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Bos taurus
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UniSTS:74770
Links
D5S2006
Homo sapiens
chromosome 5, loci BTNL8 and LOC653117, polymorphic
Pan troglodytes
chromosome 5, locus BTNL8
Found by e-PCR in sequences from
Homo sapiens
and
Pan troglodytes
.
Primer Information
Forward primer:
TGTATTCTTAAATTCTGTGAAGAGG
Reverse primer:
ATCCATCATCTCCCGTAG
PCR product size:
125-155 (bp),
Homo sapiens
GenBank Accession:
Z53048
Homo sapiens
Name:
D5S2006
Also known as:
AFMb005wf9 GDB:602583 GDB:609171 HSB005WF9 SHGC-21874
Polymorphism info:
on genetic map
Cross References
Gene
GeneID:
653117
Symbol:
LOC653117
Description:
similar to B7h.4
Position:
Gene
GeneID:
79908
Symbol:
BTNL8
Description:
butyrophilin-like 8
Position:
5q35.3
Mapping Information
D5S2006
Sequence Map:
Chr 5|HuRef
Map Viewer
Position:
175073704-175073856 (bp)
D5S2006
Sequence Map:
Chr 5|Celera
Map Viewer
Position:
175972325-175972477 (bp)
D5S2006
Sequence Map:
Chr 5
Map Viewer
Position:
180281217-180281369 (bp)
D5S2006
Sequence Map:
Chr 5|NT_113890.1
Map Viewer
Position:
86641-86795 (bp)
D5S2006
deCODE
Map:
Chr 5
Map Viewer
Position:
205.69 (cM)
AFMb005wf9
Genethon Map:
Chr 5
Map Viewer
Position:
197.60 (cM)
AFMb005wf9
Marshfield
Map:
Chr 5
Map Viewer
Position:
197.54 (cM)
SHGC-21874
TNG
Map:
Chr
5
Map Viewer
Position:
84915 (cR50000)
Lod score:
6
Reference Interval:
227
Electronic PCR results
Genomic
(10)
Z53048.1
18 .. 162 (145 bp)
AC016572.6
86641 .. 86795 (155 bp)
AC091874.4
137238 .. 137390 (153 bp)
CH003452.1
177433788 .. 177433940 (153 bp)
CH003500.1
187739997 .. 187740149 (153 bp)
AB135316.1
242 .. 394 (153 bp)
CH471165.2
2869673 .. 2869825 (153 bp)
CM000256.1
175972325 .. 175972477 (153 bp)
DS486201.1
2878036 .. 2878188 (153 bp)
CM000466.1
175073704 .. 175073856 (153 bp)
Whole Genome Shotgun sequences
(4)
AADD01066429.1
8181 .. 8333 (153 bp)
AADC01057767.1
13322 .. 13474 (153 bp)
AADB02009890.1
98035 .. 98187 (153 bp)
ABBA01010087.1
35405 .. 35557 (153 bp)
Pan troglodytes
Name:
D5S2006
Polymorphism info:
Cross References
Gene
GeneID:
741207
Symbol:
BTNL8
Description:
butyrophilin-like 8
Position:
Mapping Information
D5S2006
Sequence Map:
Chr 5
Map Viewer
Position:
183422222-183422358 (bp)
D5S2006
Sequence Map:
Chr 5
Map Viewer
Position:
183424082-183424228 (bp)
Electronic PCR results
Genomic
(2)
CM000319.1
183422222 .. 183422358 (137 bp)
CM000319.1
183424082 .. 183424228 (147 bp)
Whole Genome Shotgun sequences
(3)
AADA01275441.1
15089 .. 15235 (147 bp)
AACZ02067142.1
944 .. 1090 (147 bp)
AACZ02067141.1
1357 .. 1493 (137 bp)
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