R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|6682235|gb|AAF23287.1|AC016661_12 (AC016661) unknown protein [Arabidopsis
thaliana]
Length = 904
Frame 3 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | || 904
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 291 (102.4 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 54/84 (64%), Positives = 69/84 (82%), Frame = +3
Query: 357 LNL*GRMQAVGRIISQGVYTFSGPFHPFGGAVDIVVVEQQDGTFKSSPWYVRFGKFQGVL 536
++L GR VG +ISQGVY+ + PFHPFGGA+D++VV+QQDG+F+S+PWYVRFGKFQGVL
Sbjct: 1 MSLVGR---VGSLISQGVYSVATPFHPFGGAIDVIVVQQQDGSFRSTPWYVRFGKFQGVL 57
Query: 537 KAREKVVDICVNGVQAGFQMHLDH 608
K EK V I VNG +A F M+LD+
Sbjct: 58 KGAEKFVRISVNGTEADFHMYLDN 81
>gi|9758575|dbj|BAB09188.1| (AB008264) gb|AAF23287.1~gene_id:MBD2.6~strong
similarity to unknown protein [Arabidopsis thaliana]
Length = 930
Frame 3 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | | | 930
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 288 (101.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 57/81 (70%), Positives = 64/81 (79%), Frame = +3
Query: 375 MQAVGRI---ISQGVYTFSGPFHPFGGAVDIVVVEQQDGTFKSSPWYVRFGKFQGVLKAR 545
M AVGRI I +GV T SGPFHPFGGA+DI+VVEQ DGTFKSSPWYVRFGKFQGVLK
Sbjct: 1 MNAVGRIGSYIYRGVGTVSGPFHPFGGAIDIIVVEQPDGTFKSSPWYVRFGKFQGVLKNG 60
Query: 546 EKVVDICVNGVQAGFQMHLDH 608
++ I VNGV +GF M+L H
Sbjct: 61 RNLIRIDVNGVDSGFNMYLAH 81
>gi|7304087|gb|AAF59125.1| (AE003838) CG8709 gene product [Drosophila
melanogaster]
Length = 1102
Frame 3 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | | | 1102
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 168 (59.1 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 33/53 (62%), Positives = 43/53 (81%), Frame = +3
Query: 444 GAVDIVVVEQQDGTFKSSPWYVRFGKFQGVLKAREKVVDICVNGVQAGFQMHL 602
GA+D++VVEQ+DG F+ SP++VRFGK GVL++REKVVDI +NGV QM L
Sbjct: 25 GAIDVIVVEQRDGEFQCSPFHVRFGKL-GVLRSREKVVDIEINGVPVDIQMKL 76
>gi|7662022 ref|NP_055461.1| lipin 2 [Homo sapiens] >gi|11425603
ref|XP_008766.1| lipin 2 [Homo sapiens]
>gi|2495724|sp|Q92539|Y249_HUMAN HYPOTHETICAL PROTEIN KIAA0249
>gi|1665767|dbj|BAA13380.1| (D87436) Similar to Human KIAA0188
protein [Homo sapiens]
Length = 896
Frame 3 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | | 896
0 150 300 450 600 750
Plus Strand HSPs:
Score = 151 (53.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 32/80 (40%), Positives = 50/80 (62%), Frame = +3
Query: 375 MQAVGRIISQGVYTFSGPFH-----PFGGAVDIVVVEQQDGTFKSSPWYVRFGKFQGVLK 539
M VG++ Q + T + G +D++VV+QQDG+++ SP++VRFGK GVL+
Sbjct: 1 MNYVGQLAGQVIVTVKELYKGINQATLSGCIDVIVVQQQDGSYQCSPFHVRFGKL-GVLR 59
Query: 540 AREKVVDICVNGVQAGFQMHL 602
++EKV+DI +NG M L
Sbjct: 60 SKEKVIDIEINGSAVDLHMKL 80
>gi|7505003|pir||T23134 hypothetical protein H37A05.1 - Caenorhabditis elegans
>gi|3878102|emb|CAA16154.1| (AL021346) predicted using
Genefinder~cDNA EST yk9a1.3 comes from this gene~cDNA EST yk9a1.5
comes from this gene~cDNA EST yk54c7.5 comes from this gene~cDNA
EST yk164g10.5 comes from this gene~cDNA EST yk208b12.5 comes from
this gene~cDNA EST yk209f2.>
