R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 281 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|7437989|pir||T01329 ubiquitin-conjugating enzyme E2 - maize
>gi|2641619|gb|AAC12662.1| (AF032468) ubiquitin-conjugating enzyme
protein E2 [Zea mays]
Length = 169
Frame 2 hits (HSPs): ____
Frame 1 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | 169
0 50 100 150
Plus Strand HSPs:
Score = 510 (179.5 bits), Expect = 2.1e-50, Sum P(2) = 2.1e-50
Identities = 92/108 (85%), Positives = 101/108 (93%), Frame = +1
Query: 145 AASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSF 324
+ASQASLLLQKQLKDL KNPVDGFSAGLVD++NIFEW VTIIGPPDTLY+GG+FNAIM+F
Sbjct: 4 SASQASLLLQKQLKDLAKNPVDGFSAGLVDDSNIFEWQVTIIGPPDTLYDGGYFNAIMTF 63
Query: 325 PSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
P NYPNSPPSV+FTS +WHPNVYPDGRVCISIL P EDPNGY+LASE
Sbjct: 64 PQNYPNSPPSVRFTSEMWHPNVYPDGRVCISILHPPGEDPNGYELASE 111
Score = 41 (14.4 bits), Expect = 2.1e-50, Sum P(2) = 2.1e-50
Identities = 7/10 (70%), Positives = 7/10 (70%), Frame = +2
Query: 458 LRVSRWTPVH 487
L RWTPVH
Sbjct: 108 LASERWTPVH 117
>gi|2129758|pir||S71209 ubiquitin--protein ligase (EC 6.3.2.19) UBC7
[similarity] - Arabidopsis thaliana >gi|992704|gb|AAC49321.1|
(U33757) UBC7 [Arabidopsis thaliana] >gi|9759251|dbj|BAB09775.1|
(AB016890) ubiquitin-conjugating enzyme UBC7 [Arabidopsis thaliana]
Length = 166
Frame 2 hits (HSPs): ____
Frame 1 hits (HSPs): _________________________________
Annotated Domains: _____
__________________________________________________
Database sequence: | | | | | 166
0 50 100 150
__________________
Annotated Domains:
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 78..92
__________________
Plus Strand HSPs:
Score = 505 (177.8 bits), Expect = 6.9e-50, Sum P(2) = 6.9e-50
Identities = 92/107 (85%), Positives = 100/107 (93%), Frame = +1
Query: 148 ASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFP 327
ASQASLLLQKQLKDLCK+PVDGFSAGLVDE NIFEWSVTIIGPPDTLYEGGFFNAIM+FP
Sbjct: 2 ASQASLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFP 61
Query: 328 SNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
NYPNSPP+V+FTS +WHPNVY DGRVCISIL P +DP+GY+LASE
Sbjct: 62 QNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASE 108
Score = 41 (14.4 bits), Expect = 6.9e-50, Sum P(2) = 6.9e-50
Identities = 7/10 (70%), Positives = 7/10 (70%), Frame = +2
Query: 458 LRVSRWTPVH 487
L RWTPVH
Sbjct: 105 LASERWTPVH 114
>gi|11272414|pir||T45703 ubiquitin--protein ligase (EC 6.3.2.19) UBC13
[similarity] - Arabidopsis thaliana >gi|992706|gb|AAC49322.1|
(U33758) UBC13 [Arabidopsis thaliana] >gi|6522625|emb|CAB62037.1|
(AL133298) ubiquitin conjugating enzyme E2 (UBC13) [Arabidopsis
thaliana]
Length = 166
Frame 2 hits (HSPs): ____
Frame 1 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | 166
0 50 100 150
Plus Strand HSPs:
Score = 502 (176.7 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 92/106 (86%), Positives = 98/106 (92%), Frame = +1
Query: 151 SQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPS 330
SQA LLLQKQLKDLCK+PVDGFSAGLVDE NIFEWSVTIIGPPDTLYEGGFF AIMSFP
Sbjct: 3 SQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQ 62
Query: 331 NYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
NYPNSPP+V+FTS IWHPNVYPDGRVCISIL P +DP+GY+LASE
Sbjct: 63 NYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASE 108
Score = 41 (14.4 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 7/10 (70%), Positives = 7/10 (70%), Frame = +2
Query: 458 LRVSRWTPVH 487
L RWTPVH
Sbjct: 105 LASERWTPVH 114
>gi|7437988|pir||T02943 ubiquitin-conjugating enzyme - maize
>gi|2624417|emb|CAA05772.1| (AJ002959) Ubiquitin carrier protein
[Zea mays]
Length = 169
Frame 2 hits (HSPs): ____
Frame 1 hits (HSPs): ________________________________
__________________________________________________
Database sequence: | | | | | 169
0 50 100 150
Plus Strand HSPs:
Score = 496 (174.6 bits), Expect = 6.1e-49, Sum P(2) = 6.1e-49
Identities = 88/106 (83%), Positives = 99/106 (93%), Frame = +1
Query: 151 SQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPS 330
+QASLLLQKQL+DL K+PVDGFSAGLVD++N+FEW VTIIGPPDTLY+GG+FNAIMSFP
Sbjct: 6 TQASLLLQKQLRDLAKHPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQ 65
Query: 331 NYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
NYPNSPPSV+FTS +WHPNVYPDGRVCISIL P EDPNGY+LASE
Sbjct: 66 NYPNSPPSVRFTSEMWHPNVYPDGRVCISILHPPGEDPNGYELASE 111
Score = 41 (14.4 bits), Expect = 6.1e-49, Sum P(2) = 6.1e-49
Identities = 7/10 (70%), Positives = 7/10 (70%), Frame = +2
Query: 458 LRVSRWTPVH 487
L RWTPVH
Sbjct: 108 LASERWTPVH 117
>gi|1174852|sp|P42747|UBC7_ARATH UBIQUITIN-CONJUGATING ENZYME E2-19 KD
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (TAYO29)
>gi|2129757|pir||S46656 ubiquitin--protein ligase (EC 6.3.2.19)
UBC14 [similarity] - Arabidopsis thaliana
>gi|600389|emb|CAA51200.1| (X72625) ubiquitin conjugating enzyme E2
[Arabidopsis thaliana] >gi|992708|gb|AAC49323.1| (U33759) UBC14
[Arabidopsis thaliana] >gi|7076781|emb|CAB75896.1| (AL132975)
ubiquitin-conjugating enzyme UBC3 [Arabidopsis thaliana]
Length = 167
Frame 2 hits (HSPs): ____
Frame 1 hits (HSPs): _________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 167
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 47..94
DOMO DM00225: UBIQUITIN-CONJUGATINGENZYMES 3..164
Entrez binding site: UBIQUITIN (BY SIMILARITY). 90
PFAM UQ_con: Ubiquitin-conjugating enzyme 2..162
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 4..161
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 79..93
__________________
Plus Strand HSPs:
Score = 481 (169.3 bits), Expect = 2.3e-47, Sum P(2) = 2.3e-47
Identities = 87/109 (79%), Positives = 98/109 (89%), Frame = +1
Query: 142 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 321
MA +QASLLLQKQLKDLCK PVDGFSAGLVDE N+F+WSV+I+GPPDTLYEGGFFNAIMS
Sbjct: 1 MANNQASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMS 60
Query: 322 FPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
FP NYP SPP+V FTS +WHPNVY DG+VCISIL P +DP+GY+LASE
Sbjct: 61 FPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASE 109
Score = 41 (14.4 bits), Expect = 2.3e-47, Sum P(2) = 2.3e-47
Identities = 7/10 (70%), Positives = 7/10 (70%), Frame = +2
Query: 458 LRVSRWTPVH 487
L RWTPVH
Sbjct: 106 LASERWTPVH 115
>gi|136647|sp|P25868|UBC7_WHEAT UBIQUITIN-CONJUGATING ENZYME E2-20 KD
