BLASTP 2.2.4 [Aug-26-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= SAG1201
(367 letters)
Database: nr
1,487,057 sequences; 479,114,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22537359|ref|NP_688210.1| iminodiacetate oxidase, putative [S... 736 0.0
gi|25011323|ref|NP_735718.1| Unknown [Streptococcus agalactiae N... 734 0.0
gi|28849792|gb|AAN64549.1| putative oxidoreductase [Streptococcu... 452 e-126
gi|15903504|ref|NP_359054.1| Conserved hypothetical protein [Str... 446 e-124
gi|15901448|ref|NP_346052.1| oxidoreductase, DadA family protein... 443 e-123
gi|24379859|ref|NP_721814.1| putative oxidoreductase [Streptococ... 428 e-119
gi|19745994|ref|NP_607130.1| putative oxidoreductase [Streptococ... 427 e-118
gi|21910181|ref|NP_664449.1| putative oxidoreductase [Streptococ... 423 e-117
gi|15674952|ref|NP_269126.1| putative oxidoreductase [Streptococ... 422 e-117
gi|28378450|ref|NP_785342.1| oxidoreductase [Lactobacillus plant... 270 3e-71
gi|16080316|ref|NP_391143.1| similar to opine catabolism [Bacill... 250 3e-65
gi|21400611|ref|NP_656596.1| DAO, FAD dependent oxidoreductase [... 244 1e-63
gi|16803949|ref|NP_465434.1| similar to oxidoreductases [Listeri... 244 2e-63
gi|29375049|ref|NP_814202.1| oxidoreductase, DadA family [Entero... 244 2e-63
gi|30020845|ref|NP_832476.1| D-amino acid dehydrogenase small su... 238 1e-61
gi|22990746|ref|ZP_00035551.1| hypothetical protein [Enterococcu... 233 4e-60
gi|16801090|ref|NP_471358.1| similar to oxidoreductases [Listeri... 233 5e-60
gi|25401962|pir||A86859 hypothetical protein yteB [imported] - L... 219 5e-56
gi|30024057|ref|NP_268030.2| hypothetical protein [Lactococcus l... 219 8e-56
gi|23098470|ref|NP_691936.1| iminodiacetate oxidase [Oceanobacil... 207 3e-52
gi|9957197|gb|AAG09254.1|AF176664_3 iminodiacetate oxidase [EDTA... 184 2e-45
gi|23104231|ref|ZP_00090699.1| hypothetical protein [Azotobacter... 100 5e-20
gi|23470037|ref|ZP_00125371.1| hypothetical protein [Pseudomonas... 97 6e-19
gi|28868045|ref|NP_790664.1| oxidoreductase, FAD-binding [Pseudo... 89 1e-16
gi|32423746|gb|AAP81270.1| putative D-amino acid oxidase [Pseudo... 84 4e-15
gi|30248661|ref|NP_840731.1| NAD binding site:D-amino acid oxida... 84 4e-15
gi|26987349|ref|NP_742774.1| oxidoreductase, FAD-binding [Pseudo... 81 2e-14
gi|30018906|ref|NP_830537.1| Glycine oxidase [Bacillus cereus AT... 77 3e-13
gi|21398693|ref|NP_654678.1| DAO, FAD dependent oxidoreductase [... 77 7e-13
gi|17228849|ref|NP_485397.1| hypothetical protein [Nostoc sp. PC... 74 4e-12
gi|15597391|ref|NP_250885.1| hydrogen cyanide synthase HcnC [Pse... 71 4e-11
gi|3220203|gb|AAC38596.1| hydrogen cyanide synthase HcnC [Pseudo... 71 4e-11
gi|32042295|ref|ZP_00139878.1| hypothetical protein [Pseudomonas... 70 6e-11
gi|32042293|ref|ZP_00139876.1| hypothetical protein [Pseudomonas... 70 6e-11
gi|23130265|ref|ZP_00112082.1| hypothetical protein [Nostoc punc... 69 1e-10
gi|15599744|ref|NP_253238.1| probable D-amino acid oxidase [Pseu... 69 2e-10
gi|32042297|ref|ZP_00139880.1| hypothetical protein [Pseudomonas... 69 2e-10
gi|1161219|gb|AAB39269.1| homolgous to D-amino acid dehydrogenas... 68 2e-10
gi|23061428|ref|ZP_00086273.1| hypothetical protein [Pseudomonas... 67 4e-10
gi|22299596|ref|NP_682843.1| ORF_ID:tll2053~hypothetical protein... 64 5e-09
gi|22299911|ref|NP_683158.1| ORF_ID:tlr2368~probable D-amino aci... 63 1e-08
gi|15966027|ref|NP_386380.1| PUTATIVE OXIDOREDUCTASE PROTEIN [Si... 62 2e-08
gi|23041848|ref|ZP_00073275.1| hypothetical protein [Trichodesmi... 61 2e-08
gi|32475636|ref|NP_868630.1| probable D-amino acid oxidase [Pire... 60 6e-08
gi|15596464|ref|NP_249958.1| hypothetical protein [Pseudomonas a... 60 6e-08
gi|15595101|ref|NP_212890.1| B. burgdorferi predicted coding reg... 60 7e-08
gi|16329276|ref|NP_440004.1| unknown protein [Synechocystis sp. ... 59 1e-07
gi|32039836|ref|ZP_00138108.1| hypothetical protein [Pseudomonas... 59 2e-07
gi|27382301|ref|NP_773830.1| soxB [Bradyrhizobium japonicum] >gn... 58 3e-07
gi|27468976|ref|NP_765613.1| glycine oxidase [Staphylococcus epi... 58 3e-07
gi|22969884|ref|ZP_00017087.1| hypothetical protein [Chloroflexu... 57 4e-07
gi|25012559|gb|AAN71380.1| RE37361p [Drosophila melanogaster] 57 6e-07
gi|23058001|ref|ZP_00083112.1| hypothetical protein [Pseudomonas... 56 8e-07
gi|22999833|ref|ZP_00043793.1| hypothetical protein [Magnetococc... 55 2e-06
gi|20130091|ref|NP_611263.1| CG6385-PA [Drosophila melanogaster]... 55 3e-06
gi|26991143|ref|NP_746568.1| nopaline dehydrogenase, putative [P... 54 3e-06
gi|15614604|ref|NP_242907.1| BH2041~unknown conserved protein [B... 54 4e-06
gi|32473614|ref|NP_866608.1| D-amino acid dehydrogenase, small c... 54 4e-06
gi|15606107|ref|NP_213484.1| hypothetical protein [Aquifex aeoli... 53 6e-06
gi|23060393|ref|ZP_00085300.1| hypothetical protein [Pseudomonas... 50 5e-05
gi|19554205|ref|NP_602207.1| D-amino acid dehydrogenase subunit ... 50 7e-05
>gi|22537359|ref|NP_688210.1| iminodiacetate oxidase, putative
[Streptococcus agalactiae 2603V/R]
gi|22534231|gb|AAN00083.1|AE014246_18 iminodiacetate oxidase,
putative [Streptococcus agalactiae 2603V/R]
Length = 367
Score = 736 bits (1901), Expect = 0.0
Identities = 367/367 (100%), Positives = 367/367 (100%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR 60
MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR
Sbjct: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR 60
Query: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD 120
MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD
Sbjct: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD 120
Query: 121 LQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDN 180
LQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDN
Sbjct: 121 LQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDN 180
Query: 181 GFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVMPEG 240
GFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVMPEG
Sbjct: 181 GFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVMPEG 240
Query: 241 ELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIR 300
ELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIR
Sbjct: 241 ELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIR 300
Query: 301 AYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITK 360
AYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITK
Sbjct: 301 AYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITK 360
Query: 361 YVKKISR 367
YVKKISR
Sbjct: 361 YVKKISR 367
>gi|25011323|ref|NP_735718.1| Unknown [Streptococcus agalactiae
NEM316]
gi|24412861|emb|CAD46933.1| Unknown [Streptococcus agalactiae
NEM316]
Length = 367
Score = 734 bits (1896), Expect = 0.0
Identities = 365/367 (99%), Positives = 367/367 (99%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR 60
MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR
Sbjct: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR 60
Query: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD 120
MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRL+SPLIGD
Sbjct: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLKSPLIGD 120
Query: 121 LQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDN 180
LQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDN
Sbjct: 121 LQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDN 180
Query: 181 GFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVMPEG 240
GFRVQGIDFDKLVLASGAWLAKILDEHNYQVD+RPQKGQLRDYYFSNINTGKYPVVMPEG
Sbjct: 181 GFRVQGIDFDKLVLASGAWLAKILDEHNYQVDIRPQKGQLRDYYFSNINTGKYPVVMPEG 240
Query: 241 ELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIR 300
ELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIR
Sbjct: 241 ELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIR 300
Query: 301 AYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITK 360
AYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITK
Sbjct: 301 AYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITK 360
Query: 361 YVKKISR 367
YVKKISR
Sbjct: 361 YVKKISR 367
>gi|28849792|gb|AAN64549.1| putative oxidoreductase [Streptococcus
gordonii]
Length = 364
Score = 452 bits (1163), Expect = e-126
