R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 49 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|9758306|dbj|BAB08780.1| (AB011482) GS1-like protein [Arabidopsis thaliana]
Length = 220
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 220
0 50 100 150 200
Plus Strand HSPs:
Score = 776 (273.2 bits), Expect = 4.4e-76, P = 4.4e-76
Identities = 143/179 (79%), Positives = 164/179 (91%), Frame = +1
Query: 133 MDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDSLSAE 312
MDGLLLDTE+FYT+VQEIILAR+NK FDWSLKAKMMG+KAIE+ARIFVEE+GISDSLSAE
Sbjct: 1 MDGLLLDTEKFYTEVQEIILARFNKKFDWSLKAKMMGRKAIEAARIFVEESGISDSLSAE 60
Query: 313 QFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRHHEIFS 492
FLVERE ML+ LFPTSE MPGASRL+ HLH K +P+C+ATG+H RH++LKTQRH E+FS
Sbjct: 61 DFLVERESMLQDLFPTSELMPGASRLIKHLHVKNIPICIATGTHTRHYDLKTQRHRELFS 120
Query: 493 LMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKNAGMS 669
LMHHVV GDDPEVKQGKP+PDGFLAAA+RF+ GPVD +LVFEDAP+GVLAAKNAGM+
Sbjct: 121 LMHHVVRGDDPEVKQGKPAPDGFLAAARRFKDGPVDSQKVLVFEDAPSGVLAAKNAGMN 179
>gi|7445122|pir||T04238 hypothetical protein F14M19.120 - Arabidopsis thaliana
>gi|4539302|emb|CAB39605.1| (AL049480) putative protein
[Arabidopsis thaliana] >gi|7269435|emb|CAB79439.1| (AL161564)
putative protein [Arabidopsis thaliana]
Length = 221
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 775 (272.8 bits), Expect = 5.6e-76, P = 5.6e-76
Identities = 141/179 (78%), Positives = 165/179 (92%), Frame = +1
Query: 133 MDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDSLSAE 312
MDGLLLDTE+FYT+VQE ILARYNKTFDWSLKAKMMG+KAIE+AR+FV+E+GISDSLSAE
Sbjct: 1 MDGLLLDTEKFYTEVQEKILARYNKTFDWSLKAKMMGRKAIEAARLFVDESGISDSLSAE 60
Query: 313 QFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRHHEIFS 492
F+VERE ML+ LFPTS+ MPGASRL+ HLH KG+P+C+ATG+H RHF+LKTQRH E+FS
Sbjct: 61 DFIVERESMLQDLFPTSDLMPGASRLLRHLHGKGIPICIATGTHTRHFDLKTQRHRELFS 120
Query: 493 LMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKNAGMS 669
LMHHVV GDDPEVK+GKP+PDGFLAA++RFE GPVDP +LVFEDAP+GV AAKNAGM+
Sbjct: 121 LMHHVVRGDDPEVKEGKPAPDGFLAASRRFEDGPVDPRKVLVFEDAPSGVQAAKNAGMN 179
>gi|12743333 ref|XP_010289.2| DNA segment, numerous copies, expressed probes
(GS1 gene) [Homo sapiens]
Length = 225
Frame 1 hits (HSPs): __________________________________________
__________________________________________________
Database sequence: | | | | | | 225
0 50 100 150 200
Plus Strand HSPs:
Score = 482 (169.7 bits), Expect = 6.3e-45, P = 6.3e-45
Identities = 95/187 (50%), Positives = 128/187 (68%), Frame = +1
Query: 106 RPITHVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEET 285
+P+TH++FDMDGLLLDTER Y+ V + I RY+K + W +K+ +MGKKA+E+A+I ++
Sbjct: 3 QPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVL 62
Query: 286 GISDSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELK 465
+ +S E+ + E + L+++FPT+ MPGA +L+ HL G+P +AT S F++K
Sbjct: 63 QLP--MSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMK 120
Query: 466 TQRHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVL 645
T RH E FSL H+VLGDDPEV+ GKP PD FLA AKRF P LVFEDAP GV
Sbjct: 121 TSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPA-MEKCLVFEDAPNGVE 179
Query: 646 AAKNAGM 666
AA AGM
Sbjct: 180 AALAAGM 186
>gi|6912346 ref|NP_036212.1| DNA segment, numerous copies, expressed probes
(GS1 gene) [Homo sapiens] >gi|729635|sp|Q08623|GS1_HUMAN GS1
PROTEIN >gi|183653|gb|AAA58622.1| (M86934) Gene from Xp22.3 which
escapes X-inactivation. Function unknown [Homo sapiens]
Length = 214
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 214
0 50 100 150 200
Plus Strand HSPs:
Score = 436 (153.5 bits), Expect = 4.7e-40, P = 4.7e-40
Identities = 89/178 (50%), Positives = 118/178 (66%), Frame = +1
Query: 133 MDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDSLSAE 312
MDGLLLDTER Y+ V + I RY+K + W +K+ +MGKKA+E+A+I ++ + +S E
Sbjct: 1 MDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLP--MSKE 58
Query: 313 QFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRHHEIFS 492
+ + E + L+++FP + MPGA +L+ HL G+P +AT S F++KT RH E FS
Sbjct: 59 ELVEESQTKLKEVFPMAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFS 118
Query: 493 LMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKNAGM 666
L H+VLGDDPEV+ GKP PD FLA AKRF P LVFEDAP GV AA AGM
Sbjct: 119 LFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPA-MEKCLVFEDAPNGVEAALAAGM 175
>gi|7295702|gb|AAF51007.1| (AE003576) Gs1l gene product [Drosophila
melanogaster]
Length = 231
Frame 1 hits (HSPs): __________________________________________
__________________________________________________
Database sequence: | | | | | | 231
0 50 100 150 200
Plus Strand HSPs:
Score = 428 (150.7 bits), Expect = 3.3e-39, P = 3.3e-39
Identities = 95/189 (50%), Positives = 120/189 (63%), Frame = +1
Query: 100 VRRPITHVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVE 279
V R +TH VFDMDGLLLDTER YT E+IL Y KT+ + +K ++MG + AR VE
Sbjct: 5 VLRKVTHCVFDMDGLLLDTERLYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVE 64
Query: 280 ETGISDSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFE 459
+ +S E++ ++ E L ++ MPGA RL+ HLHA VP C+AT S E
Sbjct: 65 HYELP--MSWEEYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVE 122
Query: 460 LKTQRHHEIFSLMHHVVLGD-DPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPA 636
LKT +H E+FSL +H V G D EV GKP+PD FL AA RF G P PS+ LVFED+P
Sbjct: 123 LKTAQHRELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRF-GVPPKPSDCLVFEDSPN 181
Query: 637 GVLAAKNAGM 666
GV AA +AGM
Sbjct: 182 GVTAANSAGM 191
>gi|3023906|sp|Q94529|GS1_DROME GS1-LIKE PROTEIN >gi|7445114|pir||JC6201 GS1
protein homolog - fruit fly (Drosophila melanogaster)
>gi|1575558|gb|AAC47470.1| (U66356) GS1-like protein [Drosophila
melanogaster] >gi|1881578|gb|AAC47473.1| (U66355) GS1-like protein
[Drosophila melanogaster]
Length = 231
Frame 1 hits (HSPs): __________________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | 231
0 50 100 150 200
__________________
Annotated Domains:
PFAM Hydrolase: haloacid dehalogenase-like hy 9..199
PRODOM PD010763: GS1(2) 16..138
PRODOM PD000816: GPH(3) CBBY(2) PNPP(2) 146..195
PRODOM PD077891: GS1_DROME 197..230
__________________
Plus Strand HSPs:
Score = 418 (147.1 bits), Expect = 3.8e-38, P = 3.8e-38
Identities = 93/189 (49%), Positives = 119/189 (62%), Frame = +1
Query: 100 VRRPITHVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVE 279
V R +TH VFDMDGLLLDTER YT E+IL Y KT+ + +K ++MG + AR VE
Sbjct: 5 VLRKVTHCVFDMDGLLLDTERLYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVE 64
Query: 280 ETGISDSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFE 459
+ +S E++ ++ E L ++ MPGA RL+ HLHA VP C+AT S E
Sbjct: 65 HYELP--MSWEEYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVE 122
Query: 460 LKTQRHHEIFSLMHHVVLGD-DPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPA 636
LKT +H E+FSL +H V G D EV GKP+PD FL AA RF G P PS+ LV +D+P
Sbjct: 123 LKTAQHRELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRF-GVPPKPSDCLVVQDSPN 181
Query: 637 GVLAAKNAGM 666
GV AA +AGM
Sbjct: 182 GVTAANSAGM 191
>gi|5019817|gb|AAD37862.1|AF143147_1 (AF143147) R151.8A protein [Caenorhabditis
elegans]
Length = 233
