query: 133 ELWSELDPFSDLLG-FDTTTTTT---NQPPLPDKKVVSSCEKKKKKSVSAQKXSGG-XXR 297
+ WS S + G D+ + T N+P D ++ EK SV +K S G R
Sbjct: 3 DFWSSSSSSSSIAGKSDSVQSLTHSYNKPQKSDSGKLNQLEKGTI-SVKVEKESSGPRAR 61
Query: 298 NNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
N Y GI PWG WA EI DP GVR+WL
Sbjct: 62 KNKYRGIRQRPWGKWAAEIRDPQKGVRVWL 91
>gi|6176534|gb|AAF05606.1|AF190770_1 (AF190770) EREBP-like protein [Oryza
sativa]
Length = 362
Frame 1 hits (HSPs): ____ _____
__________________________________________________
Database sequence: | | | | 362
0 150 300
Plus Strand HSPs:
Score = 102 (35.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 18/31 (58%), Positives = 20/31 (64%), Frame = +1
Query: 295 RNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
R N + GI PWG WA EI DP GVR+WL
Sbjct: 111 RKNQFRGIRQRPWGKWAAEIRDPRKGVRVWL 141
Score = 63 (22.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 14/27 (51%), Positives = 17/27 (62%), Frame = +1
Query: 67 MCGGAIISDFIGVKRGRNLXAXELWSE 147
MCGGAI+SD I R + A +LW E
Sbjct: 1 MCGGAILSDLIPPPR--RVTAGDLWLE 25
>gi|1168862|sp|P42736|CDI3_ARATH CADMIUM-INDUCED PROTEIN AS30
>gi|629508|pir||S49031 cadmium-induced protein - Arabidopsis
thaliana >gi|541773|emb|CAA85734.1| (Z37504) cadmium-induced
protein [Arabidopsis thaliana]
Length = 204
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | 204
0 50 100 150 200
Plus Strand HSPs:
Score = 137 (48.2 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 35/89 (39%), Positives = 43/89 (48%), Frame = +1
Query: 121 LXAXELWSELDPFSDLLGFDTTTTTTNQPPLPDKKVVSSCEKKKKKSVSAQKXSGGXXRN 300
L A ELWSELD S F +T+ P V KK++ + ++ R
Sbjct: 12 LTAEELWSELDA-SAADDFWGNYSTSKLHPTNQVNVKEEAVKKEQATEPGKRRK----RK 66
Query: 301 NXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
N Y GI PWG WA EI DP GVR+WL
Sbjct: 67 NVYRGIRKRPWGKWAAEIRDPRKGVRVWL 95
>gi|12325282|gb|AAG52589.1|AC016529_20 (AC016529) putative AP2 domain
transcription factor; 71325-70452 [Arabidopsis thaliana]
Length = 262
Frame 1 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | | 262
0 50 100 150 200 250
Plus Strand HSPs:
Score = 140 (49.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 38/107 (35%), Positives = 48/107 (44%), Frame = +1
Query: 67 MCGGAIISDFIGVKRGRNLXAXELWSELDPFS-DLLGFDTTTTTTNQPPLPDKKVVSSCE 243
MCGGA+ISD+I ++ W F + FD D+ V S
Sbjct: 1 MCGGAVISDYIAPEKIARSSGKSSWRSNGVFDCSIYDFDGNFDELES----DEPFVFSST 56
Query: 244 KKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
K S SA G +++ Y GI PWG WA EI DP GVR+WL
Sbjct: 57 HKHHASGSAS--DGKKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWL 102
>gi|6689918|gb|AAF23899.1|AF193803_1 (AF193803) transcription factor EREBP1
[Oryza sativa]
Length = 365
Frame 1 hits (HSPs): ____ _____
__________________________________________________
Database sequence: | | | | 365
0 150 300
Plus Strand HSPs:
Score = 101 (35.6 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 18/31 (58%), Positives = 20/31 (64%), Frame = +1
Query: 295 RNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
R N + GI PWG WA EI DP GVR+WL
Sbjct: 116 RKNQFRGIRHRPWGKWAAEIRDPRKGVRVWL 146
Score = 50 (17.6 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 13/28 (46%), Positives = 13/28 (46%), Frame = +1
Query: 67 MCGGAIISDFIGVKRG-RNLXAXELWSE 147
MCGGAII G G R LW E
Sbjct: 1 MCGGAIIHHLKGHPEGSRRATEGLLWPE 28
>gi|2281649|gb|AAC49778.1| (AF003105) AP2 domain containing protein RAP2.12
[Arabidopsis thaliana]
Length = 317
Frame 1 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | | | | 317
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 33/100 (33%), Positives = 45/100 (45%), Frame = +1
Query: 88 SDFIGVKRGRNLXAXELWSELDPFSDLLGFDTTTTTTNQPPLPDKKVVSSCEKKKKKSVS 267
+DF G K ++ + + D F+D+ F T+T +P + S KK