Identities = 229/365 (62%), Positives = 274/365 (74%), Gaps = 1/365 (0%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR 60
MKK+A+IGAG VG+T AYYLSK D++VTVFD G GQATKAAAGIISPWFSKRRNKAWYR
Sbjct: 1 MKKVAVIGAGIVGSTAAYYLSKSPDVEVTVFDEGKGQATKAAAGIISPWFSKRRNKAWYR 60
Query: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD 120
MARLGADFY L+ DL+ G +T FYQQTGV+LLKKDES+L+ L+ LA R ESPLIGD
Sbjct: 61 MARLGADFYQDLIVDLKAAGIQTDFYQQTGVYLLKKDESKLQELYDLAANRCEESPLIGD 120
Query: 121 LQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDN 180
L +LN+ EA FP+L G+++LLYASGGARVEGA LT LL+AS +++ +V T+
Sbjct: 121 LSLLNRQEAQEKFPDLQGFDRLLYASGGARVEGALLTETLLKASKAELVEKKVSLTVERE 180
Query: 181 GFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVMPEG 240
V G FD ++LA GAWL +IL Y+ DVRPQKGQLRD+ + T YPVVMPEG
Sbjct: 181 QLLVDGRSFDCVILAVGAWLGEILQPLGYKTDVRPQKGQLRDFRLAE-QTDDYPVVMPEG 239
Query: 241 ELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIR 300
ELDIIPF GKVSVGASHEND FDL +D VLD+ +++A Y P+L KA+ ERVG R
Sbjct: 240 ELDIIPFLAGKVSVGASHENDQGFDLTVDKTVLDQLQQEAETYLPRLSKAEILGERVGTR 299
Query: 301 AYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITK 360
AYTSDF+PFFG VP + YAASGLGS+GLT GPLIG +L Q+ L + LN DY I +
Sbjct: 300 AYTSDFAPFFGAVPDLLNVYAASGLGSSGLTTGPLIGRQLAQIALGEAGLLNTADYPIER 359
Query: 361 YVKKI 365
YVKK+
Sbjct: 360 YVKKV 364
>gi|15903504|ref|NP_359054.1| Conserved hypothetical protein
[Streptococcus pneumoniae R6]
gi|25509064|pir||D98054 conserved hypothetical protein spr1461
[imported] - Streptococcus pneumoniae (strain R6)
gi|15459118|gb|AAL00265.1| Conserved hypothetical protein
[Streptococcus pneumoniae R6]
Length = 370
Score = 446 bits (1147), Expect = e-124
Identities = 224/365 (61%), Positives = 283/365 (77%), Gaps = 1/365 (0%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR 60
MKK+ IIGAG VGAT AYYLS+E D++VTVFD+ GQATKAAAGIISPWFSKRRNKAWY+
Sbjct: 4 MKKVVIIGAGIVGATAAYYLSRESDLEVTVFDHEQGQATKAAAGIISPWFSKRRNKAWYK 63
Query: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD 120
MARLGADFY L+ DL+K G + FYQ++GVFLLKKDES+LE L+ LA +RR ESPLIG
Sbjct: 64 MARLGADFYVDLLADLEKSGQKIDFYQRSGVFLLKKDESKLEELYQLALQRREESPLIGQ 123
Query: 121 LQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDN 180
L IL+++ AN FP L G+++LLYASGGARV+G L LLEAS V ++K++V T+ +
Sbjct: 124 LAILDQASANELFPGLQGFDRLLYASGGARVDGQLLVTRLLEASHVKLVKEKVTLTLLSS 183
Query: 181 GFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVMPEG 240
G+++ FD+++LA+GAWL +L+ Y+VDVRPQKGQLRDY + + YPVVMPEG
Sbjct: 184 GYQIGEEVFDQVILATGAWLGDMLEPLGYEVDVRPQKGQLRDYQLAQ-DMEDYPVVMPEG 242
Query: 241 ELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIR 300
E D+IPF GK+S+GA+HENDM FDL +D +L + EE + ++ L +A + SERVGIR
Sbjct: 243 EWDLIPFAGGKLSLGATHENDMGFDLTVDETLLQQMEEATLTHYLILAEATSKSERVGIR 302
Query: 301 AYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITK 360
AYTSDFSPFFG VP + G YAASGLGS+GLT GP+IGY L QLI +KE L+ E+Y I
Sbjct: 303 AYTSDFSPFFGQVPGLTGVYAASGLGSSGLTTGPIIGYHLAQLIQDKELTLDPENYPIEN 362
Query: 361 YVKKI 365
YVK++
Sbjct: 363 YVKRV 367
>gi|15901448|ref|NP_346052.1| oxidoreductase, DadA family protein
[Streptococcus pneumoniae TIGR4]
gi|25389230|pir||C95187 oxidoreductase, DadA family protein SP1608
[imported] - Streptococcus pneumoniae (strain TIGR4)
gi|14973100|gb|AAK75692.1| oxidoreductase, DadA family protein
[Streptococcus pneumoniae TIGR4]
Length = 367
Score = 443 bits (1140), Expect = e-123
Identities = 224/365 (61%), Positives = 281/365 (76%), Gaps = 1/365 (0%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR 60
MKK+AIIGAG VGAT AYYLS+E D++VTVFD+ GQATKAAAGIISPWFSKRRNKAWY+
Sbjct: 1 MKKVAIIGAGIVGATAAYYLSRESDLEVTVFDHEQGQATKAAAGIISPWFSKRRNKAWYK 60
Query: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD 120
MARLGADFY L+ DL+K G E FYQ++GVFLLKKDES LE L+ LA +RR ESPLIG
Sbjct: 61 MARLGADFYVDLLADLEKSGQEIDFYQRSGVFLLKKDESNLEELYQLALQRREESPLIGQ 120
Query: 121 LQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDN 180
L ILN++ AN FP L G+++LLYASGGARV+G L LLE S V ++K++V T +
Sbjct: 121 LAILNQASANELFPGLQGFDRLLYASGGARVDGQLLVTRLLEVSHVKLVKEKVTLTPLAS 180
Query: 181 GFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVMPEG 240
G+++ +F++++LA+GAWL +L+ Y+VDVRPQKGQLRDY + + YPVVMPEG
Sbjct: 181 GYQIGEEEFEQVILATGAWLGDMLEPLGYEVDVRPQKGQLRDYQLAQ-DMEDYPVVMPEG 239
Query: 241 ELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIR 300
E D+IPF GK+S+GA+HENDM FDL +D +L + EE + ++ L +A + SERVGIR
Sbjct: 240 EWDLIPFAGGKLSLGATHENDMGFDLTVDETLLQQMEEATLTHYLILAEATSKSERVGIR 299
Query: 301 AYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITK 360
AYTSDFSPFFG VP + G YAASGLGS+GLT GP+IGY L QLI +KE L+ +Y I
Sbjct: 300 AYTSDFSPFFGQVPDLTGVYAASGLGSSGLTTGPIIGYHLAQLIQDKELTLDPLNYPIEN 359
Query: 361 YVKKI 365
YVK++
Sbjct: 360 YVKRV 364
>gi|24379859|ref|NP_721814.1| putative oxidoreductase [Streptococcus
mutans UA159]
gi|24377832|gb|AAN59120.1|AE014978_11 putative oxidoreductase
[Streptococcus mutans UA159]
Length = 367
Score = 428 bits (1101), Expect = e-119
Identities = 212/367 (57%), Positives = 273/367 (73%), Gaps = 1/367 (0%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR 60
MKK+AIIGAG VGAT AYYLSKEKDI VTVFD G GQATKAAAGII PWFSKRR+KAWYR
Sbjct: 1 MKKVAIIGAGIVGATAAYYLSKEKDIAVTVFDDGFGQATKAAAGIICPWFSKRRHKAWYR 60
Query: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD 120
+ARLGADFY L++DL++D + FY+Q+G FLLK L+ LF + KR+ +SPLIG
Sbjct: 61 LARLGADFYQTLLSDLKRDACKVDFYEQSGAFLLKNKAESLDELFEIGQKRKSQSPLIGH 120
Query: 121 LQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTI-TD 179
L+I +++ +L G+++ +YASG ARVEGA LT LL AS ++ +V + +D
Sbjct: 121 LEIQKRADLTGLLADLVGFDRCIYASGAARVEGASLTEALLNASHAKMVNKKVGLQVLSD 180
Query: 180 NGFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVMPE 239
+RV G + ++LA GAWL +IL+ Y++D+RPQKGQLRDY+F++ +T K+PV+MPE
Sbjct: 181 GNYRVNGKKYTAVLLACGAWLPQILEPLGYKIDIRPQKGQLRDYFFNSEDTEKFPVIMPE 240
Query: 240 GELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGI 299
GE+DIIPF +GKVSVGASHEND FDL ID VLDK E++A YFP+LK+A + +ERVG
Sbjct: 241 GEVDIIPFAHGKVSVGASHENDHGFDLQIDNSVLDKMEKEAQTYFPKLKEATSKNERVGT 300
Query: 300 RAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDIT 359
RAYT DF+PFFG V + YAASGLGS+GLT GPLIG +L +++L+KE + DY
Sbjct: 301 RAYTRDFAPFFGRVTGLANVYAASGLGSSGLTTGPLIGNQLVKMLLDKELDIQASDYSPD 360
Query: 360 KYVKKIS 366
KY+ K S
Sbjct: 361 KYIVKNS 367
>gi|19745994|ref|NP_607130.1| putative oxidoreductase [Streptococcus
pyogenes MGAS8232]
gi|19748157|gb|AAL97629.1| putative oxidoreductase [Streptococcus
pyogenes MGAS8232]
Length = 368
Score = 427 bits (1098), Expect = e-118
Identities = 213/360 (59%), Positives = 264/360 (73%)
Query: 3 KIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYRMA 62
KIAIIGAG VG+T AYYL + +VT+FD+G GQATKAAAGIISPWFSKRRNK WYRMA
Sbjct: 2 KIAIIGAGIVGSTAAYYLQQSDQKEVTIFDHGQGQATKAAAGIISPWFSKRRNKVWYRMA 61
Query: 63 RLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGDLQ 122
RLGADFY +L+ DL++DGF T FYQQ G+++LKK E +L L+ LA R++ESP+IG+L
Sbjct: 62 RLGADFYQQLINDLKEDGFATDFYQQNGIYVLKKQEEKLRDLYELALARKVESPIIGELA 121
Query: 123 ILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDNGF 182
I N+ E F L G++ LYASG ARVEGA L LL+ SG VI+ +V +G+
Sbjct: 122 IKNRKELGNDFKGLIGFDNCLYASGAARVEGAALCETLLKTSGYPVIRQKVTLKQQGSGY 181
Query: 183 RVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVMPEGEL 242
+ G FD+++LA+GAWL +L YQVDVRPQKGQL DY +I + YPVVMPEGE+
Sbjct: 182 EIAGHYFDQVILAAGAWLPDLLMPLGYQVDVRPQKGQLLDYDVHHIISDNYPVVMPEGEI 241
Query: 243 DIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAY 302
D+IPF+ GK+SVGASHEND +DL D++VL+K E QA+ Y P LK+A S RVGIRAY
Sbjct: 242 DLIPFNQGKISVGASHENDKGYDLEPDWQVLEKLEMQALTYLPLLKEATQKSCRVGIRAY 301
Query: 303 TSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITKYV 362
TSD+SPF+G VP ++ Y ASGLGS+GLTVGPLIGYEL QL+L E L DY Y+
Sbjct: 302 TSDYSPFYGQVPGLKNLYTASGLGSSGLTVGPLIGYELAQLLLGHEGLLTPSDYSPEPYL 361
>gi|21910181|ref|NP_664449.1| putative oxidoreductase [Streptococcus
pyogenes MGAS315]
gi|28896119|ref|NP_802469.1| putative oxidoreductase [Streptococcus
pyogenes SSI-1]
gi|21904374|gb|AAM79252.1| putative oxidoreductase [Streptococcus
pyogenes MGAS315]
gi|28811369|dbj|BAC64302.1| putative oxidoreductase [Streptococcus
