R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 290 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|7437989|pir||T01329 ubiquitin-conjugating enzyme E2 - maize
>gi|2641619|gb|AAC12662.1| (AF032468) ubiquitin-conjugating enzyme
protein E2 [Zea mays]
Length = 169
Frame 3 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | | | 169
0 50 100 150
Plus Strand HSPs:
Score = 819 (288.3 bits), Expect = 1.2e-80, P = 1.2e-80
Identities = 148/166 (89%), Positives = 162/166 (97%), Frame = +3
Query: 78 AASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSF 257
+ASQASLLLQKQLKDL KNPVDGFSAGLVD++NIFEW VTIIGPPDTLY+GG+FNAIM+F
Sbjct: 4 SASQASLLLQKQLKDLAKNPVDGFSAGLVDDSNIFEWQVTIIGPPDTLYDGGYFNAIMTF 63
Query: 258 PSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIV 437
P NYPNSPPSV+FTSE+WHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIV
Sbjct: 64 PQNYPNSPPSVRFTSEMWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIV 123
Query: 438 LSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQEML 575
LSIISMLSSPNDESPAN+EAAK+WR++RD+FKKKV +CVRKSQEML
Sbjct: 124 LSIISMLSSPNDESPANIEAAKDWREKRDEFKKKVRQCVRKSQEML 169
>gi|2129758|pir||S71209 ubiquitin--protein ligase (EC 6.3.2.19) UBC7
[similarity] - Arabidopsis thaliana >gi|992704|gb|AAC49321.1|
(U33757) UBC7 [Arabidopsis thaliana] >gi|9759251|dbj|BAB09775.1|
(AB016890) ubiquitin-conjugating enzyme UBC7 [Arabidopsis thaliana]
Length = 166
Frame 3 hits (HSPs): __________________________________________________
Annotated Domains: _____
__________________________________________________
Database sequence: | | | | | 166
0 50 100 150
__________________
Annotated Domains:
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 78..92
__________________
Plus Strand HSPs:
Score = 817 (287.6 bits), Expect = 2.0e-80, P = 2.0e-80
Identities = 149/164 (90%), Positives = 160/164 (97%), Frame = +3
Query: 81 ASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFP 260
ASQASLLLQKQLKDLCK+PVDGFSAGLVDE NIFEWSVTIIGPPDTLYEGGFFNAIM+FP
Sbjct: 2 ASQASLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFP 61
Query: 261 SNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVL 440
NYPNSPP+V+FTS++WHPNVY DGRVCISILHPPG+DP+GYELASERWTPVHTVESI+L
Sbjct: 62 QNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIML 121
Query: 441 SIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQEM 572
SIISMLS PNDESPANVEAAKEWRD+RD+FKKKVSRCVRKSQEM
Sbjct: 122 SIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKSQEM 165
>gi|11272414|pir||T45703 ubiquitin--protein ligase (EC 6.3.2.19) UBC13
[similarity] - Arabidopsis thaliana >gi|992706|gb|AAC49322.1|
(U33758) UBC13 [Arabidopsis thaliana] >gi|6522625|emb|CAB62037.1|
(AL133298) ubiquitin conjugating enzyme E2 (UBC13) [Arabidopsis
thaliana]
Length = 166
Frame 3 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | | | 166
0 50 100 150
Plus Strand HSPs:
Score = 810 (285.1 bits), Expect = 1.1e-79, P = 1.1e-79
Identities = 148/163 (90%), Positives = 158/163 (96%), Frame = +3
Query: 84 SQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPS 263
SQA LLLQKQLKDLCK+PVDGFSAGLVDE NIFEWSVTIIGPPDTLYEGGFF AIMSFP
Sbjct: 3 SQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQ 62
Query: 264 NYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLS 443
NYPNSPP+V+FTS+IWHPNVYPDGRVCISILHPPG+DP+GYELASERWTPVHTVESI+LS
Sbjct: 63 NYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLS 122
Query: 444 IISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQEM 572
IISMLS PNDESPANVEAAKEWR++RD+FKKKVSRCVRKSQEM
Sbjct: 123 IISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRKSQEM 165
>gi|7437988|pir||T02943 ubiquitin-conjugating enzyme - maize
>gi|2624417|emb|CAA05772.1| (AJ002959) Ubiquitin carrier protein
[Zea mays]
Length = 169
Frame 3 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | | 169
0 50 100 150
Plus Strand HSPs:
Score = 797 (280.6 bits), Expect = 2.6e-78, P = 2.6e-78
Identities = 144/163 (88%), Positives = 158/163 (96%), Frame = +3
Query: 84 SQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPS 263
+QASLLLQKQL+DL K+PVDGFSAGLVD++N+FEW VTIIGPPDTLY+GG+FNAIMSFP
Sbjct: 6 TQASLLLQKQLRDLAKHPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQ 65
Query: 264 NYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLS 443
NYPNSPPSV+FTSE+WHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLS
Sbjct: 66 NYPNSPPSVRFTSEMWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLS 125
Query: 444 IISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQEM 572
IISMLSSPNDESPAN+EAAKEWR++R+DFKKKV R VRKSQEM
Sbjct: 126 IISMLSSPNDESPANIEAAKEWREQREDFKKKVRRIVRKSQEM 168
>gi|1174852|sp|P42747|UBC7_ARATH UBIQUITIN-CONJUGATING ENZYME E2-19 KD
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (TAYO29)
>gi|2129757|pir||S46656 ubiquitin--protein ligase (EC 6.3.2.19)
UBC14 [similarity] - Arabidopsis thaliana
>gi|600389|emb|CAA51200.1| (X72625) ubiquitin conjugating enzyme E2
[Arabidopsis thaliana] >gi|992708|gb|AAC49323.1| (U33759) UBC14
[Arabidopsis thaliana] >gi|7076781|emb|CAB75896.1| (AL132975)
ubiquitin-conjugating enzyme UBC3 [Arabidopsis thaliana]
Length = 167
Frame 3 hits (HSPs): __________________________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 167
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 47..94
DOMO DM00225: UBIQUITIN-CONJUGATINGENZYMES 3..164
Entrez binding site: UBIQUITIN (BY SIMILARITY). 90
PFAM UQ_con: Ubiquitin-conjugating enzyme 2..162
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 4..161
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 79..93
__________________
Plus Strand HSPs:
Score = 787 (277.0 bits), Expect = 3.0e-77, P = 3.0e-77
Identities = 144/167 (86%), Positives = 157/167 (94%), Frame = +3
Query: 75 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 254
MA +QASLLLQKQLKDLCK PVDGFSAGLVDE N+F+WSV+I+GPPDTLYEGGFFNAIMS
Sbjct: 1 MANNQASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMS 60
Query: 255 FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESI 434
FP NYP SPP+V FTSE+WHPNVY DG+VCISILHPPG+DP+GYELASERWTPVHTVESI
Sbjct: 61 FPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESI 120
Query: 435 VLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQEML 575
VLSIISMLS PNDESPANVEAAKEWRD R +F+KKVSRCVR+SQEML
Sbjct: 121 VLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRRSQEML 167
>gi|136647|sp|P25868|UBC7_WHEAT UBIQUITIN-CONJUGATING ENZYME E2-20 KD
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|100813|pir||A41547 ubiquitin-conjugating enzyme E2 - wheat
Length = 168
Frame 3 hits (HSPs): ____________________________________________
Frame 1 hits (HSPs): ______
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 168
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 49..96
DOMO DM00225: UBIQUITIN-CONJUGATINGENZYMES 5..165
Entrez binding site: UBIQUITIN (BY SIMILARITY). 92
PFAM UQ_con: Ubiquitin-conjugating enzyme 4..163
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 1..162
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 81..95
__________________
Plus Strand HSPs:
Score = 682 (240.1 bits), Expect = 1.6e-68, Sum P(2) = 1.6e-68
Identities = 121/147 (82%), Positives = 137/147 (93%), Frame = +3
Query: 135 PVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPSVKFTSEIWH 314
P GF G VD++N+FEW VTIIGPP+TLY+GG+FNAIMSFP NYPNSPP+V+FTSE+WH
Sbjct: 23 PSMGFQLGFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWH 82
Query: 315 PNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVE 494
PNVYPDGRVCISI HPPG+DPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPAN+E
