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Finding cDNAs
UGID:908304     UniGene Hs.517557     Homo sapiens (human)   PATZ1 Order cDNA clone, Links
CDNA FLJ76669 complete cds, highly similar to Homo sapiens zinc finger protein 278 (ZNF278), transcript variant 4, mRNA (PATZ1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_055138.2 POZ (BTB) and AT hook containing zinc finger 1 long C isoform H. sapiens 100.0 686
XP_543491.2 PREDICTED: similar to zinc finger protein 278 long C isoform isoform 1 C. lupus familiaris 99.7 686
NP_062520.1 POZ (BTB) and AT hook containing zinc finger 1 M. musculus 99.7 640
NP_001100701.1 zinc finger protein 278 R. norvegicus 99.7 640
XP_001497029.2 PREDICTED: POZ (BTB) and AT hook containing zinc finger 1 isoform 2 E. caballus 99.7 640
XP_001252557.1 PREDICTED: similar to POZ (BTB) and AT hook containing zinc finger 1 long C isoform 1 B. taurus 99.6 686
XP_688779.2 PREDICTED: similar to transcription factor MAZR D. rerio 78.5 610
NP_001082470.1 Myc-associated zinc finger protein X. laevis 69.5 262

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; lung; intestine; mixed; pharynx; lymph; eye; embryonic tissue; skin; ovary; lymph node; muscle; placenta; mammary gland; liver; pancreas; uterus; vascular; prostate; thyroid; thymus; adrenal gland; testis; trachea; blood; bladder; stomach; connective tissue; heart; bone; kidney; parathyroid; ear; epididymis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q12.2
UniSTS entry: Chr 22 RH78526
UniSTS entry: Chr 22 RH26916
UniSTS entry: Chr 22 HSC2NE092
UniSTS entry: Chr 22 STS-AA015988 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (17)

AL096880.1 Novel human mRNA containing Zinc finger C2H2 type domains P
BC051357.1 Homo sapiens zinc finger protein 278, mRNA (cDNA clone IMAGE:6598836), partial cds PA
AK123441.2 Homo sapiens cDNA FLJ41447 fis, clone BRSTN2004869
AF119256.1 Homo sapiens PATZ (PATZ) mRNA, complete cds PA
CR456613.1 Homo sapiens ZNF278 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.ZNF278) P
AB208787.1 Homo sapiens mRNA for zinc finger protein 278 long A isoform variant protein P
AF254082.1 Homo sapiens zinc finger sarcoma gene short isoform (ZSG) mRNA, complete cds PA
AF254083.1 Homo sapiens zinc finger sarcoma gene long A isoform (ZSG) mRNA, complete cds PA
AF254084.1 Homo sapiens zinc finger sarcoma gene long B isoform (ZSG) mRNA, complete cds PA
AF254085.1 Homo sapiens zinc finger sarcoma gene long C isoform (ZSG) mRNA, complete cds PA
NM_014323.2 Homo sapiens POZ (BTB) and AT hook containing zinc finger 1 (PATZ1), transcript variant 1, mRNA P
NM_032052.1 Homo sapiens POZ (BTB) and AT hook containing zinc finger 1 (PATZ1), transcript variant 3, mRNA P
NM_032051.1 Homo sapiens POZ (BTB) and AT hook containing zinc finger 1 (PATZ1), transcript variant 4, mRNA PA
NM_032050.1 Homo sapiens POZ (BTB) and AT hook containing zinc finger 1 (PATZ1), transcript variant 2, mRNA P