pyogenes SSI-1]
Length = 368
Score = 423 bits (1088), Expect = e-117
Identities = 212/360 (58%), Positives = 263/360 (72%)
Query: 3 KIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYRMA 62
KIAIIGAG VG+T AYYL + +VT+FD+G GQATKAAAGIISPWFSKRRNK WYRMA
Sbjct: 2 KIAIIGAGIVGSTAAYYLQQSGQKEVTIFDHGQGQATKAAAGIISPWFSKRRNKVWYRMA 61
Query: 63 RLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGDLQ 122
RLGADFY +L+ DL++DGF T FYQQ G+++LKK E +L L+ LA R++ESP+IG+L
Sbjct: 62 RLGADFYQQLINDLKEDGFATDFYQQNGIYVLKKQEEKLRDLYELALARKVESPIIGELA 121
Query: 123 ILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDNGF 182
I N+ E F L G++ LYASG ARVEGA L LL+ASG VI +V +G+
Sbjct: 122 IKNRKELGNDFKGLIGFDNCLYASGAARVEGAALCETLLKASGYPVIHQKVTLKQQGSGY 181
Query: 183 RVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVMPEGEL 242
+ G FD+++LA+GAWL +L YQVDVRPQKGQL DY +I + YPVVMPEGE+
Sbjct: 182 EIAGHYFDQVILAAGAWLPDLLRPLGYQVDVRPQKGQLLDYDVHHIISDTYPVVMPEGEI 241
Query: 243 DIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAY 302
D+IPF+ GK+SVGASHEND +DL D++VL+K E QA+ Y P LK+A + RVGIRAY
Sbjct: 242 DLIPFNQGKISVGASHENDKGYDLEPDWQVLEKLEMQALTYLPLLKEATQKTCRVGIRAY 301
Query: 303 TSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITKYV 362
TSD+SPF+G V ++ Y ASGLGS+GLTVGPLIGYEL QL+L E L DY Y+
Sbjct: 302 TSDYSPFYGQVSGLKNLYTASGLGSSGLTVGPLIGYELAQLLLGHEGLLTPSDYSPEPYL 361
>gi|15674952|ref|NP_269126.1| putative oxidoreductase [Streptococcus
pyogenes]
gi|13622097|gb|AAK33847.1| putative oxidoreductase [Streptococcus
pyogenes M1 GAS]
Length = 368
Score = 422 bits (1084), Expect = e-117
Identities = 211/360 (58%), Positives = 262/360 (72%)
Query: 3 KIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYRMA 62
KIAIIGAG VG+T AYYL + +VT+FD+G GQATKAAAGIISPWFSKRRNK WYRMA
Sbjct: 2 KIAIIGAGIVGSTAAYYLQQSGQKEVTIFDHGQGQATKAAAGIISPWFSKRRNKVWYRMA 61
Query: 63 RLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGDLQ 122
RLGADFY +L+ DL++DGF T FYQQ G+++LKK E +L L+ LA R++ESP+IG+L
Sbjct: 62 RLGADFYQQLINDLKEDGFATDFYQQNGIYVLKKQEEKLRDLYELALARKVESPIIGELA 121
Query: 123 ILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDNGF 182
I N+ E F L G++ LYASG ARVEGA L LL+ASG VI+ +V +G+
Sbjct: 122 IKNRKELGNDFKGLIGFDNCLYASGAARVEGAALCETLLKASGYPVIRQKVTLKQQGSGY 181
Query: 183 RVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVMPEGEL 242
+ G FD+++LA+GAWL +L YQVDVRPQKGQL DY +I + YPVVMPEGE+
Sbjct: 182 EIAGHYFDQVILAAGAWLPDLLRPLGYQVDVRPQKGQLLDYDVHHIISDTYPVVMPEGEI 241
Query: 243 DIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAY 302
D+IPF+ GK+SVG SHEND +DL D++VL K E QA+ Y P LK+A + RVGIRAY
Sbjct: 242 DLIPFNQGKISVGTSHENDKGYDLEPDWQVLKKLEMQALTYLPLLKEATQKTCRVGIRAY 301
Query: 303 TSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITKYV 362
TSD+SPF+G V ++ Y ASGLGS+GLTVGPLIGYEL QL+L E L DY Y+
Sbjct: 302 TSDYSPFYGQVSGLKNLYTASGLGSSGLTVGPLIGYELAQLLLGHEGLLTPSDYSPEPYL 361
>gi|28378450|ref|NP_785342.1| oxidoreductase [Lactobacillus
plantarum WCFS1]
gi|28271286|emb|CAD64190.1| oxidoreductase [Lactobacillus plantarum
WCFS1]
Length = 368
Score = 270 bits (690), Expect = 3e-71
Identities = 153/360 (42%), Positives = 205/360 (56%), Gaps = 12/360 (3%)
Query: 2 KKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYRM 61
K++ IIG+G VGA AYYLS+ D+ VT++D G+GQATK +AGIISPW SKRRN+ WY++
Sbjct: 3 KQVTIIGSGIVGAVTAYYLSQNPDLNVTIYDEGIGQATKNSAGIISPWLSKRRNQRWYQL 62
Query: 62 ARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGDL 121
A+ GA Y ++V D Q G+ YQQ G + + D L++L+ LA KRR +P +G +
Sbjct: 63 AKAGAALYPEIVADTQM-GYSV--YQQAGTIVTRADPDDLQALYDLALKRRQAAPQMGTI 119
Query: 122 QILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLE-ASGVNVIKDEVHFTITDN 180
+ L E P L + ++ SGGARV+G LL+ A N+++ + + D
Sbjct: 120 EKLTAEEVQERIPLLTAPQPGVFVSGGARVDGDKFAHNLLKYAEKRNLVRHKGKVRLGDQ 179
Query: 181 G--FRVQG-IDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVM 237
G V G +D L+LA GAWL +L DVRPQKGQL + PV+M
Sbjct: 180 GQLLTVNGQQSYDTLILAVGAWLKPLLLPMKIVADVRPQKGQLIEMQLPETWADDVPVLM 239
Query: 238 PEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERV 297
PEGE D IPF K+ VGA+HEND +DL + V D + L K T +V
Sbjct: 240 PEGERDFIPFTRSKLVVGATHENDQGYDLQVSSLVEDDLFASGLKLDANLTKDQITQVKV 299
Query: 298 GIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYD 357
G RAYT DF+PFFGP+P ASGLGS+GLT GP+IG L + Q D+D
Sbjct: 300 GTRAYTRDFAPFFGPIPDNPHILVASGLGSSGLTTGPMIGKLLADYV-----QTGAHDWD 354
>gi|16080316|ref|NP_391143.1| similar to opine catabolism [Bacillus
subtilis]
gi|3915568|sp|O32159|YURR_BACSU Hypothetical oxidoreductase yurR
gi|7475684|pir||A70019 opine catabolism homolog yurR - Bacillus
subtilis
gi|2635760|emb|CAB15253.1| yurR [Bacillus subtilis subsp. subtilis
str. 168]
Length = 372
Score = 250 bits (638), Expect = 3e-65
Identities = 148/368 (40%), Positives = 211/368 (57%), Gaps = 13/368 (3%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYG-VGQATKAAAGIISPWFSKRRNKAWY 59
MK I+GAG +GA+ AY+L+K +VTV D GQAT AAAGI+ PW S+RRN+ WY
Sbjct: 1 MKSYIIVGAGILGASTAYHLAK-TGARVTVIDRKEPGQATDAAAGIVCPWLSQRRNQDWY 59
Query: 60 RMARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIG 119
++A+ GA +Y L+ L+KDG Y++ G + D S+L+ + A KRR ++P IG
Sbjct: 60 QLAKGGARYYKDLIHQLEKDGESDTGYKRVGAISIHTDASKLDKMEERAYKRREDAPEIG 119
Query: 120 DLQILNKSEANTHFPEL-DGYEQLLYASGGARVEGADLTRILLEAS---GVNVIKDEVHF 175
D+ L+ SE FP L DGYE ++ SG ARV G L R LL A+ G VIK
Sbjct: 120 DITRLSASETKKLFPILADGYES-VHISGAARVNGRALCRSLLSAAEKRGATVIKGNASL 178
Query: 176 -----TITDNGFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINT 230
T+T + D +++ +GAW +IL V QK Q+ + ++ +T
Sbjct: 179 LFENGTVTGVQTDTKQFAADAVIVTAGAWANEILKPLGIHFQVSFQKAQIMHFEMTDADT 238
Query: 231 GKYPVVMPEGELDIIPFDNGKVSVGASHENDMAF-DLNIDFKVLDKFEEQAIGYFPQLKK 289
G +PVVMP + I+ FDNG++ GA+HEND DL + + +A+ P L
Sbjct: 239 GSWPVVMPPSDQYILSFDNGRIVAGATHENDAGLDDLRVTAGGQHEVLSKALAVAPGLAD 298
Query: 290 ADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKEN 349
A RVG R +T F P G VP ++G YAA+GLG++GLT+GP +G EL +L+L K+
Sbjct: 299 AAAVETRVGFRPFTPGFLPVVGAVPNVQGLYAANGLGASGLTMGPFLGAELAKLVLGKQT 358
Query: 350 QLNLEDYD 357
+L+L YD
Sbjct: 359 ELDLSPYD 366
>gi|21400611|ref|NP_656596.1| DAO, FAD dependent oxidoreductase
[Bacillus anthracis A2012]
gi|30262692|ref|NP_845069.1| oxidoreductase, DadA family [Bacillus
anthracis str. Ames]
gi|30257324|gb|AAP26555.1| oxidoreductase, DadA family [Bacillus
anthracis str. Ames]
Length = 371
Score = 244 bits (624), Expect = 1e-63
Identities = 144/368 (39%), Positives = 205/368 (55%), Gaps = 10/368 (2%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFD-YGVGQATKAAAGIISPWFSKRRNKAWY 59
MK ++GAG +GA+ AY+L+K VT+ D VGQAT AAAGI+ PW S+RRNKAWY
Sbjct: 1 MKSYIVVGAGILGASTAYHLAK-AGANVTIVDRQQVGQATDAAAGIVCPWLSQRRNKAWY 59
Query: 60 RMARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIG 119
++ + GA +YS L+ L++DG Y + G L DE +L+ + A KRR ++P IG
Sbjct: 60 KIVKGGARYYSSLIQQLEEDGETDTGYNRVGAISLHIDEKKLDQMEERAYKRREDAPEIG 119
Query: 120 DLQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEAS---GVNVIKDEVHFT 176
++ L+ E FP L ++ SG ARV G L L+ A+ G IK +
Sbjct: 120 EITRLSAEETKKLFPALSEEYSCVHISGAARVNGRLLRNALISAAKKHGATFIKGDAVLV 179
Query: 177 ITDN---GFRV--QGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTG 231
N G +V + I +K+++ +GAW +IL+ V QKGQ+ N T
Sbjct: 180 REGNHITGVKVNDETILAEKVIVTAGAWANEILNPLGINFLVTFQKGQIVHLQMENTATE 239
Query: 232 KYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKAD 291
PVVMP + I+ FDNG V +GA+HEN+ FD + L + +A+ P L+ A
Sbjct: 240 NMPVVMPPNDQYILTFDNGHVVIGATHENETGFDHRVTAGGLHEVFHKALTVAPGLENAT 299
Query: 292 TTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQL 351
RVG R +T F P GP+P EG A+GLG++GLT GP +G EL +L L + +L
Sbjct: 300 MLETRVGFRPFTPGFLPVIGPLPNFEGILVANGLGASGLTAGPYLGSELAKLALGQPIEL 359
Query: 352 NLEDYDIT 359
+L DYD+T
Sbjct: 360 DLNDYDVT 367
>gi|16803949|ref|NP_465434.1| similar to oxidoreductases [Listeria
monocytogenes EGD-e]
gi|25516127|pir||AF1313 oxidoreductases homolog lmo1910 [imported]
- Listeria monocytogenes (strain EGD-e)
gi|16411363|emb|CAC99988.1| lmo1910 [Listeria monocytogenes]
Length = 368
Score = 244 bits (623), Expect = 2e-63
Identities = 150/374 (40%), Positives = 216/374 (57%), Gaps = 16/374 (4%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYG-VGQATKAAAGIISPWFSKRRNKAWY 59