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|100813|pir||A41547 ubiquitin-conjugating enzyme E2 - wheat
Length = 168
Frame 2 hits (HSPs): ______ ____
Frame 1 hits (HSPs): ___________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 168
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 49..96
DOMO DM00225: UBIQUITIN-CONJUGATINGENZYMES 5..165
Entrez binding site: UBIQUITIN (BY SIMILARITY). 92
PFAM UQ_con: Ubiquitin-conjugating enzyme 4..163
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 1..162
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 81..95
__________________
Plus Strand HSPs:
Score = 382 (134.5 bits), Expect = 3.7e-40, Sum P(3) = 3.7e-40
Identities = 66/89 (74%), Positives = 77/89 (86%), Frame = +1
Query: 202 PVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPSVKFTSXIWH 381
P GF G VD++N+FEW VTIIGPP+TLY+GG+FNAIMSFP NYPNSPP+V+FTS +WH
Sbjct: 23 PSMGFQLGFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWH 82
Query: 382 PNVYPDGRVCISILXPXXEDPNGYQLASE 468
PNVYPDGRVCISI P +DPNGY+LASE
Sbjct: 83 PNVYPDGRVCISI-HPPGDDPNGYELASE 110
Score = 41 (14.4 bits), Expect = 3.7e-40, Sum P(3) = 3.7e-40
Identities = 7/10 (70%), Positives = 7/10 (70%), Frame = +2
Query: 458 LRVSRWTPVH 487
L RWTPVH
Sbjct: 107 LASERWTPVH 116
Score = 41 (14.4 bits), Expect = 3.7e-40, Sum P(3) = 3.7e-40
Identities = 10/18 (55%), Positives = 13/18 (72%), Frame = +2
Query: 155 RQAFSFKSSSKIFAKTPS 208
R+A S +SSS+I TPS
Sbjct: 7 RRASSSRSSSEISRTTPS 24
>gi|7493141|pir||T39286 probable ubiquitin--protein ligase (EC 6.3.2.19) e2 -
fission yeast (Schizosaccharomyces pombe)
>gi|5531471|emb|CAB50972.1| (AL096851) probable
ubiquitin-conjugating enzyme e2 (EC 6.3.2.19) [Schizosaccharomyces
pombe]
Length = 167
Frame 1 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | 167
0 50 100 150
Plus Strand HSPs:
Score = 368 (129.5 bits), Expect = 7.5e-33, P = 7.5e-33
Identities = 67/109 (61%), Positives = 83/109 (76%), Frame = +1
Query: 142 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 321
M +S + LL+KQLK++ KNP GFS GLVD+ +IFEW V IIGP DTLYEGGFF+A +S
Sbjct: 1 MPSSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLS 60
Query: 322 FPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
FP +YP PP +KFT+ IWHPNV+P+G VCISIL P +D GY+ A E
Sbjct: 61 FPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGE 109
>gi|464984|sp|P34477|UBC7_CAEEL PROBABLE UBIQUITIN-CONJUGATING ENZYME E2-19 KD
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|482189|pir||S40982 hypothetical protein F58A4.10 -
Caenorhabditis elegans >gi|3877825|emb|CAA80166.1| (Z22179) similar
to ubiquitin conjugating enzymes, contains similarity to Pfam
domain: PF00179 (Ubiquitin-conjugating enzyme), Score=348.0,
E-value=3.3e-101, N=1~cDNA EST yk381a9.3 comes from this gene~cDNA
EST yk486g12.5 comes from this gene~cDNA EST >
Length = 164
Frame 1 hits (HSPs): _________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 164
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 45..92
DOMO DM00225: UBIQUITIN-CONJUGATINGENZYMES 1..162
Entrez binding site: UBIQUITIN (BY SIMILARITY). 88
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..160
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 5..159
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 77..91
__________________
Plus Strand HSPs:
Score = 352 (123.9 bits), Expect = 3.7e-31, P = 3.7e-31
Identities = 63/105 (60%), Positives = 79/105 (75%), Frame = +1
Query: 154 QASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSN 333
Q+SLLL+KQL D+ + PVDGFSAGLVD+ +I++W V +IGPPDTLYEGGFF AI+ FP +
Sbjct: 3 QSSLLLKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRD 62
Query: 334 YPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
YP PP +KF S IWHPN+ +G VCISIL +D GY+ E
Sbjct: 63 YPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEE 107
>gi|7299803|gb|AAF54982.1| (AE003701) CG9602 gene product [Drosophila
melanogaster]
Length = 168
Frame 1 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | 168
0 50 100 150
Plus Strand HSPs:
Score = 336 (118.3 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 63/109 (57%), Positives = 79/109 (72%), Frame = +1
Query: 142 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 321
M+ QASLLL +QL +L ++PV+GFSAGLV +++IF+W V IIGPPDTLYEGGFF A +
Sbjct: 1 MSELQASLLLNRQLSELQRHPVEGFSAGLVSDSDIFKWEVVIIGPPDTLYEGGFFKAHLI 60
Query: 322 FPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
FP YP PP +KF + IWHPN+ G VCISIL +D GY+ A E
Sbjct: 61 FPKEYPLRPPKMKFITEIWHPNIDKAGDVCISILHEPGDDKWGYEKAEE 109
>gi|3024775|sp|Q99462|UBCG_HUMAN UBIQUITIN-CONJUGATING ENZYME E2 G1
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|1741957|dbj|BAA11410.1| (D78514) ubiquitin-conjugating enzyme
[Homo sapiens] >gi|3818632|gb|AAC69605.1| (AF099093)
ubiquitin-conjugating enzyme UBC7 [Rattus norvegicus]
Length = 170
Frame 1 hits (HSPs): ________________________________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | 170
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 47..94
Entrez binding site: UBIQUITIN (BY SIMILARITY). 90
PFAM UQ_con: Ubiquitin-conjugating enzyme 2..163
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 10..162
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 79..93
__________________
Plus Strand HSPs:
Score = 335 (117.9 bits), Expect = 2.4e-29, P = 2.4e-29
Identities = 61/109 (55%), Positives = 79/109 (72%), Frame = +1
Query: 142 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 321
M Q++LLL++QL +L KNPV+GFSAGL+D+ +++ W V IIGPPDTLYEGG F A ++
Sbjct: 1 MTELQSALLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLT 60
Query: 322 FPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
FP +YP PP +KF + IWHPNV +G VCISIL ED GY+ E
Sbjct: 61 FPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEE 109
>gi|7294260|gb|AAF49611.1| (AE003530) CG7656 gene product [Drosophila
melanogaster]
Length = 341
Frame 1 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | 341
0 150 300
Plus Strand HSPs:
Score = 315 (110.9 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 58/120 (48%), Positives = 79/120 (65%), Frame = +1
Query: 109 SSLRSSTCLPFMAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTL 288
SS + T P +A +A L + K L + PV+GF L+++ N+FEW V I GPPDTL
Sbjct: 50 SSAAAPTTTPSSSAVRA---LAMEYKSLQEEPVEGFRVKLINDDNLFEWEVAIFGPPDTL 106
Query: 289 YEGGFFNAIMSFPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
Y+GG+F A M FP +YP SPPS++F + +WHPNVY +G +CISIL P +DP +L E
Sbjct: 107 YQGGYFKAHMKFPHDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCE 166
>gi|1381181|gb|AAB02656.1| (U58652) ubiquitin-conjugating enzyme E2-32k
[Oryctolagus cuniculus]
Length = 250
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | 250
0 50 100 150 200
Plus Strand HSPs:
Score = 312 (109.8 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 56/109 (51%), Positives = 78/109 (71%), Frame = +1
Query: 142 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 321
M +SQ +L+L+ LK L + PV+GF LVDE++++ W V I GPP+TLYEGG+F A +
Sbjct: 18 MTSSQKALMLE--LKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIK 75
Query: 322 FPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
FP +YP SPP+ +F + +WHPN+Y +G VCISIL P +DP +L SE
Sbjct: 76 FPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSE 124
>gi|11526508 ref|XP_005546.1| hypothetical protein FLJ20419 [Homo sapiens]
>gi|2501429|sp|Q29503|UBC3_RABIT UBIQUITIN-CONJUGATING ENZYME E2-32
KD COMPLEMENTING (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER
PROTEIN) (E2-CDC34)
Length = 238
Frame 1 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | | 238
0 50 100 150 200
Plus Strand HSPs:
Score = 312 (109.8 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 56/109 (51%), Positives = 78/109 (71%), Frame = +1
Query: 142 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 321
M +SQ +L+L+ LK L + PV+GF LVDE++++ W V I GPP+TLYEGG+F A +
Sbjct: 6 MTSSQKALMLE--LKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIK 63
Query: 322 FPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
FP +YP SPP+ +F + +WHPN+Y +G VCISIL P +DP +L SE
Sbjct: 64 FPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSE 112
>gi|8923388 ref|NP_060281.1| hypothetical protein FLJ20419 [Homo sapiens]
>gi|7020506|dbj|BAA91156.1| (AK000426) unnamed protein product
[Homo sapiens]
Length = 238
Frame 1 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | | 238
0 50 100 150 200
Plus Strand HSPs:
Score = 308 (108.4 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 56/109 (51%), Positives = 77/109 (70%), Frame = +1
Query: 142 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 321
M +SQ +L+L+ LK L + PV+GF LVDE+++ W V I GPP+TLYEGG+F A +
Sbjct: 6 MTSSQKALMLE--LKSLQEEPVEGFRITLVDESDLHNWEVAIFGPPNTLYEGGYFKAHIK 63
Query: 322 FPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
FP +YP SPP+ +F + +WHPN+Y +G VCISIL P +DP +L SE
Sbjct: 64 FPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSE 112
>gi|2136341|pir||A49630 ubiquitin conjugating enzyme - human (fragment)
>gi|388309|gb|AAC37534.1| (L22005) ubiquitin conjugating enzyme
[Homo sapiens]
Length = 298
Frame 1 hits (HSPs): ____________________
Annotated Domains: ____
__________________________________________________
Database sequence: | | | | | | | 298
0 50 100 150 200 250
__________________
Annotated Domains:
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 144..158
__________________
Plus Strand HSPs:
Score = 307 (108.1 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 56/111 (50%), Positives = 76/111 (68%), Frame = +1
Query: 136 PFMAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAI 315
P + +SQ +LLL+ LK L + PV+GF LVDE +++ W V I GPP+T YEGG+F A
Sbjct: 66 PLVPSSQKALLLE--LKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKAR 123
Query: 316 MSFPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
+ FP +YP SPP+ +F + +WHPN+Y G VCISIL P +DP +L SE
Sbjct: 124 LKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSE 174
>gi|2507505|sp|P49427|UBC3_HUMAN UBIQUITIN-CONJUGATING ENZYME E2-32 KDA
COMPLEMENTING (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER
PROTEIN) (E2-CDC34)
Length = 236
Frame 1 hits (HSPs): ________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 236
0 50 100 150 200
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 50..97
Entrez binding site: UBIQUITIN (BY SIMILARITY). 93
Entrez Domain: ASP/GLU-RICH (ACIDIC). 200..236
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..171
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 1..161
PRODOM PD030860: UBC3(2) 164..202
PRODOM PD073756: UBC3_HUMAN 204..235
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 82..96
__________________
Plus Strand HSPs:
Score = 307 (108.1 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 56/111 (50%), Positives = 76/111 (68%), Frame = +1
Query: 136 PFMAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAI 315
P + +SQ +LLL+ LK L + PV+GF LVDE +++ W V I GPP+T YEGG+F A
Sbjct: 4 PLVPSSQKALLLE--LKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKAR 61
Query: 316 MSFPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
+ FP +YP SPP+ +F + +WHPN+Y G VCISIL P +DP +L SE
Sbjct: 62 LKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSE 112
>gi|3347990|gb|AAC27763.1| (AF076597) ubiquitin-conjugating enzyme protein UbcC
[Dictyostelium discoideum]
Length = 235
Frame 1 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | | 235
0 50 100 150 200
Plus Strand HSPs:
Score = 298 (104.9 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 57/104 (54%), Positives = 68/104 (65%), Frame = +1
Query: 157 ASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNY 336
AS LLQ Q K + P++G + LVDE N+FEW I GPP+T YEGG F M FP++Y
Sbjct: 3 ASKLLQNQFKKISSEPIEGVAFDLVDE-NLFEWRAYIEGPPETDYEGGIFQIQMKFPNDY 61
Query: 337 PNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
P SPP + F S WHPNVYPDG+VCISIL P ED +L E
Sbjct: 62 PMSPPVLIFQSEFWHPNVYPDGKVCISILHPPGEDETSGELPEE 105
>gi|12742652 ref|XP_009804.2| ubiquitin-conjugating enzyme E2G 2 (homologous to
yeast UBC7) [Homo sapiens] >gi|9988064|sp|P56554|UBCJ_HUMAN
UBIQUITIN-CONJUGATING ENZYME E2 G2 (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN) >gi|7717436|emb|CAB90551.1| (AL163300)
human ubiquitin conjugating enzyme G2 EC 6.3.2.19. [Homo sapiens]
Length = 165
Frame 1 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | 165
0 50 100 150
Plus Strand HSPs:
Score = 290 (102.1 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 54/107 (50%), Positives = 71/107 (66%), Frame = +1
Query: 148 ASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFP 327
A A L + K L NP +G AG ++E N FEW I+GP DT +E G F AI+SFP
Sbjct: 2 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFP 61