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 233
0 50 100 150 200
Plus Strand HSPs:
Score = 395 (139.0 bits), Expect = 1.0e-35, P = 1.0e-35
Identities = 83/186 (44%), Positives = 112/186 (60%), Frame = +1
Query: 112 ITHVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGI 291
+THV+FD DGLL+DTE YT+ +L +Y F LK + MGK+ ES R + E I
Sbjct: 5 VTHVIFDFDGLLVDTESAYTEANMELLRKYGHVFTMDLKRRQMGKRHDESIRWLINELKI 64
Query: 292 SDSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQ 471
D ++ E++ + +++L ++F S MPGA +LV HL GVPV + TGS R F K
Sbjct: 65 GDLVTPEEYSRQYDELLIEMFKRSPAMPGAEKLVRHLLHTGVPVALCTGSCSRTFPTKLD 124
Query: 472 RHHEIFSLMHHVVL-GDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLA 648
H + +++ VL GDDPEVK GKP PD FL KRF P +LVFED+ GVL+
Sbjct: 125 NHKDWVNMIKLQVLSGDDPEVKHGKPHPDPFLVTMKRFPQVPESADKVLVFEDSYNGVLS 184
Query: 649 AKNAGM 666
A +AGM
Sbjct: 185 ALDAGM 190
>gi|7506747|pir||T16768 hypothetical protein R151.8 - Caenorhabditis elegans
>gi|459004|gb|AAA50656.1| (U00036) R151.8 gene product
[Caenorhabditis elegans]
Length = 943
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | | 943
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 395 (139.0 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 83/186 (44%), Positives = 112/186 (60%), Frame = +1
Query: 112 ITHVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGI 291
+THV+FD DGLL+DTE YT+ +L +Y F LK + MGK+ ES R + E I
Sbjct: 5 VTHVIFDFDGLLVDTESAYTEANMELLRKYGHVFTMDLKRRQMGKRHDESIRWLINELKI 64
Query: 292 SDSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQ 471
D ++ E++ + +++L ++F S MPGA +LV HL GVPV + TGS R F K
Sbjct: 65 GDLVTPEEYSRQYDELLIEMFKRSPAMPGAEKLVRHLLHTGVPVALCTGSCSRTFPTKLD 124
Query: 472 RHHEIFSLMHHVVL-GDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLA 648
H + +++ VL GDDPEVK GKP PD FL KRF P +LVFED+ GVL+
Sbjct: 125 NHKDWVNMIKLQVLSGDDPEVKHGKPHPDPFLVTMKRFPQVPESADKVLVFEDSYNGVLS 184
Query: 649 AKNAGM 666
A +AGM
Sbjct: 185 ALDAGM 190
>gi|1575559|gb|AAC47471.1| (U66356) GS1-like protein [Drosophila melanogaster]
>gi|1881579|gb|AAC47474.1| (U66355) GS1-like protein [Drosophila
melanogaster]
Length = 216
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 381 (134.1 bits), Expect = 3.2e-34, P = 3.2e-34
Identities = 86/178 (48%), Positives = 111/178 (62%), Frame = +1
Query: 133 MDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDSLSAE 312
MDGLLLDTER YT E+IL Y KT+ + +K ++MG + AR VE + +S E
Sbjct: 1 MDGLLLDTERLYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVEHYELP--MSWE 58
Query: 313 QFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRHHEIFS 492
++ ++ E L ++ MPGA RL+ HLHA VP C+AT S ELKT +H E+FS
Sbjct: 59 EYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELKTAQHRELFS 118
Query: 493 LMHHVVLGD-DPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKNAGM 666
L +H V G D EV GKP+PD FL AA RF G P PS+ LV +D+P GV AA +AGM
Sbjct: 119 LFNHKVCGSSDKEVVNGKPAPDIFLVAAGRF-GVPPKPSDCLVVQDSPNGVTAANSAGM 176
>gi|7296084|gb|AAF51379.1| (AE003586) CG5565 gene product [Drosophila
melanogaster]
Length = 240
Frame 1 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | | | 240
0 50 100 150 200
Plus Strand HSPs:
Score = 339 (119.3 bits), Expect = 8.9e-30, P = 8.9e-30
Identities = 72/185 (38%), Positives = 108/185 (58%), Frame = +1
Query: 109 PITHVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETG 288
P+THV+FD DG L+D+E Y + + +LA+Y KT+ + + MG ++ V++
Sbjct: 9 PVTHVIFDCDGTLIDSEGIYLKTVQDLLAKYGKTYTKVDQTQHMGMPVGTFSQHIVKDLK 68
Query: 289 ISDSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKT 468
+ LS +F E E ++K + +PG L+ HLH +P C+AT S ++ F++K
Sbjct: 69 LP--LSPAEFQKEFEAAVDKSMGSVALLPGVRDLILHLHEYRIPFCIATSSFRKLFKVKA 126
Query: 469 QRHHEIFSLMHHVVLGDDPEVK--QGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGV 642
+ +IF HHVV GDDP + +GKP PD +L AA RF P DP L+FEDAP G+
Sbjct: 127 ESFKDIFLAFHHVVCGDDPALGPGRGKPYPDIYLLAASRFNP-PADPKKCLIFEDAPVGL 185
Query: 643 LAAKNAG 663
+ K AG
Sbjct: 186 IGGKAAG 192
>gi|7490619|pir||T40833 haloacid dehalogenase-like hydrolase - fission yeast
(Schizosaccharomyces pombe) >gi|3130050|emb|CAA18995.1| (AL023518)
haloacid dehalogenase-like hydrolase [Schizosaccharomyces pombe]
Length = 236
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 236
0 50 100 150 200
Plus Strand HSPs:
Score = 318 (111.9 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 78/190 (41%), Positives = 117/190 (61%), Frame = +1
Query: 124 VFDMDGLLLDTERFYTQVQEIILARYNK-TFDWSLKAKMMGKKAIESARIFVEETGISDS 300
+FDMDGLL+DTE YT+ IIL RYNK F +KAKMMG+ + E++RIF++ +GI
Sbjct: 7 LFDMDGLLVDTESIYTKSTNIILKRYNKGPFSMEVKAKMMGRTSKEASRIFLDWSGID-- 64
Query: 301 LSAEQFL-VEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRH 477
L+ E+++ ++RE E L+ ++P+PG L++ L + +P+ +AT S +FE K+
Sbjct: 65 LTCEEYIALQRETQAE-LWRHTKPLPGVMNLLSKLKSLNIPIALATSSDTHNFEKKSAHL 123
Query: 478 HEIFSLMH-HVVLGDDPE--VKQGKPSPD-GFLAAA----KRFEGGPVD--PSNILVFED 627
+F +++ GDDP V +GKP PD F+A KR G + P N LVFED
Sbjct: 124 SHLFDHFDGNIITGDDPRLPVGRGKPHPDIWFIALKMINDKRKAQGQAEILPENCLVFED 183
Query: 628 APAGVLAAKNAGM 666
+ GV + + AGM
Sbjct: 184 SITGVQSGRAAGM 196
>gi|7296085|gb|AAF51380.1| (AE003586) CG5564 gene product [Drosophila
melanogaster]
Length = 218
Frame 1 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | | | 218
0 50 100 150 200
Plus Strand HSPs:
Score = 300 (105.6 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 69/171 (40%), Positives = 98/171 (57%), Frame = +1
Query: 154 TERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDSLSAEQFLVERE 333
+ER T+ + IL Y T+ + LK + MGK E A + V + S++ +F ++E
Sbjct: 12 SERLRTETVQRILDPYGHTYSFDLKMRCMGKPDSEQAALIVNTFNLPFSMT--EFENQQE 69
Query: 334 DMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRHHEIFSLMHHVVL 513
MPG RL++HL A +P+ +A+G + F +KT+RH F + HHVVL
Sbjct: 70 LQCRGKMGFIRLMPGVERLLHHLKAFNIPMAIASGCCRDSFRIKTRRHSRPFDVFHHVVL 129
Query: 514 -GDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKNAGM 666
G D EVK+GKP+PD FL A RFE P +PS LVFE + G+ AA +AGM
Sbjct: 130 SGSDEEVKRGKPAPDVFLTTASRFEESP-EPSKCLVFESSLVGMEAALSAGM 180
>gi|3219967|sp|O14165|YDX1_SCHPO HYPOTHETICAL 27.1 KD PROTEIN C4C5.01 IN
CHROMOSOME I >gi|7491128|pir||T38787 hypothetical protein
SPAC4C5.01 - fission yeast (Schizosaccharomyces pombe)
>gi|2330799|emb|CAB11172.1| (Z98560) conserved hypothetical
haloacid dehalogenase-like hydrolase protein [Schizosaccharomyces
pombe]
Length = 246
Frame 1 hits (HSPs): _______________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | 246
0 50 100 150 200
__________________
Annotated Domains:
PFAM Hydrolase: haloacid dehalogenase-like hy 8..206
PRODOM PD010763: GS1(2) 15..136
PRODOM PD077897: YDX1_SCHPO 138..245
__________________
Plus Strand HSPs:
Score = 258 (90.8 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 68/187 (36%), Positives = 109/187 (58%), Frame = +1
Query: 124 VFDMDGLLLDTERFYTQVQEIILARYNKT-FDWSLKAKMMGKKAIESARIFVEETGISDS 300
+FDMDGLL+D+E YT+ +IL RY K S+KA+MMG+ +A++ ++ + I
Sbjct: 12 LFDMDGLLVDSETIYTKTTNLILDRYGKDPLPISVKAQMMGRPGSAAAKVVIDWSNIP-- 69
Query: 301 LSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRHH 480
++ +QF+ E++ + K + + +PMPGA L+N+L G+ + V T H + +KT
Sbjct: 70 MTPQQFVDEQQVIRAKFWSSLKPMPGAESLINNLSNHGIDIGVCT--HP-YAIIKTAHLK 126