M+K+ IIG G VGA+ AY LSKE ++QVT+ D GQAT+AAAGII PW SKRRNK WY
Sbjct: 1 MQKVVIIGGGIVGASAAYLLSKE-NVQVTLIDSDEAGQATRAAAGIICPWLSKRRNKYWY 59
Query: 60 RMARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIG 119
+A+ A FY +L L+ D Y+Q GV L++ E +L LF LA +RRL++ ++G
Sbjct: 60 ELAKNSAAFYKELAETLEGDTGRDSGYKQVGVLALRQTEEKLAELFNLARERRLDAEVMG 119
Query: 120 DLQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEAS---GVNVIKDEVHFT 176
++ L+++E FP + +Y SG ARV G LL A+ GV + HF+
Sbjct: 120 EVAKLSEAETKQRFPLVKSGFGSVYVSGAARVNGGLFCETLLYAAKENGVKIKAGRAHFS 179
Query: 177 ITDNGFRVQGID--FDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYP 234
+D + G +DKL+LA+GAWL +L + +Q DV QKGQL + FS T +P
Sbjct: 180 -SDGEVVIDGEKEHYDKLILATGAWLKDLLQDAGFQTDVLAQKGQLLELNFSEFQTDDWP 238
Query: 235 VVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTS 294
V++P I+PFDNGK+ VGA+HE F+ + + + + + Q + D S
Sbjct: 239 VILPPSAKSIVPFDNGKIIVGATHEKAAGFNT----EPTAEGKAEILTEVSQFMEGDLAS 294
Query: 295 E----RVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQ 350
+ VG R YT DF+P G +P E + A+GLG++GLT GP +G L L L +
Sbjct: 295 KVAHVSVGTRPYTPDFTPIIGQLPGFESVFLANGLGASGLTTGPYVGRILADLALGNASD 354
Query: 351 LNLEDYDITKYVKK 364
LE+Y+ +KY+ +
Sbjct: 355 FVLENYEPSKYISR 368
>gi|29375049|ref|NP_814202.1| oxidoreductase, DadA family
[Enterococcus faecalis V583]
gi|29342508|gb|AAO80273.1| oxidoreductase, DadA family
[Enterococcus faecalis V583]
Length = 371
Score = 244 bits (622), Expect = 2e-63
Identities = 158/377 (41%), Positives = 220/377 (57%), Gaps = 25/377 (6%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR 60
MKKIAIIG G +G TLA YL +K +TV+D G+GQATKA+AGIISPW SKRRNK WY+
Sbjct: 1 MKKIAIIGGGIIGMTLANYLDPQK-FDITVYDEGLGQATKASAGIISPWLSKRRNKKWYQ 59
Query: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD 120
+AR GA + KLV D Q Y+Q+G +L+ + L L LA++R+ +P IG+
Sbjct: 60 LAREGAALFPKLVKDFQ---LTEDIYRQSGTVILRP-AAALADLAHLAEERKQTAPEIGE 115
Query: 121 LQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRIL---LEASGVNVIKDEVHFTI 177
+ +L+ + P L L+ SGG R++G L EA GV HF
Sbjct: 116 ITMLSAVQTAKFLPLLKETPS-LFISGGGRLDGPAYLNHLQKRAEAKGVTFCSQRAHFRQ 174
Query: 178 TDNGFRV------QGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTG 231
+ G+ + + +DF L L G L ++L N VD+RPQKGQL + N+
Sbjct: 175 LNQGWEIVTNSEKKSVDF--LALTPGPHLKELLTTLNLSVDIRPQKGQLLVFETPFTNSQ 232
Query: 232 KYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKAD 291
++PV M +GE D+IPF+ GK+ +GA+HEN+ A+DL + + F++ G P LK+A+
Sbjct: 233 QWPVAMLDGEADLIPFNQGKILLGATHENEQAWDLE---ETVSAFQQLTSGTAPFLKEAE 289
Query: 292 TTSE-----RVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILN 346
+ RVG RAYTSDF+PFFGP+P M ASGLGS+GLT GP IGY+L +
Sbjct: 290 QLFKQPMHYRVGTRAYTSDFAPFFGPLPEMPHLVVASGLGSSGLTTGPFIGYQLAEYFNT 349
Query: 347 KENQLNLEDYDITKYVK 363
+ L +++YVK
Sbjct: 350 GAFKGELYQKPLSQYVK 366
>gi|30020845|ref|NP_832476.1| D-amino acid dehydrogenase small
subunit [Bacillus cereus ATCC 14579]
gi|29896397|gb|AAP09677.1| D-amino acid dehydrogenase small subunit
[Bacillus cereus ATCC 14579]
Length = 371
Score = 238 bits (607), Expect = 1e-61
Identities = 139/369 (37%), Positives = 200/369 (53%), Gaps = 14/369 (3%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFD-YGVGQATKAAAGIISPWFSKRRNKAWY 59
MK ++G+G +GA+ AY+L+K VT+ D +GQAT A AGI+ PW S+RRNKAWY
Sbjct: 1 MKSYIVVGSGILGASTAYHLAK-AGANVTIVDRQQLGQATDAGAGIVCPWLSQRRNKAWY 59
Query: 60 RMARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIG 119
++ + GA +YS L+ L++DG Y + G L DE +L+ + A KRR ++P IG
Sbjct: 60 KIVKGGARYYSSLIQQLEEDGETDTGYNRVGAISLHTDEKKLDQMEERAYKRREDAPEIG 119
Query: 120 DLQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEAS---GVNVIKDEVHFT 176
++ L+ E FP L ++ SG ARV G L L+ A+ G IK +
Sbjct: 120 EITRLSAEETKKLFPALSDEYSSVHISGAARVNGRLLRNALISAAKKHGATFIKGDA--I 177
Query: 177 ITDNGFRVQGIDF-------DKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNIN 229
+ G + G+ +K+++ GAW +IL V QKGQ+ N
Sbjct: 178 LVREGNHITGVTVNDETILAEKVIVTVGAWANEILKPLGINFLVTFQKGQIVHLQIENTA 237
Query: 230 TGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKK 289
T PVVMP + I+ FDNG V +GA+HEND FD + L + +A+ P L+
Sbjct: 238 TENMPVVMPPNDQYILTFDNGHVVIGATHENDTGFDHRVTAGGLHEVFHKALAVAPGLEN 297
Query: 290 ADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKEN 349
A RVG R +T F P GP+P EG A+GLG++GLT GP +G EL +L L +
Sbjct: 298 ATMLETRVGFRPFTPGFLPVIGPLPNFEGILVANGLGASGLTAGPYLGAELAKLALGQTI 357
Query: 350 QLNLEDYDI 358
+L+L DYD+
Sbjct: 358 ELDLNDYDV 366
>gi|22990746|ref|ZP_00035551.1| hypothetical protein [Enterococcus
faecium]
Length = 370
Score = 233 bits (594), Expect = 4e-60
Identities = 161/376 (42%), Positives = 212/376 (55%), Gaps = 21/376 (5%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR 60
M+KIAIIG G +G TLA YL K V +FD G GQATKA+AGIISPW SKRRNK WYR
Sbjct: 1 MEKIAIIGGGIIGMTLASYLDTSK-FNVALFDEGTGQATKASAGIISPWLSKRRNKQWYR 59
Query: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD 120
+A+ GA F+ KL+ D Q D Y Q+G LL+ E L L LA+KR+ E+P IG+
Sbjct: 60 LAKDGAAFFPKLIKDFQLD---QTIYAQSGTLLLRP-EKDLAELAVLAEKRKEEAPEIGN 115
Query: 121 LQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRIL---LEASGVNVIKDEVHFTI 177
++ L+ + + P L L SGG R++G L L + I+ +V
Sbjct: 116 IEWLSPEQTSQALPLLKPAVS-LRISGGGRLDGKAYLEHLGQRLAQKQMEQIQAKVTLHK 174
Query: 178 TDNGFRVQG----IDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKY 233
+ + ++G D+++L G L +L E Y D+RPQKGQL + S + +
Sbjct: 175 KSDSWLIKGPFGEYTADRVILTPGPALKPLLQELGYAADIRPQKGQLLAFQTSYKMSQDW 234
Query: 234 PVVMPEGELDIIPFDNGKVSVGASHENDMAFDL---NIDFKVLDKFEEQAIGYFPQLKKA 290
PV M +GE D IPF +GK+ +GA+HEND +DL + +K L K EQ + Q+K
Sbjct: 235 PVAMLDGEADFIPFMDGKILLGATHENDQGWDLAPTSEAYKGLTKSTEQFLTDPDQIKNW 294
Query: 291 DTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQ 350
RVG RAYTSDFSPFFG +P AASGLGS+GLT GP IGY L +
Sbjct: 295 -PYEFRVGTRAYTSDFSPFFGVLPDDPSLLAASGLGSSGLTTGPYIGYLLANFL--NTGH 351
Query: 351 LNLEDY--DITKYVKK 364
EDY DI+ Y+ K
Sbjct: 352 WPTEDYQKDISTYITK 367
>gi|16801090|ref|NP_471358.1| similar to oxidoreductases [Listeria
innocua]
gi|25516425|pir||AF1685 oxidoreductases homolog lin2024 [imported]
- Listeria innocua (strain Clip11262)
gi|16414525|emb|CAC97254.1| lin2024 [Listeria innocua]
Length = 368
Score = 233 bits (593), Expect = 5e-60
Identities = 143/370 (38%), Positives = 209/370 (55%), Gaps = 8/370 (2%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYG-VGQATKAAAGIISPWFSKRRNKAWY 59
M+KI IIG G VGA+ AY LSKE ++QVT+ D GQAT+AAAGII PW SKRRNK WY
Sbjct: 1 MQKIVIIGGGIVGASAAYLLSKE-NVQVTLIDSNEPGQATRAAAGIICPWLSKRRNKYWY 59
Query: 60 RMARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIG 119
+A+ A FY ++ L ++ Y+Q GV L++ E + LF LA +R+ +P++G
Sbjct: 60 ELAKNSAAFYKEIAESLSEETGRDSGYKQVGVLALRQTEEKATELFNLAMERQAGAPVMG 119
Query: 120 DLQILNKSEANTHFPELDGYEQLLYASGGARVEGA---DLTRILLEASGVNVIKDEVHFT 176
D++ L+++E FP + +Y SG ARV G + R + +GV + HF+
Sbjct: 120 DIEKLSEAETKQKFPLVKPGFSSVYVSGAARVNGGLFCETLRYAAKENGVEIKTGLAHFS 179
Query: 177 ITDNGFRVQG--IDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYP 234
V G +DKL++++GAWL +L E + DV QKGQL + FS T ++P
Sbjct: 180 -PKGEVLVDGEKESYDKLIISAGAWLPNLLQEAGFHTDVLAQKGQLLELDFSEYETAEWP 238
Query: 235 VVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTS 294
V++P I+PFDNGK+ VGA+HE F++ + + + + + +
Sbjct: 239 VILPPSAKSIVPFDNGKIIVGATHEKAAGFNIEPTAEGKAEILAEVSKFMEGELEHKIAN 298
Query: 295 ERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLE 354
VG R YT DF+P G +P + + A+GLG++GLT GP +G L L L L LE
Sbjct: 299 VAVGTRPYTPDFAPLIGQLPGFDSIFLANGLGASGLTTGPYVGKLLADLALLNTTDLALE 358
Query: 355 DYDITKYVKK 364
+YD KY+ K
Sbjct: 359 NYDPRKYISK 368
>gi|25401962|pir||A86859 hypothetical protein yteB [imported] -
Lactococcus lactis subsp. lactis (strain IL1403)
gi|12724906|gb|AAK05971.1|AE006417_3 HYPOTHETICAL PROTEIN
[Lactococcus lactis subsp. lactis]
Length = 373
Score = 219 bits (558), Expect = 5e-56
Identities = 153/372 (41%), Positives = 212/372 (56%), Gaps = 17/372 (4%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR 60
MKKIAIIG G +G TLA YL +K +++FD QATKA+AGIISPW SKRRNK WY+
Sbjct: 2 MKKIAIIGGGIIGMTLANYLDTDK-FDISLFDDEKNQATKASAGIISPWLSKRRNKKWYQ 60
Query: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD 120