Query: 328 SNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
+YP SPP ++FT ++HPN+YPDGRVCISIL +DP GY+ ++E
Sbjct: 62 LDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAE 108
>gi|9790275 ref|NP_062777.1| ubiquitin-conjugating enzyme E2G 2;
ubiquitin-conjugating enzyme E2G 2 (homologous to yeast UBC7);
ubiquitin-conjugating enzyme 7 homolog [Mus musculus]
>gi|6649658|gb|AAF21503.1| (U93241) Ubc7p homolog [Mus musculus]
Length = 148
Frame 1 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | 148
0 50 100
Plus Strand HSPs:
Score = 279 (98.2 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 49/90 (54%), Positives = 65/90 (72%), Frame = +1
Query: 199 NPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPSVKFTSXIW 378
NP +G AG ++E N FEW I+GP DT +E G F AI+SFP +YP SPP ++FT ++
Sbjct: 2 NPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMF 61
Query: 379 HPNVYPDGRVCISILXPXXEDPNGYQLASE 468
HPN+YPDGRVCISIL +DP GY+ ++E
Sbjct: 62 HPNIYPDGRVCISILHAPGDDPMGYESSAE 91
>gi|4507781 ref|NP_003334.1| ubiquitin-conjugating enzyme E2G 2 (homologous to
yeast UBC7); Ubiquitin-conjugating enzyme E2G 2; human ubiquitin
conjugating enzyme G2 [Homo sapiens] >gi|3004909|gb|AAC32312.1|
(AF032456) ubiquitin conjugating enzyme G2 [Homo sapiens]
Length = 165
Frame 1 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | 165
0 50 100 150
Plus Strand HSPs:
Score = 276 (97.2 bits), Expect = 4.2e-23, P = 4.2e-23
Identities = 54/108 (50%), Positives = 69/108 (63%), Frame = +1
Query: 148 ASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFP 327
A A L K L NP +G AG ++E N FEW I+GP DT +E G F AI+SFP
Sbjct: 2 AGTALKRLMAVYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFP 61
Query: 328 SNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASEP 471
+YP SPP ++FT ++HPN+YPDGRVCISIL +DP+G L +P
Sbjct: 62 LDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPHG--LREQP 107
>gi|7293244|gb|AAF48626.1| (AE003502) Ubc7 gene product [Drosophila
melanogaster]
Length = 167
Frame 1 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | 167
0 50 100 150
Plus Strand HSPs:
Score = 274 (96.5 bits), Expect = 6.9e-23, P = 6.9e-23
Identities = 51/107 (47%), Positives = 68/107 (63%), Frame = +1
Query: 148 ASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFP 327
A A L + K L +P +G AG + E N FEW I GP T +EGG F A + FP
Sbjct: 2 AGSALRRLMAEYKQLTLDPPEGIVAGPISEDNFFEWEALIAGPEGTCFEGGVFPARLIFP 61
Query: 328 SNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
++YP SPP +KFT ++HPN++ DGRVCISIL +DP GY+L++E
Sbjct: 62 TDYPLSPPKMKFTCDMFHPNIFADGRVCISILHAPGDDPMGYELSAE 108
>gi|7799043|emb|CAB90824.1| (AJ277746) ubiquitin conjugating enzyme [Drosophila
melanogaster]
Length = 200
Frame 1 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | 200
0 50 100 150
Plus Strand HSPs:
Score = 274 (96.5 bits), Expect = 6.9e-23, P = 6.9e-23
Identities = 51/107 (47%), Positives = 68/107 (63%), Frame = +1
Query: 148 ASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFP 327
A A L + K L +P +G AG + E N FEW I GP T +EGG F A + FP
Sbjct: 2 AGSALRRLMAEYKQLTLDPPEGIVAGPISEDNFFEWEALIAGPEGTCFEGGVFPARLIFP 61
Query: 328 SNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
++YP SPP +KFT ++HPN++ DGRVCISIL +DP GY+L++E
Sbjct: 62 TDYPLSPPKMKFTCDMFHPNIFADGRVCISILHAPGDDPMGYELSAE 108
>gi|6323664 ref|NP_013735.1| ubiquitin conjugating enzyme; Qri8p [Saccharomyces
cerevisiae] >gi|401242|sp|Q02159|UBC7_YEAST UBIQUITIN-CONJUGATING
ENZYME E2-18 KD (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER
PROTEIN) >gi|322973|pir||S28951 ubiquitin-conjugating enzyme UBC7 -
yeast (Saccharomyces cerevisiae) >gi|2981900|pdb|2UCZ| Ubiquitin
Conjugating Enzyme (Ubc7) From Saccharomyces Cerevisiae
>gi|4257|emb|CAA47302.1| (X66829) ubiquitin-conjugating enzyme
[Saccharomyces cerevisiae] >gi|5523|emb|CAA48846.1| (X69100)
ubiquitin-conjugating enzyme [Saccharomyces cerevisiae]
>gi|798933|emb|CAA89125.1| (Z49211) Ubc7p [Saccharomyces
cerevisiae] >gi|444282|prf||1906336A ubiquitin-conjugating enzyme
[Saccharomyces cerevisiae]
Length = 165
Frame 1 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | | 165
0 50 100 150
Plus Strand HSPs:
Score = 273 (96.1 bits), Expect = 8.8e-23, P = 8.8e-23
Identities = 53/100 (53%), Positives = 63/100 (63%), Frame = +1
Query: 169 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 348
L K+L+ L K+ G AG E NIF W I GPPDT Y G FNA + FP +YP SP
Sbjct: 9 LLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSP 68
Query: 349 PSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
P + FT I HPN+YP+G VCISIL +DPN Y+LA E
Sbjct: 69 PKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEE 108
>gi|6425521|emb|CAB60431.1| (AL110500) contains similarity to Pfam domain:
PF00179 (Ubiquitin-conjugating enzyme), Score=291.3,
E-value=3.8e-84, N=1~cDNA EST yk221a12.3 comes from this gene~cDNA
EST yk221a12.5 comes from this gene~cDNA EST yk573c8.3 comes from
this gene~cDNA EST >
Length = 170
Frame 1 hits (HSPs): ________________________________
__________________________________________________
Database sequence: | | | | | 170
0 50 100 150
Plus Strand HSPs:
Score = 272 (95.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 50/107 (46%), Positives = 67/107 (62%), Frame = +1
Query: 148 ASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFP 327
A A L + K+L P +G A +DE N FEW I GP +T + G F A ++FP
Sbjct: 2 AGYALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFP 61
Query: 328 SNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
+YP SPP ++FT I+HPN+Y DGRVCISIL +DP GY+L++E
Sbjct: 62 QDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNE 108
>gi|9628248 ref|NP_042834.1| ubiquitin-conjugating enzyme [African swine fever
virus] >gi|136650|sp|P27949|UBC_ASFB7 UBIQUITIN-CONJUGATING ENZYME
E2-21 KD (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|70651|pir||UQXFAS ubiquitin--protein ligase (EC 6.3.2.19) E2 -
African swine fever virus (strain BA71V) >gi|210624|gb|AAA42704.1|
(M77121) ubiquitin conjugating-protein [African swine fever virus]
>gi|780510|gb|AAA65370.1| (U18466) ubiquitin-conjugating enzyme
[African swine fever virus] >gi|1097534|prf||2113434FC
ubiquitin-conjugating enzyme [African swine fever virus]
Length = 215
Frame 1 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | 215
0 50 100 150 200
Plus Strand HSPs:
Score = 271 (95.4 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 51/107 (47%), Positives = 69/107 (64%), Frame = +1
Query: 160 SLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYP 339
S L + + L +NP + F V+E NI EW V + GPPDTLYEGG F A ++FP YP
Sbjct: 3 SRFLIAEYRHLIENPSENFKIS-VNENNITEWDVILRGPPDTLYEGGLFKAKVAFPPEYP 61
Query: 340 NSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLA-SEPLDT 480
+PP + FTS +WHPN+YPDGR+CISIL + G + ++ +DT
Sbjct: 62 YAPPKLTFTSEMWHPNIYPDGRLCISILHGDNAEEQGMTWSPAQKIDT 109
>gi|12718396|emb|CAC28704.1| (AL513444) probable ubiquitin-conjugating enzyme
ubcP3 [Neurospora crassa]
Length = 166
Frame 1 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | 166
0 50 100 150
Plus Strand HSPs:
Score = 271 (95.4 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 50/109 (45%), Positives = 70/109 (64%), Frame = +1
Query: 142 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 321
M+ + A L ++ + L NP +G +AG + E ++ W I GP T +EGG F A +
Sbjct: 1 MSLNVAQRRLLQEYRALTNNPPEGITAGPISEDDLLHWECLIQGPEGTPFEGGVFPAELK 60
Query: 322 FPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
FP++YP+ PP++KF I+HPNVYP G VCISIL P +DPN Y+ ASE
Sbjct: 61 FPNDYPHMPPTMKFLGDIFHPNVYPSGLVCISILHPPGDDPNHYETASE 109
>gi|7510556|pir||T27470 hypothetical protein Y87G2A.r - Caenorhabditis elegans
Length = 237
Frame 1 hits (HSPs): _____________ ___________
__________________________________________________
Database sequence: | | | | | | 237
0 50 100 150 200
Plus Strand HSPs:
Score = 164 (57.7 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 28/49 (57%), Positives = 37/49 (75%), Frame = +1
Query: 322 FPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
F +YP SPP ++FT I+HPN+Y DGRVCISIL +DP GY+L++E
Sbjct: 127 FKKDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNE 175
Score = 113 (39.8 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 23/60 (38%), Positives = 31/60 (51%), Frame = +1
Query: 148 ASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFP 327
A A L + K+L P +G A +DE N FEW I GP +T + G F A ++FP
Sbjct: 2 AGYALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFP 61
>gi|10185167|emb|CAC08543.1| (AL441603) ubiquitin-conjugating enzyme e2-18 kda
[Schizosaccharomyces pombe]
Length = 166
Frame 1 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | 166
0 50 100 150
Plus Strand HSPs:
Score = 260 (91.5 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 50/109 (45%), Positives = 68/109 (62%), Frame = +1
Query: 142 MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 321
M+ + A L K+ K+L +N DG +AG +E + F W I GP T +EGG + A +
Sbjct: 1 MSKAMALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLK 60
Query: 322 FPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
FPS+YP PP++KF +HPNVY DG VCISIL +DPN Y+ +SE
Sbjct: 61 FPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSE 109
>gi|2501434|sp|O00102|UBC7_SCHPO UBIQUITIN-CONJUGATING ENZYME E2-18 KD
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|11272355|pir||T43235 ubiquitin-conjugating enzyme ubcP3 -
fission yeast (Schizosaccharomyces pombe)
>gi|2190252|dbj|BAA20373.1| (D85544) UbcP3 [Schizosaccharomyces
pombe]
Length = 166
Frame 1 hits (HSPs): _______________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 166
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 47..94
Entrez binding site: UBIQUITIN (BY SIMILARITY). 90
PFAM UQ_con: Ubiquitin-conjugating enzyme 3..162
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 8..161
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 79..93
__________________
Plus Strand HSPs:
Score = 256 (90.1 bits), Expect = 5.6e-21, P = 5.6e-21
Identities = 48/100 (48%), Positives = 64/100 (64%), Frame = +1
Query: 169 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 348
L K+ K+L +N DG +AG +E + F W I GP T +EGG + A + FPS+YP P
Sbjct: 10 LMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGP 69
Query: 349 PSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLASE 468
P++KF +HPNVY DG VCISIL +DPN Y+ +SE
Sbjct: 70 PTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSE 109
>gi|136651|sp|P25869|UBC_ASFM2 UBIQUITIN-CONJUGATING ENZYME E2-21 KD
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|93027|pir||S19158 ubiquitin--protein ligase (EC 6.3.2.19) E2 -
African swine fever virus (isolate Malawi LIL20/1)
>gi|58650|emb|CAA44305.1| (X62440) ubiquitin conjugating enzyme
[African swine fever virus] >gi|450743|emb|CAA50851.1| (X71982)
ubiquitin conjugating enzyme [African swine fever virus]
Length = 213
Frame 1 hits (HSPs): __________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 213
0 50 100 150 200
__________________
Annotated Domains:
Entrez binding site: UBIQUITIN (BY SIMILARITY). 85
Entrez Domain: ASP/GLU-RICH (BASIC). 183..213
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..157
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 3..156
PRODOM PD030861: UBC(2) 158..198
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 74..88
__________________
Plus Strand HSPs:
Score = 253 (89.1 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 49/107 (45%), Positives = 66/107 (61%), Frame = +1
Query: 160 SLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYP 339
S L + K+L NP + F V+E N+ EW V + GPPDTLYEGG F A + FP YP
Sbjct: 3 SSFLLAEYKNLIVNPSEHFKIS-VNEDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYP 61
Query: 340 NSPPSVKFTSXIWHPNVYPDGRVCISILXPXXEDPNGYQLA-SEPLDT 480
PP + FTS +WHPN+Y DG++CISIL + G + ++ +DT
Sbjct: 62 YEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGMTWSPAQKIDT 109
>gi|6320259 ref|NP_010339.1| ubiquitin-conjugating enzyme, E2; Cdc34p
[Saccharomyces cerevisiae] >gi|136642|sp|P14682|UBC3_YEAST
UBIQUITIN-CONJUGATING ENZYME E2-34 KD (UBIQUITIN-PROTEIN LIGASE)
(UBIQUITIN CARRIER PROTEIN) (CELL DIVISION CONTROL PROTEIN 34)
>gi|101249|pir||A41241 ubiquitin-conjugating enzyme CDC34 - yeast
(Saccharomyces cerevisiae) >gi|173124|gb|AAA35188.1| (M21877)
ubiquitin-conjugating enzyme [Saccharomyces cerevisiae]
>gi|706820|emb|CAA58970.1| (X84162) ubiquitin conjugatin enzyme
[Saccharomyces cerevisiae] >gi|798905|emb|CAA89083.1| (Z49209)
Ubc3p [Saccharomyces cerevisiae] >gi|1431497|emb|CAA98872.1|
(Z74350) ORF YDR054c [Saccharomyces cerevisiae]
Length = 295
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | | | 295
0 50 100 150 200 250
Plus Strand HSPs:
Score = 230 (81.0 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 47/106 (44%), Positives = 67/106 (63%), Frame = +1