Sbjct: 83 PNVYPDGRVCISI-HPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIE 141
Query: 495 AAKEWRDRRDDFKKKVSRCVRKSQEML 575
AAK+WR+++D+FKKKV R VRKSQEML
Sbjct: 142 AAKDWREKQDEFKKKVRRAVRKSQEML 168
Score = 41 (14.4 bits), Expect = 1.6e-68, Sum P(2) = 1.6e-68
Identities = 10/18 (55%), Positives = 13/18 (72%), Frame = +1
Query: 88 RQAFSFKSSSKIFAKTPS 141
R+A S +SSS+I TPS
Sbjct: 7 RRASSSRSSSEISRTTPS 24
>gi|7493141|pir||T39286 probable ubiquitin--protein ligase (EC 6.3.2.19) e2 -
fission yeast (Schizosaccharomyces pombe)
>gi|5531471|emb|CAB50972.1| (AL096851) probable
ubiquitin-conjugating enzyme e2 (EC 6.3.2.19) [Schizosaccharomyces
pombe]
Length = 167
Frame 3 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | | | 167
0 50 100 150
Plus Strand HSPs:
Score = 605 (213.0 bits), Expect = 5.8e-58, P = 5.8e-58
Identities = 109/167 (65%), Positives = 137/167 (82%), Frame = +3
Query: 75 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 254
M +S + LL+KQLK++ KNP GFS GLVD+ +IFEW V IIGP DTLYEGGFF+A +S
Sbjct: 1 MPSSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLS 60
Query: 255 FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESI 434
FP +YP PP +KFT+EIWHPNV+P+G VCISILHPPG+D GYE A ERW PVH+ E+I
Sbjct: 61 FPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETI 120
Query: 435 VLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQEML 575
++S+ISMLSSPNDESPAN++AAKE+R+ +FKK+V R VR+S EM+
Sbjct: 121 LISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRRSIEMI 167
>gi|3024775|sp|Q99462|UBCG_HUMAN UBIQUITIN-CONJUGATING ENZYME E2 G1
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|1741957|dbj|BAA11410.1| (D78514) ubiquitin-conjugating enzyme
[Homo sapiens] >gi|3818632|gb|AAC69605.1| (AF099093)
ubiquitin-conjugating enzyme UBC7 [Rattus norvegicus]
Length = 170
Frame 3 hits (HSPs): _________________________________________________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | 170
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 47..94
Entrez binding site: UBIQUITIN (BY SIMILARITY). 90
PFAM UQ_con: Ubiquitin-conjugating enzyme 2..163
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 10..162
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 79..93
__________________
Plus Strand HSPs:
Score = 592 (208.4 bits), Expect = 1.4e-56, P = 1.4e-56
Identities = 106/166 (63%), Positives = 134/166 (80%), Frame = +3
Query: 75 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 254
M Q++LLL++QL +L KNPV+GFSAGL+D+ +++ W V IIGPPDTLYEGG F A ++
Sbjct: 1 MTELQSALLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLT 60
Query: 255 FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESI 434
FP +YP PP +KF +EIWHPNV +G VCISILH PGED GYE ERW P+HTVE+I
Sbjct: 61 FPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETI 120
Query: 435 VLSIISMLSSPNDESPANVEAAKEWR-DRRDDFKKKVSRCVRKSQE 569
++S+ISML+ PN +SPANV+AAKEWR DR +FK+KV+RCVRKSQE
Sbjct: 121 MISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166
>gi|464984|sp|P34477|UBC7_CAEEL PROBABLE UBIQUITIN-CONJUGATING ENZYME E2-19 KD
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|482189|pir||S40982 hypothetical protein F58A4.10 -
Caenorhabditis elegans >gi|3877825|emb|CAA80166.1| (Z22179) similar
to ubiquitin conjugating enzymes, contains similarity to Pfam
domain: PF00179 (Ubiquitin-conjugating enzyme), Score=348.0,
E-value=3.3e-101, N=1~cDNA EST yk381a9.3 comes from this gene~cDNA
EST yk486g12.5 comes from this gene~cDNA EST >
Length = 164
Frame 3 hits (HSPs): __________________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 164
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 45..92
DOMO DM00225: UBIQUITIN-CONJUGATINGENZYMES 1..162
Entrez binding site: UBIQUITIN (BY SIMILARITY). 88
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..160
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 5..159
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 77..91
__________________
Plus Strand HSPs:
Score = 586 (206.3 bits), Expect = 6.0e-56, P = 6.0e-56
Identities = 106/161 (65%), Positives = 131/161 (81%), Frame = +3
Query: 87 QASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSN 266
Q+SLLL+KQL D+ + PVDGFSAGLVD+ +I++W V +IGPPDTLYEGGFF AI+ FP +
Sbjct: 3 QSSLLLKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRD 62
Query: 267 YPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSI 446
YP PP +KF SEIWHPN+ +G VCISILH PG+D GYE ERW PVHTVE+I+LS+
Sbjct: 63 YPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSV 122
Query: 447 ISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQE 569
ISML+ PN ESPANV+AAK R+ +FKKKV++CVR+SQE
Sbjct: 123 ISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQCVRRSQE 163
>gi|7299803|gb|AAF54982.1| (AE003701) CG9602 gene product [Drosophila
melanogaster]
Length = 168
Frame 3 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | | 168
0 50 100 150
Plus Strand HSPs:
Score = 583 (205.2 bits), Expect = 1.2e-55, P = 1.2e-55
Identities = 107/165 (64%), Positives = 133/165 (80%), Frame = +3
Query: 75 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 254
M+ QASLLL +QL +L ++PV+GFSAGLV +++IF+W V IIGPPDTLYEGGFF A +
Sbjct: 1 MSELQASLLLNRQLSELQRHPVEGFSAGLVSDSDIFKWEVVIIGPPDTLYEGGFFKAHLI 60
Query: 255 FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESI 434
FP YP PP +KF +EIWHPN+ G VCISILH PG+D GYE A ERW PVHTVE+I
Sbjct: 61 FPKEYPLRPPKMKFITEIWHPNIDKAGDVCISILHEPGDDKWGYEKAEERWLPVHTVETI 120
Query: 435 VLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQE 569
+LS+ISML+ PNDES ANV+AAKE+R+ +FK+KV+RCVR+SQE
Sbjct: 121 LLSVISMLTDPNDESAANVDAAKEYRENYAEFKRKVTRCVRRSQE 165
>gi|3347990|gb|AAC27763.1| (AF076597) ubiquitin-conjugating enzyme protein UbcC
[Dictyostelium discoideum]
Length = 235
Frame 3 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | | 235
0 50 100 150 200
Plus Strand HSPs:
Score = 506 (178.1 bits), Expect = 1.8e-47, P = 1.8e-47
Identities = 91/158 (57%), Positives = 116/158 (73%), Frame = +3
Query: 90 ASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNY 269
AS LLQ Q K + P++G + LVDE N+FEW I GPP+T YEGG F M FP++Y
Sbjct: 3 ASKLLQNQFKKISSEPIEGVAFDLVDE-NLFEWRAYIEGPPETDYEGGIFQIQMKFPNDY 61
Query: 270 PNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSII 449
P SPP + F SE WHPNVYPDG+VCISILHPPGED EL ERW P TV++I+LS+I
Sbjct: 62 PMSPPVLIFQSEFWHPNVYPDGKVCISILHPPGEDETSGELPEERWLPTQTVQTIILSVI 121
Query: 450 SMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
S+LS+PN SPANV+A+ EWR+ RD++KK++ V+K+
Sbjct: 122 SLLSAPNTSSPANVDASVEWRNNRDNYKKRIRELVQKA 159
>gi|12742652 ref|XP_009804.2| ubiquitin-conjugating enzyme E2G 2 (homologous to
yeast UBC7) [Homo sapiens] >gi|9988064|sp|P56554|UBCJ_HUMAN
UBIQUITIN-CONJUGATING ENZYME E2 G2 (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN) >gi|7717436|emb|CAB90551.1| (AL163300)
human ubiquitin conjugating enzyme G2 EC 6.3.2.19. [Homo sapiens]
Length = 165
Frame 3 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | | 165
0 50 100 150
Plus Strand HSPs:
Score = 492 (173.2 bits), Expect = 5.4e-46, P = 5.4e-46
Identities = 90/161 (55%), Positives = 117/161 (72%), Frame = +3
Query: 81 ASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFP 260
A A L + K L NP +G AG ++E N FEW I+GP DT +E G F AI+SFP
Sbjct: 2 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFP 61
Query: 261 SNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVL 440
+YP SPP ++FT E++HPN+YPDGRVCISILH PG+DP GYE ++ERW+PV +VE I+L
Sbjct: 62 LDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILL 121
Query: 441 SIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
S++SML+ PNDES ANV+A+K WRD R+ F K + V+KS