Query: 481 EIFSLM-HHVVLGDDPEVK--QGKPSPDGFLAAAK-----RFEGG--PVDPSNILVFEDA 630
IF +V+ GD+P + +GKP PD +L R + G + PS + FED+
Sbjct: 127 HIFEKFGKNVITGDNPSIAPGRGKPFPDIWLKVLNLINESRKQRGLKALTPSQCIAFEDS 186
Query: 631 PAGVLAAKNAGM 666
GV +AK AGM
Sbjct: 187 IPGVKSAKAAGM 198
>gi|11863680|emb|CAC18787.1| (AL499607) putative hydrolase [Streptomyces
coelicolor]
Length = 233
Frame 1 hits (HSPs): ______________________________________
__________________________________________________
Database sequence: | | | | | | 233
0 50 100 150 200
Plus Strand HSPs:
Score = 222 (78.1 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 67/181 (37%), Positives = 93/181 (51%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDS 300
V+ DMDG L+DTE F+ V+ + A T D S + ++G SA +E TG +
Sbjct: 21 VLLDMDGTLVDTEGFWWDVELEVFASLGHTLDDSWRHVVVGGPMTRSAGFLIEATGADIT 80
Query: 301 LSAEQFLVEREDMLEKLFPTSEP-MPGASRLVNHLHAKGVPVCVATGSHKRHFE-LKTQR 474
L+ L+ D E+ P MPGA+RL+ L A +P + + SH+R + + T
Sbjct: 81 LAELSVLLN--DGFEQRIGRDLPLMPGAARLLAELSAHEIPTALVSASHRRIIDRVLTSL 138
Query: 475 HHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAK 654
F+L V GD EV + KP PD +LAAA G VDP+ V ED GV AA+
Sbjct: 139 GPRHFAL---TVAGD--EVPRTKPHPDPYLAAAA---GLGVDPARCAVVEDTATGVAAAE 190
Query: 655 NAG 663
AG
Sbjct: 191 AAG 193
>gi|7445120|pir||H72277 hypothetical protein TM1254 - Thermotoga maritima
(strain MSB8) >gi|4981809|gb|AAD36329.1|AE001780_13 (AE001780)
beta-phosphoglucomutase, putative [Thermotoga maritima]
Length = 216
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 218 (76.7 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 58/182 (31%), Positives = 94/182 (51%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDS 300
V+FDMDG+L+DTE Y + + Y K + L ++MG E I +E I DS
Sbjct: 4 VIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKDS 63
Query: 301 LSAEQFLVEREDMLEKLFPTS-EPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRH 477
L E F + +++F + PG + + +K + + +AT + +R L+ R
Sbjct: 64 L--ENFKKRVHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQRE-ALERLRR 120
Query: 478 HEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKN 657
++ +V GD +VK GKP P+ +L +R V P ++VFED+ +GV AAK+
Sbjct: 121 LDLEKYFDVMVFGD--QVKNGKPDPEIYLLVLERLN---VVPEKVVVFEDSKSGVEAAKS 175
Query: 658 AGM 666
AG+
Sbjct: 176 AGI 178
>gi|7296086|gb|AAF51381.1| (AE003586) CG5561 gene product [Drosophila
melanogaster]
Length = 305
Frame 1 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | | | || 305
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 191 (67.2 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 52/183 (28%), Positives = 83/183 (45%), Frame = +1
Query: 112 ITHVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGI 291
I++ +FD++ + DT Y + + ++ Y+K L + E + +F + I
Sbjct: 27 ISYCIFDLESAVFDTRHVYRKALKELVRCYDKRIPDILHVQSGPMTISEMSELFCRKLDI 86
Query: 292 SDSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQ 471
+S E F E + L M G RLV HL + + + T S++ ++ K +
Sbjct: 87 P--MSWESFRYELNERTSHLIANPPFMDGIERLVPHLRNSCMELGLITSSNEANYCSKIR 144
Query: 472 RHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAA 651
+ F VV DDPE++ KP PD +L A R G P LVF+ P GV AA
Sbjct: 145 GREDFFENFSTVVCADDPELRAPKPEPDVYLIAMSRL--GDAGPDCTLVFDGTPKGVQAA 202
Query: 652 KNA 660
+A
Sbjct: 203 SDA 205
>gi|1175252|sp|P44004|YQAB_HAEIN HYPOTHETICAL PROTEIN HI0488
>gi|1074418|pir||D64008 hypothetical protein HI0488 - Haemophilus
influenzae (strain Rd KW20) >gi|1573468|gb|AAC22147.1| (U32731)
conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 200
Frame 1 hits (HSPs): _____________________________________________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | 200
0 50 100 150
__________________
Annotated Domains:
DOMO DM00705: 7..188
PFAM Hydrolase: haloacid dehalogenase-like hy 10..194
PRODOM PD032759: YQAB(2) 6..146
PRODOM PD004064: PGMB(3) YQAB(2) YY00(2) 148..190
__________________
Plus Strand HSPs:
Score = 188 (66.2 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 52/186 (27%), Positives = 89/186 (47%), Frame = +1
Query: 109 PITHVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETG 288
P ++FDMDG L+DT + Q ++ ++ FD+ + G A ++
Sbjct: 9 PYEGLIFDMDGTLIDTMPVHAQAWTMVGKKFGYEFDFQIMYNFGGATVRTIAGEMMKAAN 68
Query: 289 IS-DSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELK 465
+ D + E L + ++ +L PT + +V H K P+ + +GSH++ ++
Sbjct: 69 MPLDRI--EDVLAAKRELSYQLIPTQSKLLPTFEIVKSFHQKK-PIALGSGSHRKIIDML 125
Query: 466 TQRHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVL 645
+ I + +V DD VK+ KP P+ FL A+ + +PS +VFEDA GV
Sbjct: 126 MDKL-AIAPYFNAIVSADD--VKEHKPHPETFLRCAELIQA---NPSRCIVFEDADLGVQ 179
Query: 646 AAKNAGM 666
A +AGM
Sbjct: 180 AGLSAGM 186
>gi|7296087|gb|AAF51382.1| (AE003586) CG5556 gene product [Drosophila
melanogaster]
Length = 279
Frame 1 hits (HSPs): ________________________________
__________________________________________________
Database sequence: | | | | | | | 279
0 50 100 150 200 250
Plus Strand HSPs:
Score = 186 (65.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 50/183 (27%), Positives = 81/183 (44%), Frame = +1
Query: 112 ITHVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGI 291
I++ +FD++ + DT Y + + A YNK ++ K + E A + + +
Sbjct: 7 ISYCIFDLESAVFDTRHVYKRAVIELAASYNKIIPEAVLIKSGPMETAEMAELICRKCDL 66
Query: 292 SDSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQ 471
+S E F + + L MPG RLV HL + + + T + + K +
Sbjct: 67 P--VSWESFRFQLNERTSDLIANPTLMPGVERLVTHLGRCCMGLGLITSCSESMYCTKIR 124
Query: 472 RHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAA 651
+ F V+ DD ++K KP PD +L A +R G P LVF+ P GV AA
Sbjct: 125 DREDFFQNFSSVICADDADLKAPKPEPDVYLIAMRRL--GDAGPDCTLVFDGTPKGVQAA 182
Query: 652 KNA 660
+A
Sbjct: 183 TDA 185
>gi|10803144|emb|CAC13072.1| (AL445503) putative hydrolase [Streptomyces
coelicolor]
Length = 238
Frame 1 hits (HSPs): ______________________________________
__________________________________________________
Database sequence: | | | | | | 238
0 50 100 150 200
Plus Strand HSPs:
Score = 184 (64.8 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 58/182 (31%), Positives = 86/182 (47%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYN-KTFDWSLKAKMMGKKAIESARIFVEETGISD 297
V+FD+DG L+D+E Y + LA Y F W+ +G E+ + G+
Sbjct: 12 VIFDLDGTLVDSEPHYYEAGRRTLAEYGVPDFSWADHEAYVGISTQETVADWKRRYGLRA 71
Query: 298 SLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRH 477
++ E V+ L ++ P + V L +GVP+ VA+GS R
Sbjct: 72 TVE-ELLAVKNRHYLGLARTSARAYPEMRKFVELLAGEGVPMAVASGSSPEAIAAILART 130
Query: 478 HEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKN 657
+ + + VV D EV +GKP+PD FL AA+R G +P+ +V EDA G AA
Sbjct: 131 G-LDAHLRTVVSAD--EVARGKPAPDVFLEAARRL-G--TEPARCVVLEDAAPGAAAAHA 184
Query: 658 AGM 666
AGM
Sbjct: 185 AGM 187
>gi|3024396|sp|O06995|PGMB_BACSU PUTATIVE BETA-PHOSPHOGLUCOMUTASE (BETA-PGM)
>gi|7429460|pir||E70034 beta-phosphoglucomutase homolog yvdM -
Bacillus subtilis >gi|1945672|emb|CAB08042.1| (Z94043) hypothetical
protein [Bacillus subtilis] >gi|2635968|emb|CAB15460.1| (Z99121)
similar to beta-phosphoglucomutase [Bacillus subtilis]
Length = 226
Frame 1 hits (HSPs): _________________________________________
Annotated Domains: ______________________________________________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
