R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|6686408|gb|AAF23842.1|AC007234_14 (AC007234) F1E22.7 [Arabidopsis thaliana]
Length = 260
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | | 260
0 50 100 150 200 250
Plus Strand HSPs:
Score = 349 (122.9 bits), Expect = 7.8e-31, P = 7.8e-31
Identities = 62/99 (62%), Positives = 84/99 (84%), Frame = +2
Query: 2 AGSLPKFYQGHRNTTVLSIPLTGKTQDATGLQSTLQNQLQESGNVPLNLKVKQPVRIKLG 181
+GSLPKFYQGH NTTV+ + +TG+TQ+A+GL++TL+ Q Q +GN+PL ++V QPVR+K G
Sbjct: 162 SGSLPKFYQGHENTTVIYVEMTGQTQNASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFG 221
Query: 182 KLKLFKIKFRVRCKIVVDSLSANSSIRIQSSSCKFRFRL 298
KLKLF+++F VRC + VDSL+ N+ I+IQSSSCKFR RL
Sbjct: 222 KLKLFEVRFLVRCGVFVDSLATNNVIKIQSSSCKFRLRL 260
>gi|10178216|dbj|BAB11640.1| (AB016877) gb|AAF23842.1~gene_id:MLF18.15~similar
to unknown protein [Arabidopsis thaliana]
Length = 256
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | | 256
0 50 100 150 200 250
Plus Strand HSPs:
Score = 337 (118.6 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 62/98 (63%), Positives = 82/98 (83%), Frame = +2
Query: 5 GSLPKFYQGHRNTTVLSIPLTGKTQDATGLQSTLQNQLQESGNVPLNLKVKQPVRIKLGK 184
GSLPKFYQGH NTT++ + +TG TQ+AT L +TLQ Q + +G++PL ++V QPVRIKLGK
Sbjct: 159 GSLPKFYQGHENTTIILVEMTGFTQNATSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGK 218
Query: 185 LKLFKIKFRVRCKIVVDSLSANSSIRIQSSSCKFRFRL 298
LKL K++F VRC + VDSL+ANS IR++SS+CK+RFRL
Sbjct: 219 LKLMKVRFLVRCGVSVDSLAANSVIRVRSSNCKYRFRL 256
>gi|4585996|gb|AAD25632.1|AC005287_34 (AC005287) Hypothetical protein
[Arabidopsis thaliana]
Length = 239
Frame 2 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | | 239
0 50 100 150 200
Plus Strand HSPs:
Score = 260 (91.5 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 51/98 (52%), Positives = 70/98 (71%), Frame = +2
Query: 5 GSLPKFYQGHRNTTVLSIPLTGKTQDATGLQSTLQNQLQESGNVPLNLKVKQPVRIKLGK 184
G +P+FYQGHRN T L++ LTG+ Q + + LQ Q Q++G VPL+LKV PV IKLG
Sbjct: 143 GPIPRFYQGHRNVTKLNVALTGRAQYGNTVLAALQQQ-QQTGRVPLDLKVNAPVAIKLGN 201
Query: 185 LKLFKIKFRVRCKIVVDSLSANSSIRIQSSSCKFRFRL 298
LK+ KI+ CK+VVDSLS N++I I++S C F+ +L
Sbjct: 202 LKMKKIRILGSCKLVVDSLSTNNNINIKASDCSFKAKL 239
>gi|3885338|gb|AAC77866.1| (AC005623) unknown protein [Arabidopsis thaliana]
Length = 260
Frame 2 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | | | 260
0 50 100 150 200 250
Plus Strand HSPs:
Score = 162 (57.0 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 36/92 (39%), Positives = 56/92 (60%), Frame = +2
Query: 5 GSLPKFYQGHRNTTVLSIPLTG-KTQDATGLQSTLQNQLQESGNVPLNLKVKQPVRIKLG 181
G +P FYQ +N TV+ + L+G K Q +G++ ++N++ + VP LK+K PV+IK G
Sbjct: 164 GVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKK-TVPFKLKIKAPVKIKFG 222
Query: 182 KLKLFKIKFRVRCKIVVDSLSANSSIRIQSSSC 280
+K + + V C + VD L+A S RI S C
Sbjct: 223 SVKTWTMIVNVDCDVTVDKLTAPS--RIVSRKC 253
>gi|6041818|gb|AAF02133.1|AC009918_5 (AC009918) unknown protein [Arabidopsis
thaliana]
Length = 240
Frame 2 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | 240