Sbjct: 122 SVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162
>gi|9790275 ref|NP_062777.1| ubiquitin-conjugating enzyme E2G 2;
ubiquitin-conjugating enzyme E2G 2 (homologous to yeast UBC7);
ubiquitin-conjugating enzyme 7 homolog [Mus musculus]
>gi|6649658|gb|AAF21503.1| (U93241) Ubc7p homolog [Mus musculus]
Length = 148
Frame 3 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | 148
0 50 100
Plus Strand HSPs:
Score = 481 (169.3 bits), Expect = 8.0e-45, P = 8.0e-45
Identities = 85/144 (59%), Positives = 111/144 (77%), Frame = +3
Query: 132 NPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPSVKFTSEIW 311
NP +G AG ++E N FEW I+GP DT +E G F AI+SFP +YP SPP ++FT E++
Sbjct: 2 NPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMF 61
Query: 312 HPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANV 491
HPN+YPDGRVCISILH PG+DP GYE ++ERW+PV +VE I+LS++SML+ PNDES ANV
Sbjct: 62 HPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANV 121
Query: 492 EAAKEWRDRRDDFKKKVSRCVRKS 563
+A+K WRD R+ F K + V+KS
Sbjct: 122 DASKMWRDDREQFYKIAKQIVQKS 145
>gi|12718396|emb|CAC28704.1| (AL513444) probable ubiquitin-conjugating enzyme
ubcP3 [Neurospora crassa]
Length = 166
Frame 3 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | | 166
0 50 100 150
Plus Strand HSPs:
Score = 481 (169.3 bits), Expect = 8.0e-45, P = 8.0e-45
Identities = 85/163 (52%), Positives = 118/163 (72%), Frame = +3
Query: 75 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 254
M+ + A L ++ + L NP +G +AG + E ++ W I GP T +EGG F A +
Sbjct: 1 MSLNVAQRRLLQEYRALTNNPPEGITAGPISEDDLLHWECLIQGPEGTPFEGGVFPAELK 60
Query: 255 FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESI 434
FP++YP+ PP++KF +I+HPNVYP G VCISILHPPG+DPN YE ASERW+P+ +VE I
Sbjct: 61 FPNDYPHMPPTMKFLGDIFHPNVYPSGLVCISILHPPGDDPNHYETASERWSPIQSVEKI 120
Query: 435 VLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
+LS++SML+ PNDESPANVEAAK WR++R +++ +V VR S
Sbjct: 121 LLSVMSMLAEPNDESPANVEAAKMWREKRSEYEARVKASVRAS 163
>gi|4507781 ref|NP_003334.1| ubiquitin-conjugating enzyme E2G 2 (homologous to
yeast UBC7); Ubiquitin-conjugating enzyme E2G 2; human ubiquitin
conjugating enzyme G2 [Homo sapiens] >gi|3004909|gb|AAC32312.1|
(AF032456) ubiquitin conjugating enzyme G2 [Homo sapiens]
Length = 165
Frame 3 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | | 165
0 50 100 150
Plus Strand HSPs:
Score = 473 (166.5 bits), Expect = 5.6e-44, P = 5.6e-44
Identities = 88/161 (54%), Positives = 113/161 (70%), Frame = +3
Query: 81 ASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFP 260
A A L K L NP +G AG ++E N FEW I+GP DT +E G F AI+SFP
Sbjct: 2 AGTALKRLMAVYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFP 61
Query: 261 SNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVL 440
+YP SPP ++FT E++HPN+YPDGRVCISILH PG+DP+G ERW+PV +VE I+L
Sbjct: 62 LDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPHGLREQPERWSPVQSVEKILL 121
Query: 441 SIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
S++SML+ PNDES ANV+A+K WRD R+ F K + V+KS
Sbjct: 122 SVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162
>gi|7293244|gb|AAF48626.1| (AE003502) Ubc7 gene product [Drosophila
melanogaster]
Length = 167
Frame 3 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | | 167
0 50 100 150
Plus Strand HSPs:
Score = 473 (166.5 bits), Expect = 5.6e-44, P = 5.6e-44
Identities = 86/161 (53%), Positives = 114/161 (70%), Frame = +3
Query: 81 ASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFP 260
A A L + K L +P +G AG + E N FEW I GP T +EGG F A + FP
Sbjct: 2 AGSALRRLMAEYKQLTLDPPEGIVAGPISEDNFFEWEALIAGPEGTCFEGGVFPARLIFP 61
Query: 261 SNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVL 440
++YP SPP +KFT +++HPN++ DGRVCISILH PG+DP GYEL++ERW+PV +VE I+L
Sbjct: 62 TDYPLSPPKMKFTCDMFHPNIFADGRVCISILHAPGDDPMGYELSAERWSPVQSVEKILL 121
Query: 441 SIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
S++SML+ PNDES ANV+AA WR++RD+F R VRK+
Sbjct: 122 SVVSMLAEPNDESGANVDAAIMWREQRDEFNAIARRLVRKT 162
>gi|6425521|emb|CAB60431.1| (AL110500) contains similarity to Pfam domain:
PF00179 (Ubiquitin-conjugating enzyme), Score=291.3,
E-value=3.8e-84, N=1~cDNA EST yk221a12.3 comes from this gene~cDNA
EST yk221a12.5 comes from this gene~cDNA EST yk573c8.3 comes from
this gene~cDNA EST >
Length = 170
Frame 3 hits (HSPs): ________________________________________________
__________________________________________________
Database sequence: | | | | | 170
0 50 100 150
Plus Strand HSPs:
Score = 470 (165.4 bits), Expect = 1.2e-43, P = 1.2e-43
Identities = 85/161 (52%), Positives = 111/161 (68%), Frame = +3
Query: 81 ASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFP 260
A A L + K+L P +G A +DE N FEW I GP +T + G F A ++FP
Sbjct: 2 AGYALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFP 61
Query: 261 SNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVL 440
+YP SPP ++FT I+HPN+Y DGRVCISILH PG+DP GYEL++ERW+PV ++E I+L
Sbjct: 62 QDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILL 121
Query: 441 SIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
S++SML+ PNDESPANV AAK WR+ R F+K VRK+
Sbjct: 122 SVVSMLAEPNDESPANVSAAKMWREDRAQFEKIADSLVRKT 162
>gi|7799043|emb|CAB90824.1| (AJ277746) ubiquitin conjugating enzyme [Drosophila
melanogaster]
Length = 200
Frame 3 hits (HSPs): ______________________________________
__________________________________________________
Database sequence: | | | | | 200
0 50 100 150
Plus Strand HSPs:
Score = 459 (161.6 bits), Expect = 1.7e-42, P = 1.7e-42
Identities = 82/150 (54%), Positives = 109/150 (72%), Frame = +3
Query: 81 ASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFP 260
A A L + K L +P +G AG + E N FEW I GP T +EGG F A + FP
Sbjct: 2 AGSALRRLMAEYKQLTLDPPEGIVAGPISEDNFFEWEALIAGPEGTCFEGGVFPARLIFP 61
Query: 261 SNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVL 440
++YP SPP +KFT +++HPN++ DGRVCISILH PG+DP GYEL++ERW+PV +VE I+L
Sbjct: 62 TDYPLSPPKMKFTCDMFHPNIFADGRVCISILHAPGDDPMGYELSAERWSPVQSVEKILL 121
Query: 441 SIISMLSSPNDESPANVEAAKEWRDRRDDF 530
S++SML+ PNDES ANV+AA WR++RD+F
Sbjct: 122 SVVSMLAEPNDESGANVDAAIMWREQRDEF 151
>gi|7510556|pir||T27470 hypothetical protein Y87G2A.r - Caenorhabditis elegans
Length = 237
Frame 3 hits (HSPs): _____________ _______________________
__________________________________________________
Database sequence: | | | | | | 237
0 50 100 150 200
Plus Strand HSPs:
Score = 362 (127.4 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 63/103 (61%), Positives = 81/103 (78%), Frame = +3
Query: 255 FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESI 434
F +YP SPP ++FT I+HPN+Y DGRVCISILH PG+DP GYEL++ERW+PV ++E I
Sbjct: 127 FKKDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKI 186
Query: 435 VLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
+LS++SML+ PNDESPANV AAK WR+ R F+K VRK+
Sbjct: 187 LLSVVSMLAEPNDESPANVSAAKMWREDRAQFEKIADSLVRKT 229
Score = 113 (39.8 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 23/60 (38%), Positives = 31/60 (51%), Frame = +3
Query: 81 ASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFP 260
A A L + K+L P +G A +DE N FEW I GP +T + G F A ++FP
Sbjct: 2 AGYALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFP 61
>gi|10185167|emb|CAC08543.1| (AL441603) ubiquitin-conjugating enzyme e2-18 kda
[Schizosaccharomyces pombe]
Length = 166
Frame 3 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | | 166
0 50 100 150
Plus Strand HSPs:
Score = 454 (159.8 bits), Expect = 5.8e-42, P = 5.8e-42
Identities = 83/163 (50%), Positives = 114/163 (69%), Frame = +3