AY028384.1 Homo sapiens BTB-POZ domain zinc finger transcription factor (RIAZ) mRNA, complete cds P
BC021091.1 Homo sapiens POZ (BTB) and AT hook containing zinc finger 1, mRNA (cDNA clone MGC:31750 IMAGE:4857537), complete cds PA
AK291803.1 Homo sapiens cDNA FLJ76669 complete cds, highly similar to Homo sapiens zinc finger protein 278 (ZNF278), transcript variant 4, mRNA P

EST sequences (244)

AA971471.1 Clone IMAGE:1583249 mixed 3' read
AI004162.1 Clone IMAGE:1631789 mammary gland 3' read
T05763.1 Clone HFBDF94 brain P
AI031748.1 Clone IMAGE:1649198 parathyroid 3' read A
AI032116.1 Clone IMAGE:1611260 uncharacterized tissue 3' read
AI032784.1 Clone IMAGE:1647055 parathyroid 3' read
AA928586.1 Clone IMAGE:1552958 uncharacterized tissue 3' read A
AI122951.1 Clone IMAGE:1509504 mixed 3' read
BX108066.1 Clone IMAGp998K17112_;_IMAGE:121096 mixed
AI206677.1 Clone IMAGE:1756519 lung 3' read A
CB114052.1 Clone L3SNU475s1-6-H05 liver 5' read A
AI270634.1 Clone IMAGE:1978988 stomach 3' read
AI291756.1 Clone IMAGE:1895578 lung 3' read
AI342861.1 Clone IMAGE:1909690 lung 3' read
AI348681.1 Clone IMAGE:1909590 lung 3' read
AI382574.1 Clone IMAGE:2020463 brain 3' read A
AI453024.1 Clone IMAGE:2145078 mixed 3' read
AI625250.1 Clone IMAGE:2231278 uterus 3' read
AI633731.1 Clone IMAGE:2124153 mixed 3' read A
AI652434.1 Clone IMAGE:2307070 uncharacterized tissue 3' read
AI656081.1 Clone IMAGE:2243542 uncharacterized tissue 3' read A
AI587571.1 Clone IMAGE:2221956 pancreas 3' read
AI743385.1 Clone IMAGE:2372588 mixed 3' read
AI799293.1 Clone IMAGE:2263637 uterus 3' read
AI807017.1 Clone IMAGE:2357749 mixed 3' read
AI912010.1 Clone IMAGE:2337752 lung 3' read
BX326598.2 Clone CS0DD002YA11 uncharacterized tissue 3' read
BX344912.1 Clone CS0DD002YA11 uncharacterized tissue 3' read
BX365893.2 Clone CS0DD002YA11 uncharacterized tissue 5' read P
BX333577.2 Clone CS0DC027YJ15 uncharacterized tissue 5' read P
BX389268.2 Clone CS0DC027YJ15 uncharacterized tissue 5' read P
BX326756.2 Clone CS0DB004YJ01 uncharacterized tissue 5' read P
BX326757.2 Clone CS0DB004YJ01 uncharacterized tissue 5' read P
BX326581.2 Clone CS0DB004YJ01 uncharacterized tissue 3' read P
BX409567.2 Clone CS0DF021YB10 brain 5' read
BX409606.2 Clone CS0DF037YM06 brain 5' read P
BX431905.2 Clone CS0DM007YH03 liver 5' read P
AI961236.1 Clone IMAGE:2507527 uterus 3' read
CD252380.1 Clone IMAGE:30375424 brain 5' read P
BX453682.1 Clone CS0DM007YH03 liver 3' read
AW021549.1 Clone IMAGE:2484410 ear 5' read A
AW024580.1 Clone IMAGE:2526095 kidney 3' read A
BX508585.1 Clone DKFZp686J12271 muscle 5' read P
F06998.1 Clone c-1sa03 brain P
F03274.1 Clone c-1sa03 brain 3' read A
AW104691.1 Clone IMAGE:2596636 ovary 3' read
CF136766.1 Clone IMAGE:3093411 lymph node 5' read
AW139368.1 Clone IMAGE:2717476 mixed 3' read A
Z44805.1 Clone c-29f05 brain
Z40599.1 Clone c-29f05 brain 3' read
F07999.1 Clone c-2ne09 brain P
Z41074.1 Clone c-2ne09 brain 3' read A
