proteins
| 11 proteins |
R | COG3577 | Predicted aspartyl protease | Help | |
|---|---|---|---|---|---|
| 1 from | query genome Brucella melitensis (Rhizobiales | Alphaproteobacteria) | ||||
| BMEI1102 | ||||
215 letters (r) 0
0 946 = ||| 1 BMEI1102 (215) = 20
0 517 = ||| 2 mlr0565 (235) = 18
180
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BMEI1102
(215 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
BMEI1102 369 e-102
mlr0565 203 2e-52
AGc3474 174 1e-43
SMc04217 164 2e-40
RC1339 118 9e-27
RP867 117 2e-26
CC1307 84 2e-16
AGc215 84 3e-16
mll3161 77 2e-14
PA4048 74 3e-13
PA4965 64 3e-10
SPAC56F8.07 34 0.29
CC1722 32 1.2
PAE0531 31 1.6
MT3813 30 2.8
Rv3710 30 2.9
SPCC417.09c 30 5.2
CT209 29 5.9
all7120 29 6.1
all5097 29 7.9
# >BMEI1102
# Length = 215
#
# Score = 369 bits (946), Expect = e-102
# Identities = 215/215 (100%), Positives = 215/215 (100%)
#
# Query: 1 MSNNDSGTTLGVANDAFARAAYLGIWGIVLAAGLLGSGIRLGDFARNIAIWSVIILGLVA 60
# MSNNDSGTTLGVANDAFARAAYLGIWGIVLAAGLLGSGIRLGDFARNIAIWSVIILGLVA
# Sbjct: 1 MSNNDSGTTLGVANDAFARAAYLGIWGIVLAAGLLGSGIRLGDFARNIAIWSVIILGLVA 60
#
# Query: 61 GYQYRYDLQDAASRITAGLIPGSPISGMNADGTLTVTLAKSANGHFEVNGRVNGARVHFL 120
# GYQYRYDLQDAASRITAGLIPGSPISGMNADGTLTVTLAKSANGHFEVNGRVNGARVHFL
# Sbjct: 61 GYQYRYDLQDAASRITAGLIPGSPISGMNADGTLTVTLAKSANGHFEVNGRVNGARVHFL 120
#
# Query: 121 VDTGASSVVLSQEDAERAGIDTASLNYSVPIMTANGQARAASITIATLQIGDIERHNVRA 180
# VDTGASSVVLSQEDAERAGIDTASLNYSVPIMTANGQARAASITIATLQIGDIERHNVRA
# Sbjct: 121 VDTGASSVVLSQEDAERAGIDTASLNYSVPIMTANGQARAASITIATLQIGDIERHNVRA 180
#
# Query: 181 MVTKEGLLTGSLLGMNFLQTLGGFTVRGDQLILIN 215
# MVTKEGLLTGSLLGMNFLQTLGGFTVRGDQLILIN
# Sbjct: 181 MVTKEGLLTGSLLGMNFLQTLGGFTVRGDQLILIN 215
#
#
# >mlr0565
# Length = 235
#
# Score = 203 bits (517), Expect = 2e-52
# Identities = 115/211 (54%), Positives = 151/211 (71%)
#
# Query: 3 NNDSGTTLGVANDAFARAAYLGIWGIVLAAGLLGSGIRLGDFARNIAIWSVIILGLVAGY 62
# N+ +G+TLGV N F R +LG +G ++ AGLL SG LGD ARN W+ I+L L+AGY
# Sbjct: 23 NDSAGSTLGVENYDFGRLIWLGAFGALIGAGLLRSGRPLGDMARNFGAWAAIVLALIAGY 82
#
# Query: 63 QYRYDLQDAASRITAGLIPGSPISGMNADGTLTVTLAKSANGHFEVNGRVNGARVHFLVD 122
# QYRY+LQD ASR+TAGL+PGSP++ DG TVTL K+ NGHFE VNG V +VD
# Sbjct: 83 QYRYELQDIASRVTAGLVPGSPLALGVEDGHATVTLDKADNGHFEARILVNGKPVRAVVD 142
#
# Query: 123 