0 50 100 150 200
Plus Strand HSPs:
Score = 122 (42.9 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 29/99 (29%), Positives = 55/99 (55%), Frame = +2
Query: 2 AGSLPKFYQGHRNTTVLSIPLTGKTQDATG--LQSTLQNQLQESGNVPLNLKVKQPVRIK 175
+ ++ FYQGH+NTTV+ + G+ G ++ L++ ++SG +N K++ VR K
Sbjct: 139 SANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDD-EKSGIYRINAKLRLSVRFK 197
Query: 176 LGKLKLFKIKFRVRC---KIVVDSLSANSSIRIQSSSCKF 286
+K +K+K +++C KI + S ++ + Q C F
Sbjct: 198 FWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQPVQCDF 237
>gi|9502176|gb|AAF88023.1|AF264699_1 (AF264699) NDR1/HIN1-like protein 3
[Arabidopsis thaliana]
Length = 230
Frame 2 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | 230
0 50 100 150 200
Plus Strand HSPs:
Score = 117 (41.2 bits), Expect = 0.00018, P = 0.00018
Identities = 30/99 (30%), Positives = 50/99 (50%), Frame = +2
Query: 2 AGSLPKFYQGHRNTTVLSIPLTGKTQDATGLQSTLQNQLQESGNVPL---NLKVKQPVRI 172
+ ++ KFYQGH+NTTV+ L G Q L + L E N + + K++ +R
Sbjct: 132 SNNISKFYQGHKNTTVVGTKLVG--QQLVLLDGGERKDLNEDVNSQIYRIDAKLRLKIRF 189
Query: 173 KLGKLKLFKIKFRVRCKIVVDSLS-ANSSIRIQSSSCKFRF 292
K G +K ++ K +++C + V S + S Q + C F
Sbjct: 190 KFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQPTKCDVDF 230
>gi|9758412|dbj|BAB08954.1| (AB006700) harpin-induced protein-like [Arabidopsis
thaliana]
Length = 231
Frame 2 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | 231
0 50 100 150 200
Plus Strand HSPs:
Score = 117 (41.2 bits), Expect = 0.00019, P = 0.00019
Identities = 30/99 (30%), Positives = 50/99 (50%), Frame = +2
Query: 2 AGSLPKFYQGHRNTTVLSIPLTGKTQDATGLQSTLQNQLQESGNVPL---NLKVKQPVRI 172
+ ++ KFYQGH+NTTV+ L G Q L + L E N + + K++ +R
Sbjct: 133 SNNISKFYQGHKNTTVVGTKLVG--QQLVLLDGGERKDLNEDVNSQIYRIDAKLRLKIRF 190
Query: 173 KLGKLKLFKIKFRVRCKIVVDSLS-ANSSIRIQSSSCKFRF 292
K G +K ++ K +++C + V S + S Q + C F
Sbjct: 191 KFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQPTKCDVDF 231
>gi|9502174|gb|AAF88022.1|AF264698_1 (AF264698) NDR1/HIN1-Like protein 2
[Arabidopsis thaliana]
Length = 240
Frame 2 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | 240
0 50 100 150 200
Plus Strand HSPs:
Score = 117 (41.2 bits), Expect = 0.00021, P = 0.00021
Identities = 28/99 (28%), Positives = 55/99 (55%), Frame = +2
Query: 2 AGSLPKFYQGHRNTTVLSIPLTGKTQDATG--LQSTLQNQLQESGNVPLNLKVKQPVRIK 175
+ ++ FYQGH+NTTV+ + G+ G ++ L++ ++SG ++ K++ VR K
Sbjct: 139 SANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDD-EKSGIYRIDAKLRLSVRFK 197
Query: 176 LGKLKLFKIKFRVRC---KIVVDSLSANSSIRIQSSSCKF 286
+K +K+K +++C KI + S ++ + Q C F
Sbjct: 198 FWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQPVQCDF 237
>gi|4510371|gb|AAD21459.1| (AC007017) hin1-like protein [Arabidopsis thaliana]
Length = 227
Frame 2 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | | 227
0 50 100 150 200
Plus Strand HSPs:
Score = 113 (39.8 bits), Expect = 0.00059, P = 0.00059
Identities = 35/100 (35%), Positives = 49/100 (49%), Frame = +2