AW195994.1 Clone IMAGE:2681567 pancreas 3' read
AI905303.1 mammary gland P
CF552957.1 Clone IMAGE:30529590 muscle 5' read P
AW297014.1 Clone IMAGE:2731449 uncharacterized tissue 3' read A
R68510.1 Clone IMAGE:137745 placenta 5' read
AW498833.1 brain 5' read P
AW499988.1 Clone IMAGE:3077005 lymph node 5' read PM
CD633582.1 uncharacterized tissue P
CD633583.1 uncharacterized tissue P
AW589781.1 Clone IMAGE:2946324 uncharacterized tissue 3' read
AW672708.1 Clone IMAGE:2899909 placenta 5' read P
AW956087.1 uncharacterized tissue
CN342128.1 embryonic tissue 5' read P
CN342129.1 embryonic tissue 5' read P
CN388335.1 embryonic tissue 5' read P
CN388337.1 embryonic tissue 5' read P
CN388338.1 embryonic tissue 5' read P
CN388339.1 embryonic tissue 5' read
CN388340.1 embryonic tissue 5' read P
CN388341.1 embryonic tissue 5' read P
CN413058.1 embryonic tissue 5' read
H16826.1 Clone IMAGE:50682 brain 3' read A
H16934.1 Clone IMAGE:50682 brain 5' read P
BE185816.1 pharynx
BE265457.1 Clone IMAGE:3537027 lung 5' read
BE268977.1 Clone IMAGE:3542017 lymph 5' read P
BE277017.1 Clone IMAGE:3051047 skin 5' read P
BE277693.1 Clone IMAGE:2966849 skin 5' read
BE463496.1 Clone IMAGE:3183856 kidney 3' read A
CV574346.1 Clone oe23b10 eye 5' read P
H43421.1 Clone IMAGE:186933 mammary gland 3' read A
BE696550.1 intestine P
BE696577.1 intestine P
BE696578.1 intestine P
BE696580.1 intestine P
BE696600.1 intestine
BE696605.1 intestine
BE696610.1 intestine P
BE696631.1 intestine P
BE744394.1 Clone IMAGE:3837586 ovary 5' read P
AV687793.2 Clone GKCGQG11 liver 5' read
BE870023.1 Clone IMAGE:3853410 intestine 5' read P
DN995693.1 Clone TC110321 mammary gland 5' read P
DN996337.1 Clone TC110320 mammary gland 5' read P
DN999974.1 Clone TC124801 vascular 5' read P
DR001550.1 Clone TC102436 brain 5' read P
AV728652.1 Clone HTCALE02 brain 5' read A
AV728997.1 Clone HTCALG02 brain 5' read A
DR159466.1 Clone IMAGE:7968700 embryonic tissue 5' read
D52513.1 Clone GEN-080D10 brain 5' read
BF083012.1 intestine P
CT004806.1 Clone RZPDp9016L0825 uncharacterized tissue 5' read P
BF337158.1 Clone IMAGE:4182623 brain 5' read
BF342162.1 Clone IMAGE:4148719 brain 5' read P
DA143948.1 Clone BRAMY1000368 brain 5' read P
DA000071.1 Clone 3NB691000084 uncharacterized tissue 5' read P
DA289268.1 Clone BRHIP2000295 brain 5' read P
DA075055.1 Clone BRACE2026759 brain 5' read P
DA259983.1 Clone BRCAN2011856 brain 5' read P
DA630263.1 Clone KIDNE2011396 kidney 5' read P
AW372944.1 mammary gland P
AW603748.1 intestine
DA359124.1 Clone BRSTN2004869 brain 5' read
BF058822.1 Clone IMAGE:3477432 ovary 3' read P
BF061601.1 Clone IMAGE:3389910 mixed 3' read
DB003434.1 Clone TBAES2005885 mammary gland 5' read P
DA884655.1 Clone PUAEN2004553 vascular 5' read P
H77721.1 Clone IMAGE:233447 mixed 5' read
H77722.1 Clone IMAGE:233447 mixed 3' read
DB011293.1 Clone TCOLN2002515 intestine 5' read P
DA926128.1 Clone SMINT2013022 intestine 5' read P