Query: 151 SQASLLLQKQLKDLC--KNPVDGFSAGLVDETNIFEWSVTI-IGPPDTLYEGGFFNAIMS 321
S AS LL +Q ++L K + F L D++NIF W++ + + D++Y GGFF A M
Sbjct: 6 STASSLLLRQYRELTDPKKAIPSFHIELEDDSNIFTWNIGVMVLNEDSIYHGGFFKAQMR 65
Query: 322 FPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISILX----PXXEDPN 447
FP ++P SPP +FT I+HPNVY DGR+CISIL P ++P+
Sbjct: 66 FPEDFPFSPPQFRFTPAIYHPNVYRDGRLCISILHQSGDPMTDEPD 111
>gi|9989034|gb|AAG10797.1|AC022284_2 (AC022284) Ubiquitin-conjugating enzyme
[Leishmania major] >gi|11022580|emb|CAC14238.1| (AL445678) probable
ubiquitin-conjugating enzyme e2-17 kda [Leishmania major]
Length = 148
Frame 1 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | 148
0 50 100
Plus Strand HSPs:
Score = 228 (80.3 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 41/85 (48%), Positives = 58/85 (68%), Frame = +1
Query: 169 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 348
+QK+LKDL K+P S G V E+++F W TIIGP D+ Y GG F + FPS+YP P
Sbjct: 6 IQKELKDLEKDPPANTSGGPVSESDLFNWKATIIGPEDSPYAGGLFFLNIHFPSDYPFKP 65
Query: 349 PSVKFTSXIWHPNVYPDGRVCISIL 423
P ++FT+ I+HPN+ +G +C+ IL
Sbjct: 66 PKLQFTTKIYHPNINNNGGICLDIL 90
>gi|6690139|gb|AAF24004.1|AF083031_1 (AF083031) ubiquitin conjugating enzyme
[Guillardia theta] >gi|6690600|gb|AAF24208.1|AF165818_1 (AF165818)
ubiquitin-conjugating enzyme [Guillardia theta]
>gi|12580660|emb|CAC26977.1| (AJ010592) ubiquitin conjugating
enzyme [Guillardia theta] >gi|12580795|emb|CAC27113.1| (AJ010592)
ubiquitin conjugating enzyme [Guillardia theta]
Length = 147
Frame 1 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | 147
0 50 100
Plus Strand HSPs:
Score = 222 (78.1 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 42/89 (47%), Positives = 59/89 (66%), Frame = +1
Query: 157 ASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNY 336
A+ +QK+ KDL K+P SAG DE N+F W+ +IIGP D+ Y GG F + FP +Y
Sbjct: 2 ATKRIQKEHKDLLKDPPSNCSAGPSDE-NLFRWTASIIGPSDSPYAGGVFFLSILFPPDY 60
Query: 337 PNSPPSVKFTSXIWHPNVYPDGRVCISIL 423
P PP V+FT+ I+HPN+ +G +C+ IL
Sbjct: 61 PFKPPKVQFTTKIYHPNINSNGSICLDIL 89
>gi|4507773 ref|NP_003329.1| ubiquitin-conjugating enzyme E2D 1 (homologous to
yeast UBC4/5); UbcH5A [Homo sapiens]
>gi|1717848|sp|P51668|UB5A_HUMAN UBIQUITIN-CONJUGATING ENZYME E2-17
KDA 1 (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
(E2(17)KB 1) >gi|2136338|pir||I39202 ubiquitin conjugating enzyme -
human >gi|460810|emb|CAA55019.1| (X78140) ubiquitin conjugating
enzyme [Homo sapiens]
Length = 147
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | 147
0 50 100
Plus Strand HSPs:
Score = 219 (77.1 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 38/85 (44%), Positives = 58/85 (68%), Frame = +1
Query: 169 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 348
+QK+L DL ++P SAG V + ++F W TI+GPPD+ Y+GG F + FP++YP P
Sbjct: 6 IQKELSDLQRDPPAHCSAGPVGD-DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKP 64
Query: 349 PSVKFTSXIWHPNVYPDGRVCISIL 423
P + FT+ I+HPN+ +G +C+ IL
Sbjct: 65 PKIAFTTKIYHPNINSNGSICLDIL 89
>gi|464979|sp|P35129|UBC2_CAEEL UBIQUITIN-CONJUGATING ENZYME E2-17 KDA
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|7506114|pir||T23820 hypothetical protein M7.1 - Caenorhabditis
elegans >gi|3878673|emb|CAA92745.1| (Z68337) contains similarity to
Pfam domain: PF00179 (Ubiquitin-conjugating enzyme), Score=320.8,
E-value=5.2e-93, N=1~cDNA EST yk119b8.5 comes from this gene~cDNA
EST CEMSE48F comes from this gene~cDNA EST EMBL:T00827 comes from
this gene~cDNA EST EMB> >gi|7327273|gb|AAB25489.2| (S56051)
ubiquitin-conjugating enzyme [Caenorhabditis elegans]
Length = 147
Frame 1 hits (HSPs): _____________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | 147
0 50 100
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 42..89
Entrez binding site: UBIQUITIN (BY SIMILARITY). 85
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..144
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 2..143
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 74..88
__________________
Plus Strand HSPs:
Score = 215 (75.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 38/85 (44%), Positives = 59/85 (69%), Frame = +1
Query: 169 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 348
+QK+L+DL ++P SAG V + ++F W TI+GPP++ Y+GG F + FP++YP P
Sbjct: 6 IQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKP 64
Query: 349 PSVKFTSXIWHPNVYPDGRVCISIL 423
P V FT+ I+HPN+ +G +C+ IL
Sbjct: 65 PKVAFTTRIYHPNINSNGSICLDIL 89
>gi|7493574|pir||T37559 ubiquitin-conjugating enzyme e2-16 kd - fission yeast
(Schizosaccharomyces pombe) >gi|5830482|emb|CAB54826.1| (AL110509)
ubiquitin-conjugating enzyme e2-16 kd [Schizosaccharomyces pombe]
Length = 155
Frame 1 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | | 155
0 50 100 150
Plus Strand HSPs:
Score = 215 (75.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 38/93 (40%), Positives = 61/93 (65%), Frame = +1
Query: 145 AASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSF 324
A+ +S L K+ DL ++P+ LVD+ N+F W+ T +GP D++Y GG F+ + F
Sbjct: 4 ASPSSSRRLTKEYSDLREHPIPDIRVNLVDD-NLFHWACTALGPSDSVYAGGKFHFSLKF 62
Query: 325 PSNYPNSPPSVKFTSXIWHPNVYPDGRVCISIL 423
P +YP PP+++FT+ I+HPN +G VC++IL
Sbjct: 63 PLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAIL 95
>gi|136643|sp|P25867|UBC1_DROME UBIQUITIN-CONJUGATING ENZYME E2-17 KDA
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (EFFETE
PROTEIN) >gi|103438|pir||S19157 ubiquitin-conjugating enzyme -
fruit fly (Drosophila melanogaster) >gi|8783|emb|CAA44453.1|
(X62575) ubiquitin-conjugating enzyme [Drosophila melanogaster]
>gi|7299919|gb|AAF55093.1| (AE003706) eff gene product [alt 2]
[Drosophila melanogaster] >gi|7299920|gb|AAF55094.1| (AE003706) eff
gene product [alt 1] [Drosophila melanogaster]
Length = 147
Frame 1 hits (HSPs): _____________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | 147
0 50 100
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 42..89
Entrez binding site: UBIQUITIN (BY SIMILARITY). 85
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..144
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 2..143
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 74..88
__________________
Plus Strand HSPs:
Score = 214 (75.3 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 38/85 (44%), Positives = 58/85 (68%), Frame = +1