Query: 8 SLPKFYQGHRNTTVLSIPLTGKTQDATGL-QSTLQNQLQESGNVPLNLKVKQPVRIKLGK 184
+L FYQGH+NTTVL+ G+ QS N + SG + +K + VR KLG
Sbjct: 128 TLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGD 187
Query: 185 LKLFKIKFRVRCKIVVDSLSANSSIRIQSS----SCKFRF 292
LK +IK +V C + LS ++ S+ C F F
Sbjct: 188 LKFRRIKPKVDCDDLRLPLSTSNGTTTTSTVFPIKCDFDF 227
Score = 110 (38.7 bits), Expect = 0.0015, P = 0.0014
Identities = 29/72 (40%), Positives = 39/72 (54%), Frame = +2
Query: 8 SLPKFYQGHRNTTVLSIPLTGKTQDATGL-QSTLQNQLQESGNVPLNLKVKQPVRIKLGK 184
+L FYQGH+NTTVL+ G+ QS N + SG + +K + VR KLG
Sbjct: 128 TLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGD 187
Query: 185 LKLFKIKFRVRC 220
LK +IK +V C
Sbjct: 188 LKFRRIKPKVDC 199
>gi|7489141|pir||T03265 hin1 protein - common tobacco
>gi|1619321|emb|CAA68848.1| (Y07563) hin1 [Nicotiana tabacum]
Length = 221
Frame 2 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 0.0018, P = 0.0018
Identities = 27/94 (28%), Positives = 49/94 (52%), Frame = +2
Query: 8 SLPKFYQGHRNTTVLSIPLTGKTQDATG-LQSTLQNQLQESGNVPLNLKVKQPVRIKLGK 184
+L FYQGH+NT+ L G++ G + + N + G + +K+ +R+K+G
Sbjct: 124 NLEPFYQGHKNTSSLRPVFKGQSLVLLGDREKSNYNNEKNLGVYEMEVKLYMRIRLKVGW 183
Query: 185 LKLFKIKFRVRC--KIVVDSLSANSSIRIQSSSC 280
+K KIK ++ C K+ + S +SS + + C
Sbjct: 184 IKTHKIKPKIECDFKVPLGSNGRSSSANFEETRC 217
>gi|7417006|gb|AAF62403.1|AF212183_1 (AF212183) harpin inducing protein
[Nicotiana tabacum]
Length = 229
Frame 2 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | | 229
0 50 100 150 200
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 0.0020, P = 0.0020
Identities = 27/94 (28%), Positives = 49/94 (52%), Frame = +2
Query: 8 SLPKFYQGHRNTTVLSIPLTGKTQDATG-LQSTLQNQLQESGNVPLNLKVKQPVRIKLGK 184
+L FYQGH+NT+ L G++ G + + N + G + +K+ +R+K+G
Sbjct: 132 NLEPFYQGHKNTSSLRPVFKGQSLVLLGDREKSNYNNEKNLGVYEMEVKLYMRIRLKVGW 191
Query: 185 LKLFKIKFRVRC--KIVVDSLSANSSIRIQSSSC 280
+K KIK ++ C K+ + S +SS + + C
Sbjct: 192 IKTHKIKPKIECDFKVPLGSNGRSSSANFEETRC 225
>gi|3608142|gb|AAC36175.1| (AC005314) hin1-like protein [Arabidopsis thaliana]
Length = 238
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | 238
0 50 100 150 200
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 0.0023, P = 0.0023
Identities = 25/90 (27%), Positives = 48/90 (53%), Frame = +2
Query: 2 AGSLPKFYQGHRNTTVLSIPLTGKTQDATGLQSTLQ-NQLQESGNVPLNLKVKQPVRIKL 178
A ++ FYQGH+NTTV+ L G+ G + + SG +++K++ +R K
Sbjct: 139 AANMTSFYQGHKNTTVVGTELNGQKLVLLGAGGRRDFREDRRSGVYRIDVKLRFKLRFKF 198
Query: 179 GKLKLFKIKFRVRCKIVVDSLSANSSIRIQ 268
G L + ++ +++C + V +++S R Q
Sbjct: 199 GFLNSWAVRPKIKCHLKVPLSTSSSDERFQ 228
>gi|4510372|gb|AAD21460.1| (AC007017) putative harpin-induced protein
[Arabidopsis thaliana]
Length = 211
Frame 2 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | | 211
0 50 100 150 200
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 0.50, P = 0.39
Identities = 24/95 (25%), Positives = 39/95 (41%), Frame = +2
Query: 2 AGSLPKFYQGHRNTTVLSIPLTGKTQDATGLQSTLQNQLQESGNVPLNLKVKQPVRIKLG 181