DA999865.1 Clone TBAES2001392 mammary gland 5' read P
BF529077.1 Clone IMAGE:4178060 brain 5' read
BF530716.1 Clone IMAGE:4214985 brain 5' read P
DA866272.1 Clone PROST2000896 prostate 5' read P
BF594249.1 Clone IMAGE:3564410 brain 3' read P
DA868669.1 Clone PROST2004135 prostate 5' read P
BF794653.1 Clone IMAGE:4339258 lymph 5' read P
DB382353.1 Clone THYRO1001295 thyroid 3' read
DB310551.1 Clone BRSTN2004869 brain 3' read
DB155214.1 Clone THYMU3033469 thymus 5' read P
BF737801.1 bladder
DB349388.1 Clone TRACH3011094 trachea 3' read A
DB140546.1 Clone THYMU3013582 thymus 5' read
DB134648.1 Clone THYMU3005337 thymus 5' read
DB294816.1 Clone 3NB691000084 uncharacterized tissue 3' read
BF969762.1 Clone IMAGE:4360268 adrenal gland 5' read P
BF939688.1 Clone IMAGE:3440571 brain 3' read P
BF939951.1 Clone IMAGE:3439279 brain 3' read P
BF887836.1 testis
BF891753.1 blood
T34237.1 blood 5' read P
BF869034.1 lung
AL519464.3 Clone CS0DB004YJ01 uncharacterized tissue 3' read
AL519465.3 Clone CS0DB004YJ01 uncharacterized tissue 5' read P
AL529166.3 Clone CS0DD002YA11 uncharacterized tissue 5' read P
AL538814.3 Clone CS0DF037YM06 brain 3' read
AL538815.3 Clone CS0DF037YM06 brain 5' read P
AL564490.3 Clone CS0DM007YH03 liver 3' read
AL564564.3 Clone CS0DM007YH03 liver 5' read P
BG331909.1 Clone IMAGE:4550824 lung 5' read P
BG489253.1 Clone IMAGE:4636697 lung 5' read P
N47975.1 Clone IMAGE:281495 brain 3' read A
BG678752.1 Clone IMAGE:4749715 skin 5' read P
BG747116.1 Clone IMAGE:4857537 intestine 5' read P
BG766711.1 Clone IMAGE:4869816 skin 5' read P
BG913156.1 Clone IMAGE:4943685 brain 5' read P
N74128.1 Clone IMAGE:298426 lung 3' read A
BG950516.1 intestine P
N89741.1 Clone IMAGE:302001 lung 3' read A
BI550975.1 Clone IMAGE:5275198 brain 5' read P
BI833667.1 Clone IMAGE:5227482 mixed 5' read
BI914795.1 Clone IMAGE:5248125 brain 5' read P
BI914800.1 Clone IMAGE:5248127 brain 5' read P
W04522.1 Clone IMAGE:320364 parathyroid 3' read
BM463508.1 Clone IMAGE:5585917 uncharacterized tissue 5' read P
W31747.1 Clone IMAGE:320364 parathyroid 5' read
BM545148.1 Clone IMAGE:5588960 ovary 5' read P
BM669662.1 Clone UI-E-DX1-agw-k-24-0-UI eye 3' read A
BM669782.1 Clone UI-E-DX1-agx-g-07-0-UI eye 3' read A
BM670946.1 Clone UI-E-DW1-ahe-m-14-0-UI eye 3' read A
BM682121.1 Clone UI-E-EO1-aiw-n-11-0-UI eye 3' read A
BM695119.1 Clone UI-E-CL1-aez-j-17-0-UI eye 5' read A
BM698876.1 Clone UI-E-DX1-agw-k-24-0-UI eye 5' read
BM709051.1 Clone UI-E-CQ1-afx-f-24-0-UI brain 5' read P
BM717404.1 Clone UI-E-EJ0-ahm-i-08-0-UI eye 5' read A
BM832187.1 Clone S20T665307-37-H10 stomach 5' read
BM893834.1 Clone IMAGE:6136554 pancreas 3' read
BM893999.1 Clone IMAGE:6136563 pancreas 3' read
BM970700.1 Clone UI-CF-EC1-acj-k-05-0-UI lung 3' read A
BM972455.1 Clone UI-CF-EC1-abq-j-23-0-UI lung 3' read A
BM976210.1 Clone UI-CF-EN1-acy-m-11-0-UI lung 3' read A
BM993067.1 Clone IMAGE:5865304 connective tissue 3' read A