+A+ GA F+ K+ D + Y++ G L++ +S L L LA +R+ E+P +G+
Sbjct: 61 LAKDGAAFFEKMKNDFE---LTEDVYEKCGTLFLRQ-KSDLIDLEKLAIERKKEAPEMGE 116
Query: 121 LQILNKSEANTHFPELDGYEQLLYASGGARVEG-ADLTRILLEAS--GVNVIKDEVHFTI 177
++ L++ E FP L E LY SGGAR++G A L+ + A GV +
Sbjct: 117 IKRLSEEETVALFPLLKPRES-LYLSGGARLDGKAYLSSLKKRAQKRGVKFYSERATIAR 175
Query: 178 TDNGFRV--QGID--FDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKY 233
+ ++V +G+ D LVL G L ++L+ QVDV+PQKGQL + ++ T +
Sbjct: 176 ALDKWQVIHEGVTEVVDDLVLCPGPALKELLESIGTQVDVKPQKGQLISFQ-TDFETKNW 234
Query: 234 PVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTT 293
PV+ EG DIIPF NG+V +GA+HEN+ +DL+ + + E Y K D
Sbjct: 235 PVLFLEGAADIIPFQNGQVLLGATHENEEGWDLSESQEAFESLTEGVKSYLSDTKLIDFP 294
Query: 294 SE-RVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLN 352
RVG RAY+SDFSPFFGP P AS LGS+GLT GP I Y L Q + E +
Sbjct: 295 YHYRVGTRAYSSDFSPFFGPHPDFSSLAFASALGSSGLTTGPYIAYLLAQYFNHPEISWD 354
Query: 353 LEDY--DITKYV 362
+Y DI Y+
Sbjct: 355 SSNYQKDIKNYI 366
>gi|30024057|ref|NP_268030.2| hypothetical protein [Lactococcus
lactis subsp. lactis]
Length = 372
Score = 219 bits (557), Expect = 8e-56
Identities = 153/372 (41%), Positives = 212/372 (56%), Gaps = 17/372 (4%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR 60
MKKIAIIG G +G TLA YL +K +++FD QATKA+AGIISPW SKRRNK WY+
Sbjct: 1 MKKIAIIGGGIIGMTLANYLDTDK-FDISLFDDEKNQATKASAGIISPWLSKRRNKKWYQ 59
Query: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD 120
+A+ GA F+ K+ D + Y++ G L++ +S L L LA +R+ E+P +G+
Sbjct: 60 LAKDGAAFFEKMKNDFE---LTEDVYEKCGTLFLRQ-KSDLIDLEKLAIERKKEAPEMGE 115
Query: 121 LQILNKSEANTHFPELDGYEQLLYASGGARVEG-ADLTRILLEAS--GVNVIKDEVHFTI 177
++ L++ E FP L E LY SGGAR++G A L+ + A GV +
Sbjct: 116 IKRLSEEETVALFPLLKPRES-LYLSGGARLDGKAYLSSLKKRAQKRGVKFYSERATIAR 174
Query: 178 TDNGFRV--QGID--FDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKY 233
+ ++V +G+ D LVL G L ++L+ QVDV+PQKGQL + ++ T +
Sbjct: 175 ALDKWQVIHEGVTEVVDDLVLCPGPALKELLESIGTQVDVKPQKGQLISFQ-TDFETKNW 233
Query: 234 PVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTT 293
PV+ EG DIIPF NG+V +GA+HEN+ +DL+ + + E Y K D
Sbjct: 234 PVLFLEGAADIIPFQNGQVLLGATHENEEGWDLSESQEAFESLTEGVKSYLSDTKLIDFP 293
Query: 294 SE-RVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLN 352
RVG RAY+SDFSPFFGP P AS LGS+GLT GP I Y L Q + E +
Sbjct: 294 YHYRVGTRAYSSDFSPFFGPHPDFSSLAFASALGSSGLTTGPYIAYLLAQYFNHPEISWD 353
Query: 353 LEDY--DITKYV 362
+Y DI Y+
Sbjct: 354 SSNYQKDIKNYI 365
>gi|23098470|ref|NP_691936.1| iminodiacetate oxidase [Oceanobacillus
iheyensis HTE831]
gi|22776696|dbj|BAC12971.1| iminodiacetate oxidase [Oceanobacillus
iheyensis HTE831]
Length = 375
Score = 207 bits (526), Expect = 3e-52
Identities = 132/372 (35%), Positives = 217/372 (57%), Gaps = 13/372 (3%)
Query: 2 KKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYG-VGQATKAAAGIISPWFSKRRNKAWYR 60
KK+ +IG G VGA+ AYYL+K+ VT+ D GQAT AAAGII PW S+RRNK WY+
Sbjct: 3 KKVIVIGGGIVGASTAYYLAKQ-GAAVTLIDRNDQGQATDAAAGIICPWISQRRNKDWYQ 61
Query: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD 120
+A+ GA Y+KL+ +L+ G Y++ G L + +LE + A KR+ +P IG+
Sbjct: 62 LAKSGAALYTKLIAELKSLGETNTGYEKVGAISLHTETKKLEGMVERATKRKETAPEIGE 121
Query: 121 LQILNKSEANTHFPEL-DGYEQLLYASGGARVEGADLTRILLEA---SGVNVIKDEVHFT 176
+ LN+SE P L +GY +Y SG ARV G +L + L A GV +I+ + +
Sbjct: 122 ISTLNESETLNRVPILKEGYRS-VYISGAARVNGQELLQALKRAGKLKGVKIIEGDASLS 180
Query: 177 ITDNGFRVQGID------FDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINT 230
I DN + +D DK++LA+GAW+++++ + V PQ+ Q+ ++T
Sbjct: 181 IEDNQIKGVHVDNQYTLPADKVILANGAWMSELVKPFGIDLQVFPQRAQITHVKLPGVDT 240
Query: 231 GKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKA 290
K+PV+MP G ++ + ++ +G+++E+++ FD I + + ++A P+L+ +
Sbjct: 241 TKWPVIMPPGNQYMLSLPDNRIVLGSTYEDNVGFDYRITAGKVHEILDKAFNIAPELENS 300
Query: 291 DTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQ 350
+VG R +T P GP+ ++G Y A+GLG TGLT+GP +G +L ++ L +
Sbjct: 301 TVVETKVGFRPFTPGSLPIVGPLHQIKGVYLANGLGGTGLTMGPFVGQQLAKIALGELPD 360
Query: 351 LNLEDYDITKYV 362
+ LE+YD++K +
Sbjct: 361 IELENYDVSKAI 372
>gi|9957197|gb|AAG09254.1|AF176664_3 iminodiacetate oxidase
[EDTA-degrading bacterium BNC1]
Length = 371
Score = 184 bits (467), Expect = 2e-45
Identities = 114/366 (31%), Positives = 188/366 (51%), Gaps = 10/366 (2%)
Query: 3 KIAIIGAGAVGATLAYYLSKEKDIQVTVFDYG-VGQATKAAAGIISPWFSKRRNKAWYRM 61
++ IIGAG +GA+ AY+L++ QV + D G+AT A AG++ PW ++ + WY +
Sbjct: 2 RVLIIGAGILGASAAYHLAR-LGAQVEIIDQNHPGKATLAGAGVVCPWATEADDPDWYLL 60
Query: 62 ARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGDL 121
GA +Y L+ +L+ G Y + G +L +D ++L+++ +R ++P G +
Sbjct: 61 YARGARYYGTLIEELRGQGETELGYSRVGALVLAEDRARLDTIEGRISRRIKDAPEAGTV 120
Query: 122 QILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLE---ASGVNVIKDEVHFTIT 178
+ L EA FP L + ++ GGARV+G L +L +SG + D V +
Sbjct: 121 RRLGAGEAKRLFPPLRDDLEAIHIPGGARVDGRLLAASMLRVAISSGATLRNDYVSLRLN 180
Query: 179 DNGFRVQGID-----FDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKY 233
D G D D++++ +GAW A+IL + V PQKGQ+ + + T +
Sbjct: 181 DGRAECLGSDGRPIPADEIIVTAGAWAAQILALLGLRHPVVPQKGQIIHLHLPGVATSGW 240
Query: 234 PVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTT 293
PVV+P ++ FD+ +V VGA+ E+ FD + + + + +G P L A
Sbjct: 241 PVVLPMNSYYMLAFDDSRVVVGATREDGSGFDYRVTARGQLEVLQAGLGIAPGLADATHI 300
Query: 294 SERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNL 353
RVG R S P G VP + G +GLG++GLTVGP G+ L +++ + ++ L
Sbjct: 301 ETRVGFRPAGSAMRPILGRVPQIAGLTIGNGLGASGLTVGPFAGHLLAGVVMGEPAEVPL 360
Query: 354 EDYDIT 359
E Y T
Sbjct: 361 ERYSPT 366
>gi|23104231|ref|ZP_00090699.1| hypothetical protein [Azotobacter
vinelandii]
Length = 364
Score = 100 bits (248), Expect = 5e-20
Identities = 100/362 (27%), Positives = 161/362 (43%), Gaps = 27/362 (7%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYG-VGQATK-AAAGIISPWFSKRRNKAW 58
M ++ ++G GA+G A L+ E ++V + D G +GQ + A GI+SP + R + A
Sbjct: 1 MMRVLVVGGGAIGMLSAQRLA-EAGLEVRLLDQGPLGQESSWAGGGIVSPLYPWRYSPAV 59
Query: 59 YRMARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLI 118
+A DFY L L+ + TG++ L ++ +A +KR LE+ I
Sbjct: 60 TALAHWSQDFYPALGERLRHETGIDPEVHVTGLYWLDLEDEAEALAWAAREKRPLEAVDI 119
Query: 119 GDLQILNKSEANTHFPELD-GYEQLLYASGGARVEGADLTRILLEASG--VNVIKDEVHF 175
G + + P L G+ + L+ SG A V L L A NV+ +E
Sbjct: 120 GSV--------HQAVPALGPGFSRALFMSGVANVRNPRLLASLHAALLRMPNVVLEESRA 171
Query: 176 T--ITDNGFRVQGIDF-------DKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFS 226
G R+ G+ D++V+A+GAW K+L ++ V+P KGQ+ Y +
Sbjct: 172 ATGFVREGGRIVGVSTPSGDLRADRVVVAAGAWSGKLLATLGLELPVKPMKGQMILYKCA 231
Query: 227 NINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQ 286
+ +VM +G IP +G + VG++ E D+ FD L + A P
Sbjct: 232 EDFLPR--MVMADGRY-AIPRRDGHILVGSTLE-DVGFDKTPTEDALASLKASAEALLPA 287
Query: 287 LKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILN 346
L A+ G+R + + P+ GPVP EG + G GL + P L+L
Sbjct: 288 LAGAEVVKHWAGLRPGSPEGIPYIGPVPGCEGLWLNCGHFRNGLVLAPASCQLFADLLLE 347
Query: 347 KE 348
+E
Sbjct: 348 RE 349
>gi|23470037|ref|ZP_00125371.1| hypothetical protein [Pseudomonas
syringae pv. syringae B728a]
Length = 367
Score = 96.7 bits (239), Expect = 6e-19
Identities = 99/362 (27%), Positives = 175/362 (47%), Gaps = 29/362 (8%)
Query: 2 KKIAIIGAGAVGATLAYYLSKEKDIQVTVFD-YGVGQATK-AAAGIISPWFSKRRNKAWY 59
+KI I+G G +G A+ L+ E+ + V + D GVGQ + A GI+SP + R + A
Sbjct: 4 QKIVIVGGGVIGLLTAFNLASEQ-VSVVLLDRSGVGQESSWAGGGIVSPLYPWRYSPAVT 62
Query: 60 RMARLGADFYSKLVTD-LQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLI 118
+A DFY +L L + G + + + +TG++ L D+ Q +A+ +KR L
Sbjct: 63 ALAHWSQDFYPRLAERLLAQTGIDPEVH-KTGLYWLDLDDEQSALEWAVREKRPLNR--- 118
Query: 119 GDLQILNKSEANTHFPEL-DGYEQLLYASGGARVEGADLTRILLEA--SGVNV-IKDEVH 174
++ S N P L +GY + +Y + A V L + L A + NV I+++
Sbjct: 119 -----VDISAVNDAVPVLGEGYSRAIYMADVANVRNPRLVKSLKAALLAMPNVEIREQCE 173
Query: 175 FT-ITDNGFRVQGIDF-------DKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFS 226
+ T G R+ G+ D+++LA+GAW ++L ++ V P KGQ+ Y +
Sbjct: 174 VSGFTREGSRISGVQTPAGDITGDRVILAAGAWSGELLKTLGLELPVEPVKGQMILYKCA 233
Query: 227 NINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQ 286
+ +V+ +G IP +G + +G++ E++ FD L+ + A+ P