Query: 75 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 254
M+ + A L K+ K+L +N DG +AG +E + F W I GP T +EGG + A +
Sbjct: 1 MSKAMALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLK 60
Query: 255 FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESI 434
FPS+YP PP++KF E +HPNVY DG VCISILH PG+DPN YE +SERW+PV +VE I
Sbjct: 61 FPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKI 120
Query: 435 VLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
+LS++SML+ PNDES AN++A K WR+ R+++ + V R RK+
Sbjct: 121 LLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARKT 163
>gi|6323664 ref|NP_013735.1| ubiquitin conjugating enzyme; Qri8p [Saccharomyces
cerevisiae] >gi|401242|sp|Q02159|UBC7_YEAST UBIQUITIN-CONJUGATING
ENZYME E2-18 KD (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER
PROTEIN) >gi|322973|pir||S28951 ubiquitin-conjugating enzyme UBC7 -
yeast (Saccharomyces cerevisiae) >gi|2981900|pdb|2UCZ| Ubiquitin
Conjugating Enzyme (Ubc7) From Saccharomyces Cerevisiae
>gi|4257|emb|CAA47302.1| (X66829) ubiquitin-conjugating enzyme
[Saccharomyces cerevisiae] >gi|5523|emb|CAA48846.1| (X69100)
ubiquitin-conjugating enzyme [Saccharomyces cerevisiae]
>gi|798933|emb|CAA89125.1| (Z49211) Ubc7p [Saccharomyces
cerevisiae] >gi|444282|prf||1906336A ubiquitin-conjugating enzyme
[Saccharomyces cerevisiae]
Length = 165
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 165
0 50 100 150
Plus Strand HSPs:
Score = 452 (159.1 bits), Expect = 9.4e-42, P = 9.4e-42
Identities = 85/154 (55%), Positives = 106/154 (68%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L K+L+ L K+ G AG E NIF W I GPPDT Y G FNA + FP +YP SP
Sbjct: 9 LLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSP 68
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P + FT I HPN+YP+G VCISILH PG+DPN YELA ERW+PV +VE I+LS++SMLS
Sbjct: 69 PKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLS 128
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
PN ES AN++A WRD R +F+++V + KS
Sbjct: 129 EPNIESGANIDACILWRDNRPEFERQVKLSILKS 162
>gi|1381181|gb|AAB02656.1| (U58652) ubiquitin-conjugating enzyme E2-32k
[Oryctolagus cuniculus]
Length = 250
Frame 3 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | | 250
0 50 100 150 200
Plus Strand HSPs:
Score = 452 (159.1 bits), Expect = 9.4e-42, P = 9.4e-42
Identities = 83/162 (51%), Positives = 118/162 (72%), Frame = +3
Query: 75 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 254
M +SQ +L+L+ LK L + PV+GF LVDE++++ W V I GPP+TLYEGG+F A +
Sbjct: 18 MTSSQKALMLE--LKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIK 75
Query: 255 FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESI 434
FP +YP SPP+ +F +++WHPN+Y +G VCISILHPP +DP EL SERW P V +I
Sbjct: 76 FPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTI 135
Query: 435 VLSIISMLSSPNDESPANVEAA---KEWRDRRDDFKKKVSRCVRK 560
+LS+IS+L+ PN SPANV+A+ ++WRD + K+ + +RK
Sbjct: 136 LLSVISLLNEPNTFSPANVDASVMFRKWRDSKGK-DKEYAEIIRK 179
>gi|11526508 ref|XP_005546.1| hypothetical protein FLJ20419 [Homo sapiens]
>gi|2501429|sp|Q29503|UBC3_RABIT UBIQUITIN-CONJUGATING ENZYME E2-32
KD COMPLEMENTING (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER
PROTEIN) (E2-CDC34)
Length = 238
Frame 3 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | | 238
0 50 100 150 200
Plus Strand HSPs:
Score = 452 (159.1 bits), Expect = 9.4e-42, P = 9.4e-42
Identities = 83/162 (51%), Positives = 118/162 (72%), Frame = +3
Query: 75 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 254
M +SQ +L+L+ LK L + PV+GF LVDE++++ W V I GPP+TLYEGG+F A +
Sbjct: 6 MTSSQKALMLE--LKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIK 63
Query: 255 FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESI 434
FP +YP SPP+ +F +++WHPN+Y +G VCISILHPP +DP EL SERW P V +I
Sbjct: 64 FPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTI 123
Query: 435 VLSIISMLSSPNDESPANVEAA---KEWRDRRDDFKKKVSRCVRK 560
+LS+IS+L+ PN SPANV+A+ ++WRD + K+ + +RK
Sbjct: 124 LLSVISLLNEPNTFSPANVDASVMFRKWRDSKGK-DKEYAEIIRK 167
>gi|2501434|sp|O00102|UBC7_SCHPO UBIQUITIN-CONJUGATING ENZYME E2-18 KD
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|11272355|pir||T43235 ubiquitin-conjugating enzyme ubcP3 -
fission yeast (Schizosaccharomyces pombe)
>gi|2190252|dbj|BAA20373.1| (D85544) UbcP3 [Schizosaccharomyces
pombe]
Length = 166
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 166
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 47..94
Entrez binding site: UBIQUITIN (BY SIMILARITY). 90
PFAM UQ_con: Ubiquitin-conjugating enzyme 3..162
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 8..161
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 79..93
__________________
Plus Strand HSPs:
Score = 450 (158.4 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 81/154 (52%), Positives = 110/154 (71%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L K+ K+L +N DG +AG +E + F W I GP T +EGG + A + FPS+YP P
Sbjct: 10 LMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGP 69
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P++KF E +HPNVY DG VCISILH PG+DPN YE +SERW+PV +VE I+LS++SML+
Sbjct: 70 PTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLA 129
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
PNDES AN++A K WR+ R+++ + V R RK+
Sbjct: 130 EPNDESGANIDACKMWREDREEYCRVVRRLARKT 163
>gi|7294260|gb|AAF49611.1| (AE003530) CG7656 gene product [Drosophila
melanogaster]
Length = 341
Frame 3 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | 341
0 150 300
Plus Strand HSPs:
Score = 447 (157.4 bits), Expect = 3.2e-41, P = 3.2e-41
Identities = 82/158 (51%), Positives = 111/158 (70%), Frame = +3
Query: 42 SSLRSSTCLPFMAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTL 221
SS + T P +A +A L + K L + PV+GF L+++ N+FEW V I GPPDTL
Sbjct: 50 SSAAAPTTTPSSSAVRA---LAMEYKSLQEEPVEGFRVKLINDDNLFEWEVAIFGPPDTL 106
Query: 222 YEGGFFNAIMSFPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASE 401
Y+GG+F A M FP +YP SPPS++F +++WHPNVY +G +CISILHPP +DP EL E
Sbjct: 107 YQGGYFKAHMKFPHDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCE 166
Query: 402 RWTPVHTVESIVLSIISMLSSPNDESPANVEAA---KEWRD 515
RW P V +I+LS+IS+L+ PN SPANV+A+ + WRD
Sbjct: 167 RWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRRWRD 207
>gi|8923388 ref|NP_060281.1| hypothetical protein FLJ20419 [Homo sapiens]
>gi|7020506|dbj|BAA91156.1| (AK000426) unnamed protein product
[Homo sapiens]
Length = 238
Frame 3 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | | 238
0 50 100 150 200
Plus Strand HSPs:
Score = 444 (156.3 bits), Expect = 6.6e-41, P = 6.6e-41
Identities = 83/162 (51%), Positives = 116/162 (71%), Frame = +3
Query: 75 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 254
M +SQ +L+L+ LK L + PV+GF LVDE+++ W V I GPP+TLYEGG+F A +
Sbjct: 6 MTSSQKALMLE--LKSLQEEPVEGFRITLVDESDLHNWEVAIFGPPNTLYEGGYFKAHIK 63
Query: 255 FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESI 434
FP +YP SPP+ +F +++WHPN+Y +G VCISILHPP +DP EL SERW P V +I
Sbjct: 64 FPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTI 123
Query: 435 VLSIISMLSSPNDESPANVEAA---KEWRDRRDDFKKKVSRCVRK 560
+LS IS+L+ PN SPANV+A+ ++WRD + K+ + +RK
Sbjct: 124 LLSAISLLNEPNTFSPANVDASVMFRKWRDSKGK-DKEYAEIIRK 167
>gi|2136341|pir||A49630 ubiquitin conjugating enzyme - human (fragment)
>gi|388309|gb|AAC37534.1| (L22005) ubiquitin conjugating enzyme
[Homo sapiens]
Length = 298
Frame 3 hits (HSPs): _____________________________
Annotated Domains: ____
__________________________________________________
Database sequence: | | | | | | | 298
0 50 100 150 200 250
__________________
Annotated Domains:
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 144..158
__________________
Plus Strand HSPs:
Score = 435 (153.1 bits), Expect = 6.0e-40, P = 6.0e-40
Identities = 80/164 (48%), Positives = 116/164 (70%), Frame = +3
Query: 69 PFMAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAI 248
P + +SQ +LLL+ LK L + PV+GF LVDE +++ W V I GPP+T YEGG+F A
Sbjct: 66 PLVPSSQKALLLE--LKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKAR 123
Query: 249 MSFPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVE 428
+ FP +YP SPP+ +F +++WHPN+Y G VCISILHPP +DP EL SERW P V
Sbjct: 124 LKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVR 183
Query: 429 SIVLSIISMLSSPNDESPANVEAA---KEWRDRRDDFKKKVSRCVRK 560
+I+LS+IS+L+ PN SPANV+A+ ++W++ + ++ + +RK
Sbjct: 184 TILLSVISLLNEPNTFSPANVDASVMYRKWKESKGK-DREYTDIIRK 229
>gi|2507505|sp|P49427|UBC3_HUMAN UBIQUITIN-CONJUGATING ENZYME E2-32 KDA
COMPLEMENTING (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER
PROTEIN) (E2-CDC34)
Length = 236
Frame 3 hits (HSPs): ____________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 236
0 50 100 150 200
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 50..97
Entrez binding site: UBIQUITIN (BY SIMILARITY). 93
Entrez Domain: ASP/GLU-RICH (ACIDIC). 200..236
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..171
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 1..161
PRODOM PD030860: UBC3(2) 164..202
PRODOM PD073756: UBC3_HUMAN 204..235
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 82..96
__________________
Plus Strand HSPs:
Score = 435 (153.1 bits), Expect = 6.0e-40, P = 6.0e-40
Identities = 80/164 (48%), Positives = 116/164 (70%), Frame = +3
Query: 69 PFMAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAI 248
P + +SQ +LLL+ LK L + PV+GF LVDE +++ W V I GPP+T YEGG+F A
Sbjct: 4 PLVPSSQKALLLE--LKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKAR 61
Query: 249 MSFPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVE 428
+ FP +YP SPP+ +F +++WHPN+Y G VCISILHPP +DP EL SERW P V
Sbjct: 62 LKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVR 121
Query: 429 SIVLSIISMLSSPNDESPANVEAA---KEWRDRRDDFKKKVSRCVRK 560
+I+LS+IS+L+ PN SPANV+A+ ++W++ + ++ + +RK
Sbjct: 122 TILLSVISLLNEPNTFSPANVDASVMYRKWKESKGK-DREYTDIIRK 167
>gi|9628248 ref|NP_042834.1| ubiquitin-conjugating enzyme [African swine fever
virus] >gi|136650|sp|P27949|UBC_ASFB7 UBIQUITIN-CONJUGATING ENZYME
E2-21 KD (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|70651|pir||UQXFAS ubiquitin--protein ligase (EC 6.3.2.19) E2 -
African swine fever virus (strain BA71V) >gi|210624|gb|AAA42704.1|
(M77121) ubiquitin conjugating-protein [African swine fever virus]
>gi|780510|gb|AAA65370.1| (U18466) ubiquitin-conjugating enzyme
[African swine fever virus] >gi|1097534|prf||2113434FC
ubiquitin-conjugating enzyme [African swine fever virus]
Length = 215
Frame 3 hits (HSPs): _____________________________________
__________________________________________________
Database sequence: | | | | | | 215
0 50 100 150 200
Plus Strand HSPs:
Score = 386 (135.9 bits), Expect = 9.3e-35, P = 9.3e-35
Identities = 75/157 (47%), Positives = 106/157 (67%), Frame = +3
Query: 93 SLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYP 272
S L + + L +NP + F V+E NI EW V + GPPDTLYEGG F A ++FP YP
Sbjct: 3 SRFLIAEYRHLIENPSENFKIS-VNENNITEWDVILRGPPDTLYEGGLFKAKVAFPPEYP 61
Query: 273 NSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIIS 452
+PP + FTSE+WHPN+YPDGR+CISILH + G W+P +++I+LS+IS
Sbjct: 62 YAPPKLTFTSEMWHPNIYPDGRLCISILHGDNAEEQGMT-----WSPAQKIDTILLSVIS 116
Query: 453 MLSSPNDESPANVEAAKEWRDR--RDDFKK---KVSRCVRKS 563
+L+ PN +SPANV+AAK +R ++D + +V + V+KS
Sbjct: 117 LLNEPNPDSPANVDAAKSYRKYVYKEDLESYPMEVKKTVKKS 158
>gi|6320259 ref|NP_010339.1| ubiquitin-conjugating enzyme, E2; Cdc34p
[Saccharomyces cerevisiae] >gi|136642|sp|P14682|UBC3_YEAST
UBIQUITIN-CONJUGATING ENZYME E2-34 KD (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN) (CELL DIVISION CONTROL PROTEIN 34)
>gi|101249|pir||A41241 ubiquitin-conjugating enzyme CDC34 - yeast
(Saccharomyces cerevisiae) >gi|173124|gb|AAA35188.1| (M21877)
ubiquitin-conjugating enzyme [Saccharomyces cerevisiae]
>gi|706820|emb|CAA58970.1| (X84162) ubiquitin conjugatin enzyme
[Saccharomyces cerevisiae] >gi|798905|emb|CAA89083.1| (Z49209)
Ubc3p [Saccharomyces cerevisiae] >gi|1431497|emb|CAA98872.1|
(Z74350) ORF YDR054c [Saccharomyces cerevisiae]
Length = 295
Frame 3 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | | | 295
0 50 100 150 200 250
Plus Strand HSPs:
Score = 383 (134.8 bits), Expect = 1.9e-34, P = 1.9e-34
Identities = 76/164 (46%), Positives = 110/164 (67%), Frame = +3
Query: 84 SQASLLLQKQLKDLC--KNPVDGFSAGLVDETNIFEWSVTI-IGPPDTLYEGGFFNAIMS 254
S AS LL +Q ++L K + F L D++NIF W++ + + D++Y GGFF A M
Sbjct: 6 STASSLLLRQYRELTDPKKAIPSFHIELEDDSNIFTWNIGVMVLNEDSIYHGGFFKAQMR 65
Query: 255 FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESI 434
FP ++P SPP +FT I+HPNVY DGR+CISILH G DP E +E W+PV TVES+
Sbjct: 66 FPEDFPFSPPQFRFTPAIYHPNVYRDGRLCISILHQSG-DPMTDEPDAETWSPVQTVESV 124
Query: 435 VLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQE 569
++SI+S+L PN SPANV+AA ++R + +K++V V +S++
Sbjct: 125 LISIVSLLEDPNINSPANVDAAVDYRKNPEQYKQRVKMEVERSKQ 169
>gi|136651|sp|P25869|UBC_ASFM2 UBIQUITIN-CONJUGATING ENZYME E2-21 KD
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|93027|pir||S19158 ubiquitin--protein ligase (EC 6.3.2.19) E2 -
African swine fever virus (isolate Malawi LIL20/1)
>gi|58650|emb|CAA44305.1| (X62440) ubiquitin conjugating enzyme
[African swine fever virus] >gi|450743|emb|CAA50851.1| (X71982)
ubiquitin conjugating enzyme [African swine fever virus]
Length = 213
Frame 3 hits (HSPs): _____________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 213
0 50 100 150 200
__________________
Annotated Domains:
Entrez binding site: UBIQUITIN (BY SIMILARITY). 85
Entrez Domain: ASP/GLU-RICH (BASIC). 183..213
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..157
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 3..156
PRODOM PD030861: UBC(2) 158..198
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 74..88
__________________
Plus Strand HSPs:
Score = 367 (129.2 bits), Expect = 9.6e-33, P = 9.6e-33
Identities = 72/157 (45%), Positives = 103/157 (65%), Frame = +3
Query: 93 SLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYP 272
S L + K+L NP + F V+E N+ EW V + GPPDTLYEGG F A + FP YP
Sbjct: 3 SSFLLAEYKNLIVNPSEHFKIS-VNEDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYP 61
Query: 273 NSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIIS 452
PP + FTSE+WHPN+Y DG++CISILH + G W+P +++++LS+IS
Sbjct: 62 YEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGMT-----WSPAQKIDTVLLSVIS 116
Query: 453 MLSSPNDESPANVEAAKEWRDR--RDDFKK---KVSRCVRKS 563
+L+ PN +SPANV+AAK +R ++D + +V + V+KS
Sbjct: 117 LLNEPNPDSPANVDAAKSYRKYLYKEDLESYPMEVKKTVKKS 158
>gi|1717855|sp|P52493|UBC2_NEUCR UBIQUITIN-CONJUGATING ENZYME E2-17 KD
(UBIQUITIN-PROTEIN LIGASE 2) (UBIQUITIN CARRIER PROTEIN)
>gi|7437985|pir||S71430 DNA repair protein mus-8 - Neurospora
crassa >gi|1100729|dbj|BAA11380.1| (D78372) mus-8 [Neurospora
crassa]
Length = 151
Frame 3 hits (HSPs): ________________________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | || 151
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 45..92
Entrez binding site: UBIQUITIN (BY SIMILARITY). 88
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..147
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 1..146
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 77..91