__________________
Annotated Domains:
PFAM Hydrolase: haloacid dehalogenase-like hy 1..191
PRODOM PD022574: PGMB(3) YY00(2) O58510(1) 1..140
PRODOM PD004064: PGMB(3) YQAB(2) YY00(2) 144..208
__________________
Plus Strand HSPs:
Score = 180 (63.4 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 56/182 (30%), Positives = 94/182 (51%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMG---KKAIESARIFV-EETG 288
V+FD+DG++ DT ++ + I + + FD + ++ G ++++ES IF ET
Sbjct: 4 VIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETK 63
Query: 289 ISDSLSAEQFLVERED---MLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFE 459
+++ E + D ++ KL P + +PG RL+ L + + + +A+ S
Sbjct: 64 YTNAEKQELMHRKNRDYQMLISKLTP-EDLLPGIGRLLCQLKNENIKIGLASSSRNAP-- 120
Query: 460 LKTQRHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAG 639
K R I H +V D + +GKP PD FL AA + V P++ EDA AG
Sbjct: 121 -KILRRLAIIDDFHAIV--DPTTLAKGKPDPDIFLTAAAMLD---VSPADCAAIEDAEAG 174
Query: 640 VLAAKNAGM 666
+ A K+AGM
Sbjct: 175 ISAIKSAGM 183
>gi|12517131|gb|AAG57799.1|AE005497_10 (AE005497) putative phosphatase
[Escherichia coli O157:H7]
Length = 188
Frame 1 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 188
0 50 100 150
Plus Strand HSPs:
Score = 177 (62.3 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 58/182 (31%), Positives = 84/182 (46%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDS 300
++FDMDG +LDTE + + +L Y +D + G A+ +E +D
Sbjct: 8 LIFDMDGTILDTEPTHRKAWREVLGHYGLQYDVQAMIALNGSPTWRIAQAIIE-LNQAD- 65
Query: 301 LSAEQFLVEREDMLEKLFPTS-EPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRH 477
L E+ + + + S EP+P +V H + P+ V TGS E H
Sbjct: 66 LDPHALAREKTEAVRSMLLDSVEPLP-LVEVVKSWHGRR-PMAVGTGSESAIAEALLA-H 122
Query: 478 HEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKN 657
+ VV D VK KP+PD FL A+R G V P+ +VFEDA G+ AA+
Sbjct: 123 LGLRRYFDAVVAAD--HVKHHKPAPDTFLLCAQRM--G-VQPTQCVVFEDADFGIQAARA 177
Query: 658 AGM 666
AGM
Sbjct: 178 AGM 180
>gi|3025284|sp|P77475|YQAB_ECOLI HYPOTHETICAL 20.8 KDA PROTEIN IN GSHA-CSRA
INTERGENIC REGION >gi|7429462|pir||C65049 hypothetical protein
b2690 - Escherichia coli (strain K-12) >gi|1789046|gb|AAC75737.1|
(AE000353) putative phosphatase [Escherichia coli K12]
>gi|1800081|dbj|BAA16557.1| (D90892) similar to [SwissProt
Accession Number P44004] [Escherichia coli]
Length = 188
Frame 1 hits (HSPs): _______________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 188
0 50 100 150
__________________
Annotated Domains:
PFAM Hydrolase: haloacid dehalogenase-like hy 5..188
PRODOM PD032759: YQAB(2) 1..140
PRODOM PD004064: PGMB(3) YQAB(2) YY00(2) 142..184
__________________
Plus Strand HSPs:
Score = 176 (62.0 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 58/182 (31%), Positives = 84/182 (46%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDS 300
++FDMDG +LDTE + + +L Y +D + G A+ +E +D
Sbjct: 8 LIFDMDGTILDTEPTHRKAWREVLGHYGLQYDIQAMIALNGSPTWRIAQAIIE-LNQAD- 65
Query: 301 LSAEQFLVEREDMLEKLFPTS-EPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRH 477
L E+ + + + S EP+P +V H + P+ V TGS E H
Sbjct: 66 LDPHALAREKTEAVRSMLLDSVEPLPLVD-VVKSWHGRR-PMAVGTGSESAIAEALLA-H 122
Query: 478 HEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKN 657
+ VV D VK KP+PD FL A+R G V P+ +VFEDA G+ AA+
Sbjct: 123 LGLRHYFDAVVAAD--HVKHHKPAPDTFLLCAQRM--G-VQPTQCVVFEDADFGIQAARA 177
Query: 658 AGM 666
AGM
Sbjct: 178 AGM 180
>gi|1724017|sp|P54607|YHCW_BACSU HYPOTHETICAL 24.7 KD PROTEIN IN CSPB-GLPP
INTERGENIC REGION >gi|7429463|pir||C69824 phosphoglycolate
phosphatase homolog yhcW - Bacillus subtilis
>gi|1239999|emb|CAA65707.1| (X96983) hypothetical protein [Bacillus
subtilis] >gi|2633247|emb|CAB12752.1| (Z99108) similar to
phosphoglycolate phosphatase [Bacillus subtilis]
Length = 220
Frame 1 hits (HSPs): _________________________________________
Annotated Domains: _______________________________________________
__________________________________________________
Database sequence: | | | | | | 220
0 50 100 150 200
__________________
Annotated Domains:
DOMO DM00705: 1..181
PFAM Hydrolase: haloacid dehalogenase-like hy 2..187
PRODOM PD085683: YHCW_BACSU 1..139
PRODOM PD000816: GPH(3) CBBY(2) PNPP(2) 141..206
__________________
Plus Strand HSPs:
Score = 170 (59.8 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 54/185 (29%), Positives = 88/185 (47%), Frame = +1
Query: 112 ITHVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGI 291
I ++FD DGL+LDTE +V + I + S+ K++G A ++EE I
Sbjct: 2 IKALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPLSVWGKVIGTAAGFRPFEYLEEQ-I 60
Query: 292 SDSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQ 471
L+ E+ R + K + + PG +N G+ + +A+ S + +
Sbjct: 61 GKKLNHEELTQLRRERFAKRMESEKARPGVEAYLNAAKDLGLKIGLASSSDYKWVSGHLK 120
Query: 472 RHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAA 651
+ +F + DD V++ KP+P+ +L AAK G V P+ L FED+ G +AA
Sbjct: 121 QIG-LFDDFEVIQTADD--VEEVKPNPELYLLAAKNL--G-VSPAECLAFEDSVNGSIAA 174
Query: 652 KNAGM 666
K AGM
Sbjct: 175 KRAGM 179
>gi|12516646|gb|AAG57422.1|AE005461_7 (AE005461) putative phosphatase
[Escherichia coli O157:H7]
Length = 216
Frame 1 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 168 (59.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 58/180 (32%), Positives = 88/180 (48%), Frame = +1
Query: 124 VFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDSL 303
+FD+DG L+D+ + R+ + L A + GK+AI S R F+ +D +
Sbjct: 7 LFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVL-AFIHGKQAITSLRHFMAGKSEAD-I 64
Query: 304 SAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRHHE 483
+AE +E+ + E T+ +PGA L+NHL+ G+P + T + H+
Sbjct: 65 AAEFTRLEQIEATETEGITA--LPGAIALLNHLNKAGIPWAIVTSGSMP----VARARHK 118
Query: 484 IFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKNAG 663
I L V VK+GKP PD +L A+ G + P +V EDAPAGVL+ AG
Sbjct: 119 IAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLL--G-LAPQECVVVEDAPAGVLSGLAAG 175
>gi|3025171|sp|P77625|YFBT_ECOLI 23.7 KDA PROTEIN IN LRHA-ACKA INTERGENIC
REGION >gi|7445116|pir||C65001 hypothetical protein b2293 -
Escherichia coli (strain K-12) >gi|1788630|gb|AAC75353.1|
(AE000318) putative phosphatase [Escherichia coli K12]
>gi|1799662|dbj|BAA16129.1| (D90860) 2-DEOXYGLUCOSE-6-PHOSPHATE
PHOSPHATASE 1 (EC 3.1.3.-) (2-DOG-6-P 1). [Escherichia coli]
>gi|1799667|dbj|BAA16133.1| (D90861) 2-DEOXYGLUCOSE-6-PHOSPHATE
PHOSPHATASE 1 (EC 3.1.3.-) (2-DOG-6-P 1). [Escherichia coli]
Length = 222
Frame 1 hits (HSPs): _______________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | 222
0 50 100 150 200
__________________
Annotated Domains:
PFAM Hydrolase: haloacid dehalogenase-like hy 9..190
PRODOM PD003468: GPH(5) 13..112
PRODOM PD202382: YFBT_ECOLI 114..141
PRODOM PD000816: GPH(3) CBBY(2) PNPP(2) 143..187
PRODOM PD163458: YFBT_ECOLI 189..221
__________________
Plus Strand HSPs:
Score = 162 (57.0 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 57/180 (31%), Positives = 87/180 (48%), Frame = +1
Query: 124 VFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDSL 303
+FD+DG L+D+ + R+ + L A + GK+AI S R F+ +D +
Sbjct: 13 LFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVL-AFIHGKQAITSLRHFMAGKSEAD-I 70
Query: 304 SAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRHHE 483