Sbjct: 234 SDFLSS--MVLAKGRY-AIPRRDGHILIGSTLEHE-GFDKTTTQAALESLKASAVELLPP 289
Query: 287 LKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILN 346
L A+ S+ G+R + + PF GP+ +G + G GL + P + L+L+
Sbjct: 290 LAHAEPVSQWAGLRPGSPEGIPFIGPLDGFDGLWLNCGHYRNGLVLAPASCQLITDLLLD 349
Query: 347 KE 348
+E
Sbjct: 350 RE 351
>gi|28868045|ref|NP_790664.1| oxidoreductase, FAD-binding
[Pseudomonas syringae pv. tomato str. DC3000]
gi|28851281|gb|AAO54359.1| oxidoreductase, FAD-binding [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 367
Score = 89.0 bits (219), Expect = 1e-16
Identities = 97/362 (26%), Positives = 170/362 (46%), Gaps = 29/362 (8%)
Query: 2 KKIAIIGAGAVGATLAYYLSKEKDIQVTVFD-YGVGQATK-AAAGIISPWFSKRRNKAWY 59
+KI I+G G +G A+ L+ E+ + V + D GVGQ + A GI+SP + R + A
Sbjct: 4 QKIVIVGGGVIGLLTAFNLASEQ-VNVVLLDRSGVGQESSWAGGGIVSPLYPWRYSPAVT 62
Query: 60 RMARLGADFYSKLVTDL-QKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLI 118
+A DFY L L + G + + + +TG++ L D+ Q +A + R L S
Sbjct: 63 ALAHWSQDFYPHLAERLFAQTGIDPEVH-KTGLYWLDLDDEQAALEWAARENRPLSS--- 118
Query: 119 GDLQILNKSEANTHFPEL-DGYEQLLYASGGARVEGADLTRILLEA--SGVNV-IKDEVH 174
++ S N P L +GY + ++ + A V L + L A + NV I+++ +
Sbjct: 119 -----VDISAVNDAVPALGEGYSRAIHMADVANVRNPRLVKSLKAALLAMPNVDIREQCN 173
Query: 175 FT-ITDNGFRVQGIDF-------DKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFS 226
+ G RV G+ D+++L +GAW +L + V P KGQ+ Y +
Sbjct: 174 VSGFVREGSRVSGVSTPSGDVTGDRVILTAGAWSGDLLKTLGLDLPVEPVKGQMILYKCA 233
Query: 227 NINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQ 286
+ +V+ +G IP +G + +G++ E++ FD L+ + AI P+
Sbjct: 234 SDFLSS--MVLAKGRY-AIPRRDGHILIGSTLEHE-GFDKTTTQAALESLKASAIELIPE 289
Query: 287 LKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILN 346
L A+ ++ G+R + + PF GP+ +G + G GL + P L L+L
Sbjct: 290 LANAEPIAQWAGLRPGSPEGIPFIGPLAGFDGLWLNCGHYRNGLVLAPASCQLLTDLLLG 349
Query: 347 KE 348
++
Sbjct: 350 RK 351
>gi|32423746|gb|AAP81270.1| putative D-amino acid oxidase
[Pseudomonas aeruginosa]
Length = 358
Score = 84.0 bits (206), Expect = 4e-15
Identities = 99/361 (27%), Positives = 162/361 (44%), Gaps = 35/361 (9%)
Query: 6 IIGAGAVGATLAYYLSKEKDIQVTVFDYGVG--QATKAAAGIISPWFSKRRNKAWYRMAR 63
++GAG +G A L+ ++VT+ + G +A+ A GI+SP + R + A +A
Sbjct: 1 MVGAGVIGLLTARELAL-AGLRVTLVERGESGREASWAGGGIVSPLYPWRYSPAVTALAH 59
Query: 64 LGADFYSKLVTD-LQKDGFETKFYQQTGVFLLKKDESQLESL-FALADKRRL-ESPLIGD 120
DFY L L + G + + + G++ L D+ Q E+L +A R L E P+
Sbjct: 60 WSQDFYPALGQRLLDETGLDPEVH-TVGLYWLDLDD-QTEALQWARNHTRPLKEVPI--- 114
Query: 121 LQILNKSEANTHFPELD-GYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITD 179
EA P L G+++ +Y SG A V L R L AS E+H
Sbjct: 115 ------EEAYAAVPGLGAGFQRAVYMSGVANVRNPRLARS-LRASLQQFANLELHEQTEV 167
Query: 180 NGF-----RVQG-------IDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSN 227
G+ RV G I DK++LA+GAW ++L ++ V P KGQ+ Y +
Sbjct: 168 RGWLRDGDRVVGVATSRGEIRGDKVLLAAGAWSGELLKPLGLELPVVPVKGQMILYKCAA 227
Query: 228 INTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQL 287
+ +V+ +G IP +G + +G++ E+ FD + L+ A P+L
Sbjct: 228 DFLPR--MVLAKGRY-AIPRRDGHILIGSTLEHS-GFDKTPTDEALESLRASAAELLPEL 283
Query: 288 KKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNK 347
+ G+R + + P+ GPVP +G + +G GL + P L L+ +
Sbjct: 284 ADMQPVAHWAGLRPGSPEGIPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADLMSGR 343
Query: 348 E 348
E
Sbjct: 344 E 344
>gi|30248661|ref|NP_840731.1| NAD binding site:D-amino acid oxidase
[Nitrosomonas europaea ATCC 19718]
gi|30180256|emb|CAD84561.1| NAD binding site:D-amino acid oxidase
[Nitrosomonas europaea ATCC 19718]
Length = 368
Score = 84.0 bits (206), Expect = 4e-15
Identities = 96/377 (25%), Positives = 153/377 (40%), Gaps = 44/377 (11%)
Query: 6 IIGAGAVGATLAYYLSKEKDIQVTVFDYGVG--QATKAAAGIISPWFSKRRNKAWYRMAR 63
+IGAG +G + A L E+ VT+ D +A+ A GI+SP + + + R+A
Sbjct: 7 VIGAGIIGLSTALRL-LEEGASVTLLDRREAGCEASWAGGGILSPLYPWNYSDSVTRLAA 65
Query: 64 LGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRR---LESPLIGD 120
Y + L YQ G+ +L + + + A R L S G
Sbjct: 66 YSMSRYPEWTAALNTATGIDPEYQICGLVILPPCDPEAAVNWCSAHAVRLTYLSSSHHGG 125
Query: 121 LQI--LNKSEANTH---FPELDGYE-----QLLYAS----GGARVEGADLTRILLEASGV 166
L +N + N PE+ Q LY GG +E ++ + + V
Sbjct: 126 LSWAHINDEQGNAQALFLPEVAQVRNPRLLQALYKRIRQLGGKIIEHCEVQELEISGQKV 185
Query: 167 NVIK--DEVHFTITDNGFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYY 224
+ I+ E H D+ +L++GAW KIL EH + ++P +GQ+ Y
Sbjct: 186 HAIRTPSEKHSA-------------DQYILSAGAWSRKILGEHALNLAIKPIRGQMLLY- 231
Query: 225 FSNINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYF 284
+ ++ + +L +IP +G + VG++ E D FD I ++ A
Sbjct: 232 --RLPGNPLCSIVLQRDLYLIPRRDGHLLVGSTIE-DTGFDKQITLDAKNRLSSWAEEIL 288
Query: 285 PQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLI 344
PQLK G+R T D P GP P +E Y SG G+T+ P L I
Sbjct: 289 PQLKNTPLLKHWSGLRPATPDNIPIIGPHPFLENLYINSGHFRYGVTMAPGSAEILVNEI 348
Query: 345 LNKENQLNLEDYDITKY 361
L + + +D+T Y
Sbjct: 349 LKRT-----QPFDVTPY 360
>gi|26987349|ref|NP_742774.1| oxidoreductase, FAD-binding
[Pseudomonas putida KT2440]
gi|24982001|gb|AAN66238.1|AE016252_6 oxidoreductase, FAD-binding
[Pseudomonas putida KT2440]
Length = 365
Score = 81.3 bits (199), Expect = 2e-14
Identities = 100/350 (28%), Positives = 157/350 (44%), Gaps = 33/350 (9%)
Query: 2 KKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYG-VG-QATKAAAGIISPWFSKRRNKAWY 59
K++ ++G G +G A+ L+ K QV V D G VG +++ A GI+SP + R + A
Sbjct: 3 KQVVVVGGGVIGLLTAFNLAA-KVGQVVVCDQGEVGRESSWAGGGIVSPLYPWRYSPAVT 61
Query: 60 RMARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIG 119
+A DFY +L L TG++ L D+ ALA R + P
Sbjct: 62 ALAHWSQDFYPQLGERLFASTGVDPEVHTTGLYWLDLDDEAE----ALAWAAREQRP--- 114
Query: 120 DLQILNKSEANTHFPELD-GYEQLLYASGGARVEGADLTRILLEA--SGVNVIKDEVHFT 176
L ++ S A P L G++ +Y +G A V L + L A + NV E H
Sbjct: 115 -LSAVDISAAYDAVPVLGPGFKHAIYMAGVANVRNPRLVKSLKAALLALPNVSLRE-HCQ 172
Query: 177 ITDNGF-----RVQGIDF-------DKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYY 224
IT GF RV G+ D++VL++GAW +L ++ V P KGQ+
Sbjct: 173 IT--GFVQEKGRVTGVQTADGVLAADEVVLSAGAWSGDLLRTLGLELPVEPVKGQM--IL 228
Query: 225 FSNINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYF 284
F +V+ +G IP +G + VG++ E+ +D L+ + A+
Sbjct: 229 FKCAEDFLPSMVLAKGRY-AIPRRDGHILVGSTLEH-AGYDKTPTADALESLKASAVELL 286
Query: 285 PQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGP 334
P+L+ A + G+R + + P+ GPVP EG + G GL + P
Sbjct: 287 PELEGATVVAHWAGLRPGSPEGIPYIGPVPGHEGLWLNCGHYRNGLVLAP 336
>gi|30018906|ref|NP_830537.1| Glycine oxidase [Bacillus cereus ATCC
14579]
gi|29894448|gb|AAP07738.1| Glycine oxidase [Bacillus cereus ATCC
14579]
Length = 369
Score = 77.4 bits (189), Expect = 3e-13
Identities = 87/370 (23%), Positives = 166/370 (44%), Gaps = 38/370 (10%)
Query: 4 IAIIGAGAVGATLAYYLSKEKDIQVTVFDYG--VGQATKAAAGIISPWFSKRRNKAWYRM 61
+AIIG G +G+++A++L+ E+ +V + + +A+KAAAG++ + +
Sbjct: 7 VAIIGGGVIGSSVAHFLA-ERGHKVAIVEKQSIASEASKAAAGLLGVQAEWDAYNPLFEL 65
Query: 62 ARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLE---------------SLFA 106
AR + +L L++ Y++ G++ + ++E + E S F
Sbjct: 66 ARESRAIFPQLAAVLREKTGVDIGYEEKGIYRIAQNEDEKERILHIMDWQQKTGEDSYFL 125
Query: 107 LADKRRLESPLIGDLQILNKSEANTHFPELDGY---EQLLYA-SGGARVEGADLTRILLE 162
D R + P + + I ++P+ DG+ +L A + A + GAD+ E
Sbjct: 126 TGDHVREKEPYLSESII-----GAVYYPK-DGHVIAPELTKAFAHSAAISGADIYE-QTE 178
Query: 163 ASGVNVIKDEVHFTITDNGFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRD 222
+ + ++V IT G + +K+V+A G+W K+L + P KG++
Sbjct: 179 VFDIRIENNKVTGVITSEGI----VTCEKVVIAGGSWSTKLLSYFHRDWGTYPVKGEVVA 234
Query: 223 YYFSNINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIG 282
S K P+ + I P G+ +GA+ + F+ + + + E+A
Sbjct: 235 VR-SRKQLLKAPIF--QERFYITPKRGGRYVIGATMK-PHTFNKTVQPESITSILERAYT 290
Query: 283 YFPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQ 342
P LK+A+ S G+R ++ +P+ G ++G YA +G G+ + P+ G +
Sbjct: 291 ILPALKEAEWESTWAGLRPQSNHEAPYMGEHEEIKGLYACTGHYRNGILLSPISGQYMAD 350
Query: 343 LILNK-ENQL 351
LI K EN L
Sbjct: 351 LIEGKQENHL 360
>gi|21398693|ref|NP_654678.1| DAO, FAD dependent oxidoreductase
[Bacillus anthracis A2012]
gi|30260878|ref|NP_843255.1| glycine oxidase [Bacillus anthracis
str. Ames]
gi|30254327|gb|AAP24741.1| glycine oxidase [Bacillus anthracis str.