Query: 169 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 348
+ K+L+DL ++P SAG V + ++F W TI+GPPD+ Y+GG F + FP++YP P
Sbjct: 6 INKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKP 64
Query: 349 PSVKFTSXIWHPNVYPDGRVCISIL 423
P V FT+ I+HPN+ +G +C+ IL
Sbjct: 65 PKVAFTTRIYHPNINSNGSICLDIL 89
>gi|477134|pir||A48145 ubiquitin-conjugating enzyme ubc-2 - Caenorhabditis
elegans
Length = 147
Frame 1 hits (HSPs): _____________________________
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | 147
0 50 100
__________________
Annotated Domains:
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 74..88
__________________
Plus Strand HSPs:
Score = 214 (75.3 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 38/85 (44%), Positives = 58/85 (68%), Frame = +1
Query: 169 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 348
+QK+L+DL + P SAG V + ++F W TI+GPP++ Y+GG F + FP++YP P
Sbjct: 6 IQKELQDLGREPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKP 64
Query: 349 PSVKFTSXIWHPNVYPDGRVCISIL 423
P V FT+ I+HPN+ +G +C+ IL
Sbjct: 65 PKVAFTTRIYHPNINSNGSICLDIL 89
>gi|2501435|sp|O00103|UBCD_SCHPO UBIQUITIN-CONJUGATING ENZYME E2-20 KDA
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN)
>gi|7493564|pir||T40902 ubiquitin conjugating enzyme - fission
yeast (Schizosaccharomyces pombe) >gi|2190255|dbj|BAA20375.1|
(D85545) UcbP4 [Schizosaccharomyces pombe]
>gi|4469325|emb|CAB38416.1| (AL034564) ubiquitin conjugating enzyme
[Schizosaccharomyces pombe]
Length = 176
Frame 1 hits (HSPs): _________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 176
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 70..117
Entrez binding site: UBIQUITIN (BY SIMILARITY). 113
PFAM UQ_con: Ubiquitin-conjugating enzyme 16..172
PRODOM PD159743: UBCD_SCHPO 1..25
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 27..163
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 102..116
__________________
Plus Strand HSPs:
Score = 213 (75.0 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 45/115 (39%), Positives = 64/115 (55%), Frame = +1
Query: 79 SVLKRVNSLFSSLRSSTCLPFMAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWS 258
S ++ N +S SS+ + + L+ +L L + G SA ++N+ W+
Sbjct: 3 SDMQNQNPHTNSKNSSSAGMAVDGHSVTKRLRSELMSLMMSNTPGISAFPDSDSNLLHWA 62
Query: 259 VTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPSVKFTSXIWHPNVYPDGRVCISIL 423
TI GP DT YEG F MSFP+NYP SPP++ FTS +WHPNV G +C+ IL
Sbjct: 63 GTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDIL 117
>gi|2612962|gb|AAB84397.1| (AF026506) ubiquitin-conjugating enzyme [Drosophila
silvestris]
Length = 103
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | | 103
0 20 40 60 80 100
Plus Strand HSPs:
Score = 213 (75.0 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 38/85 (44%), Positives = 58/85 (68%), Frame = +1
Query: 169 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 348
+ K+L+DL ++P SAG V + ++F W TI+GPPD+ Y+GG F + FP++YP P
Sbjct: 6 INKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKP 64
Query: 349 PSVKFTSXIWHPNVYPDGRVCISIL 423
P V FT+ I+HPN+ +G +C+ IL
Sbjct: 65 PKVAFTTRIYHPNINSNGSICLHIL 89
>gi|12643427|sp|P35134|UBCB_ARATH UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 11
(UBIQUITIN-PROTEIN LIGASE 11) (UBIQUITIN CARRIER PROTEIN 11)
>gi|12322738|gb|AAG51362.1|AC012562_23 (AC012562) putative
ubiquitin conjugating enzyme; 52410-53412 [Arabidopsis thaliana]
Length = 148
Frame 1 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | 148
0 50 100
Plus Strand HSPs:
Score = 213 (75.0 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 40/89 (44%), Positives = 57/89 (64%), Frame = +1
Query: 157 ASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNY 336
AS + K+LKDL K+P SAG V E ++F W TI+GPP++ Y GG F + FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAE-DMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 337 PNSPPSVKFTSXIWHPNVYPDGRVCISIL 423
P PP V F + ++HPN+ +G +C+ IL
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDIL 89
>gi|2668744|gb|AAB88617.1| (AF034946) ubiquitin conjugating enzyme [Zea mays]
Length = 148
Frame 1 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | 148
0 50 100
Plus Strand HSPs:
Score = 211 (74.3 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 40/89 (44%), Positives = 56/89 (62%), Frame = +1
Query: 157 ASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNY 336
AS + K+LKDL K+P SAG E ++F W TI+GPPD+ Y GG F + FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPAGE-DMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
Query: 337 PNSPPSVKFTSXIWHPNVYPDGRVCISIL 423
P PP V F + ++HPN+ +G +C+ IL
Sbjct: 61 PFKPPKVSFKTKVFHPNINSNGSICLDIL 89
>gi|2501431|sp|P70711|UB5D_RAT UBIQUITIN-CONJUGATING ENZYME E2-17 KD 4
(UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (E2(17)KB 4)
>gi|1515423|gb|AAC52942.1| (U56407) Ubiquitin conjugating enzyme
[Rattus norvegicus]
Length = 147
Frame 1 hits (HSPs): _____________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | 147
0 50 100
__________________
Annotated Domains:
Entrez binding site: UBIQUITIN (BY SIMILARITY). 85
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..144
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 2..143
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 74..88
__________________
Plus Strand HSPs:
Score = 210 (73.9 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 39/85 (45%), Positives = 56/85 (65%), Frame = +1
Query: 169 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 348
+ K+L DL ++P SAG V E ++F W TI+GP D+ Y+GG F + FP+ YP P
Sbjct: 6 IHKELNDLAQDPPAQCSAGPVGE-DMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKP 64
Query: 349 PSVKFTSXIWHPNVYPDGRVCISIL 423
P V+FT+ I+HPNV +G +C+ IL
Sbjct: 65 PKVEFTTRIYHPNVNSNGSICLDIL 89
>gi|456568|gb|AAA64427.1| (L29077) ubiquitin conjugating enzyme [Pisum sativum]
Length = 148
Frame 1 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | 148
0 50 100
Plus Strand HSPs:
Score = 209 (73.6 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 40/89 (44%), Positives = 56/89 (62%), Frame = +1
Query: 157 ASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNY 336
AS + K+LKDL K+P SAG V E ++F W TI+GP D+ Y GG F + FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIVGPADSPYAGGVFLVTIHFPPDY 60
Query: 337 PNSPPSVKFTSXIWHPNVYPDGRVCISIL 423