A LP YQ H+ +V S L G + Q SG L + V VR K+G
Sbjct: 107 ASDLPPTYQRHKENSVWSPLLYGNQVPIAPFNAVALGDEQNSGVFTLTICVDGRVRWKVG 166
Query: 182 KLKLFKIKFRVRCKIVVDSLSANSSIRIQSSSCKF 286
L + VRC+ ++ + + + ++ K+
Sbjct: 167 TLTIGNYHLHVRCQAFINQADKAAGVHVGENTVKY 201
>gi|7267654|emb|CAB78082.1| (AL161515) putative protein [Arabidopsis thaliana]
>gi|7321078|emb|CAB82126.1| (AL161831) putative protein
[Arabidopsis thaliana]
Length = 211
Frame 2 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | | 211
0 50 100 150 200
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 0.50, P = 0.39
Identities = 24/95 (25%), Positives = 39/95 (41%), Frame = +2
Query: 2 AGSLPKFYQGHRNTTVLSIPLTGKTQDATGLQSTLQNQLQESGNVPLNLKVKQPVRIKLG 181
A LP YQ H+ +V S L G + Q SG L + V VR K+G
Sbjct: 107 ASDLPPTYQRHKEDSVWSPLLYGNQVPIAPFNAVALGDEQNSGVFTLTICVDGQVRWKVG 166
Query: 182 KLKLFKIKFRVRCKIVVDSLSANSSIRIQSSSCKF 286
L + VRC+ ++ + + + ++ K+
Sbjct: 167 TLTIGNYHLHVRCQAFINQADKAAGVHVGENTVKY 201
>gi|6226321|sp|Q9ZE49|Y098_RICPR HYPOTHETICAL PROTEIN RP098
>gi|7467655|pir||A71719 hypothetical protein RP098 - Rickettsia
prowazekii >gi|3860667|emb|CAA14568.1| (AJ235270) unknown
[Rickettsia prowazekii]
Length = 83
Frame 3 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | | 83
0 20 40 60 80
Plus Strand HSPs:
Score = 67 (23.6 bits), Expect = 1.7, P = 0.82
Identities = 12/34 (35%), Positives = 24/34 (70%), Frame = +3
Query: 234 IALVLIVLS--EFRVVVVNS--GLGCDFFSYHYI 323
+ +V+++ S +FR++V+ + GL C +F+Y YI
Sbjct: 39 LGIVILIFSPAKFRIIVIGTILGLACAYFTYKYI 72
>gi|9631432 ref|NP_048305.1| ORF MSV233 hypothetical protein [Melanoplus
sanguinipes entomopoxvirus] >gi|11362403|pir||T28395 ORF MSV233
hypothetical protein - Melanoplus sanguinipes entomopoxvirus
>gi|4049785|gb|AAC97745.1| (AF063866) ORF MSV233 hypothetical
protein [Melanoplus sanguinipes entomopoxvirus]
Length = 92
Frame 2 hits (HSPs): ____________________________________________
__________________________________________________
Database sequence: | | | | | | 92
0 20 40 60 80
Plus Strand HSPs:
Score = 67 (23.6 bits), Expect = 1.7, P = 0.82
Identities = 19/80 (23%), Positives = 37/80 (46%), Frame = +2
Query: 284 FRFRL*FFFLSLYSIFIIGGYANCFVTI*FVSFLLWFLIEISL*MDFSLDFHHHFEILFL 463
F F F F+ +++ I + F+ I + F+ F+ I + F+ F H F + +
Sbjct: 3 FHFIFIFTFIFIHTFIFIIIFMFTFIFIIIIIFMFTFIFIIIIIFMFTFIFIHTFIFITI 62
Query: 464 YF*FWFFSQFSYILLHIAYI 523
F F F ++I + I ++
Sbjct: 63 IFMFTFIFIHTFIFIIIIFM 82
>gi|8778464|gb|AAF79472.1|AC022492_16 (AC022492) F1L3.32 [Arabidopsis thaliana]
Length = 264
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | | 264
0 50 100 150 200 250
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 1.8, P = 0.84
Identities = 25/104 (24%), Positives = 48/104 (46%), Frame = +2
Query: 5 GSLPKFYQGHRNTTVLSIPLTGKTQDATGLQS-TLQNQLQESGNVPLNLKVKQPVRIKLG 181
G++ F G +NTT L + + + + L+ L+ V + + + V++K+G
Sbjct: 156 GTIAAFSHGKKNTTTLRSTIGSPPDELDEISAGKLKGDLKAKKAVAIKIVLNSKVKVKMG 215
Query: 182 KLKLFKIKFRVRC---KIVVDSLSANSSIRIQSSSCKF--RFRL 298
LK K RV C K+V + ++ ++ CK RF++