Ames]
Length = 369
Score = 76.6 bits (187), Expect = 7e-13
Identities = 88/371 (23%), Positives = 167/371 (44%), Gaps = 40/371 (10%)
Query: 4 IAIIGAGAVGATLAYYLSKEKDIQVTVFDYG--VGQATKAAAGIISPWFSKRRNKAWYRM 61
+AIIG G +G+++A++L+ E+ +V + + +A+KAAAG++ + +
Sbjct: 7 VAIIGGGVIGSSVAHFLA-ERGHKVAIVEKQQIASEASKAAAGLLGVQAEWDEYDPLFDL 65
Query: 62 ARLGADFYSKLVTDL-QKDGFETKFYQQTGVFLLKKDESQLE---------------SLF 105
AR + +L L +K G + Y++ G++ + ++E + E S F
Sbjct: 66 ARESRAIFPQLAEVLREKTGIDIG-YEEKGIYRIAQNEDEKERILHIMDWQQKTGEDSYF 124
Query: 106 ALADKRRLESPLIGDLQILNKSEANTHFPELDGY----EQLLYASGGARVEGADLTRILL 161
D+ R + P + + I ++P+ DG+ E + A + GAD+
Sbjct: 125 LTGDRLREQEPYLSESII-----GAVYYPK-DGHVIAPELTKAFAHSAAISGADIYE-QT 177
Query: 162 EASGVNVIKDEVHFTITDNGFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLR 221
E + + +V +T G I +K+V+A G+W K+L + + P KG++
Sbjct: 178 EVFDIRIENKKVIGIVTSEGM----ISCEKVVIAGGSWSTKLLGYFHREWGTYPVKGEVV 233
Query: 222 DYYFSNINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAI 281
S K P+ + I P G+ +GA+ + F+ + + + E+A
Sbjct: 234 AVK-SRKQLLKAPIF--QERFYIAPKRGGRYVIGATMK-PHTFNKTVQPESITSILERAY 289
Query: 282 GYFPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELC 341
P LK+A+ S G+R ++ +P+ G ++G YA +G G+ + P+ G +
Sbjct: 290 TILPALKEAEWESTWAGLRPQSNHEAPYMGEHEEIKGLYACTGHYRNGILLSPVSGQYMA 349
Query: 342 QLILNK-ENQL 351
LI K EN L
Sbjct: 350 DLIEGKQENHL 360
>gi|17228849|ref|NP_485397.1| hypothetical protein [Nostoc sp. PCC
7120]
gi|25533672|pir||AG1975 hypothetical protein all1354 [imported] -
Nostoc sp. (strain PCC 7120)
gi|17130701|dbj|BAB73311.1| ORF_ID:all1354~hypothetical protein
[Nostoc sp. PCC 7120]
Length = 360
Score = 73.9 bits (180), Expect = 4e-12
Identities = 88/354 (24%), Positives = 159/354 (44%), Gaps = 31/354 (8%)
Query: 4 IAIIGAGAVGATLAYYLSKEKDIQVTVFDYG--VGQATKAAAGIISPWFSKR-RNKAWYR 60
+AIIG G VGA +AY LS+ I++TVFD +T AA G++ S++ + KAW +
Sbjct: 3 VAIIGCGVVGAAIAYELSQVPGIKITVFDKQPPAQASTGAALGVLVCIISQKIKGKAW-Q 61
Query: 61 MARLGADFYSKLVTDLQK-DGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIG 119
M + Y L+ +L+ G + F +Q G+ L + +LES LA R +
Sbjct: 62 MRQTSIQRYETLIPELEAITGRKIPFNRQ-GILSLCLEAEKLESWENLAAIRHTQG---W 117
Query: 120 DLQILNKSEANTHFPELDGYEQLL---YASGGARVEGADLTRILLEASGVNVIKDEVHFT 176
L+I + + P++D + Q++ Y+ +++ LT L+EA+ + F
Sbjct: 118 KLEIWDTKKLKHICPQVD-HRQIIGAVYSPQDRQLDPTALTLALVEAAQHKGVT--FKFG 174
Query: 177 ITDNGF------------RVQG-IDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDY 223
+T GF +G I D +++++G I + N VD+RP GQ
Sbjct: 175 VTVLGFPTIEATQCTSIETTEGKITADWIIISAGLGSTAITTQLNQPVDIRPVLGQALQV 234
Query: 224 YFSN-INTGKYPVVMPEGELDIIPFDNGKVSVGASHENDM-AFDLNIDFKVLDKFEEQAI 281
+ + + + ++ I+P G +GA+ E ++ + ++L+ +QAI
Sbjct: 235 RLDHPLGNPDFQPAITGNDVHIVPVGGGDYWIGATVEFPTDNHEIPPNQELLESVRQQAI 294
Query: 282 GYFPQLKKADTTSERVGIRAYTSDF-SPFFGPVPCMEGAYAASGLGSTGLTVGP 334
+ P+L A+ G+R +P +P A+G G+ + P
Sbjct: 295 AFCPELATAEIIRTWSGLRPRPEGRPAPVIDQLPGFSNVLLATGHYRNGVLLAP 348
>gi|15597391|ref|NP_250885.1| hydrogen cyanide synthase HcnC
[Pseudomonas aeruginosa PA01]
gi|11348705|pir||H83370 hydrogen cyanide synthase HcnC PA2195
[imported] - Pseudomonas aeruginosa (strain PAO1)
gi|6644364|gb|AAF21030.1|AF208523_3 hydrogen cyanide synthase HcnC
[Pseudomonas aeruginosa]
gi|9948217|gb|AAG05583.1|AE004646_4 hydrogen cyanide synthase HcnC
[Pseudomonas aeruginosa PAO1]
Length = 417
Score = 70.9 bits (172), Expect = 4e-11
Identities = 89/401 (22%), Positives = 170/401 (42%), Gaps = 79/401 (19%)
Query: 4 IAIIGAGAVGATLAYYLSKEKDIQVTVFD---------------YGVGQATKAAAGIISP 48
I I G G +GA+ AY LS+ ++++ V D + +G++ G+I
Sbjct: 7 IVIAGGGVIGASCAYQLSRRGNLRIAVVDDKRPGNATRASAGGLWAIGESVGLGCGVIFF 66
Query: 49 WFSKRRNK--------------------AWYRMARLGADFYSKLVTDL-QKDGFETKFYQ 87
RN+ A++ +A Y +L +L ++ G + KF +
Sbjct: 67 RMMSSRNRREAQGAAVAVDASTPHILPPAFFDLALQSNALYPELHRELIERHGMDFKF-E 125
Query: 88 QTGV-FLLKKDESQLESLFALADKRRLESPLIGDLQILNKSEANTHFPELDGYEQLLYAS 146
+TG+ ++++ DE + + +A L ++ L++ E P + +A+
Sbjct: 126 RTGLKYVIQDDEDRQYAEHIVAQIPHLAE----QVRWLDREELRRAEPAVS------HAA 175
Query: 147 GGA-------RVEGADLTRILLEAS---GVNVIKDEVHFTITDNGFRVQGIDFDK----- 191
GA +V L LEA+ GV ++ + G R+ G+ D
Sbjct: 176 HGALEFLCDHQVSPFRLADAYLEAARQNGVELLPGTNVTGVLRQGRRISGVRTDNAGVLH 235
Query: 192 ---LVLASGAWLAKILD-EHNYQVDVRPQKGQLRDYYFSNINTGKYPVV----MPEGELD 243
L+ A+GAW A++ + ++ V+P KGQ+ + T + P + + +
Sbjct: 236 CRTLINAAGAWAAELSEMATGRRIPVKPVKGQI-------VLTERMPRLLNGCLTTSDCY 288
Query: 244 IIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAYT 303
+ DNG++ +G++ E D FD++ F + + A+ P+L++ + G+R +
Sbjct: 289 MAQKDNGEILIGSTTE-DKGFDVSNTFPEIAGLVQGAVRCVPELQQVNLKRTWAGLRPGS 347
Query: 304 SDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLI 344
D P GPV +EG A G TG+ + G L +L+
Sbjct: 348 PDELPILGPVAEVEGYLNACGHFRTGILTSAITGVLLDRLV 388
>gi|3220203|gb|AAC38596.1| hydrogen cyanide synthase HcnC
[Pseudomonas fluorescens]
Length = 417
Score = 70.9 bits (172), Expect = 4e-11
Identities = 103/424 (24%), Positives = 175/424 (40%), Gaps = 90/424 (21%)
Query: 4 IAIIGAGAVGATLAYYLSKEKDIQVTVFDYG-VGQATKAAAG---------------IIS 47
+ I G G +GA+ AY LSK KD++V + D G A++A+AG I
Sbjct: 7 VVIAGGGVIGASCAYQLSKRKDLKVALIDAKRPGNASRASAGGLWAIGESVGLGCGVIFF 66
Query: 48 PWFSKRRNK-------------------AWYRMARLGADFYSKLVTDLQK-DGFETKFYQ 87
S R + +++ A + Y +L +L + KF +
Sbjct: 67 RMMSANRKREAQGSAVVVDSSTPHILPQSFFDFALQSNELYPRLHRELMGLHNMDFKF-E 125
Query: 88 QTGV-FLLKKDESQLES------LFALADKRRLESPLIGDLQILNKSEANTHFPELDGYE 140
QTG+ F++ +E +L + + L+D+ R D L SE N E G
Sbjct: 126 QTGLKFVIYDEEDRLYAEHIVGCIPHLSDQVRWL-----DQAALRASEPNVSH-EAQGAL 179
Query: 141 QLL-------YASGGARVEGADLTRILLEASGVNVIKDEVHFTITDNGFRVQGIDFD--- 190
+ L + A EGA +GV+V + + G RV G+ D
Sbjct: 180 EFLCDHQVNPFRLTDAYTEGA-------RQNGVDVYFNTNVTGVLHQGNRVSGVKTDVAG 232
Query: 191 -----KLVLASGAWLAKI-LDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVV----MPEG 240
L+ A+GAW A++ L ++ V+P KGQ+ + T + P + +
Sbjct: 233 LFRCTTLINAAGAWAAELSLQATGIEIPVKPVKGQI-------LLTERMPKLLNGCLTTS 285
Query: 241 ELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIR 300
+ + DNG++ +G++ E D FD+ + ++ + A+ P+L + G+R
Sbjct: 286 DCYMAQKDNGEILIGSTTE-DKGFDVTTTYPEINGLVQGAVRCVPELAHVNLKRCWAGLR 344
Query: 301 AYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITK 360
+ D P GP+ +EG A G TG+ + G L +L+ E L L DIT
Sbjct: 345 PGSPDELPILGPMDGVEGYLNACGHFRTGILTSAITGVLLDKLV--NEEALPL---DITP 399
Query: 361 YVKK 364
++ +
Sbjct: 400 FLAR 403
>gi|32042295|ref|ZP_00139878.1| hypothetical protein [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 592
Score = 70.1 bits (170), Expect = 6e-11
Identities = 89/401 (22%), Positives = 171/401 (42%), Gaps = 79/401 (19%)
Query: 4 IAIIGAGAVGATLAYYLSKEKDIQVTVFD---------------YGVGQATKAAAGIISP 48
I I G G +GA+ AY LS+ ++++ V D + +G++ G+I
Sbjct: 182 IVIAGGGVIGASCAYQLSRRGNLRIAVVDDKRPGNATRASAGGLWAIGESVGLGCGVIFF 241
Query: 49 WFSKRRNK--------------------AWYRMARLGADFYSKLVTDL-QKDGFETKFYQ 87
RN+ A++ +A Y +L +L ++ G + KF +
Sbjct: 242 RMMSSRNRREAQGAAVAVDASTPHILPPAFFDLALQSNALYPELHRELIERHGMDFKF-E 300
Query: 88 QTGV-FLLKKDESQLESLFALADKRRLESPLIGDLQILNKSEANTHFPELDGYEQLLYAS 146
+TG+ ++++ DE + + +A L ++ L++ E P + +A+
Sbjct: 301 RTGLKYVIQDDEDRQYAEHIVAQIPHLAE----QVRWLDREELRRAEPAVS------HAA 350
Query: 147 GGA-------RVEGADLTRILLEASGVNVIKDEVHFTITD---NGFRVQGIDFDK----- 191
GA +V L LEA+ N ++ + +T G R+ G+ D
Sbjct: 351 HGALEFLCDHQVSPFRLADAYLEAARQNGVELLLGTNVTGVLRQGRRISGVRTDNAGVLH 410
Query: 192 ---LVLASGAWLAKILD-EHNYQVDVRPQKGQLRDYYFSNINTGKYPVV----MPEGELD 243
L+ A+GAW A++ + ++ V+P KGQ+ + T + P + + +
Sbjct: 411 CRTLINAAGAWAAELSELATGRRIPVKPVKGQI-------VLTERMPRLLNGCLTTSDCY 463
Query: 244 IIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAYT 303
+ DNG++ +G++ E D FD++ F + + A+ P+L++ + G+R +
Sbjct: 464 MAQKDNGEILIGSTTE-DKGFDVSNTFPEIAGLVQGAVRCVPELQQVNLKRTWAGLRPGS 522
Query: 304 SDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLI 344
D P GPV +EG A G TG+ + G L +L+
Sbjct: 523 PDELPILGPVAEVEGYLNACGHFRTGILTSAVTGVLLDRLV 563
>gi|32042293|ref|ZP_00139876.1| hypothetical protein [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 639