Sbjct: 13 ADFQGFKDDSSIDCDDDFDVGDVFADVKPF--VFTSTPKPAVSAAAEGSVFGKKVTGLDG 70
Query: 268 AQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
+ S R N Y GI PWG WA EI DP G R+WL
Sbjct: 71 DAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWL 110
>gi|6056399|gb|AAF02863.1|AC009324_12 (AC009324) AP2 domain containing protein
RAP2.12 [Arabidopsis thaliana]
Length = 358
Frame 1 hits (HSPs): ____ ______________
__________________________________________________
Database sequence: | | | | 358
0 150 300
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 33/100 (33%), Positives = 45/100 (45%), Frame = +1
Query: 88 SDFIGVKRGRNLXAXELWSELDPFSDLLGFDTTTTTTNQPPLPDKKVVSSCEKKKKKSVS 267
+DF G K ++ + + D F+D+ F T+T +P + S KK
Sbjct: 54 ADFQGFKDDSSIDCDDDFDVGDVFADVKPF--VFTSTPKPAVSAAAEGSVFGKKVTGLDG 111
Query: 268 AQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
+ S R N Y GI PWG WA EI DP G R+WL
Sbjct: 112 DAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWL 151
Score = 79 (27.8 bits), Expect = 2.6, P = 0.93
Identities = 15/28 (53%), Positives = 19/28 (67%), Frame = +1
Query: 67 MCGGAIISDFIGVKRGRNLXAXELWSEL 150
MCGGAIISDFI R R + + +W +L
Sbjct: 1 MCGGAIISDFIPPPRSRRVTSEFIWPDL 28
>gi|9279571|dbj|BAB01029.1| (AB022220) transcription factor EREBP-like protein
[Arabidopsis thaliana]
Length = 375
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 375
0 150 300
Plus Strand HSPs:
Score = 118 (41.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/100 (35%), Positives = 43/100 (43%), Frame = +1
Query: 88 SDFIGVKRGRNLXAXELWSELDPFSDLLGFDTTTTTTNQPPLPDKKVVSSCEKKKKKSVS 267
+DF G K A + + D F ++ F T TT V S+ KK +S
Sbjct: 54 ADFQGFKDD---SAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTVGSAYAKKTVESAE 110
Query: 268 AQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
+ S R N Y GI PWG WA EI DP G R WL
Sbjct: 111 QAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWL 150
>gi|3264767|gb|AAC24587.1| (AF071893) AP2 domain containing protein [Prunus
armeniaca]
Length = 280
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | 280
0 50 100 150 200 250
Plus Strand HSPs:
Score = 106 (37.3 bits), Expect = 0.00018, P = 0.00018
Identities = 19/31 (61%), Positives = 20/31 (64%), Frame = +1
Query: 295 RNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
R N Y GI PWG WA EI DP GVR+WL
Sbjct: 8 RKNQYRGIRQRPWGKWAAEIRDPRKGVRVWL 38
>gi|7485319|pir||T04787 hypothetical protein F10M10.180 - Arabidopsis thaliana
>gi|4455186|emb|CAB36718.1| (AL035521) putative protein
[Arabidopsis thaliana] >gi|7270391|emb|CAB80158.1| (AL161585)
putative protein [Arabidopsis thaliana]
Length = 268
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
Plus Strand HSPs:
Score = 103 (36.3 bits), Expect = 0.00035, P = 0.00035
Identities = 21/63 (33%), Positives = 34/63 (53%), Frame = +1
Query: 217 DKKVVSSCEKKKKKSVSAQKXSGGXX------RNNXYXGIXPWPWG*WAPEIXDPHXGVR 378
++++ SS ++++ S A+K GG + N Y G+ PWG +A EI DP R
Sbjct: 100 EEEITSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATR 159
Query: 379 LWL 387
+WL
Sbjct: 160 VWL 162
>gi|1707016|gb|AAC69127.1| (U78721) putative AP2 domain transcription factor
[Arabidopsis thaliana]
Length = 218
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | 218
0 50 100 150 200
Plus Strand HSPs:
Score = 101 (35.6 bits), Expect = 0.00036, P = 0.00036
Identities = 22/59 (37%), Positives = 32/59 (54%), Frame = +1
Query: 211 LPDKKVVSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
L + + SS + + S++ Q+ S RN Y G+ PWG WA EI DP+ R+WL
Sbjct: 41 LTGQPIPSSIDDQSS-SLTLQEKSNSRQRN--YRGVRQRPWGKWAAEIRDPNKAARVWL 96
>gi|2281637|gb|AAC49772.1| (AF003099) AP2 domain containing protein RAP2.6
[Arabidopsis thaliana]
Length = 164
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | 164