P PP V F + ++HPN+ +G +C+ IL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL 89
>gi|3323498|gb|AAC39499.1| (AF030296) ubiquitin conjugating enzyme UBC1
[Glomerella cingulata]
Length = 147
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | 147
0 50 100
Plus Strand HSPs:
Score = 209 (73.6 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 38/85 (44%), Positives = 55/85 (64%), Frame = +1
Query: 169 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 348
+ K+L DL ++P SAG V E ++F W TI+GP D+ Y GG F + FP++YP P
Sbjct: 6 INKELTDLGRDPPSSCSAGPVGE-DLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKP 64
Query: 349 PSVKFTSXIWHPNVYPDGRVCISIL 423
P V FT+ I+HPN+ +G +C+ IL
Sbjct: 65 PKVNFTTRIYHPNINSNGSICLDIL 89
>gi|5762457|gb|AAD51109.1|AF176040_1 (AF176040) ubiquitin-conjugating enzyme
UBC2 [Mesembryanthemum crystallinum]
Length = 148
Frame 1 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | 148
0 50 100
Plus Strand HSPs:
Score = 209 (73.6 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 40/89 (44%), Positives = 56/89 (62%), Frame = +1
Query: 157 ASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNY 336
AS + K+LKDL K+P SAG V E ++F W TI+GP D+ Y GG F + FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVGE-DMFHWQATIMGPSDSPYAGGLFLVTIHFPPDY 60
Query: 337 PNSPPSVKFTSXIWHPNVYPDGRVCISIL 423
P PP V F + ++HPN+ +G +C+ IL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL 89
>gi|5917672|gb|AAD55983.1|AF161722_1 (AF161722) ubiquitin-conjugating protein
[Magnaporthe grisea]
Length = 147
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | 147
0 50 100
Plus Strand HSPs:
Score = 209 (73.6 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 38/85 (44%), Positives = 55/85 (64%), Frame = +1
Query: 169 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 348
+ K+L DL ++P SAG V E ++F W TI+GP D+ Y GG F + FP++YP P
Sbjct: 6 INKELTDLGRDPPSSCSAGPVGE-DLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKP 64
Query: 349 PSVKFTSXIWHPNVYPDGRVCISIL 423
P V FT+ I+HPN+ +G +C+ IL
Sbjct: 65 PKVNFTTRIYHPNINSNGSICLDIL 89
>gi|464986|sp|P35132|UBC9_ARATH UBIQUITIN-CONJUGATING ENZYME E2-17 KD 9
(UBIQUITIN-PROTEIN LIGASE 9) (UBIQUITIN CARRIER PROTEIN 9)
(UBCAT4B) >gi|421857|pir||S32674 ubiquitin--protein ligase (EC
6.3.2.19) UBC9 - Arabidopsis thaliana >gi|297884|emb|CAA78714.1|
(Z14990) ubiquitin conjugating enzyme homolog [Arabidopsis
thaliana] >gi|349211|gb|AAA32894.1| (L00639) ubiquitin conjugating
enzyme [Arabidopsis thaliana] >gi|600391|emb|CAA51201.1| (X72626)
ubiquitin conjugating enzyme E2 [Arabidopsis thaliana]
>gi|4455355|emb|CAB36765.1| (AL035524) ubiquitin-protein ligase
UBC9 [Arabidopsis thaliana] >gi|7269650|emb|CAB79598.1| (AL161572)
ubiquitin-protein ligase UBC9 [Arabidopsis thaliana]
Length = 148
Frame 1 hits (HSPs): ______________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | 148
0 50 100
__________________
Annotated Domains:
BLOCKS BL00183: Ubiquitin-conjugating enzymes p 42..89
Entrez binding site: UBIQUITIN (BY SIMILARITY). 85
PFAM UQ_con: Ubiquitin-conjugating enzyme 1..144
PRODOM PD000461: UBC2(10) UBC4(7) UBC7(7) 2..143
PROSITE UBIQUITIN_CONJUGAT: Ubiquitin-conjugatin 74..88
__________________
Plus Strand HSPs:
Score = 208 (73.2 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 40/89 (44%), Positives = 56/89 (62%), Frame = +1
Query: 157 ASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNY 336
AS + K+LKDL K+P SAG V E ++F W TI+GP D+ Y GG F + FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 337 PNSPPSVKFTSXIWHPNVYPDGRVCISIL 423
P PP V F + ++HPN+ +G +C+ IL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL 89
>gi|441457|emb|CAA51821.1| (X73419) ubiquitin conjugating enzyme E2
[Lycopersicon esculentum]
Length = 148
Frame 1 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | 148
0 50 100
Plus Strand HSPs:
Score = 208 (73.2 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 40/89 (44%), Positives = 56/89 (62%), Frame = +1
Query: 157 ASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNY 336
AS + K+LKDL K+P SAG V E ++F W TI+GP D+ Y GG F + FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPADSPYSGGVFLVTIHFPPDY 60
Query: 337 PNSPPSVKFTSXIWHPNVYPDGRVCISIL 423
P PP V F + ++HPN+ +G +C+ IL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL 89
>gi|8393719 ref|NP_057067.1| ubiquitin-conjugating enzyme HBUCE1 [Homo sapiens]
>gi|4868140|gb|AAD31180.1|AF125044_1 (AF125044)
ubiquitin-conjugating enzyme HBUCE1 [Homo sapiens]
>gi|7022710|dbj|BAA91697.1| (AK001446) unnamed protein product
[Homo sapiens]
Length = 147
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | 147
0 50 100
Plus Strand HSPs:
Score = 208 (73.2 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 38/85 (44%), Positives = 57/85 (67%), Frame = +1
Query: 169 LQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 348
+QK+L DL ++P SAG V + ++F W TI+GP D+ Y+GG F + FP++YP P
Sbjct: 6 IQKELTDLQRDPPAQCSAGPVGD-DLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKP 64
Query: 349 PSVKFTSXIWHPNVYPDGRVCISIL 423
P V FT+ I+HPN+ +G +C+ IL
Sbjct: 65 PKVAFTTKIYHPNINSNGSICLDIL 89
WARNING: HSPs involving 281 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.96
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.353 0.156 0.578
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.336 0.144 0.460
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.325 0.139 0.436
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.353 0.160 0.629
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.337 0.148 0.490
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.347 0.154 0.492
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 161 157 10. 74 3 12 22 0.098 34
30 0.12 36
+2 0 162 159 10. 75 3 12 22 0.099 34
30 0.098 37
+1 0 162 158 10. 74 3 12 22 0.098 34
30 0.097 37
-1 0 162 159 10. 75 3 12 22 0.099 34
30 0.098 37
-2 0 162 158 10. 74 3 12 22 0.098 34
30 0.097 37
-3 0 161 157 10. 74 3 12 22 0.098 34
30 0.12 36
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 331
No. of states in DFA: 591 (58 KB)
Total size of DFA: 194 KB (256 KB)
Time to generate neighborhood: 0.01u 0.01s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 167.77u 1.16s 168.93t Elapsed: 00:00:28
Total cpu time: 167.81u 1.21s 169.02t Elapsed: 00:00:28
Start: Wed Jan 30 19:41:58 2002 End: Wed Jan 30 19:42:26 2002
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000