+AE +E + E T+ +PGA L++HL+ G+P + T + H+
Sbjct: 71 AAEFTRLEHIEATETEGITA--LPGAIALLSHLNKAGIPWAIVTSGSMP----VARARHK 124
Query: 484 IFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKNAG 663
I L V VK+GKP PD +L A+ G + P +V EDAPAGVL+ AG
Sbjct: 125 IAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLL--G-LAPQECVVVEDAPAGVLSGLAAG 181
>gi|7480757|pir||T36281 probable hydrolase - Streptomyces coelicolor
>gi|5123678|emb|CAB45367.1| (AL079345) putative hydrolase
[Streptomyces coelicolor A3(2)]
Length = 215
Frame 1 hits (HSPs): __________________________________________
__________________________________________________
Database sequence: | | | | | | 215
0 50 100 150 200
Plus Strand HSPs:
Score = 159 (56.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 62/182 (34%), Positives = 93/182 (51%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILAR--YNKTFDWSLKAKMMGKKAIESAR-IFVEETGI 291
V+FD DG+L+D+E ++ L + +++ SL+ M G A+ + +E TG
Sbjct: 6 VIFDNDGVLVDSEPISNRLLAGYLTELGHPTSYEDSLRDYMGG--AMHRVHDLVLERTG- 62
Query: 292 SDSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVAT-GSHKRHFELKT 468
L ++ V + EP+PGA ++ L A GV CVA+ GSH+R ++T
Sbjct: 63 -RRLPSDFDDVFHGRVFAAFERELEPVPGAVDVLEKLAADGVAYCVASSGSHER---IRT 118
Query: 469 -QRHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVL 645
R + + +V +GKP+PD FL AA R G V P +V ED+P GV
Sbjct: 119 GHRTAGLDRWFDDERIFSSQDVGRGKPAPDLFLHAAARM-G--VAPERCVVVEDSPLGVR 175
Query: 646 AAKNAGM 666
AA AGM
Sbjct: 176 AAVAAGM 182
>gi|12312059|emb|CAC22923.1| (AL512963) hypothetical [Sulfolobus solfataricus]
Length = 210
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 210
0 50 100 150 200
Plus Strand HSPs:
Score = 155 (54.6 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 52/182 (28%), Positives = 94/182 (51%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAK-MMGKKAIESARIFVEETGISD 297
V+FD+DG L +T+ + EI L + +D + + ++G+K I+ A+I + E+
Sbjct: 5 VIFDLDGTLANTDEVHKLAWEIALRKLG--YDVKVDIRYLLGRKTIDIAKILIGES---- 58
Query: 298 SLSAEQFLVEREDMLEKLFPT-SEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQR 474
AE+ + ++ +L T ++P P L+N L +P+ V T S R+ ++ +
Sbjct: 59 --HAEKLASVKTEIYNELVKTLAKPKPCVMELINRLRDVEIPIAVVTSS-MRNSAVQVLK 115
Query: 475 HHEIFSLMHHVVL-GDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAA 651
+ ++ V++ GDD VK GKP+P + A KR VDP+ + D V+A
Sbjct: 116 ---VINVEPDVLITGDD--VKLGKPNPMPVIEAIKRLN---VDPNESVGVGDTIYDVMAY 167
Query: 652 KNAGM 666
+AG+
Sbjct: 168 YSAGI 172
>gi|11362519|pir||H82710 phosphoglycolate phosphatase XF1201 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9106173|gb|AAF84011.1|AE003954_8 (AE003954) phosphoglycolate
phosphatase [Xylella fastidiosa]
Length = 226
Frame 1 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
Plus Strand HSPs:
Score = 158 (55.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 57/183 (31%), Positives = 82/183 (44%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDS 300
V+FDMDGL+LD+ER + + + + +M+G I G +
Sbjct: 14 VIFDMDGLMLDSERVSIECRCRAAFDLEQQIEPDYWLQMVGVSDIACHAQLSARIG---A 70
Query: 301 LSAEQFLVEREDMLEKLFPTSEP-MPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRH 477
+ A L + + E + P PG L+ L A+G+P V T S +R L+
Sbjct: 71 VPATALLARSDALYEAVVTKGVPHRPGIVTLLEWLFARGIPCAVGT-STRRPLALRKLNT 129
Query: 478 HEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKN 657
+ + V D V Q KP+PD +L AA G V P LV ED+P GV AA
Sbjct: 130 AGLLWRFNAVCTASD--VAQAKPAPDIYLLAAHTL--GIV-PGRCLVVEDSPIGVRAALA 184
Query: 658 AGMS 669
AGM+
Sbjct: 185 AGMT 188
>gi|11354451|pir||A82498 CbbY family protein VCA0102 [imported] - Vibrio
cholerae (group O1 strain N16961) >gi|9657489|gb|AAF96016.1|
(AE004353) CbbY family protein [Vibrio cholerae]
Length = 219
Frame 1 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | | | 219
0 50 100 150 200
Plus Strand HSPs:
Score = 156 (54.9 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 58/181 (32%), Positives = 85/181 (46%), Frame = +1
Query: 124 VFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDSL 303
+FDMDGLLLDTER +V + F + ++G A I + G D
Sbjct: 10 IFDMDGLLLDTERVCMRVFQEACTACGLPFRQEVYLSVIGCNAKTINGILSQAYG-EDLP 68
Query: 304 SAEQFLVERED--MLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRH 477
+R + ++ + P + G L+ L A+ +PV VAT + K +K Q
Sbjct: 69 RLHNEWRQRYNAVVMHEAIPHKD---GVIALLEWLKARSIPVAVATSTQKEVALIKLQ-- 123
Query: 478 HEIFSLMHHVV-LGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAK 654
+ L H+ + EV QGKP P+ +L AA+R G V+P L FED+ G+ AA
Sbjct: 124 --LAGLDHYFANITTGCEVTQGKPHPEIYLLAAERL-G--VEPQQCLAFEDSNNGIKAAM 178
Query: 655 NAGM 666
A M
Sbjct: 179 AAQM 182
>gi|12723659|gb|AAK04841.1|AE006308_1 (AE006308) conserved hypothetical protein
[Lactococcus lactis subsp. lactis]
Length = 222
Frame 1 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | | | 222
0 50 100 150 200
Plus Strand HSPs:
Score = 155 (54.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 58/181 (32%), Positives = 90/181 (49%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIES-ARIFVEETGISD 297
V+FDMDG+L+DTER+Y Q +E + + + +G + RI G D
Sbjct: 6 VIFDMDGVLVDTERYYLQRREEFFGGHGISISHLTPSDFIGGNMKDIWPRIL---QGSFD 62
Query: 298 SLSAEQFLVEREDMLEKLFPTSEPMPGASRL-------VNHLHAKGVPVCVATGSHKRHF 456
A + +ED + F + PMP A L + L K V + +A+ S F
Sbjct: 63 EEKASEL---QEDYEQ--FKENHPMPYAELLFSDVPDILEFLRQKEVKIALASSSSM--F 115
Query: 457 ELKTQRH-HEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAP 633
++K H++ S VV G+D KQ KP+P+ + + K+ G V PS L+ ED+
Sbjct: 116 DIKQMLDIHQLNSYFEVVVSGND--FKQTKPNPEIYQSTMKKL--G-VTPSETLIIEDSE 170
Query: 634 AGVLAAKNAG 663
G+ A + AG
Sbjct: 171 KGIQAGEAAG 180
>gi|7485723|pir||T05155 hypothetical protein F18E5.90 - Arabidopsis thaliana
>gi|3080391|emb|CAA18711.1| (AL022603) putative protein
[Arabidopsis thaliana] >gi|7268944|emb|CAB81254.1| (AL161555)
putative protein [Arabidopsis thaliana]
Length = 282
Frame 1 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | | | | 282
0 50 100 150 200 250
Plus Strand HSPs:
Score = 159 (56.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 37/130 (28%), Positives = 66/130 (50%), Frame = +1
Query: 97 SVRRPITHVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFV 276
S+++ + V+ D+DG L++T+ + L +Y K +D K++GK +E+A V
Sbjct: 6 SLKKLSSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGKTPVEAATTIV 65
Query: 277 EETGISDSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHF 456
E+ + ++F E + + +PGA+RL+ HL GVPV +A+ S + +
Sbjct: 66 EDYELP--CKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRANI 123
Query: 457 ELKTQRHHEI 486
E K H I
Sbjct: 124 ESKISYHEGI 133
>gi|11352931|pir||G81203 beta-phosphoglucomutase NMB0391 [imported] - Neisseria
meningitidis (group B strain MD58) >gi|7225613|gb|AAF40831.1|
(AE002395) beta-phosphoglucomutase [Neisseria meningitidis MC58]
Length = 221
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 154 (54.2 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 56/183 (30%), Positives = 87/183 (47%), Frame = +1
Query: 115 THVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETG-- 288
T V+FD+DG++ DT ++ + + + + D ++ G +S + + G
Sbjct: 4 TAVLFDLDGVITDTAEYHYRAWKKLAEELGISIDRKFNEQLKGVSRDDSLKRILAHGGKT 63
Query: 289 ISDSLSAEQFLVERE-----DMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRH 453