Length = 823
Frame 3 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | | 823
0 150 300 450 600 750
Plus Strand HSPs:
Score = 150 (52.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 32/70 (45%), Positives = 46/70 (65%), Frame = +3
Query: 396 ISQGVYTFSGPFHP--FGGAVDIVVVEQQDGTFKSSPWYVRFGKFQGVLKAREKVVDICV 569
+ + V F +P GA+D+VVVEQ +G +KS+P++VRFGK+ GV +K VDI V
Sbjct: 7 VFKNVKYFYNSINPATLSGAIDVVVVEQPNGEYKSTPFHVRFGKY-GVFSYSDKYVDIAV 65
Query: 570 NGVQAGFQMHL 602
NGV+ +M L
Sbjct: 66 NGVEIDLKMKL 76
>gi|12584972 ref|NP_075021.1| lipin 3 [Mus musculus]
>gi|12330450|gb|AAG52762.1|AF286724_1 (AF286724) LPIN3 [Mus
musculus]
Length = 848
Frame 3 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | | 848
0 150 300 450 600 750
Plus Strand HSPs:
Score = 149 (52.5 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 29/53 (54%), Positives = 40/53 (75%), Frame = +3
Query: 444 GAVDIVVVEQQDGTFKSSPWYVRFGKFQGVLKAREKVVDICVNGVQAGFQMHL 602
G +D++VV Q+DG+F+ SP++VRFGK GVL++REKVVDI +NG M L
Sbjct: 29 GGIDVLVVRQRDGSFRCSPFHVRFGKL-GVLRSREKVVDIEINGEPVDLHMKL 80
>gi|12584970 ref|NP_075020.1| lipin 2 [Mus musculus]
>gi|12330448|gb|AAG52761.1|AF286723_1 (AF286723) LPIN2 [Mus
musculus]
Length = 893
Frame 3 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | | 893
0 150 300 450 600 750
Plus Strand HSPs:
Score = 148 (52.1 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 28/53 (52%), Positives = 40/53 (75%), Frame = +3
Query: 444 GAVDIVVVEQQDGTFKSSPWYVRFGKFQGVLKAREKVVDICVNGVQAGFQMHL 602
G +D+VVV QQDG+++ SP++VRFGK GVL+++EKV+DI +NG M L
Sbjct: 29 GCIDVVVVRQQDGSYQCSPFHVRFGKL-GVLRSKEKVIDIEINGSAVDLHMKL 80
>gi|7490275|pir||T37941 conserved hypothetical protein SPAC1952.13 - fission
yeast (Schizosaccharomyces pombe) >gi|5731946|emb|CAB52577.1|
(AL109820) conserved hypothetical protein [Schizosaccharomyces
pombe]
Length = 656
Frame 3 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 656
0 150 300 450 600
Plus Strand HSPs:
Score = 144 (50.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 34/76 (44%), Positives = 47/76 (61%), Frame = +3
Query: 375 MQAVGRIISQGVYTFSGPFHP--FGGAVDIVVVEQQDGTFKSSPWYVRFGKFQGVLKARE 548
MQ VGR T++ +P GA+D++VVEQ+D T SP++VRFGKF +L + +
Sbjct: 1 MQYVGRAFDSVTKTWNA-INPSTLSGAIDVIVVEQEDKTLACSPFHVRFGKFSLLLPS-D 58
Query: 549 KVVDICVNGVQAGFQMHL 602
K V+ VNG GF M L
Sbjct: 59 KKVEFSVNGQLTGFNMKL 76
>gi|2495714|sp|Q14693|Y188_HUMAN HYPOTHETICAL PROTEIN KIAA0188
>gi|1136436|dbj|BAA11505.1| (D80010) KIAA0188 [Homo sapiens]
Length = 899
Frame 3 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | | 899
0 150 300 450 600 750
Plus Strand HSPs:
Score = 142 (50.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/85 (37%), Positives = 49/85 (57%), Frame = +3
Query: 348 LDTLNL*GRMQAVGRIISQGVYTFSGPFHPFGGAVDIVVVEQQDGTFKSSPWYVRFGKFQ 527
+ T+N G++ + + +Y P G +DI+V+ Q +G + SP++VRFGK
Sbjct: 7 VQTMNYVGQLAGQVFVTVKELYKGLNPA-TLSGCIDIIVIRQPNGNLQCSPFHVRFGKM- 64
Query: 528 GVLKAREKVVDICVNGVQAGFQMHL 602
GVL++REKVVDI +NG M L
Sbjct: 65 GVLRSREKVVDIEINGESVDLHMKL 89
>gi|7656875 ref|NP_056578.1| lipin 1; fatty liver dystrophy [Mus musculus]