__________________
Plus Strand HSPs:
Score = 312 (109.8 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 65/156 (41%), Positives = 90/156 (57%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K + +P G SA V + N+ W+ IIGP DT +E G F +M F YPN P
Sbjct: 9 LMRDFKRMQTDPPAGVSASPVPD-NVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
PSVKF SE++HPNVY G +C+ IL RW+P + V +++ SI S+L+
Sbjct: 68 PSVKFISEMFHPNVYATGELCLDILQ-------------NRWSPTYDVAAVLTSIQSLLN 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQE 569
PN SPANVEA+ ++D R ++ K+V V KS E
Sbjct: 115 DPNTGSPANVEASNLYKDNRKEYHKRVRETVEKSWE 150
>gi|1816660|gb|AAB47850.1| (U86521) NhRAD6 [Nectria haematococca]
Length = 151
Frame 3 hits (HSPs): ________________________________________________
__________________________________________________
Database sequence: | | | || 151
0 50 100 150
Plus Strand HSPs:
Score = 309 (108.8 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 64/156 (41%), Positives = 89/156 (57%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K + +P G SA V + N+ W+ IIGP DT +E G F +M F YPN P
Sbjct: 9 LMRDFKRMQTDPPAGVSASPVPD-NVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P VKF SE++HPNVY G +C+ IL RW+P + V +++ SI S+L+
Sbjct: 68 PQVKFISEMFHPNVYATGELCLDILQ-------------NRWSPTYDVAAVLTSIQSLLN 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQE 569
PN SPANVEA+ ++D R ++ K+V V KS E
Sbjct: 115 DPNTGSPANVEASNLYKDNRKEYTKRVRETVEKSWE 150
>gi|6136093|sp|O74201|UBC2_CANAL UBIQUITIN-CONJUGATING ENZYME E2-20 KDA
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|3273562|gb|AAC24765.1| (AF036707) RAD6 [Candida albicans]
>gi|5565868|gb|AAD45241.1| (AF118145) RAD6 [Candida albicans]
Length = 179
Frame 3 hits (HSPs): ________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 179
0 50 100 150
__________________
Annotated Domains:
Entrez Domain: ACIDIC TAIL. 151..179
Entrez binding site: UBIQUITIN (BY SIMILARITY). 88
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..147
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 1..145
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 77..91
__________________
Plus Strand HSPs:
Score = 306 (107.7 bits), Expect = 2.8e-26, P = 2.8e-26
Identities = 63/154 (40%), Positives = 89/154 (57%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K + ++P G SA + + N+ +W+ IIGP DT +E G F ++SF YPN P
Sbjct: 9 LMRDFKRMQQDPPSGVSASPLPD-NVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P VKF SE++HPNVY G +C+ IL RW+P + V SI+ S+ S+L+
Sbjct: 68 PQVKFISEMFHPNVYASGELCLDILQ-------------NRWSPTYDVSSILTSVQSLLN 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
PN SPANVEAA ++D R + K+V V S
Sbjct: 115 DPNISSPANVEAANLYKDHRSLYVKRVRETVENS 148
>gi|6321380 ref|NP_011457.1| Ubiquitin conjugating (E2) enzyme. The C-terminal
23 residues are critical for sporulation and histone
polyubiquitinating activity, but not UV repair or induced
mutagenesis.; Rad6p [Saccharomyces cerevisiae]
>gi|136641|sp|P06104|UBC2_YEAST UBIQUITIN-CONJUGATING ENZYME E2-20
KD (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|83451|pir||A21906 ubiquitin-conjugating enzyme RAD6 - yeast
(Saccharomyces cerevisiae) >gi|172349|gb|AAA34952.1| (K02962) RAD6
protein [Saccharomyces cerevisiae] >gi|1322558|emb|CAA96761.1|
(Z72580) ORF YGL058w [Saccharomyces cerevisiae]
Length = 172
Frame 3 hits (HSPs): __________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
Plus Strand HSPs:
Score = 304 (107.0 bits), Expect = 4.5e-26, P = 4.5e-26
Identities = 64/156 (41%), Positives = 88/156 (56%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K + ++ G SA + + N+ W+ IIGP DT YE G F ++ F YPN P
Sbjct: 9 LMRDFKRMKEDAPPGVSASPLPD-NVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P VKF SE++HPNVY +G +C+ IL RWTP + V SI+ SI S+ +
Sbjct: 68 PHVKFLSEMFHPNVYANGEICLDILQ-------------NRWTPTYDVASILTSIQSLFN 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQE 569
PN SPANVEAA ++D + + K+V V KS E
Sbjct: 115 DPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150
>gi|3659954|pdb|1AYZ|A Chain A, Crystal Structure Of The Saccharomyces
Cerevisiae Ubiquitin-Conjugating Enzyme Rad6 (Ubc2) At 2.6a
Resolution >gi|3659955|pdb|1AYZ|B Chain B, Crystal Structure Of The
Saccharomyces Cerevisiae Ubiquitin-Conjugating Enzyme Rad6 (Ubc2)
At 2.6a Resolution >gi|3659956|pdb|1AYZ|C Chain C, Crystal
Structure Of The Saccharomyces Cerevisiae Ubiquitin-Conjugating
Enzyme Rad6 (Ubc2) At 2.6a Resolution
Length = 169
Frame 3 hits (HSPs): ___________________________________________
__________________________________________________
Database sequence: | | | | | 169
0 50 100 150
Plus Strand HSPs:
Score = 304 (107.0 bits), Expect = 4.5e-26, P = 4.5e-26
Identities = 64/156 (41%), Positives = 88/156 (56%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K + ++ G SA + + N+ W+ IIGP DT YE G F ++ F YPN P
Sbjct: 9 LMRDFKRMKEDAPPGVSASPLPD-NVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P VKF SE++HPNVY +G +C+ IL RWTP + V SI+ SI S+ +
Sbjct: 68 PHVKFLSEMFHPNVYANGEICLDILQ-------------NRWTPTYDVASILTSIQSLFN 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQE 569
PN SPANVEAA ++D + + K+V V KS E
Sbjct: 115 DPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150
>gi|7296802|gb|AAF52079.1| (AE003604) UbcD6 gene product [Drosophila
melanogaster]
Length = 151
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | || 151
0 50 100 150
Plus Strand HSPs:
Score = 301 (106.0 bits), Expect = 9.5e-26, P = 9.5e-26
Identities = 61/154 (39%), Positives = 89/154 (57%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K L ++P G S G + NI W+ I GP DT +E G F + F YPN P
Sbjct: 9 LMRDFKRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P+V+F S+++HPNVY DG +C+ IL RW+P + V +I+ SI S+LS
Sbjct: 68 PTVRFVSKVFHPNVYADGGICLDILQ-------------NRWSPTYDVSAILTSIQSLLS 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
PN SPAN AA+ +++ R +++K+V CV +S
Sbjct: 115 DPNPNSPANSTAAQLYKENRREYEKRVKACVEQS 148
>gi|136637|sp|P25153|UBC6_DROME UBIQUITIN-CONJUGATING ENZYME E2-17 KD
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|103350|pir||A39392 RAD6 DNA-repair homolog Dhr6 - fruit fly
(Drosophila melanogaster) >gi|156732|gb|AAA28308.1| (M63792) DHR6
[Drosophila melanogaster] >gi|156736|gb|AAA28309.1| (M64435) DHR6
[Drosophila melanogaster]
Length = 151
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | || 151
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 45..92
Entrez binding site: UBIQUITIN (BY SIMILARITY). 88
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..147
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 1..146
PROSITE G_BETA_REPEATS: Beta-transducin family T 24..38
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 77..91
__________________
Plus Strand HSPs:
Score = 298 (104.9 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 61/154 (39%), Positives = 89/154 (57%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K L ++P G S G + NI W+ I GP DT +E G F + F YPN P
Sbjct: 9 LMRDFKRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P+V+F S+++HPNVY DG +C+ IL RW+P + V +I+ SI S+LS
Sbjct: 68 PTVRFVSKVFHPNVYADGGICLDILQ-------------NRWSPRYDVSAILTSIQSLLS 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
PN SPAN AA+ +++ R +++K+V CV +S
Sbjct: 115 DPNPNSPANSTAAQLYKENRREYEKRVKACVEQS 148
>gi|4507771 ref|NP_003328.1| ubiquitin-conjugating enzyme E2B (RAD6 homolog)
[Homo sapiens] >gi|6678485 ref|NP_033484.1| ubiquitin-conjugating
enzyme E2B (RAD6 homology) [Mus musculus]
>gi|136638|sp|P23567|UBC2_HUMAN UBIQUITIN-CONJUGATING ENZYME E2-17
KDA (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (HR6B)