0 50 100 150
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.00067, P = 0.00067
Identities = 16/31 (51%), Positives = 18/31 (58%), Frame = +1
Query: 295 RNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
R Y G+ PWG WA EI DPH R+WL
Sbjct: 29 RPKKYRGVRQRPWGKWAAEIRDPHKATRVWL 59
>gi|3617742|gb|AAC36019.1| (AC005687) RAP2.6 [Arabidopsis thaliana]
Length = 192
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | 192
0 50 100 150
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.0012, P = 0.0012
Identities = 16/31 (51%), Positives = 18/31 (58%), Frame = +1
Query: 295 RNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
R Y G+ PWG WA EI DPH R+WL
Sbjct: 57 RPKKYRGVRQRPWGKWAAEIRDPHKATRVWL 87
>gi|7489208|pir||T01986 Tsi1 protein - common tobacco
>gi|3065895|gb|AAC14323.1| (AF058827) TSI1 [Nicotiana tabacum]
Length = 251
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | || 251
0 50 100 150 200 250
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.0018, P = 0.0018
Identities = 22/59 (37%), Positives = 30/59 (50%), Frame = +1
Query: 211 LPDKKVVSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
+P ++ CEKK++ VS R + G+ PWG WA EI DP G R+WL
Sbjct: 81 MPSPNLI--CEKKRRL-VSPDTD---VTRRKKFRGVRQRPWGRWAAEIRDPTRGKRVWL 133
>gi|10177219|dbj|BAB10294.1| (AB026650) contains similarity to AP2 domain
transcription factor~gene_id:MPF21.9 [Arabidopsis thaliana]
Length = 220
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 220
0 50 100 150 200
Plus Strand HSPs:
Score = 94 (33.1 bits), Expect = 0.0022, P = 0.0022
Identities = 15/31 (48%), Positives = 18/31 (58%), Frame = +1
Query: 295 RNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
+ Y G+ PWG WA EI DPH R+WL
Sbjct: 73 KKRRYRGVRQRPWGKWAAEIRDPHRAARVWL 103
>gi|7531181|sp|O04682|PTI6_LYCES PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL
ACTIVATOR PTI6 >gi|7489079|pir||T07728 transcription factor Pti6 -
tomato >gi|2213785|gb|AAC49741.1| (U89257) Pti6 [Lycopersicon
esculentum]
Length = 248
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 248
0 50 100 150 200
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.0023, P = 0.0023
Identities = 21/59 (35%), Positives = 29/59 (49%), Frame = +1
Query: 211 LPDKKVVSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
+P K + +K++SVS R + G+ PWG WA EI DP G R+WL
Sbjct: 72 MPSTKSIGD---RKRRSVSPDSD---VTRRKKFRGVRQRPWGRWAAEIRDPTRGKRVWL 124
>gi|8980313|emb|CAB96899.1| (AJ251249) AP2-domain DNA-binding protein
[Catharanthus roseus] >gi|8980315|emb|CAB96900.1| (AJ251250)
AP2-domain DNA-binding protein [Catharanthus roseus]
Length = 203
Frame 1 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | || 203
0 50 100 150 200
Plus Strand HSPs:
Score = 93 (32.7 bits), Expect = 0.0024, P = 0.0024
Identities = 26/90 (28%), Positives = 39/90 (43%), Frame = +1
Query: 133 ELWSELDPFSDLLGFDTTTTTTNQPPLPDK----KVVSSCEKKKKKSVSAQKXSGGXXRN 300
E W E+ F+D L + + P + + SC++ + +GG
Sbjct: 38 ENWEEI--FADFLNWSGSEIQKRGSPSSESCQSNSMAESCQEDSVVGTPPEAAAGGGCSK 95
Query: 301 --NXYXGIXPWPWG*WAPEIXDPHX-GVRLWL 387
N Y G+ PWG +A EI DP G R+WL
Sbjct: 96 DWNRYKGVRRRPWGKFAAEIRDPKKKGSRIWL 127
>gi|7484952|pir||T00409 ethylene-responsive transcription factor homolog
T13E15.15 - Arabidopsis thaliana >gi|2344900|gb|AAC31840.1|
(AC002388) putative ethylene response element-binding protein
(EREBP) [Arabidopsis thaliana]
Length = 226
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
Plus Strand HSPs:
Score = 94 (33.1 bits), Expect = 0.0024, P = 0.0024
Identities = 27/96 (28%), Positives = 40/96 (41%), Frame = +1
Query: 118 NLXAXELWSEL----DPFSDLLGFDTTTTTTNQPPLPD-KKVVSSCEKKKKKSVSAQKXS 282
N+ + WS+L D D+ ++T + P V S E+ K + A
Sbjct: 24 NVILNDNWSDLPLSVDDSQDMAIYNTLRDAVSSGWTPSVPPVTSPAEENKPPATKASGSH 83