BM998085.1 Clone IMAGE:5885730 connective tissue 3' read A
BQ002067.1 Clone IMAGE:5843024 connective tissue 3' read A
BQ006095.1 Clone IMAGE:5845796 connective tissue 3' read A
W94788.1 Clone IMAGE:358107 heart 3' read
W95303.1 Clone IMAGE:358107 heart 5' read
BQ071738.1 Clone IMAGE:5928192 brain 5' read P
BQ188512.1 Clone UI-E-EJ1-ajw-h-06-0-UI eye 5' read A
BQ212121.1 Clone IMAGE:6044439 uncharacterized tissue 5' read P
BQ213724.1 Clone IMAGE:6044748 uncharacterized tissue 5' read A
BQ223974.1 Clone IMAGE:6042761 uncharacterized tissue 5' read P
BQ227363.1 Clone IMAGE:6059368 lung 5' read
BQ317732.1 intestine
AA015988.1 Clone IMAGE:360702 eye 3' read
AA016096.1 Clone IMAGE:360702 eye 5' read P
BQ333156.1 lung
AA024783.1 Clone IMAGE:364967 heart 3' read A
BQ420709.1 Clone IMAGE:6013810 uncharacterized tissue 5' read P
BQ574722.1 Clone UI-H-EZ1-bba-n-18-0-UI bone 3' read A
BQ636113.1 Clone hd04e08 eye 5' read P
BQ644979.1 Clone IMAGE:6297384 liver 5' read P
BQ647327.1 Clone IMAGE:6270153 liver 5' read P
BQ687356.1 Clone IMAGE:6206603 pancreas 5' read P
BQ893045.1 Clone IMAGE:6209864 pancreas 5' read P
BQ940747.1 Clone IMAGE:6374289 lung 5' read P
BQ953327.1 Clone IMAGE:6428581 lung 5' read P
BU187097.1 Clone IMAGE:6142370 eye 5' read
BU193886.1 Clone IMAGE:6151659 skin 5' read
BU154584.1 Clone IMAGE:6155197 uterus 5' read P
BU150344.1 Clone IMAGE:6340131 brain 5' read P
BU527414.1 Clone IMAGE:6537215 lung 5' read P
N89554.1 brain A
BU631058.1 Clone UI-H-FE1-bdt-j-13-0-UI bone 3' read A
BU631086.1 Clone UI-H-FE1-bdt-p-13-0-UI bone 3' read A
BU620174.1 Clone UI-H-FL1-bfw-i-07-0-UI bone 3' read A
BU682218.1 Clone UI-CF-EC1-acb-b-08-0-UI lung 3' read A
BU682710.1 Clone UI-CF-EC1-aci-g-16-0-UI lung 3' read A
BU732510.1 Clone UI-E-CQ1-afx-f-24-0-UI brain 3' read A
BU850113.1 Clone IMAGE:6598885 ovary 5' read P
BU963722.1 Clone IMAGE:6745043 mixed 5' read A
CA445100.1 Clone UI-H-DT1-awn-b-20-0-UI connective tissue 3' read A
CA487410.1 Clone IMAGE:6718505 mixed 5' read
AA336164.1 epididymis 5' read
AA356468.1 blood 5' read
AA446958.1 Clone IMAGE:783776 embryonic tissue 3' read A
AA448571.1 Clone IMAGE:785941 embryonic tissue 5' read P
AA449718.1 Clone IMAGE:785941 embryonic tissue 3' read A
AA287388.1 Clone IMAGE:700927 lymph node 3' read A
AA287493.1 Clone IMAGE:700927 lymph node 5' read
AA578835.1 Clone IMAGE:980163 lung 3' read
AA612838.1 Clone IMAGE:1145141 intestine 3' read A
T96535.1 Clone IMAGE:121096 mixed 5' read
T97144.1 Clone IMAGE:121144 mixed 5' read
AA688062.1 Clone IMAGE:1233998 lymph node 3' read A
AA742535.1 Clone IMAGE:1257584 uncharacterized tissue 3' read A
AA813199.1 Clone 1377177 testis 3' read
AA858391.1 Clone IMAGE:1475204 pharynx 3' read
AA936068.1 Clone IMAGE:1571029 uncharacterized tissue 3' read A
AA862934.1 Clone IMAGE:1456303 kidney 3' read
AA953192.1 Clone IMAGE:1591975 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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