+S++ AE L R+ +M++ + P + PG L+ L A G + +A+ S
Sbjct: 64 VSEAEFAE--LTRRKNDNYVEMIQAVKP-EDVYPGILPLLEALRANGKKIALASASKNGP 120
Query: 454 FELKTQRHHEIFSLMHHV-VLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDA 630
F L E L H + D V KP+PD FLAAA EG D + EDA
Sbjct: 121 FLL------ERMGLTHFFDAIADPAAVAHSKPAPDIFLAAA---EGVDADIRQCIGIEDA 171
Query: 631 PAGVLAAKNAG 663
AGV A K AG
Sbjct: 172 AAGVAAIKAAG 182
>gi|7469169|pir||T03555 hypothetical protein - Rhodobacter capsulatus
>gi|3128356|gb|AAC16208.1| (AF010496) hypothetical protein
[Rhodobacter capsulatus]
Length = 225
Frame 1 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | | | 225
0 50 100 150 200
Plus Strand HSPs:
Score = 152 (53.5 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 58/183 (31%), Positives = 87/183 (47%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDS 300
++FD DG+L+D+E Q+ LA T D A ++ + V D
Sbjct: 5 IIFDCDGVLIDSEIISAQMLIAELALNGVTIDLDYVATHFLGRSYPTVLQQVRRDFALD- 63
Query: 301 LSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRHH 480
L + RE +L + MPG + L++ L +P CVAT S + + +R
Sbjct: 64 LPTDFETRYRERLLAAFERDMQVMPGVAALLDRLT---LPWCVATSSSRP----RAERSL 116
Query: 481 EIFSLMHHVV--LGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAK 654
EI L V L +V++GKP+PD FL AA++ G DP+ LV ED+ G+ A
Sbjct: 117 EIADLSQRVGSRLYTASQVERGKPAPDLFLLAARQM-GA--DPARCLVIEDSLNGIRAGL 173
Query: 655 NAGMS 669
AGM+
Sbjct: 174 AAGMT 178
>gi|11352929|pir||F81780 beta-phosphoglucomutase (EC 5.4.2.6) NMA2093
[imported] - Neisseria meningitidis (group A strain Z2491)
>gi|7380718|emb|CAB85309.1| (AL162758) beta-phosphoglucomutase
[Neisseria meningitidis Z2491]
Length = 221
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 150 (52.8 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 56/183 (30%), Positives = 86/183 (46%), Frame = +1
Query: 115 THVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETG-- 288
T V+FD+DG++ DT ++ + + + D ++ G +S + + G
Sbjct: 4 TAVLFDLDGVITDTAEYHYRAWKKLAEELGIGIDRKFNEQLKGVSRDDSLKRILAHGGKT 63
Query: 289 ISDSLSAEQFLVERE-----DMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRH 453
+S++ AE L R+ +M++ + P + PG L+ L A G + +A+ S
Sbjct: 64 VSEAEFAE--LTRRKNDNYVEMIQSVKP-EDVYPGILPLLEALRANGKKIALASASKNGP 120
Query: 454 FELKTQRHHEIFSLMHHV-VLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDA 630
F L E L H + D V KP+PD FLAAA EG D + EDA
Sbjct: 121 FLL------ERMGLTHFFDAVADPAAVAHSKPAPDIFLAAA---EGVGADIRRCIGIEDA 171
Query: 631 PAGVLAAKNAG 663
AGV A K AG
Sbjct: 172 AAGVAAIKAAG 182
>gi|10176489|dbj|BAB07583.1| (AP001520) beta-phosphoglucomutase [Bacillus
halodurans]
Length = 226
Frame 1 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
Plus Strand HSPs:
Score = 148 (52.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 48/178 (26%), Positives = 82/178 (46%), Frame = +1
Query: 109 PITHVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETG 288
P V+FDMDG++ DT + + + I + + TF + + G ++ R + TG
Sbjct: 4 PFEAVIFDMDGVIADTVGLHYEANQHIAKKLSVTFSEEMNQSLQGLSREKTVRAICDLTG 63
Query: 289 --ISDSLSAEQFLVEREDMLEKLFPTSEP---MPGASRLVNHLHAKGVPVCVATGSHKRH 453
+SD +Q R + ++L P +PG + L K V + +A+ S
Sbjct: 64 EEVSDE-QVKQLSELRNEQYQRLIAELTPADALPGIYSFIRELKEKKVSIALASASTNAP 122
Query: 454 FELKTQRHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAP 633
L + + F V+ D +V++GKP P+ FL AA+ G V + + ED
Sbjct: 123 RVLSRLQLIDAFD-----VIVDVQKVRRGKPDPEIFLTAAQLL-G--VSSNRCVAIEDGE 174
Query: 634 AGV 642
AG+
Sbjct: 175 AGL 177
>gi|11352930|pir||B81781 beta-phosphoglucomutase (EC 5.4.2.6) NMA2097
[imported] - Neisseria meningitidis (group A strain Z2491)
>gi|7380722|emb|CAB85313.1| (AL162758) beta-phosphoglucomutase
[Neisseria meningitidis Z2491]
Length = 221
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 147 (51.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 50/183 (27%), Positives = 82/183 (44%), Frame = +1
Query: 115 THVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETG-- 288
T V+FD+DG++ DT ++ + + + D ++ G +S + + G
Sbjct: 4 TAVLFDLDGVITDTAEYHYRAWKKLAEELGIGIDRKFNEQLKGVSRDDSLKRILAHGGKT 63
Query: 289 ISDSLSAEQFLVEREDMLEKL--FPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFEL 462
+ ++ AE + ++ +E + + PG L+ L A G + +A+ S F L
Sbjct: 64 VGEAEFAELTRYKNDNYVEMIQAVKPEDVYPGILPLLEALKANGKKIALASASKNGPFLL 123
Query: 463 KTQRHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGV 642
+ + F + D V KP+PD FLAAA EG D + EDA AGV
Sbjct: 124 ERMGLTDFFD-----AIADPAAVAHSKPAPDIFLAAA---EGVGADIRRCIGIEDAAAGV 175
Query: 643 LAAKNAG 663
A K AG
Sbjct: 176 AAIKAAG 182
>gi|12515452|gb|AAG56485.1|AE005375_3 (AE005375) putative
beta-phosphoglucomutase [Escherichia coli O157:H7]
Length = 219
Frame 1 hits (HSPs): __________________________________________
__________________________________________________
Database sequence: | | | | | | 219
0 50 100 150 200
Plus Strand HSPs:
Score = 146 (51.4 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 51/182 (28%), Positives = 82/182 (45%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDS 300
V+FD+DG++ DT + Q + I A + D + G ES R ++ G
Sbjct: 6 VIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGD 65
Query: 301 LSAEQF--LVEREDMLE----KLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFEL 462
+ ++ L R+++L + + +PG L+ L A+ +PV +A+ S L
Sbjct: 66 FNPQERTQLAYRKNLLYVHSLRELTVNAVLPGIRNLLAELRAQQIPVGLASVSLNAPTIL 125
Query: 463 KTQRHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGV 642
E F+ D ++K KP P+ FLAA G V P + EDA AG+
Sbjct: 126 AALELREFFTFC-----ADASQLKNSKPDPEIFLAACA---GLGVPPQACIGIEDAQAGI 177
Query: 643 LAAKNAGM 666
A +GM
Sbjct: 178 DAINASGM 185
>gi|3024400|sp|P71447|PGMB_LACLA BETA-PHOSPHOGLUCOMUTASE (BETA-PGM)
>gi|1495997|emb|CAA94734.1| (Z70730) beta-phosphoglucomutase
[Lactococcus lactis]
Length = 221
Frame 1 hits (HSPs): _________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
__________________
Annotated Domains:
PFAM Hydrolase: haloacid dehalogenase-like hy 2..191
PRODOM PD022574: PGMB(3) YY00(2) O58510(1) 3..141
PRODOM PD004064: PGMB(3) YQAB(2) YY00(2) 145..188
PRODOM PD080521: PGMB_LACLA 190..220
__________________
Plus Strand HSPs:
Score = 142 (50.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 50/181 (27%), Positives = 93/181 (51%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYN-KTFDWSLKAKMMGKKAIESARIFVEETGISD 297
V+FD+DG++ DT ++ + + + D ++ G +S + ++ ++D
Sbjct: 5 VLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILD---LAD 61
Query: 298 S-LSAEQF--LVERED-----MLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRH 453
+SAE+F L +R++ M++ + P ++ PG +L+ L + + + +A+ S
Sbjct: 62 KKVSAEEFKELAKRKNDNYVKMIQDVSP-ADVYPGILQLLKDLRSNKIKIALASASKNGP 120
Query: 454 FELKTQRHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAP 633
F L+ F + D EV KP+PD F+AAA G V PS + ED+
Sbjct: 121 FLLERMNLTGYFD-----AIADPAEVAASKPAPDIFIAAAHAV-G--VAPSESIGLEDSQ 172
Query: 634 AGVLAAKNAG 663
AG+ A K++G
Sbjct: 173 AGIQAIKDSG 182
>gi|12723306|gb|AAK04527.1|AE006280_3 (AE006280) beta-phosphoglucomutase (EC
5.4.2.6) [Lactococcus lactis subsp. lactis]
Length = 221
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 142 (50.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 50/181 (27%), Positives = 93/181 (51%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYN-KTFDWSLKAKMMGKKAIESARIFVEETGISD 297