TGASSVVLSQEDAERAGIDTASLNYSVPIMTANGQARAASITIATLQIGDIERHNVRAMV 182
# TGA+S VL+ EDA+ AG + A+LNY++P+ TANG ARAA++ + IG I R ++ MV
# Sbjct: 143 TGATSTVLTSEDAQAAGFNPAALNYTIPVSTANGMARAAAVKTDAVAIGGIVRKDMPVMV 202
#
# Query: 183 TKEGLLTGSLLGMNFLQTLGGFTVRGDQLIL 213
# G+L+ SLLGMNF+ +L GF VRGD++IL
# Sbjct: 203 AAPGMLSQSLLGMNFIGSLSGFDVRGDRMIL 233
#
#
# >AGc3474
# Length = 235
#
# Score = 174 bits (442), Expect = 1e-43
# Identities = 111/217 (51%), Positives = 140/217 (64%), Gaps = 11/217 (5%)
#
# Query: 3 NNDSGTTLGVANDAFARAAYLGIWGIVLAAGLLGSGI---RLGDFA---RNIAIWSVIIL 56
# N+D G TLG+ ND FA+A YL V AGLL GI R G F R +A+W VIIL
# Sbjct: 21 NHDGGRTLGIDNDQFAQALYL-----VPIAGLLSVGILAGRRGGFGTVIRQLAVWLVIIL 75
#
# Query: 57 GLVAGYQYRYDLQDAASRITAGLIPGSPISGMNADGTLTVTLAKSANGHFEVNGRVNGAR 116
# GLV+ Y YRYDLQ R+ +GL+PG + A G + L KS +GHFE N VNG
# Sbjct: 76 GLVSLYLYRYDLQSFGDRLLSGLMPGRAVVVTTAGGEQEIVLHKSMSGHFEANVGVNGKT 135
#
# Query: 117 VHFLVDTGASSVVLSQEDAERAGIDTASLNYSVPIMTANGQARAASITIATLQIGDIERH 176
# +H LVDTGASSVVL+ DA GIDT SL Y+VP+MTANG+ AA +T++ + IG I R
# Sbjct: 136 IHMLVDTGASSVVLANADAAEIGIDTGSLRYTVPVMTANGRTAAAPVTLSEIGIGPIMRR 195
#
# Query: 177 NVRAMVTKEGLLTGSLLGMNFLQTLGGFTVRGDQLIL 213
# N+ A+V ++G L SLLGM+FL TLG ++ D+L L
# Sbjct: 196 NIPALVAQDGQLGQSLLGMSFLSTLGSLQMQTDELRL 232
#
#
# >SMc04217
# Length = 233
#
# Score = 164 bits (414), Expect = 2e-40
# Identities = 100/211 (47%), Positives = 132/211 (62%)
#
# Query: 3 NNDSGTTLGVANDAFARAAYLGIWGIVLAAGLLGSGIRLGDFARNIAIWSVIILGLVAGY 62
# N+DSG T G+ ND F + LG + AAG++ S LG+ IAIW +I L LVA Y
# Sbjct: 21 NHDSGRTFGMNNDDFGQLVALGALATLFAAGIVRSRRTLGEGLTQIAIWLLIALVLVALY 80
#
# Query: 63 QYRYDLQDAASRITAGLIPGSPISGMNADGTLTVTLAKSANGHFEVNGRVNGARVHFLVD 122
# YR++LQ R+ AGL+PG + +++G V L K +GHF + +NG V LVD
# Sbjct: 81 VYRFELQSVGDRVLAGLMPGRAMVITDSEGQQEVVLHKRIDGHFAADATINGREVSMLVD 140
#
# Query: 123 TGASSVVLSQEDAERAGIDTASLNYSVPIMTANGQARAASITIATLQIGDIERHNVRAMV 182
# TGASSVVL+ EDA RAG++ A L Y++ +MTANG A AA + + + IG I R N+RAMV
# Sbjct: 141 TGASSVVLTHEDAARAGLEVADLGYTITVMTANGPALAAPVILPEIAIGPIRRTNIRAMV 200
#
# Query: 183 TKEGLLTGSLLGMNFLQTLGGFTVRGDQLIL 213
# EG L SLLGM+FL TL +R D+L L
# Sbjct: 201 AAEGRLDSSLLGMSFLSTLDFLQMRSDELRL 231
#
#
# >RC1339
# Length = 231
#
# Score = 118 bits (296), Expect = 9e-27
# Identities = 65/170 (38%), Positives = 102/170 (59%), Gaps = 6/170 (3%)
#
# Query: 44 FARNIAIWSVIILGLVAGYQYRYDLQDAASRITAGLIPGSPISGMNADGTLTVTLAKSAN 103
# F +A+W+VI L ++ GY +R++L A R+ + LIP S + + +A++ +
# Sbjct: 66 FCLQLAMWAVIFLVIITGYAFRFELNYAYHRVMSALIPSYKWSTEVGE----IIIARNRD 121
#
# Query: 104 GHFEVNGRVNGARVHFLVDTGASSVVLSQEDAERAGIDTASLNYSVPIMTANGQARAASI 163
# GHF +N VN ++ F+VDTGAS + L++EDA++ G D L Y+ +TANG+ +AA I
# Sbjct: 122 GHFYINAFVNNVKIKFMVDTGASDIALTKEDAQKLGFDLTKLKYTRTYLTANGENKAAPI 181
#
# Query: 164 TIATLQIGDIERHNVRAMVTKEGLLTGSLLGMNFLQTLGGFTVRGDQLIL 213
# T+ ++ IG E N++ V G L SLLGM+ L+ GF + D LIL
# Sbjct: 182 TLNSVVIGK-EFKNIKGHVGL-GDLDISLLGMSLLERFKGFRIDKDLLIL 229
#
#
# >RP867
# Length = 231
#
# Score = 117 bits (293), Expect = 2e-26
# Identities = 65/170 (38%), Positives = 101/170 (59%), Gaps = 6/170 (3%)
#
# Query: 44 FARNIAIWSVIILGLVAGYQYRYDLQDAASRITAGLIPGSPISGMNADGTLTVTLAKSAN 103
# F +A+W+VI L ++ GY +R++L A R+ + LIP S + + +A+S +
# Sbjct: 66 FCFQLAMWAVIFLVIITGYAFRFELHYAYHRVISALIPSYKWSTEVGE----IIIARSGD 121
#
# Query: 104 GHFEVNGRVNGARVHFLVDTGASSVVLSQEDAERAGIDTASLNYSVPIMTANGQARAASI 163
# GHF +N VN ++ F+VDTGAS + L++EDA++ G D L Y+ +TANG+ +AA I
# Sbjct: 122 GHFYINACVNNVKIKFMVDTGASDIALTKEDAQKLGFDLNKLKYTRTYLTANGENKAAPI 181
#
# Query: 164 TIATLQIGDIERHNVRAMVTKEGLLTGSLLGMNFLQTLGGFTVRGDQLIL 213
# + ++ IG E N++ V G L SLLGM+ L+ GF + D LIL
# Sbjct: 182 ILNSVVIG-TEFKNIKGHVGL-GNLDISLLGMSLLERFKGFRIDKDLLIL 229
#
#
# >CC1307
# Length = 172
#
# Score = 84.3 bits (207), Expect = 2e-16
# Identities = 52/116 (44%), Positives = 75/116 (63%), Gaps = 1/116 (0%)
#
# Query: 98 LAKSANGHFEVNGRVNGARVHFLVDTGASSVVLSQEDAERAGIDTASLNYSVPIMTANGQ 157
# L+K ++GHF G V+G V FLVDTGA++V LS DA+R GIDT+ L Y ++TA+G+
# Sbjct: 56 LSKDSDGHFWAQGNVDGKAVRFLVDTGATAVSLSLADAQRLGIDTSRLTYDYNVITADGR 115
#
# Query: 158 ARAASITIATLQIGDIERHNVRAMVTKEGLLTGSLLGMNFLQTLGGFTVRGDQLIL 213
# RAA++ +A++ I +V A+V ++G L SLLGM++L L F LIL
# Sbjct: 116 TRAAAVKLASVSIAGARVRDVDALVIEKG-LENSLLGMSYLGRLSRFEATQTSLIL 170
#
#
# >AGc215
# Length = 180
#
# Score = 83.6 bits (205), Expect = 3e-16
# Identities = 48/120 (40%), Positives = 68/120 (56%)
#
# Query: 95 TVTLAKSANGHFEVNGRVNGARVHFLVDTGASSVVLSQEDAERAGIDTASLNYSVPIMTA 154
# +V+L GHF R+NG LVDTGAS V +++ A R G SL++ I TA
# Sbjct: 60 SVSLKADERGHFNATFRINGKSFDGLVDTGASMVAINETMARRLGYGVNSLDFKYAISTA 