Query: 283 GGXXRNNXYXGIXPWPWG*WAPEIXDPHX-GVRLWL 387
+ Y G+ PWG +A EI DP G R+WL
Sbjct: 84 APRQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWL 119
>gi|3702318|gb|AAC62875.1| (AC005397) putative AP2 domain transcription factor
[Arabidopsis thaliana]
Length = 294
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | | 294
0 50 100 150 200 250
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.0024, P = 0.0024
Identities = 22/50 (44%), Positives = 27/50 (54%), Frame = +1
Query: 244 KKKKKSVSAQKXSGGXXRNNX--YXGIXPWPWG*WAPEIXDPHXGVRLWL 387
K KKKS +A +GG + Y G+ PWG +A EI DP RLWL
Sbjct: 76 KAKKKSPAAAAENGGDLVKSVVKYRGVRQRPWGKFAAEIRDPSSRTRLWL 125
>gi|7486964|pir||T02896 hypothetical protein T13J8.60 - Arabidopsis thaliana
>gi|4455354|emb|CAB36764.1| (AL035524) putative protein
[Arabidopsis thaliana] >gi|7269649|emb|CAB79597.1| (AL161572)
putative protein [Arabidopsis thaliana]
Length = 334
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 334
0 150 300
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.0039, P = 0.0039
Identities = 23/69 (33%), Positives = 32/69 (46%), Frame = +1
Query: 181 TTTTTTNQPPLPDKKVVSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXD 360
++T + P D+K ++ +K SVS Q Y G+ PWG WA EI D
Sbjct: 82 SSTGDVSASPTKDRKRINVDSTVQKPSVSGQN-------QKKYRGVRQRPWGKWAAEIRD 134
Query: 361 PHXGVRLWL 387
P R+WL
Sbjct: 135 PEQRRRIWL 143
>gi|11358680|pir||T49870 probable transcription factor - Arabidopsis thaliana
>gi|7576169|emb|CAB87920.1| (AL163912) putative transcription
factor [Arabidopsis thaliana]
Length = 263
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | 263
0 50 100 150 200 250
Plus Strand HSPs:
Score = 93 (32.7 bits), Expect = 0.0042, P = 0.0042
Identities = 16/34 (47%), Positives = 18/34 (52%), Frame = +1
Query: 286 GXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
G R Y G+ PWG WA EI DP R+WL
Sbjct: 85 GLLRKRHYRGVRQRPWGKWAAEIRDPQKAARVWL 118
>gi|9758388|dbj|BAB08875.1| (AB022212) AP2 domain transcription factor-like
[Arabidopsis thaliana]
Length = 248
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 248
0 50 100 150 200
Plus Strand HSPs:
Score = 92 (32.4 bits), Expect = 0.0049, P = 0.0049
Identities = 16/34 (47%), Positives = 18/34 (52%), Frame = +1
Query: 286 GXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
G R Y G+ PWG WA EI DP R+WL
Sbjct: 83 GDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWL 116
>gi|6478845|dbj|BAA87068.1| (AB035270) ethylene-responsive element binding
protein1 homolog [Matricaria chamomilla]
Length = 158
Frame 1 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | 158
0 50 100 150
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.0054, P = 0.0053
Identities = 19/49 (38%), Positives = 26/49 (53%), Frame = +1
Query: 244 KKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDP-HXGVRLWL 387
K + ++ S Q S G + Y G+ PWG +A EI DP G R+WL
Sbjct: 17 KSEPETSSFQPKSLGSQKGKHYRGVRRRPWGKYAAEIRDPAKNGARVWL 65
>gi|9665142|gb|AAF97326.1|AC023628_7 (AC023628) Similar to transcription factor
TINY [Arabidopsis thaliana]
Length = 187
Frame 1 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | 187
0 50 100 150
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.0092, P = 0.0092
Identities = 16/63 (25%), Positives = 28/63 (44%), Frame = +1
Query: 199 NQPPLPDKKVVSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVR 378
+ PP+ + + ++ K ++ S R+ Y G+ WG W EI +P R
Sbjct: 4 SSPPVTNNEPTATASAVKSCGGGGKETSSSTTRHPVYHGVRKRRWGKWVSEIREPRKKSR 63
Query: 379 LWL 387
+WL
Sbjct: 64 IWL 66
>gi|2062174|gb|AAB63648.1| (AC001645) transcription factor (TINY) isolog
[Arabidopsis thaliana]
Length = 236
Frame 1 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | 236
0 50 100 150 200