V+FD+DG++ DT ++ + + + D ++ G +S + ++ ++D
Sbjct: 5 VLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILD---LAD 61
Query: 298 S-LSAEQF--LVERED-----MLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRH 453
+SAE+F L +R++ M++ + P ++ PG +L+ L + + + +A+ S
Sbjct: 62 KKVSAEEFKELAKRKNDNYVKMIQDVSP-ADVYPGILQLLKDLRSNKIKIALASASKNGP 120
Query: 454 FELKTQRHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAP 633
F L+ F + D EV KP+PD F+AAA G V PS + ED+
Sbjct: 121 FLLEKMNLTGYFD-----AIADPAEVAASKPAPDIFIAAAHAV-G--VAPSESIGLEDSQ 172
Query: 634 AGVLAAKNAG 663
AG+ A K++G
Sbjct: 173 AGIQAIKDSG 182
>gi|11351389|pir||H83387 probable hydrolase PA2067 [imported] - Pseudomonas
aeruginosa (strain PAO1) >gi|9948076|gb|AAG05455.1|AE004633_6
(AE004633) probable hydrolase [Pseudomonas aeruginosa]
Length = 222
Frame 1 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | | 222
0 50 100 150 200
Plus Strand HSPs:
Score = 139 (48.9 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 43/121 (35%), Positives = 62/121 (51%), Frame = +1
Query: 301 LSAEQFLVEREDMLEKLFPTSEPM-PGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRH 477
+ + L +R D LE+ P+ PG + ++ L VP+ + T S + R
Sbjct: 54 MERRRILKQRVDALEE--GADCPLLPGVAAVIRQLRWLDVPLALVTSSWPARID-HVLRQ 110
Query: 478 HEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKN 657
H++ + +V DD V GKP+PDG+ AA R G V PS LVFED+ +GV AA
Sbjct: 111 HDLQAAFRTLVSRDD--VVHGKPAPDGYRLAAARL--G-VAPSRCLVFEDSLSGVQAACA 165
Query: 658 AG 663
AG
Sbjct: 166 AG 167
>gi|3024403|sp|P77366|PGMB_ECOLI PUTATIVE BETA-PHOSPHOGLUCOMUTASE (BETA-PGM)
>gi|7429461|pir||H64880 probable beta-phosphoglucomutase (EC
5.4.2.6) ycjU - Escherichia coli >gi|1742154|dbj|BAA14892.1|
(D90769) Phosphoglycolate phosphatase (EC 3.1.3.18). [Escherichia
coli] >gi|1742162|dbj|BAA14899.1| (D90770) Phosphoglycolate
phosphatase (EC 3.1.3.18). [Escherichia coli]
>gi|1787576|gb|AAC74399.1| (AE000229) putative
beta-phosphoglucomutase [Escherichia coli K12]
Length = 219
Frame 1 hits (HSPs): __________________________________________
Annotated Domains: ______________________________________________
__________________________________________________
Database sequence: | | | | | | 219
0 50 100 150 200
__________________
Annotated Domains:
PFAM Hydrolase: haloacid dehalogenase-like hy 3..193
PRODOM PD022574: PGMB(3) YY00(2) O58510(1) 3..142
PRODOM PD004064: PGMB(3) YQAB(2) YY00(2) 147..199
__________________
Plus Strand HSPs:
Score = 138 (48.6 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 50/182 (27%), Positives = 82/182 (45%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDS 300
V+FD+DG++ DT + Q + I A + D + G ES R ++ G
Sbjct: 6 VIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGD 65
Query: 301 LSAEQF--LVEREDMLE----KLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFEL 462
++++ L R+++L + + +PG L+ L A+ + V +A+ S L
Sbjct: 66 FNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTIL 125
Query: 463 KTQRHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGV 642
E F+ D ++K KP P+ FLAA G V P + EDA AG+
Sbjct: 126 AALELREFFTFC-----ADASQLKNSKPDPEIFLAACA---GLGVPPQACIGIEDAQAGI 177
Query: 643 LAAKNAGM 666
A +GM
Sbjct: 178 DAINASGM 185
>gi|11354452|pir||D82431 CbbY family protein VCA0662 [imported] - Vibrio
cholerae (group O1 strain N16961) >gi|9658079|gb|AAF96563.1|
(AE004396) CbbY family protein [Vibrio cholerae]
Length = 212
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 212
0 50 100 150 200
Plus Strand HSPs:
Score = 137 (48.2 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 52/181 (28%), Positives = 81/181 (44%), Frame = +1
Query: 124 VFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMM-GKKAIESARIFVE-ETGISD 297
+FDMDG LLDT + E K FD+ A+ + G + SA+I +
Sbjct: 24 IFDMDGTLLDTMPAHLAAWEATA----KHFDFPFDAQWLYGLGGMPSAKITTHINKKLGL 79
Query: 298 SLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRH 477
+L ++ + D + +E +P L+ K + + TGS +R L+ +
Sbjct: 80 ALDPDRVAAYKMDWFASMGLQAEVIPATYELLCQWQGKK-KMAIGTGS-QRDSALRLLSN 137
Query: 478 HEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKN 657
++ VV D V+Q KP P+ FL A ++ G + P LVFED G+ AA
Sbjct: 138 AQVLDKFDAVVTASD--VQQHKPHPETFLMACEQL--G-LTPKQCLVFEDTQLGLQAAHA 192
Query: 658 AGM 666
GM
Sbjct: 193 GGM 195
>gi|7472031|pir||C75253 hydrolase, CbbY/CbbZ/GpH/YieH family - Deinococcus
radiodurans (strain R1) >gi|6460441|gb|AAF12150.1|AE002090_6
(AE002090) hydrolase, CbbY/CbbZ/GpH/YieH family [Deinococcus
radiodurans]
Length = 238
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 238
0 50 100 150 200
Plus Strand HSPs:
Score = 139 (48.9 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 57/201 (28%), Positives = 90/201 (44%), Frame = +1
Query: 64 HRAMAHPSAVVSVRRPITHVVFDMDGLLLDTE-RFYTQVQEIIL--ARYNKTFDWSLKAK 234
+ A P+A + + VVFD DG +LDTE R + QE+ R DW
Sbjct: 13 YTAAMTPAATIP--EGLRAVVFDFDGTILDTETREFHHWQELYREHGRELALSDW----- 65
Query: 235 MMGKKAIESARIFVEETGISDSLSAEQFLVERE--DMLEKLFPTSEPMPGASRLVNHLHA 408
++ + + F G+ + + A++ V D + + PG ++ + A
Sbjct: 66 ---QRGVGTWDAFDPWAGLPEQVQADRENVRARLHDTIVSDIAGQDLRPGVRAVLEGVKA 122
Query: 409 KGVPVCVATGSHKRHFELKTQRHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEG 588
G+ + +AT S R + + R H + L V DD V++ KP P+ +L AA R
Sbjct: 123 AGLRLALATSSD-REWVTRWMRQHNLLDLFEAVATRDD--VRRVKPDPELYLLAAARL-- 177
Query: 589 GPVDPSNILVFEDAPAGVLAAKNAGM 666
G + P L ED+ G AA AGM
Sbjct: 178 G-LRPEECLAVEDSFNGATAAVAAGM 202
>gi|3913203|sp|O33513|CBBY_RHOCA CBBY PROTEIN >gi|7435099|pir||T10510 cbbY
protein - Rhodobacter capsulatus >gi|2564976|gb|AAB82052.1|
(U23145) CbbY [Rhodobacter capsulatus]
Length = 227
Frame 1 hits (HSPs): _________________________________________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 227
0 50 100 150 200
__________________
Annotated Domains:
PFAM Hydrolase: haloacid dehalogenase-like hy 3..198
PRODOM PD015859: CBBY(2) 3..150
PRODOM PD000816: GPH(3) CBBY(2) PNPP(2) 152..215
__________________
Plus Strand HSPs:
Score = 138 (48.6 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 50/185 (27%), Positives = 92/185 (49%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYNKTFDWS------LKAKMMGKKAIESARIFVEE 282
++FD+DG L +TE + Q A + WS L GK+ + R +
Sbjct: 6 LIFDVDGTLAETEEVHRQAFNETFAAQGLDWYWSKEDYRTLLRTTGGKERMAKHRENLG- 64
Query: 283 TGISDSLSAEQFLVEREDMLEKLFPTSEP--MPGASRLVNHLHAKGVPVCVATGSHKRHF 456
+G SD+ A+ + + +E + + + +PG + L++ A G+ + +AT + + +
Sbjct: 65 SGPSDAKIADLHKAKTQRYVE-IIASGQVGLLPGVAELIDRAKASGLRLAIATTTTRANV 123
Query: 457 E-LKTQRHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAP 633
+ L + + V+ D EV Q KP+PD +L A +G + P+ L FED+
Sbjct: 124 DALIAATFSKPAGDIFEVIAAGD-EVAQKKPAPDVYLRA---LQGLGLPPAACLAFEDSR 179
Query: 634 AGVLAAKNAGM 666
AG+ +A+ AG+
Sbjct: 180 AGLASARAAGL 190
>gi|12721392|gb|AAK03141.1| (AE006146) unknown [Pasteurella multocida]
Length = 199
Frame 1 hits (HSPs): ____________________________________________
__________________________________________________
Database sequence: | | | | | 199
0 50 100 150
Plus Strand HSPs:
Score = 132 (46.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/182 (28%), Positives = 81/182 (44%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDS 300
++FDMDG ++DT + + + + S+ ++ G A+ + + +