119
#
# Query: 155 NGQARAASITIATLQIGDIERHNVRAMVTKEGLLTGSLLGMNFLQTLGGFTVRGDQLILI 214
# NGQ AA + + ++IG I NV MV K+ L+ L+GM+FL+ L F V G ++ L+
# Sbjct: 120 NGQTLAAHVKLDRVEIGAIRVQNVDTMVLKDNALSNMLVGMSFLKQLSSFKVSGGEMRLV 179
#
#
# >mll3161
# Length = 187
#
# Score = 77.4 bits (189), Expect = 2e-14
# Identities = 46/145 (31%), Positives = 79/145 (53%), Gaps = 2/145 (1%)
#
# Query: 70 DAASRITAGLIPGSPISGMNADGTLTVTLAKSANGHFEVNGRVNGARVHFLVDTGASSVV 129
# +A +++ +P P + + + VT GHF ++NG +V ++DTGA+ V
# Sbjct: 44 EAQPQVSLASVPDRPAAPLPTGRKVAVT--ADGRGHFSTTFKLNGRQVDGMIDTGATLVA 101
#
# Query: 130 LSQEDAERAGIDTASLNYSVPIMTANGQARAASITIATLQIGDIERHNVRAMVTKEGLLT 189
# ++ A R G+ ++S + TANG +AA +TI LQIG I +V+A+V + L+
# Sbjct: 102 VNTSTARRIGLSLNPSDFSHEVNTANGSIKAAVVTIDRLQIGSISVDDVQAIVLDDKALS 161
#
# Query: 190 GSLLGMNFLQTLGGFTVRGDQLILI 214
# +L+GM+FL LG + L+L+
# Sbjct: 162 TNLIGMSFLNRLGKYQAENGTLLLV 186
#
#
# >PA4048
# Length = 214
#
# Score = 73.6 bits (179), Expect = 3e-13
# Identities = 43/113 (38%), Positives = 67/113 (59%)
#
# Query: 86 SGMNADGTLTVTLAKSANGHFEVNGRVNGARVHFLVDTGASSVVLSQEDAERAGIDTASL 145
# +G +A + ++A+ GH+ V G VNG + FLVDTGA+S+ +++ +A R GID
# Sbjct: 84 AGYSAPQRQSFSIARGTGGHYWVAGSVNGQNMQFLVDTGATSIAMNENEARRLGIDYRVD 143
#
# Query: 146 NYSVPIMTANGQARAASITIATLQIGDIERHNVRAMVTKEGLLTGSLLGMNFL 198
# + TA+G +R +T+ ++IG IE V A V + G T +LLGM+FL
# Sbjct: 144 GKPMVASTASGTSRGWRVTLDRVKIGGIELLGVEAAVIEGGYPTEALLGMSFL 196
#
#
# >PA4965
# Length = 174
#
# Score = 63.5 bits (153), Expect = 3e-10
# Identities = 45/133 (33%), Positives = 70/133 (51%), Gaps = 4/133 (3%)
#
# Query: 81 PGSPISGMNADGTLTVTLAKSANGHFEVNGRVNGARVHFLVDTGASSVVLSQEDAERAGI 140
# P ++ DG + + LA S GH+ +NG++NG V FL+DTGA+ V + + A R +
# Sbjct: 40 PNQAPQSIHGDGYVELRLASSRQGHYLLNGQINGQGVTFLLDTGATQVAVPEALAARLAL 99
#
# Query: 141 DTASLNYSVPIMTANGQARAASITIATLQIGDIERHNVRAMVTKEGLLTGSLLGMNFLQT 200
# + + + + TANG+A + LQ+GDI V A++ LLGM+ L+
# Sbjct: 100 ERGA---PITLSTANGRATGWRTRLDQLQLGDIRLSGVAALIAPGMDGDEVLLGMSALKQ 156
#
# Query: 201 LGGFTVRGDQLIL 213
# L FT R L+L
# Sbjct: 157 L-EFTQRDGTLVL 168
#
#
# >SPAC56F8.07
# Length = 507
#
# Score = 33.9 bits (76), Expect = 0.29
# Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