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 0.0095, P = 0.0094
Identities = 22/69 (31%), Positives = 35/69 (50%), Frame = +1
Query: 181 TTTTTTN--QPPLPDKKVVSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEI 354
TTTT+T+ + P + ++ K+++ S SA S ++ Y G+ WG W EI
Sbjct: 21 TTTTSTHLSEEEAPPRN--NNTRKRRRDSSSASSSSS--MQHPVYRGVRMRSWGKWVSEI 76
Query: 355 XDPHXGVRLWL 387
P R+WL
Sbjct: 77 RQPRKKTRIWL 87
>gi|11358305|pir||T48580 hypothetical protein T31B5.150 - Arabidopsis thaliana
>gi|7529288|emb|CAB86640.1| (AL163491) putative protein
[Arabidopsis thaliana]
Length = 212
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 212
0 50 100 150 200
Plus Strand HSPs:
Score = 88 (31.0 bits), Expect = 0.0097, P = 0.0096
Identities = 15/31 (48%), Positives = 17/31 (54%), Frame = +1
Query: 295 RNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
R Y G+ PWG WA EI DP R+WL
Sbjct: 35 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWL 65
>gi|9279711|dbj|BAB01268.1| (AB023046) transcription factor TINY-like protein
[Arabidopsis thaliana]
Length = 254
Frame 1 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | || 254
0 50 100 150 200 250
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 0.011, P = 0.011
Identities = 22/69 (31%), Positives = 35/69 (50%), Frame = +1
Query: 181 TTTTTTN--QPPLPDKKVVSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEI 354
TTTT+T+ + P + ++ K+++ S SA S ++ Y G+ WG W EI
Sbjct: 39 TTTTSTHLSEEEAPPRN--NNTRKRRRDSSSASSSSS--MQHPVYRGVRMRSWGKWVSEI 94
Query: 355 XDPHXGVRLWL 387
P R+WL
Sbjct: 95 RQPRKKTRIWL 105
>gi|9758474|dbj|BAB09003.1| (AB012239) transcription factor-like protein
[Arabidopsis thaliana]
Length = 201
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | || 201
0 50 100 150 200
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.011, P = 0.011
Identities = 24/82 (29%), Positives = 37/82 (45%), Frame = +1
Query: 145 ELDPFSDLLGFDTTTTTTNQPPLPDKKVVSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXP 324
+L+P S +L D+ Q S+ + ++VS +K + Y G+
Sbjct: 53 KLEPSSPVLDPDSYVQEILQMEAESSSSSSTTTSPEVETVSNRKKTKRFEETRHYRGVRR 112
Query: 325 WPWG*WAPEIXDP-HXGVRLWL 387
PWG +A EI DP G R+WL
Sbjct: 113 RPWGKFAAEIRDPAKKGSRIWL 134
>gi|9369375|gb|AAF87124.1|AC006434_20 (AC006434) F10A5.29 [Arabidopsis
thaliana]
Length = 206
Frame 1 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | | 206
0 50 100 150 200
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.012, P = 0.012
Identities = 22/64 (34%), Positives = 30/64 (46%), Frame = +1
Query: 217 DKKVVSSCEKKKKKSVSAQKXSG-----GXXRNNX--YXGIXPWPWG*WAPEIXDPHXGV 375
+ KV+ KK+++V A G G N Y G+ WG W EI +P+ G
Sbjct: 5 EPKVMMVGANKKQRTVQASSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGA 64
Query: 376 RLWL 387
RLWL
Sbjct: 65 RLWL 68
>gi|7488058|pir||T01919 probable Ap2 domain protein - Arabidopsis thaliana
>gi|3600050|gb|AAC35537.1| (AF080120) contains similarity to AP2
domain containing proteins [Arabidopsis thaliana]
>gi|4850293|emb|CAB43049.1| (AL049876) putative Ap2 domain protein
[Arabidopsis thaliana] >gi|7267813|emb|CAB81215.1| (AL161531)
putative Ap2 domain protein [Arabidopsis thaliana]
Length = 287
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | | 287
0 50 100 150 200 250
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 0.014, P = 0.014
Identities = 19/49 (38%), Positives = 26/49 (53%), Frame = +1
Query: 241 EKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
+K+KK+ V+ R + G+ PWG WA EI DP VR+WL
Sbjct: 67 KKRKKRVVTVPVVVTTATRK--FRGVRQRPWGKWAAEIRDPSRRVRVWL 113
>gi|7486739|pir||T05607 hypothetical protein F9D16.220 - Arabidopsis thaliana
>gi|4454044|emb|CAA23041.1| (AL035394) putative Ap2 domain protein
[Arabidopsis thaliana] >gi|7269224|emb|CAB81293.1| (AL161560)