Sbjct: 216 ALKTPKSGIRVTCEGIKVVAPTGKKATTATTSAAKCKVDPRFKI 259
>gi|11762174|gb|AAG40365.1|AF325013_1 (AF325013) F1L3.32 [Arabidopsis thaliana]
Length = 265
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | | 265
0 50 100 150 200 250
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 1.8, P = 0.84
Identities = 25/104 (24%), Positives = 48/104 (46%), Frame = +2
Query: 5 GSLPKFYQGHRNTTVLSIPLTGKTQDATGLQS-TLQNQLQESGNVPLNLKVKQPVRIKLG 181
G++ F G +NTT L + + + + L+ L+ V + + + V++K+G
Sbjct: 157 GTIAAFSHGKKNTTTLRSTIGSPPDELDEISAGKLKGDLKAKKAVAIKIVLNSKVKVKMG 216
Query: 182 KLKLFKIKFRVRC---KIVVDSLSANSSIRIQSSSCKF--RFRL 298
LK K RV C K+V + ++ ++ CK RF++
Sbjct: 217 ALKTPKSGIRVTCEGIKVVAPTGKKATTATTSAAKCKVDPRFKI 260
>gi|4510373|gb|AAD21461.1| (AC007017) putative harpin-induced protein
[Arabidopsis thaliana]
Length = 210
Frame 2 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | | 210
0 50 100 150 200
Plus Strand HSPs:
Score = 84 (29.6 bits), Expect = 2.0, P = 0.87
Identities = 22/93 (23%), Positives = 40/93 (43%), Frame = +2
Query: 8 SLPKFYQGHRNTTVLSIPLTGKTQDATGLQSTLQNQLQESGNVPLNLKVKQPVRIKLGKL 187
++P YQGH+ V S + G + + Q G V L ++ VR K+G L
Sbjct: 108 AIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIRADGRVRWKVGTL 167
Query: 188 KLFKIKFRVRCKIVVDSLSANSSIRIQSSSCKF 286
K VRC+ ++ + + + ++ K+
Sbjct: 168 ITGKYHLHVRCQAFINLADKAAGVHVGENAVKY 200
>gi|897642|gb|AAB59222.1| (M14820) ORF2 bases 1807-2850; first start codon at
2032; putative [Trypanosoma brucei]
Length = 272
Frame 2 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | | | 272
0 50 100 150 200 250
Plus Strand HSPs:
Score = 84 (29.6 bits), Expect = 3.3, P = 0.96
Identities = 36/108 (33%), Positives = 54/108 (50%), Frame = +2
Query: 200 IKFRVRCKIVV--DSLSANSSIRIQSSSCKFRFRL*FFFLSLYSIFI---IGGYANCFVT 364
I F +RC +V D L N I + C + L LY FI I G+ + FV
Sbjct: 87 IFFVIRCLFIVIMDFLFFNFDIFVSILLCDIVYLDFISLLLLYFNFIFNFIYGFFS-FVI 145
Query: 365 I*FVSFLLWFLIEISL*MDFSLDFHHHFEILFLYF*FWFFSQFS---YILL 508
I + FLL FL+ I+L F+ + +I+ LY+ +W + +S YIL+
Sbjct: 146 ILGLLFLLLFLV-INLFFGFTF-LVYGIQIILLYYVYWLYMIYSRSCYILM 194
>gi|84045|pir||A05235 hypothetical protein A-288 - Trypanosoma brucei
mitochondrion
Length = 288
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | | 288
0 50 100 150 200 250
Plus Strand HSPs:
Score = 84 (29.6 bits), Expect = 3.6, P = 0.97
Identities = 36/108 (33%), Positives = 54/108 (50%), Frame = +2
Query: 200 IKFRVRCKIVV--DSLSANSSIRIQSSSCKFRFRL*FFFLSLYSIFI---IGGYANCFVT 364
I F +RC +V D L N I + C + L LY FI I G+ + FV
Sbjct: 103 IFFVIRCLFIVIMDFLFFNFDIFVSILLCDIVYLDFISLLLLYFNFIFNFIYGFFS-FVI 161
Query: 365 I*FVSFLLWFLIEISL*MDFSLDFHHHFEILFLYF*FWFFSQFS---YILL 508
I + FLL FL+ I+L F+ + +I+ LY+ +W + +S YIL+
Sbjct: 162 ILGLLFLLLFLV-INLFFGFTF-LVYGIQIILLYYVYWLYMIYSRSCYILM 210
>gi|11282595|pir||T49138 hypothetical protein T10D17.10 - Arabidopsis thaliana
>gi|7649373|emb|CAB88990.1| (AL353865) putative protein
[Arabidopsis thaliana]
Length = 206
Frame 2 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | | 206