>gi|7264655|gb|AAF44296.1|AF180471_1 (AF180471) Lpin1 [Mus
musculus]
Length = 891
Frame 3 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | | 891
0 150 300 450 600 750
Plus Strand HSPs:
Score = 140 (49.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 34/80 (42%), Positives = 49/80 (61%), Frame = +3
Query: 375 MQAVGRIISQGVYT----FSGPFHP--FGGAVDIVVVEQQDGTFKSSPWYVRFGKFQGVL 536
M VG++ Q T + G +P G +DI+V+ Q +G+ + SP++VRFGK GVL
Sbjct: 1 MNYVGQLAGQVFVTVKELYKG-LNPATLSGCIDIIVIRQPNGSLQCSPFHVRFGKM-GVL 58
Query: 537 KAREKVVDICVNGVQAGFQMHL 602
++REKVVDI +NG M L
Sbjct: 59 RSREKVVDIEINGESVDLHMKL 80
>gi|9581794|emb|CAC00516.1| (AL132654) dJ450M14.2 (novel protein similar to
KIAA0188, KIAA0249 and yeast SMP2) [Homo sapiens]
Length = 438
Frame 3 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | 438
0 150 300
Plus Strand HSPs:
Score = 132 (46.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/53 (52%), Positives = 39/53 (73%), Frame = +3
Query: 444 GAVDIVVVEQQDGTFKSSPWYVRFGKFQGVLKAREKVVDICVNGVQAGFQMHL 602
G +D++VV+Q DG+F+ SP++VRFGK GVL++REKV DI +NG M L
Sbjct: 29 GGIDVLVVKQVDGSFRCSPFHVRFGKL-GVLRSREKV-DIELNGEPVDLHMKL 79
>gi|6323817 ref|NP_013888.1| involved in respiration and plasmid maintenance;
Smp2p [Saccharomyces cerevisiae] >gi|417782|sp|P32567|SMP2_YEAST
SMP2 PROTEIN >gi|320853|pir||S30911 SMP2 protein - yeast
(Saccharomyces cerevisiae) >gi|218488|dbj|BAA00880.1| (D01095) Smp2
protein [Saccharomyces cerevisiae] >gi|825570|emb|CAA89801.1|
(Z49705) Smp2p [Saccharomyces cerevisiae] >gi|445061|prf||1908378A
SMP2 gene [Saccharomyces cerevisiae]
Length = 862
Frame 3 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | | 862
0 150 300 450 600 750
Plus Strand HSPs:
Score = 135 (47.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/76 (42%), Positives = 45/76 (59%), Frame = +3
Query: 375 MQAVGRIISQGVYTFSGPFHP--FGGAVDIVVVEQQDGTFKSSPWYVRFGKFQGVLKARE 548
MQ VGR + T+S +P GA+D++VVE DG SP++VRFGKFQ +LK +
Sbjct: 1 MQYVGRALGSVSKTWSS-INPATLSGAIDVIVVEHPDGRLSCSPFHVRFGKFQ-ILKPSQ 58
Query: 549 KVVDICVNGVQAGFQMHL 602
K V + +N + M L
Sbjct: 59 KKVQVFINEKLSNMPMKL 76
>gi|7340799|emb|CAB10579.2| (Z97348) PFC0150w (MAL3P1.12), Human hypothetical
protein KIAA0249-related protein len: 1156 aa; Similarity to 2
human and a yeast hypothetical gene. Human hypothetical protein
KIAA0249 (SW:Y249_HUMAN). BLAST score: 2185, sum P(2) = 4.3e-74,
revised pr>
Length = 1156
Frame 3 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | | | | 1156
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 94 (33.1 bits), Expect = 1.9, P = 0.85
Identities = 25/81 (30%), Positives = 42/81 (51%), Frame = +3
Query: 387 GRIISQGVYTFSGPFHPFGGAVDIVVVEQQ----------DGTFKSSPWYVRFGKFQGVL 536
G+I+S G +DI+ +E + + +KS+P++VRFGK + +L
Sbjct: 12 GKIVSSVSNALDFNQATLSGCIDIICIESEIENKLKNDKIEVIYKSTPFHVRFGKTK-LL 70
Query: 537 KAREKVVDICVNGVQAGFQMHL 602
+++EK+V I VNG M L
Sbjct: 71 RSKEKIVSILVNGKSTNLHMKL 92
>gi|7494190|pir||T18423 hypothetical protein C0150w - malaria parasite
(Plasmodium falciparum)
Length = 1169