putative Ap2 domain protein [Arabidopsis thaliana]
Length = 343
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 343
0 150 300
Plus Strand HSPs:
Score = 90 (31.7 bits), Expect = 0.014, P = 0.014
Identities = 23/56 (41%), Positives = 28/56 (50%), Frame = +1
Query: 220 KKVVSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
K+ V S E VSA + G + + G+ PWG WA EI DP VRLWL
Sbjct: 97 KRAVKS-ESTVSPVVSATTTTTGEKK---FRGVRQRPWGKWAAEIRDPLKRVRLWL 148
>gi|3282693|gb|AAC39489.1| (AF040959) AP2 domain family transcription factor
homolog [Arabidopsis thaliana]
>gi|4587996|gb|AAD25937.1|AF085279_10 (AF085279) ABI4 [Arabidopsis
thaliana] >gi|6598941|gb|AAF18736.1|AC018721_11 (AC018721) AP2
domain transcription factor (ABI4:abscisic acid-insensitive 4 )
[Arabidopsis thaliana]
Length = 328
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 328
0 150 300
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.028, P = 0.028
Identities = 22/70 (31%), Positives = 29/70 (41%), Frame = +1
Query: 178 DTTTTTTNQPPLPDKKVVSSCEKKKKKSVSAQKXSGGXXRNNX-YXGIXPWPWG*WAPEI 354
D T T+ P D SS ++K +K GG + Y G+ WG W EI
Sbjct: 15 DNNQTLTHNNPQSDSTTDSSTSSAQRK----RKGKGGPDNSKFRYRGVRQRSWGKWVAEI 70
Query: 355 XDPHXGVRLWL 387
+P R WL
Sbjct: 71 REPRKRTRKWL 81
>gi|8346773|emb|CAB93939.1| (AJ238739) AP2-domain DNA-binding protein
[Catharanthus roseus]
Length = 376
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 376
0 150 300
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.035, P = 0.034
Identities = 21/58 (36%), Positives = 28/58 (48%), Frame = +1
Query: 214 PDKKVVSSCEKKKKKSVSAQKXSGGXXRNN-XYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
P +KV + KK K GG ++ Y G+ WG W EI +P+ G RLWL
Sbjct: 54 PARKVPAKGSKK-----GCMKGKGGPENSHCKYRGVRQRTWGKWVAEIREPNRGSRLWL 107
>gi|10177206|dbj|BAB10308.1| (AB025637) contains similarity to transcription
factor~gene_id:MVP7.8 [Arabidopsis thaliana]
Length = 391
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | 391
0 150 300
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.037, P = 0.036
Identities = 18/43 (41%), Positives = 20/43 (46%), Frame = +1
Query: 259 SVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
S SG R Y G+ PWG WA EI DP R+WL
Sbjct: 170 SSETSSFSGDQPRRR-YRGVRQRPWGKWAAEIRDPFKAARVWL 211
>gi|9758475|dbj|BAB09004.1| (AB012239) contains similarity to ethylene
responsive element binding factor~gene_id:K11J9.13 [Arabidopsis
thaliana]
Length = 241
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | | 241
0 50 100 150 200
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 0.042, P = 0.042
Identities = 31/102 (30%), Positives = 48/102 (47%), Frame = +1
Query: 82 IISDFIGVKRGR-NLXAXELW---SELDPFSDLLGFDTTTTTTNQ--PPLPDKKVVSSCE 243
+++DF+ ++ +L +L SE P + +T NQ PPLP+ V +
Sbjct: 17 LLTDFVSMETDHPSLFTNQLHNFHSETGPRTITNQSPKPNSTLNQRKPPLPNLSVSRTVS 76
Query: 244 KKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHX-GVRLWL 387
K +K Y G+ PWG +A EI DP+ G R+WL
Sbjct: 77 TKTEKE----------EEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWL 115
>gi|5091503|dbj|BAA78738.1| (AB023482) EST AU055776(S20048) corresponds to a
region of the predicted gene.; Similar to Arabidopsis thaliana AP2
domain containing protein RAP2.10 mRNA, partial cds.(AF003103)
[Oryza sativa]
Length = 315
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | | | 315
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 0.068, P = 0.065
Identities = 21/80 (26%), Positives = 30/80 (37%), Frame = +1
Query: 148 LDPFSDLLGFDTTTTTTNQPPLPDKKVVSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPW 327
L P + D T PP P + ++ +V A G Y G+
Sbjct: 123 LAPLRNSARMDRREATVFLPPPPPPQPTQPQQQPAAAAVRAPVGGRGGGGGRQYRGVRMR 182
Query: 328 PWG*WAPEIXDPHXGVRLWL 387
WG W EI +P+ R+WL