0 50 100 150 200
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 4.4, P = 0.99
Identities = 24/70 (34%), Positives = 33/70 (47%), Frame = +2
Query: 11 LPKFYQGHRNTTVLSIPLTGKTQDATGLQSTLQNQLQESGNVPLNLKVKQPVRIKLGKLK 190
LP YQGH + T+ S L G T S +Q +G V LN+K+ VR K+G
Sbjct: 108 LPATYQGHLDVTIWSPFLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWV 167
Query: 191 LFKIKFRVRC 220
+ + V C
Sbjct: 168 SGRYRLHVNC 177
>gi|84041|pir||F22845 hypothetical protein 6 - Trypanosoma brucei mitochondrion
Length = 347
Frame 2 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | 347
0 150 300
Plus Strand HSPs:
Score = 84 (29.6 bits), Expect = 4.9, P = 0.99
Identities = 36/108 (33%), Positives = 54/108 (50%), Frame = +2
Query: 200 IKFRVRCKIVV--DSLSANSSIRIQSSSCKFRFRL*FFFLSLYSIFI---IGGYANCFVT 364
I F +RC +V D L N I + C + L LY FI I G+ + FV
Sbjct: 162 IFFVIRCLFIVIMDFLFFNFDIFVSILLCDIVYLDFISLLLLYFNFIFNFIYGFFS-FVI 220
Query: 365 I*FVSFLLWFLIEISL*MDFSLDFHHHFEILFLYF*FWFFSQFS---YILL 508
I + FLL FL+ I+L F+ + +I+ LY+ +W + +S YIL+
Sbjct: 221 ILGLLFLLLFLV-INLFFGFTF-LVYGIQIILLYYVYWLYMIYSRSCYILM 269
>gi|7489482|pir||T02662 hin1 protein homolog - rice >gi|2801538|gb|AAB97367.1|
(AF039532) harpin induced gene 1 homolog [Oryza sativa]
Length = 205
Frame 2 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | | 205
0 50 100 150 200
Plus Strand HSPs:
Score = 78 (27.5 bits), Expect = 9.9, P = 1.0
Identities = 27/94 (28%), Positives = 46/94 (48%), Frame = +2
Query: 11 LPKFYQGHRNTTVLSIPLTGKTQDATG--LQSTLQNQLQESGNVPLNLKVKQPVRIKLGK 184
L FYQ +T LS G+ Q G + ++Q Q +G + +K+ +R+K+
Sbjct: 113 LDSFYQSTEASTKLSPAFKGQ-QPLQGDITAANFRSQ-QTAGKFDIEVKLNAKLRVKVWA 170
Query: 185 LKLFKIKFRVRCKIVVDSLSANSSIRIQSSSCKFRF 292
K+ K ++ C I V + SA ++ Q + CK F
Sbjct: 171 FKVPGPKPKISCPITVPA-SAPNAPAFQRTDCKVWF 205
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.99
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.355 0.157 0.558
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.354 0.160 0.533
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.370 0.170 0.667
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.346 0.153 0.486
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.353 0.156 0.546
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.381 0.171 0.660
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 187 187 10. 76 3 12 22 0.12 34
31 0.12 37
+2 0 188 188 10. 76 3 12 22 0.12 34
31 0.12 37
+1 0 188 188 10. 76 3 12 22 0.12 34
31 0.12 37
-1 0 188 188 10. 76 3 12 22 0.12 34
31 0.12 37
-2 0 188 188 10. 76 3 12 22 0.12 34
31 0.12 37
-3 0 187 187 10. 76 3 12 22 0.12 34
31 0.12 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 24
No. of states in DFA: 593 (58 KB)
Total size of DFA: 202 KB (256 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 173.98u 0.91s 174.89t Elapsed: 00:00:52
Total cpu time: 174.01u 0.94s 174.95t Elapsed: 00:00:52
Start: Thu Jan 17 03:38:13 2002 End: Thu Jan 17 03:39:05 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000