Sbjct: 13 LIFDMDGTVVDTMPCHERAWLKVADKVGYPLSPSVMYELAGAPLRTIAQEMMLRANMPLT 72
Query: 301 LSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRHH 480
E ++R+ + + +P A+ +V H + P+ + TGSH R K
Sbjct: 73 QLQEVMKLKRQFGHALIMAEATLLP-AAEIVKSYHNQK-PMALGTGSH-REITHKLLNKL 129
Query: 481 EIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAKNA 660
EI VV +D V + KP PD FL A+ G V+P LVFEDA GV A A
Sbjct: 130 EIAHCFDAVVTSED--VAKHKPEPDTFLRCAELI--G-VNPQTCLVFEDADLGVQAGLAA 184
Query: 661 GM 666
GM
Sbjct: 185 GM 186
>gi|1890581|emb|CAB01954.1| (Z79692) ORF24 [Sinorhizobium meliloti]
Length = 233
Frame 1 hits (HSPs): ____________________________________
__________________________________________________
Database sequence: | | | | | | 233
0 50 100 150 200
Plus Strand HSPs:
Score = 134 (47.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 58/181 (32%), Positives = 86/181 (47%), Frame = +1
Query: 121 VVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGIS-D 297
++FDMDG LL++ +V R N +L + G +A+++ R G+ D
Sbjct: 25 LLFDMDGTLLNSMAVVERVWGSWALR-NGIDPVALMKIVHGVRAVDTIRAL----GLPVD 79
Query: 298 SLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQRH 477
+ L E E + + E +PGA + L + + + EL +R
Sbjct: 80 PEQEARILAEAE--IADVEGIVE-IPGAVSFLKTLPPERWAIVTSAP-----LELAARRL 131
Query: 478 HEI-FSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAAK 654
+ H+V G+D V GKP P G+L AA+R G V + LVFEDAPAGVLA K
Sbjct: 132 EAAGIPVPRHMVTGEDVSV--GKPDPQGYLLAAQRL-G--VRAEDCLVFEDAPAGVLAGK 186
Query: 655 NAG 663
+AG
Sbjct: 187 SAG 189
>gi|3724126|emb|CAA11906.1| (AJ224340) beta-phosphoglucomutase [Lactobacillus
sanfranciscensis]
Length = 223
Frame 1 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | | | 223
0 50 100 150 200
Plus Strand HSPs:
Score = 131 (46.1 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 44/179 (24%), Positives = 83/179 (46%), Frame = +1
Query: 127 FDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGISDSLS 306
FD+DG++ DT +F+TQ + + N T+ L+ + G + S + ++ D +
Sbjct: 12 FDLDGVITDTAKFHTQAWHALADQVNVTWTPELQESLKGIDRMGSLEMILKAGNKQDDYT 71
Query: 307 AEQFLVERE-------DMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELK 465
++ + +++ L P + +PG + + L+ KG VA+ S F L
Sbjct: 72 HDEKVALASWKNNHYVELISGLTP-DDILPGMADFIKELNDKGYRASVASASKNAPFILD 130
Query: 466 TQRHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVL 645
+ F V + D + GKP P+ F+ AA+ + P ++ ED+ AG+
Sbjct: 131 KLGLTDSF-----VGIVDPATLHAGKPDPEIFVRAAEILN---LLPEQVIGLEDSAAGIA 182
Query: 646 AAKNAG 663
+ AG
Sbjct: 183 SINGAG 188
>gi|549553|sp|P35924|YFGS_LACCA HYPOTHETICAL 22.8 KD PROTEIN IN FGS 3'REGION
>gi|98654|pir||B35534 hypothetical 23K protein - Lactobacillus
casei >gi|1196483|gb|AAA88211.1| (J05221) unknown protein
[Lactobacillus casei]
Length = 215
Frame 1 hits (HSPs): _________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 215
0 50 100 150 200
__________________
Annotated Domains:
DOMO DM00705: 1..179
PFAM Hydrolase: haloacid dehalogenase-like hy 2..185
PRODOM PD015859: CBBY(2) 1..140
PRODOM PD080518: YFGS_LACCA 142..214
__________________
Plus Strand HSPs:
Score = 125 (44.0 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 45/182 (24%), Positives = 87/182 (47%), Frame = +1
Query: 121 VVFDMDGLLLDTERFY--TQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETGIS 294
V+FD+DG L++TE Y + V+ + ++T + + ++G A+I + G
Sbjct: 5 VIFDLDGTLVNTEALYLKSNVKAAAVLGLHRT-EADFRP-LVGSAGPSEAKIIADLVGAD 62
Query: 295 DSLSAEQFLVEREDMLEKLFPTSE-PMPGASRLVNHLHAKGVPVCVATGSHKRHFELKTQ 471
+ +QF +D+L+++ ++ +PGA + + L G + +AT S K + ++
Sbjct: 63 HAAWFQQF--STQDVLDQIRSGADFVLPGADKTLQTLDQMGYRLALATSSAKHYVDVVLA 120
Query: 472 RHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAGVLAA 651
+ ++ G D V KP P+ + + P P+ +V ED GV AA
Sbjct: 121 ATGWV-KRFDPILTGSD--VTAHKPDPEIYHVMKTKL---PETPA--IVVEDTHVGVAAA 172
Query: 652 KNAGM 666
+ AG+
Sbjct: 173 EGAGL 177
>gi|7471180|pir||H75374 beta-phosphoglucomutase-related protein - Deinococcus
radiodurans (strain R1) >gi|6459388|gb|AAF11182.1|AE002005_11
(AE002005) beta-phosphoglucomutase-related protein [Deinococcus
radiodurans]
Length = 237
Frame 1 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | | | 237
0 50 100 150 200
Plus Strand HSPs:
Score = 125 (44.0 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 49/185 (26%), Positives = 79/185 (42%), Frame = +1
Query: 109 PITHVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIFVEETG 288
P V+FD+DG+L+++E QV + +LA D + A + + ++ +
Sbjct: 5 PFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQ- 63
Query: 289 ISDSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATGSHKRHFELKT 468
D + FL E + GA+ + L A GVP + + S + LK
Sbjct: 64 -HDFVPPPDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKL 122
Query: 469 QRHHEIFSLM-HHVVLGDDPEVK--QGKPSPDGFLAAAKRFEGGPVDPSNILVFEDAPAG 639
R + L H+ DP +GKP PD + AA++ G + P +V ED+ G
Sbjct: 123 -RVAGLTELAGEHIY---DPSWVGGRGKPHPDLYTFAAQQL--G-ILPERCVVIEDSVTG 175
Query: 640 VLAAKNAG 663
A AG
Sbjct: 176 GAAGLAAG 183
>gi|4884847|gb|AAD31837.1| (AF131879) AnsH phosphatase [Streptomyces collinus]
Length = 268
Frame 1 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
Plus Strand HSPs:
Score = 126 (44.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 58/187 (31%), Positives = 94/187 (50%), Frame = +1
Query: 109 PITHVVFDMDGLLLDT-----ERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESARIF 273
PI+ VVFD+DG+L+++ + F T E++ + F+ + +G+ + RI
Sbjct: 55 PISAVVFDLDGVLVNSFAVMRQAFTTAYAEVV-GDGDAPFEEY--ERHLGRYFPDIMRIM 111
Query: 274 VEETGISDSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVATG-SHKR 450
G+ + A V L L P + +P ++ L A+GV + VATG S R
Sbjct: 112 ----GLPPEMEAP--FVRESYRLAHLVPVFDGVP---EMLGQLRARGVGLAVATGKSGPR 162
Query: 451 HFELKTQRHHEIFSLMH--HVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFE 624
L Q L+H VV+G D EV++ KP+PD L A G DPS ++
Sbjct: 163 ARSLLEQ-----LGLLHLFTVVIGSD-EVRRPKPAPDIVLKALGVL-GS--DPSRTVMVG 213
Query: 625 DAPAGVLAAKNAGMS 669
DA + +A++AG++
Sbjct: 214 DAVTDLASARDAGVA 228
WARNING: HSPs involving 49 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.98
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.369 0.161 0.664
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.348 0.153 0.514
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.326 0.139 0.423
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.336 0.143 0.479
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.342 0.146 0.474
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.360 0.162 0.580
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 222 222 10. 77 3 12 22 0.11 35
32 0.12 38
+2 0 222 222 10. 77 3 12 22 0.11 35
32 0.12 38
+1 0 223 223 10. 77 3 12 22 0.11 35
32 0.12 38
-1 0 223 223 10. 77 3 12 22 0.11 35
32 0.12 38
-2 0 222 222 10. 77 3 12 22 0.11 35
32 0.12 38
-3 0 222 222 10. 77 3 12 22 0.11 35
32 0.12 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 99
No. of states in DFA: 596 (59 KB)
Total size of DFA: 233 KB (256 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 237.82u 1.10s 238.92t Elapsed: 00:00:45
Total cpu time: 237.90u 1.16s 239.06t Elapsed: 00:00:45
Start: Thu Jan 17 00:56:40 2002 End: Thu Jan 17 00:57:25 2002
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000