Sbjct: 183 KWGKWVAEIREPNKRSRIWL 202
>gi|4699791|pdb|2GCC| Solution Structure Of The Gcc-Box Binding Domain, Nmr,
Minimized Mean Structure >gi|4699799|pdb|3GCC| Solution Structure
Of The Gcc-Box Binding Domain, Nmr, 46 Structures
Length = 70
Frame 1 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | 70
0 20 40 60
Plus Strand HSPs:
Score = 72 (25.3 bits), Expect = 0.17, P = 0.16
Identities = 14/32 (43%), Positives = 18/32 (56%), Frame = +1
Query: 295 RNNXYXGIXPWPWG*WAPEIXDP-HXGVRLWL 387
+ Y G+ PWG +A EI DP G R+WL
Sbjct: 2 KGKHYRGVRQRPWGKFAAEIRDPAKNGARVWL 33
>gi|4204307|gb|AAD10688.1| (AC003027) lcl|prt_seq No definition line found
[Arabidopsis thaliana] >gi|11414990|dbj|BAB18561.1| (AB047649) ERF
domain protein 10 [Arabidopsis thaliana]
Length = 245
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | 245
0 50 100 150 200
Plus Strand HSPs:
Score = 84 (29.6 bits), Expect = 0.18, P = 0.17
Identities = 22/58 (37%), Positives = 29/58 (50%), Frame = +1
Query: 223 KVVSSCEKKKKKSVS---AQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
K VS KK+K+V+ A G + Y G+ PWG +A EI DP R+WL
Sbjct: 22 KEVSDKGVKKRKNVTKALAVNDGGEKSKEVRYRGVRRRPWGRYAAEIRDPVKKKRVWL 79
>gi|4699734|pdb|1GCC|A Chain A, Solution Nmr Structure Of The Complex Of
Gcc-Box Binding Domain Of Aterf1 And Gcc-Box Dna, Minimized Average
Structure
Length = 63
Frame 1 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | 63
0 20 40 60
Plus Strand HSPs:
Score = 71 (25.0 bits), Expect = 0.22, P = 0.20
Identities = 14/28 (50%), Positives = 17/28 (60%), Frame = +1
Query: 307 YXGIXPWPWG*WAPEIXDP-HXGVRLWL 387
Y G+ PWG +A EI DP G R+WL
Sbjct: 3 YRGVRQRPWGKFAAEIRDPAKNGARVWL 30
>gi|6552733|gb|AAF16532.1|AC013482_6 (AC013482) T26F17.14 [Arabidopsis
thaliana]
Length = 230
Frame 1 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | | 230
0 50 100 150 200
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 0.25, P = 0.22
Identities = 20/68 (29%), Positives = 27/68 (39%), Frame = +1
Query: 184 TTTTTNQPPLPDKKVVSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDP 363
T++T + PL SS S S K + Y G+ WG W EI P
Sbjct: 10 TSSTKKEMPLSSSPSSSSSSSSSSSSSSC-KNKNKKSKIKKYKGVRMRSWGSWVSEIRAP 68
Query: 364 HXGVRLWL 387
+ R+WL
Sbjct: 69 NQKTRIWL 76
>gi|11358884|pir||T51834 transcription factor DREB2B, drought-induced
[validated] - Arabidopsis thaliana >gi|3738232|dbj|BAA33795.1|
(AB007791) DREB2B [Arabidopsis thaliana]
>gi|4126708|dbj|BAA36706.1| (AB016571) DREB2B [Arabidopsis
thaliana] >gi|6016692|gb|AAF01519.1|AC009991_15 (AC009991) DREB2B
transcription factor [Arabidopsis thaliana]
Length = 330
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 330
0 150 300
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 0.46, P = 0.37
Identities = 20/58 (34%), Positives = 27/58 (46%), Frame = +1
Query: 214 PDKKVVSSCEKKKKKSVSAQKXSGGXXRNN-XYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
P +KV + KK K GG ++ + G+ WG W EI +P G RLWL
Sbjct: 51 PKRKVPAKGSKK-----GCMKGKGGPDNSHCSFRGVRQRIWGKWVAEIREPKIGTRLWL 104
>gi|106688|pir||S24709 Ig alpha chain - human >gi|28566|emb|CAA78683.1|
(Z14960) codes for truncated alpha heavy Ig mRNA of alpha heavy
chain disease patient AYO [Homo sapiens]
Length = 77
Frame 2 hits (HSPs): _____________________
Annotated Domains: ____________________
__________________________________________________
Database sequence: | | | | | 77
0 20 40 60
__________________
Annotated Domains:
DOMO DM04904: 41..70
__________________
Plus Strand HSPs:
Score = 67 (23.6 bits), Expect = 0.59, P = 0.44
Identities = 12/32 (37%), Positives = 18/32 (56%), Frame = +2
Query: 140 GPSLTLSLTSLASIPPPPPPTNXPFQTKKWCH 235
GP T +++S+ S PP P P+ P + CH
Sbjct: 36 GPETTGTVSSVPSTPPTPSPSTPPTPSPSCCH 67