>gi|108017|pir||B41222 ubiquitin--protein ligase (EC 6.3.2.19) E2B
- human >gi|284677|pir||A42416 ubiquitin carrier protein E2 -
rabbit >gi|2143552|pir||I51913 14 kDa ubiquitin conjugating enzyme
- rat >gi|30954|emb|CAA37339.1| (X53251) E2 protein [Homo sapiens]
>gi|165780|gb|AAA31492.1| (M62387) ubiquitin conjugating-protein
[Oryctolagus cuniculus] >gi|184046|gb|AAA35982.1| (M74525) HHR6B
(Human homologue of yeast RAD 6); putative [Homo sapiens]
>gi|207555|gb|AAA21087.1| (M62388) ubiquitin conjugating-protein
[Rattus norvegicus] >gi|476117|gb|AAB60669.1| (U04308) 14 kDa
ubiquitin conjugating enzyme [Rattus norvegicus]
>gi|1237240|emb|CAA65602.1| (X96859) ubiquitin-conjugating enzym
[Mus musculus] >gi|1373353|gb|AAC52884.1| (U57690) E214K [Mus
musculus] >gi|5019992|gb|AAD37966.1|AF144083_1 (AF144083)
ubiquitin-conjugating enzyme [Rattus norvegicus]
>gi|11037550|gb|AAG27628.1| (AF294392) ubiquitin-conjugating enzyme
HR6B [Homo sapiens] >gi|745378|prf||2016220A ubiquitin-conjugating
enzyme:ISOTYPE=E2-14k [Rattus norvegicus]
Length = 152
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | || 152
0 50 100 150
Plus Strand HSPs:
Score = 296 (104.2 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 60/154 (38%), Positives = 90/154 (58%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K L ++P G S G E NI +W+ I GP T +E G F ++ F YPN P
Sbjct: 9 LMRDFKRLQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P+V+F S+++HPNVY DG +C+ IL RW+P + V SI+ SI S+L
Sbjct: 68 PTVRFLSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLD 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
PN SPAN +AA+ +++ + +++K+VS V +S
Sbjct: 115 EPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
>gi|11417349 ref|XP_004044.1| ubiquitin-conjugating enzyme E2B (RAD6 homolog)
[Homo sapiens]
Length = 152
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | || 152
0 50 100 150
Plus Strand HSPs:
Score = 295 (103.8 bits), Expect = 4.1e-25, P = 4.1e-25
Identities = 60/154 (38%), Positives = 90/154 (58%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K L ++P G S G E NI +W+ I GP T +E G F ++ F YPN P
Sbjct: 9 LMRDFKRLQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEEGTFKLVIEFSEEYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P+V+F S+++HPNVY DG +C+ IL RW+P + V SI+ SI S+L
Sbjct: 68 PTVRFLSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLD 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
PN SPAN +AA+ +++ + +++K+VS V +S
Sbjct: 115 EPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
>gi|1174845|sp|P23566|UBC2_SCHPO UBIQUITIN-CONJUGATING ENZYME E2-17 KD
(UBIQUITIN-PROTEIN LIGASE 2) (UBIQUITIN CARRIER PROTEIN)
>gi|101070|pir||S12529 ubiquitin-conjugating enzyme rhp6 - fission
yeast (Schizosaccharomyces pombe) >gi|929893|emb|CAA90592.1|
(Z50728) ubiquitin-conjugating enzyme e2-17 kd [Schizosaccharomyces
pombe]
Length = 151
Frame 3 hits (HSPs): ________________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | || 151
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 45..92
DOMO DM00225: UBIQUITIN-CONJUGATINGENZYMES 2..149
Entrez binding site: UBIQUITIN (BY SIMILARITY). 88
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..147
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 1..145
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 77..91
__________________
Plus Strand HSPs:
Score = 294 (103.5 bits), Expect = 5.2e-25, P = 5.2e-25
Identities = 61/156 (39%), Positives = 91/156 (58%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K + ++P G SA V + N+ W+ IIGP DT +E G F ++SF YPN P
Sbjct: 9 LMRDFKRMQQDPPAGVSASPVSD-NVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P VKF S ++HPNVY +G +C+ IL RW+P + V +I+ SI S+L+
Sbjct: 68 PLVKFVSTMFHPNVYANGELCLDILQ-------------NRWSPTYDVAAILTSIQSLLN 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQE 569
PN+ SPAN EAA+ R+ + ++ ++V + V S E
Sbjct: 115 DPNNASPANAEAAQLHRENKKEYVRRVRKTVEDSWE 150
>gi|9989034|gb|AAG10797.1|AC022284_2 (AC022284) Ubiquitin-conjugating enzyme
[Leishmania major] >gi|11022580|emb|CAC14238.1| (AL445678) probable
ubiquitin-conjugating enzyme e2-17 kda [Leishmania major]
Length = 148
Frame 3 hits (HSPs): ________________________________________________
__________________________________________________
Database sequence: | | | | 148
0 50 100
Plus Strand HSPs:
Score = 293 (103.1 bits), Expect = 6.7e-25, P = 6.7e-25
Identities = 56/153 (36%), Positives = 92/153 (60%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
+QK+LKDL K+P S G V E+++F W TIIGP D+ Y GG F + FPS+YP P
Sbjct: 6 IQKELKDLEKDPPANTSGGPVSESDLFNWKATIIGPEDSPYAGGLFFLNIHFPSDYPFKP 65
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P ++FT++I+HPN+ +G +C+ IL ++W+P T+ ++LS+ S+L+
Sbjct: 66 PKLQFTTKIYHPNINNNGGICLDIL-------------KDQWSPALTISKVLLSVCSLLT 112
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRK 560
PN + P + A++++ R+ F K + R+
Sbjct: 113 DPNPDDPLVPDIARQYKTDRNAFNKTAAEWTRQ 145
>gi|9790041 ref|NP_062642.1| ubiquitin-conjugating enzyme HR6A [Mus musculus]
>gi|3769549|gb|AAC64563.1| (AF089812) ubiquitin-conjugating enzyme
HR6A [Mus musculus] >gi|4883773|gb|AAD31646.1| (AF120212)
ubiquitin-conjugating enzyme [Gallus gallus]
Length = 152
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | || 152
0 50 100 150
Plus Strand HSPs:
Score = 290 (102.1 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 60/154 (38%), Positives = 88/154 (57%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K L ++P G S G E NI W+ I GP T +E G F + F YPN P
Sbjct: 9 LMRDFKRLQEDPPAGVS-GAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P+V+F S+++HPNVY DG +C+ IL RW+P + V SI+ SI S+L
Sbjct: 68 PTVRFVSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLD 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
PN SPAN +AA+ +++ + +++K+VS V +S
Sbjct: 115 EPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
>gi|11272418|pir||T45220 ubiquitin--protein ligase (EC 6.3.2.19) rhp6
[imported] - fission yeast (Schizosaccharomyces pombe)
>gi|5046|emb|CAA37340.1| (X53252) rhp6+ [Schizosaccharomyces pombe]
Length = 151
Frame 3 hits (HSPs): ________________________________________________
__________________________________________________
Database sequence: | | | || 151
0 50 100 150
Plus Strand HSPs:
Score = 289 (101.7 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 60/156 (38%), Positives = 90/156 (57%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K + ++P G SA V + N+ W+ IIGP DT +E G F ++SF YPN P
Sbjct: 9 LMRDFKRMQQDPPAGVSASPVSD-NVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P VKF S ++HPNVY +G +C+ IL RW+P + V +I+ SI +L+
Sbjct: 68 PLVKFVSTMFHPNVYANGELCLDILQ-------------NRWSPTYDVAAILTSIQRLLN 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQE 569
PN+ SPAN EAA+ R+ + ++ ++V + V S E
Sbjct: 115 DPNNASPANAEAAQLHRENKKEYVRRVRKTVEDSWE 150
>gi|106346|pir||S17516 hypothetical protein - human
Length = 151
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: ______
__________________________________________________
Database sequence: | | | || 151
0 50 100 150
__________________
Annotated Domains:
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 76..90
__________________
Plus Strand HSPs:
Score = 289 (101.7 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 59/154 (38%), Positives = 90/154 (58%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K L ++P +G E NI +W+ IIGP T +E G F ++ F YPN P
Sbjct: 9 LMRDFKRLQEDPP--CVSGAPSENNIMQWNAVIIGPEGTPFEDGTFRLVIEFSEEYPNKP 66
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P+V+F S+++HPNVY DG +C+ IL RW+P + V SI+ SI S+L