Frame 3 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | | | | 1169
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 94 (33.1 bits), Expect = 1.9, P = 0.85
Identities = 25/81 (30%), Positives = 42/81 (51%), Frame = +3
Query: 387 GRIISQGVYTFSGPFHPFGGAVDIVVVEQQ----------DGTFKSSPWYVRFGKFQGVL 536
G+I+S G +DI+ +E + + +KS+P++VRFGK + +L
Sbjct: 28 GKIVSSVSNALDFNQATLSGCIDIICIESEIENKLKNDKIEVIYKSTPFHVRFGKTK-LL 86
Query: 537 KAREKVVDICVNGVQAGFQMHL 602
+++EK+V I VNG M L
Sbjct: 87 RSKEKIVSILVNGKSTNLHMKL 108
>gi|1170404|sp|P42145|HSP1_PSECU SPERM PROTAMINE P1 >gi|598345|gb|AAA74602.1|
(L35334) protamine P1 [Pseudochirops cupreus]
Length = 69
Frame -3 hits (HSPs): _____________________________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | 69
0 20 40 60
__________________
Annotated Domains:
BLOCKS BL00048: Protamine P1 proteins. 1..27
PFAM protamine_P1: Protamine P1 1..66
PRODOM PD001830: HSP1(29) VE2(21) GAG(12) 6..65
PROSITE PROTAMINE_P1: Protamine P1 signature. 2..13
__________________
Minus Strand HSPs:
Score = 64 (22.5 bits), Expect = 4.3, P = 0.99
Identities = 17/40 (42%), Positives = 24/40 (60%), Frame = -3
Query: 199 RFRAQRKKEVIKFENRY*RRRSGSVRRRSDRGRK---CLSRR 83
R+R +R++ ++ R RRR RRR RGR+ CL RR
Sbjct: 14 RYRRRRRRRRSRYRGR--RRRYRRSRRRRRRGRRRGNCLGRR 53
>gi|7672349|gb|AAF66444.1|AF132733_1 (AF132733) unknown [Homo sapiens]
Length = 555
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | 555
0 150 300 450
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 5.0, P = 0.99
Identities = 25/79 (31%), Positives = 37/79 (46%), Frame = +1
Query: 19 KQAAGSNGAKRTXESEKRAPH-PAATGTSFPDHFFVLHCRIASFNIYSQI*SLPFFFVLG 195
KQ A NG T +K A H P T P + F++H I+S S+ SL F +
Sbjct: 151 KQEAKENGTNLTFIGDKTAMHEPLQTWQDAP-YIFIVHIGISSSKESSKENSLSNLFTMT 209
Query: 196 IETKYPFSLTVIHNSAIHIF 255
+E K P+ + + + IF
Sbjct: 210 VEVKGPYEYLTLEDYPLMIF 229
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.99
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.341 0.153 0.498
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.344 0.151 0.532
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.355 0.159 0.570
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.340 0.152 0.505
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.350 0.154 0.554
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.339 0.149 0.504
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 203 202 10. 77 3 12 22 0.095 35
31 0.11 38
+2 0 203 203 10. 77 3 12 22 0.095 35
31 0.11 38
+1 0 204 203 10. 77 3 12 22 0.095 35
31 0.11 38
-1 0 204 203 10. 77 3 12 22 0.095 35
31 0.11 38
-2 0 203 202 10. 77 3 12 22 0.095 35
31 0.11 38
-3 0 203 202 10. 77 3 12 22 0.095 35
31 0.11 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 16
No. of states in DFA: 592 (58 KB)
Total size of DFA: 223 KB (256 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 211.54u 1.14s 212.68t Elapsed: 00:00:42
Total cpu time: 211.58u 1.16s 212.74t Elapsed: 00:00:42
Start: Thu Jan 17 17:17:50 2002 End: Thu Jan 17 17:18:32 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000