>gi|5281024|emb|CAB45963.1| (Z97343) EREBP-2 protein [Arabidopsis thaliana]
>gi|7268502|emb|CAB78753.1| (AL161546) EREBP-2 protein [Arabidopsis
thaliana]
Length = 225
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | 225
0 50 100 150 200
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 0.60, P = 0.45
Identities = 20/53 (37%), Positives = 27/53 (50%), Frame = +1
Query: 229 VSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDP-HXGVRLWL 387
V S KK+K+ S + + Y G+ PWG +A EI DP G R+WL
Sbjct: 80 VDSVPVKKEKT-SPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWL 132
>gi|11281604|pir||T47955 hypothetical protein F15G16.20 - Arabidopsis thaliana
>gi|6850854|emb|CAB71093.1| (AL132959) putative protein
[Arabidopsis thaliana]
Length = 315
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | | 315
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 0.65, P = 0.48
Identities = 16/47 (34%), Positives = 24/47 (51%), Frame = +1
Query: 247 KKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDPHXGVRLWL 387
K+++SV + + Y G+ PWG +A EI DP R+WL
Sbjct: 85 KEEESVVVEDDVSTSVKPKKYRGVRQRPWGKFAAEIRDPSSRTRIWL 131
>gi|7531108|sp|O80338|ERF2_ARATH ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2
(ATERF2) >gi|3434969|dbj|BAA32419.1| (AB008104) ethylene responsive
element binding factor 2 [Arabidopsis thaliana]
>gi|8809604|dbj|BAA97155.1| (AB018117) ethylene responsive element
binding factor 2 (ATERF2) [Arabidopsis thaliana]
Length = 243
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 243
0 50 100 150 200
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 0.69, P = 0.50
Identities = 18/52 (34%), Positives = 29/52 (55%), Frame = +1
Query: 232 SSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDP-HXGVRLWL 387
++ E+K KK++ + + + Y G+ PWG +A EI DP G R+WL
Sbjct: 95 TAMEEKPKKAIPVTETA---VKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWL 144
>gi|7531107|sp|O80337|ERFI_ARATH ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
(ATERF1) >gi|3434967|dbj|BAA32418.1| (AB008103) ethylene responsive
element binding factor 1 [Arabidopsis thaliana]
Length = 266
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | 266
0 50 100 150 200 250
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 0.81, P = 0.56
Identities = 20/53 (37%), Positives = 27/53 (50%), Frame = +1
Query: 229 VSSCEKKKKKSVSAQKXSGGXXRNNXYXGIXPWPWG*WAPEIXDP-HXGVRLWL 387
V S KK+K+ S + + Y G+ PWG +A EI DP G R+WL
Sbjct: 121 VDSVPVKKEKT-SPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWL 173
WARNING: HSPs involving 54 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.92
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.331 0.143 0.528
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.342 0.146 0.487
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.332 0.147 0.515
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.331 0.147 0.471
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.343 0.151 0.536
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.340 0.143 0.548
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 128 117 10. 71 3 12 22 0.094 33
29 0.10 35
+2 0 128 121 10. 71 3 12 22 0.098 33
29 0.11 35
+1 0 129 119 10. 71 3 12 22 0.096 33
29 0.11 35
-1 0 129 120 10. 71 3 12 22 0.097 33
29 0.11 35
-2 0 128 120 10. 71 3 12 22 0.097 33
29 0.11 35
-3 0 128 119 10. 71 3 12 22 0.096 33
29 0.11 35
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 104
No. of states in DFA: 586 (58 KB)
Total size of DFA: 169 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 141.44u 1.11s 142.55t Elapsed: 00:00:24
Total cpu time: 141.47u 1.16s 142.63t Elapsed: 00:00:24
Start: Mon Oct 1 22:48:05 2001 End: Mon Oct 1 22:48:29 2001
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000