Sbjct: 67 PTVRFLSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLD 113
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
PN SPAN +AA+ +++ + +++K+VS V +S
Sbjct: 114 EPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 147
>gi|136640|sp|P25866|UBC2_WHEAT UBIQUITIN-CONJUGATING ENZYME E2-17 KD
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|170785|gb|AAA34310.1| (M62720) ubiquitin carrier protein
[Triticum aestivum]
Length = 152
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | || 152
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 45..92
Entrez binding site: UBIQUITIN. 88
Entrez mutagenized site: C->S: LOSS OF ACTIVITY 88
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..147
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 1..146
PROSITE G_BETA_REPEATS: Beta-transducin family T 24..38
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 77..91
__________________
Plus Strand HSPs:
Score = 286 (100.7 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 57/154 (37%), Positives = 88/154 (57%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K L ++P G S G + NI W+ I GP DT ++GG F + F +YPN P
Sbjct: 9 LMRDFKRLQQDPPAGIS-GAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P+V+F S ++HPN+Y DG +C+ IL +W+P++ V +I+ SI S+L
Sbjct: 68 PTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLC 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
PN SPAN EAA+ + + + ++ +KV V +S
Sbjct: 115 DPNPNSPANSEAARMYSENKREYNRKVREVVEQS 148
>gi|1174846|sp|P42746|UBC3_ARATH UBIQUITIN-CONJUGATING ENZYME E2-17 KD 3
(UBIQUITIN-PROTEIN LIGASE 3) (UBIQUITIN CARRIER PROTEIN 3)
>gi|1076425|pir||S43782 ubiquitin-conjugating enzyme UBC3 -
Arabidopsis thaliana >gi|431262|gb|AAA32898.1| (L19352) ubiquitin
conjugating enzyme [Arabidopsis thaliana]
>gi|10178085|dbj|BAB11504.1| (AB015469) ubiquitin-conjugating
enzyme E2-17 kd 3 (ubiquitin-protein ligase 3) (ubiquitin carrier
protein 3)-like protein [Arabidopsis thaliana]
Length = 150
Frame 3 hits (HSPs): ________________________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | 150
0 50 100
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 45..92
Entrez binding site: UBIQUITIN (BY SIMILARITY). 88
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..147
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 1..146
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 77..91
__________________
Plus Strand HSPs:
Score = 285 (100.3 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 57/154 (37%), Positives = 87/154 (56%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L K L K+P G S G + NI W+ I GP DT ++GG F + F +YPN P
Sbjct: 9 LMWDFKRLQKDPPVGIS-GAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P V+F S ++HPN+Y DG +C+ IL +W+P++ V +++ SI S+L
Sbjct: 68 PIVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAVLTSIQSLLC 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
PN +SPAN EAA+ + + + ++ +KV V +S
Sbjct: 115 DPNPDSPANAEAARLFSENKREYNRKVIEIVEQS 148
>gi|1717853|sp|P52478|UBC1_CAEEL UBIQUITIN-CONJUGATING ENZYME E2-21.5 KD
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|506644|gb|AAA83388.1| (U08139) similar to yeast RAD6 DNA repair
protein, Swiss-Prot Accession Number P06104 [Caenorhabditis
elegans]
Length = 192
Frame 3 hits (HSPs): _____________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 192
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 45..92
DOMO DM00225: UBIQUITIN-CONJUGATINGENZYMES 2..149
Entrez binding site: UBIQUITIN (BY SIMILARITY). 88
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..147
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 1..146
PRODOM PD030864: O45062(1) UBC1(1) 148..191
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 77..91
__________________
Plus Strand HSPs:
Score = 285 (100.3 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 60/154 (38%), Positives = 87/154 (56%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K L ++P G S G E NI W I GP +T +E G F + F YPN P
Sbjct: 9 LMRDFKKLQEDPPAGVS-GAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P+VKF S+++HPNVY DG +C+ IL RW+P + V +I+ SI S+L
Sbjct: 68 PTVKFISKMFHPNVYADGSICLDILQ-------------NRWSPTYDVAAILTSIQSLLD 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
PN SPAN AA+ +++ R +++K+V + V +S
Sbjct: 115 EPNPNSPANSLAAQLYQENRREYEKRVQQIVEQS 148
>gi|8118527|gb|AAF73016.1|AF262934_1 (AF262934) ubiquitin conjugating protein
[Avicennia marina]
Length = 152
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | || 152
0 50 100 150
Plus Strand HSPs:
Score = 284 (100.0 bits), Expect = 6.0e-24, P = 6.0e-24
Identities = 55/154 (35%), Positives = 88/154 (57%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K L ++P G S G + NI W+ I GP DT ++GG F + F +YPN P
Sbjct: 9 LMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P+V+F S ++HPN+Y DG +C+ IL +W+P++ + +I+ SI S+L
Sbjct: 68 PTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDIAAILTSIQSLLC 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
PN SPAN EAA+ + + + ++ ++V V +S
Sbjct: 115 DPNPNSPANSEAARMFSENKREYNRRVREIVEQS 148
>gi|4507769 ref|NP_003327.1| ubiquitin-conjugating enzyme E2A (RAD6 homolog)
[Homo sapiens] >gi|1351346|sp|P49459|UBCA_HUMAN
UBIQUITIN-CONJUGATING ENZYME E2-17 KDA (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN) (HR6A) >gi|108016|pir||A41222
ubiquitin--protein ligase (EC 6.3.2.19) E2A - human
>gi|184044|gb|AAA35981.1| (M74524) HHR6A (Human homologue of yeast
RAD 6); putative [Homo sapiens] >gi|11036948|gb|AAG27430.1|
(AF294366) ubiquitin-conjugating enzyme HR6A [Homo sapiens]
Length = 152
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | || 152
0 50 100 150
Plus Strand HSPs:
Score = 283 (99.6 bits), Expect = 7.6e-24, P = 7.6e-24
Identities = 59/154 (38%), Positives = 87/154 (56%), Frame = +3
Query: 102 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 281
L + K L ++P G S G E NI W+ I GP T + G F + F YPN P
Sbjct: 9 LMRDFKRLQEDPPAGVS-GAPSENNIMVWNAVIFGPEGTPFGDGTFKLTIEFTEEYPNKP 67
Query: 282 PSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLS 461
P+V+F S+++HPNVY DG +C+ IL RW+P + V SI+ SI S+L
Sbjct: 68 PTVRFVSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLD 114
Query: 462 SPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKS 563
PN SPAN +AA+ +++ + +++K+VS V +S
Sbjct: 115 EPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
WARNING: HSPs involving 290 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.96
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.321 0.136 0.428
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.359 0.159 0.608
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.344 0.149 0.484
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.356 0.158 0.598
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.337 0.149 0.497
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.341 0.149 0.458
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 203 202 10. 77 3 12 22 0.095 35
31 0.11 38
+2 0 203 202 10. 77 3 12 22 0.095 35
31 0.11 38
+1 0 204 203 10. 77 3 12 22 0.095 35
31 0.11 38
-1 0 204 204 10. 77 3 12 22 0.096 35
31 0.11 38
-2 0 203 202 10. 77 3 12 22 0.095 35
31 0.11 38
-3 0 203 202 10. 77 3 12 22 0.095 35
31 0.11 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 340
No. of states in DFA: 593 (58 KB)
Total size of DFA: 227 KB (256 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 212.63u 0.89s 213.52t Elapsed: 00:00:56
Total cpu time: 212.69u 0.92s 213.61t Elapsed: 00:00:57
Start: Wed Jan 16 10:38:19 2002 End: Wed Jan 16 10:39:16 2002
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000