#
# Query: 108 VNGRVNGARVHFLVDTGASSVVLSQEDAERAGIDTASLNYSVPIMTANGQARA-ASITIA 166
# VN +NG +V VD+GA + +LS + AE+ G+ + G A+ + A
# Sbjct: 288 VNVEINGHKVKAFVDSGAQATILSADCAEKCGLTRLLDTRFQGVAKGVGMAKILGCVHSA 347
#
# Query: 167 TLQIGDIERHNVRAMVTKEGLLTGSLLGMNFLQ 199
# L+IGD+ ++ EG LLG++ L+
# Sbjct: 348 PLKIGDLYLPCRFTVI--EGRDVDMLLGLDMLR 378
#
#
# >CC1722
# Length = 332
#
# Score = 31.6 bits (70), Expect = 1.2
# Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
#
# Query: 69 QDAASRITAGLIPGSPISGMNADGTLTVTLAKSANGHFEVNGRVNG-ARVHFLVDTGASS 127
# Q A + T+ IPG +G D + + A ++ V +NG A F+VDTGA
# Sbjct: 26 QAAVASQTSPTIPGGRETGAGEDPLVILDAALDSDARLTVATTINGEAGFRFVVDTGADK 85
#
# Query: 128 VVLSQEDAERAGIDTASLNYSVPIMTANGQARAASITIATLQIGD 172
# VL+ AER + V + A G + + +L+ GD
# Sbjct: 86 TVLTPGLAERLKLPRGP---DVLVHGATGAVTCQTALVRSLRAGD 127
#
#
# >PAE0531
# Length = 116
#
# Score = 31.2 bits (69), Expect = 1.6
# Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
#
# Query: 104 GHFEVNGRVNG----ARVHFLVDTGASSVVLSQEDAERAGIDTASLNYSVPIMTANGQAR 159
# GH V + G LVDTGA+ VL E A++ I+T ++V + NG+
# Sbjct: 2 GHVFVKAKFRGKGEVVYDEILVDTGATFTVLPLEVADKL-IETP---FTVELKLGNGEKV 57
#
# Query: 160 AASITIATLQIGDIERHNVRAMVTKEGLLTGSLLGMNFLQTLG 202
# A + +A +I + R VR + K + ++G++ L+TLG
# Sbjct: 58 VAKVYVAEAEI-EGRRGPVRIVAFKGAI---PVIGVDTLETLG 96
#
#
# >MT3813
# Length = 659
#
# Score = 30.4 bits (67), Expect = 2.8
# Identities = 32/95 (33%), Positives = 42/95 (43%), Gaps = 25/95 (26%)
#
# Query: 92 GTLTVTLAKSANG-HFEVNGRVNG---ARVHFLVDTGASSVVLSQEDAERAGIDTASLNY 147
# GT ++T NG E++G NG A VH L D G D A L+Y
# Sbjct: 525 GTTSITATVKINGVETEISGSGNGPLAAFVHALADV---------------GFDVAVLDY 569
#
# Query: 148 SVPIMTANGQARA-----ASITIAT-LQIGDIERH 176
# M+A A+A AS+TIA+ Q G+ RH
# Sbjct: 570 YEHAMSAGDDAQAAAYVEASVTIASPAQPGEAGRH 604
#
#
# >Rv3710
# Length = 644
#
# Score = 30.4 bits (67), Expect = 2.9
# Identities = 32/95 (33%), Positives = 42/95 (43%), Gaps = 25/95 (26%)
#
# Query: 92 GTLTVTLAKSANG-HFEVNGRVNG---ARVHFLVDTGASSVVLSQEDAERAGIDTASLNY 147
# GT ++T NG E++G NG A VH L D G D A L+Y
# Sbjct: 510 GTTSITATVKINGVETEISGSGNGPLAAFVHALADV---------------GFDVAVLDY 554
#
# Query: 148 SVPIMTANGQARA-----ASITIAT-LQIGDIERH 176
# M+A A+A AS+TIA+ Q G+ RH
# Sbjct: 555 YEHAMSAGDDAQAAAYVEASVTIASPAQPGEAGRH 589
#
#
# >SPCC417.09c
# Length = 767
#
# Score = 29.6 bits (65), Expect = 5.2
# Identities = 19/60 (31%), Positives = 25/60 (41%)
#
# Query: 67 DLQDAASRITAGLIPGSPISGMNADGTLTVTLAKSANGHFEVNGRVNGARVHFLVDTGAS 126
# D+ D A A LI P + +T S N HF N ++ A+VH L D S
# Sbjct: 264 DILDPADNTVASLIHALPPKDITFYLLMTFWQFSSDNNHFYYNTKLFAAKVHHLFDDPTS 323
#
#
# >CT209
# Length = 819
#
# Score = 29.3 bits (64), Expect = 5.9
# Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
#
# Query: 110 GRVNGARVHFLVDTGASSVVLSQEDAERAGIDTASLNYSVP---IMTANGQARAASITIA 166
# G+ +GA V+F + G V ++ D G+ +L P ++T++ Q + I
# Sbjct: 223 GKSSGASVNFATEHGVIEVFTTRPDT-LIGVSFLALAPEHPLVDLLTSDEQKAVVAQYIK 281
#
# Query: 167 TLQIGDIERHNVRAMVTKEGLLTGS 191
# Q ER + M TK G+ TGS
# Sbjct: 282 ETQ-SKSERDRISEMKTKSGVFTGS 305
#
#
# >all7120
# Length = 203
#
# Score = 29.3 bits (64), Expect = 6.1
# Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
#
# Query: 80 IPGSPISGMNADGTLTVTLAKSANGHFEVNGRVNGARVHFLVDTGASSVVLSQEDAERAG 139
# + G+PI A GTLT T N + + G +NG R D G + ++ G
# Sbjct: 44 VNGTPIY---ASGTLTTTDLDPINNSYTIIG-INGKR----TDKGITETIIGLLLPGTYG 95
#
# Query: 140 IDTASLNYSVPIMTANG 156
# ++ LN S P++T NG
# Sbjct: 96 VNDNLLNASQPLLTTNG 112
#
#
# >all5097
# Length = 233
#
# Score = 28.9 bits (63), Expect = 7.9
# Identities = 29/104 (27%), Positives = 47/104 (44%), Gaps = 10/104 (9%)
#
# Query: 75 ITAGLIPGSPISGMNADGTLTVTLAKSANGH--FEVNGRVNGA-RVHFLVDTGASSVVLS 131
# +T L PG P+S N +L V A+ + G +V + GA V FL S + ++
# Sbjct: 113 VTEKLQPGFPVSAENQGVSLAVQSARYSGGDLLLKVKMQNKGADSVRFLY----SFLDVT 168
#
# Query: 132 QEDAERAGIDTASLNYSVPIMTANGQARAASITIATLQIGDIER 175
# + T L +P ANG A +I+I T + D+++
# Sbjct: 169 DDKGRTLSASTEGLPADLP---ANGPAFTGTISIPTALLDDVKK 209
#
#
Database: myva
Posted date: Sep 16, 2002 2:25 PM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.319 0.136 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,314,632
Number of Sequences: 192987
Number of extensions: 993559
Number of successful extensions: 3500
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 3472
Number of HSP's gapped (non-prelim): 58
length of query: 215
length of database: 59,019,183
effective HSP length: 105
effective length of query: 110
effective length of database: 38,755,548
effective search space: 4263110280
effective search space used: 4263110280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
S2: 63 (28.9 bits)