Score = 70.1 bits (170), Expect = 6e-11
Identities = 89/401 (22%), Positives = 171/401 (42%), Gaps = 79/401 (19%)
Query: 4 IAIIGAGAVGATLAYYLSKEKDIQVTVFD---------------YGVGQATKAAAGIISP 48
I I G G +GA+ AY LS+ ++++ V D + +G++ G+I
Sbjct: 229 IVIAGGGVIGASCAYQLSRRGNLRIAVVDDKRPGNATRASAGGLWAIGESVGLGCGVIFF 288
Query: 49 WFSKRRNK--------------------AWYRMARLGADFYSKLVTDL-QKDGFETKFYQ 87
RN+ A++ +A Y +L +L ++ G + KF +
Sbjct: 289 RMMSSRNRREAQGAAVAVDASTPHILPPAFFDLALQSNALYPELHRELIERHGMDFKF-E 347
Query: 88 QTGV-FLLKKDESQLESLFALADKRRLESPLIGDLQILNKSEANTHFPELDGYEQLLYAS 146
+TG+ ++++ DE + + +A L ++ L++ E P + +A+
Sbjct: 348 RTGLKYVIQDDEDRQYAEHIVAQIPHLAE----QVRWLDREELRRAEPAVS------HAA 397
Query: 147 GGA-------RVEGADLTRILLEASGVNVIKDEVHFTITD---NGFRVQGIDFDK----- 191
GA +V L LEA+ N ++ + +T G R+ G+ D
Sbjct: 398 HGALEFLCDHQVSPFRLADAYLEAARQNGVELLLGTNVTGVLRQGRRISGVRTDNAGVLH 457
Query: 192 ---LVLASGAWLAKILD-EHNYQVDVRPQKGQLRDYYFSNINTGKYPVV----MPEGELD 243
L+ A+GAW A++ + ++ V+P KGQ+ + T + P + + +
Sbjct: 458 CRTLINAAGAWAAELSELATGRRIPVKPVKGQI-------VLTERMPRLLNGCLTTSDCY 510
Query: 244 IIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAYT 303
+ DNG++ +G++ E D FD++ F + + A+ P+L++ + G+R +
Sbjct: 511 MAQKDNGEILIGSTTE-DKGFDVSNTFPEIAGLVQGAVRCVPELQQVNLKRTWAGLRPGS 569
Query: 304 SDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLI 344
D P GPV +EG A G TG+ + G L +L+
Sbjct: 570 PDELPILGPVAEVEGYLNACGHFRTGILTSAVTGVLLDRLV 610
>gi|23130265|ref|ZP_00112082.1| hypothetical protein [Nostoc
punctiforme]
Length = 369
Score = 68.9 bits (167), Expect = 1e-10
Identities = 88/367 (23%), Positives = 161/367 (42%), Gaps = 31/367 (8%)
Query: 4 IAIIGAGAVGATLAYYLSKEKDIQVTVFDYG--VGQATKAAAGIISPWFSKR-RNKAWYR 60
+ IIG G VGA +AY LS K +++TV D +T AA G++ S++ + KAW +
Sbjct: 3 VVIIGCGVVGAAIAYELSLVKGLKITVCDRQPPAQASTGAALGVLMGVISQKIKGKAW-Q 61
Query: 61 MARLGADFYSKLVTDLQK-DGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIG 119
M + Y L+ +L+ G + F +Q G+ L +E L + L + R +
Sbjct: 62 MRQTSIQRYETLIPELEALTGRKIPFNRQ-GILSLGLEEENLAAWEKLVEIRHSQG---W 117
Query: 120 DLQILNKSEANTHFPELDGYEQL---LYASGGARVEGADLTRILLEASGVNVIKDEVHFT 176
L+I + + P+++ E++ +Y+ +++ LT L+EA+ N + + T
Sbjct: 118 HLEIWDTVKLQNICPQVN-CEKITGAVYSPQDRQLDPTALTLALVEAAQQNGVTFKFGVT 176
Query: 177 ITD-------------NGFRVQ--GIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQ-L 220
+ D N I D V+A+G + + N +D+RP GQ L
Sbjct: 177 VLDAQTLPPDSSPQFCNKLETTEGKIVADWFVVAAGLGSTPLTAKLNQIIDIRPVLGQAL 236
Query: 221 RDYYFSNINTGKYPVVMPEGELDIIPFDNGKVSVGASHE-NDMAFDLNIDFKVLDKFEEQ 279
+ + + + ++ I+P G VGA+ E ++ + ++L+ EQ
Sbjct: 237 QMRVGHPLGNPDFQPAITGNDVHIVPVGAGDYWVGATVEFPSNGNEIPPNQELLESVREQ 296
Query: 280 AIGYFPQLKKADTTSERVGIRAYTSDF-SPFFGPVPCMEGAYAASGLGSTGLTVGPLIGY 338
AI + P+L A G+R +P G +P A+G G+ + P Y
Sbjct: 297 AIAFCPELATATIIRTWSGLRPRPEGRPAPVIGKLPGFSNILLATGHYRNGVLLAPATAY 356
Query: 339 ELCQLIL 345
+ ++I+
Sbjct: 357 AIREMIV 363
>gi|15599744|ref|NP_253238.1| probable D-amino acid oxidase
[Pseudomonas aeruginosa PA01]
gi|12644219|sp|P33642|Y9E8_PSEAE Probable D-amino acid oxidase
PA4548
gi|11351225|pir||B83078 probable D-amino acid oxidase PA4548
[imported] - Pseudomonas aeruginosa (strain PAO1)
gi|9950792|gb|AAG07936.1|AE004868_7 probable D-amino acid oxidase
[Pseudomonas aeruginosa PAO1]
Length = 364
Score = 68.6 bits (166), Expect = 2e-10
Identities = 98/365 (26%), Positives = 164/365 (44%), Gaps = 35/365 (9%)
Query: 2 KKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVG--QATKAAAGIISPWFSKRRNKAWY 59
+++ ++GAG +G A L+ ++VT+ + G +A+ A GI+SP + R + A
Sbjct: 3 ERVVVVGAGVIGLLTARELAL-AGLRVTLVERGESGREASWAGGGIVSPLYPWRYSPAVT 61
Query: 60 RMARLGADFYSKLVTD-LQKDGFETKFYQQTGVFLLKKDESQLESL-FALADKRRL-ESP 116
+A DFY L L + G + + + G++ L D+ Q E+L +A R L E P
Sbjct: 62 ALAHWSQDFYPALGQRLLDETGLDPEVH-TVGLYWLDLDD-QTEALQWARKHTRPLKEVP 119
Query: 117 LIGDLQILNKSEANTHFPELD-GYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHF 175
+ EA P L G+++ +Y SG A V L R L AS E+H
Sbjct: 120 I---------EEAYAAVPGLGAGFQRAVYMSGVANVRNPRLARS-LRASLQQFANLELHE 169
Query: 176 TITDNGF-----RVQG-------IDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDY 223
G+ RV G I DK++LA+GAW ++L ++ V P KGQ+ Y
Sbjct: 170 QTEVRGWLRDGDRVVGVATSRGEIRGDKVLLAAGAWSGELLKPLGLELPVVPVKGQMILY 229
Query: 224 YFSNINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGY 283
+ + +V+ +G IP +G + +G++ E+ FD + + A
Sbjct: 230 KCAADFLPR--MVLAKGRY-AIPRRDGHILIGSTLEHS-GFDKTPTDEAQESLRASAAEL 285
Query: 284 FPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQL 343
P+L + G+R + + P+ GPVP +G + +G GL + P L L
Sbjct: 286 LPELADMQPVAHWAGLRPGSPEGIPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADL 345
Query: 344 ILNKE 348
+ +E
Sbjct: 346 MSGRE 350
>gi|32042297|ref|ZP_00139880.1| hypothetical protein [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 410
Score = 68.6 bits (166), Expect = 2e-10
Identities = 88/399 (22%), Positives = 170/399 (42%), Gaps = 79/399 (19%)
Query: 6 IIGAGAVGATLAYYLSKEKDIQVTVFD---------------YGVGQATKAAAGIISPWF 50
I G G +GA+ AY LS+ ++++ V D + +G++ G+I
Sbjct: 2 IAGGGVIGASCAYQLSRRGNLRIAVVDDKRPGNATRASAGGLWAIGESVGLGCGVIFFRM 61
Query: 51 SKRRNK--------------------AWYRMARLGADFYSKLVTDL-QKDGFETKFYQQT 89
RN+ A++ +A Y +L +L ++ G + KF ++T
Sbjct: 62 MSSRNRREAQGAAVAVDASTPHILPPAFFDLALQSNALYPELHRELIERHGMDFKF-ERT 120
Query: 90 GV-FLLKKDESQLESLFALADKRRLESPLIGDLQILNKSEANTHFPELDGYEQLLYASGG 148
G+ ++++ DE + + +A L ++ L++ E P + +A+ G
Sbjct: 121 GLKYVIQDDEDRQYAEHIVAQIPHLAE----QVRWLDREELRRAEPAVS------HAAHG 170
Query: 149 A-------RVEGADLTRILLEASGVNVIKDEVHFTITD---NGFRVQGIDFDK------- 191
A +V L LEA+ N ++ + +T G R+ G+ D
Sbjct: 171 ALEFLCDHQVSPFRLADAYLEAARQNGVELLLGTNVTGVLRQGRRISGVRTDNAGVLHCR 230
Query: 192 -LVLASGAWLAKILD-EHNYQVDVRPQKGQLRDYYFSNINTGKYPVV----MPEGELDII 245
L+ A+GAW A++ + ++ V+P KGQ+ + T + P + + + +
Sbjct: 231 TLINAAGAWAAELSELATGRRIPVKPVKGQI-------VLTERMPRLLNGCLTTSDCYMA 283
Query: 246 PFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAYTSD 305
DNG++ +G++ E D FD++ F + + A+ P+L++ + G+R + D
Sbjct: 284 QKDNGEILIGSTTE-DKGFDVSNTFPEIAGLVQGAVRCVPELQQVNLKRTWAGLRPGSPD 342
Query: 306 FSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLI 344
P GPV +EG A G TG+ + G L +L+
Sbjct: 343 ELPILGPVAEVEGYLNACGHFRTGILTSAVTGVLLDRLV 381
>gi|1161219|gb|AAB39269.1| homolgous to D-amino acid dehydrogenase
enzyme
Length = 364
Score = 68.2 bits (165), Expect = 2e-10
Identities = 98/365 (26%), Positives = 163/365 (43%), Gaps = 35/365 (9%)
Query: 2 KKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVG--QATKAAAGIISPWFSKRRNKAWY 59
+++ ++GAG +G A L+ ++VT+ + G +A+ A GI+SP + R N A
Sbjct: 3 ERVVVVGAGVIGLLTARKLAI-AGLRVTLVERGESGREASWAGGGIVSPLYPWRYNPAVT 61
Query: 60 RMARLGADFYSKLVTD-LQKDGFETKFYQQTGVFLLKKDESQLESL-FALADKRRL-ESP 116
+A DFY L L + G + + + G++ L D+ Q E+L +A R L E P
Sbjct: 62 ALAHWSQDFYPALGQRLLDETGLDPEVH-TVGLYWLDLDD-QTEALQWAPKHTRPLKEVP 119
Query: 117 LIGDLQILNKSEANTHFPELD-GYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHF 175
+ EA P L G+++ +Y SG A V L R L AS E+H
Sbjct: 120 I---------EEAYAAVPGLGAGFQRAVYMSGVANVRNPRLARS-LRASLQQFANLELHE 169
Query: 176 TITDNGF-----RVQG-------IDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDY 223
G+ RV G I DK++LA+GAW ++L ++ V P KGQ+ Y
Sbjct: 170 QTEVRGWLRDGDRVVGVATSRGEIRGDKVLLAAGAWSGELLKPLGLELPVVPVKGQMILY 229
Query: 224 YFSNINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGY 283
+ + +V+ +G IP +G + +G++ E+ FD + +
Sbjct: 230 KCAADFLPR--MVLAKGRY-AIPRRDGHILIGSTLEHS-GFDKTPTDEAQESLRVSVAEL 285
Query: 284 FPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQL 343
P+L + G+R + + P+ GPVP +G + +G GL + P L L
Sbjct: 286 LPELADMQPVAHWAGLRPGSPEGIPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADL 345
Query: 344 ILNKE 348
+ +E
Sbjct: 346 MSGRE 350
>gi|23061428|ref|ZP_00086273.1| hypothetical protein [Pseudomonas
fluorescens PfO-1]
Length = 447
Score = 67.4 bits (163), Expect = 4e-10
Identities = 93/410 (22%), Positives = 173/410 (41%), Gaps = 73/410 (17%)
Query: 4 IAIIGAGAVGATLAYYLSKEKDIQVTVFDYG-VGQATKAAAG---------------IIS 47
+ I G G +GA++AY LSK K ++V + D G AT+A+AG I
Sbjct: 35 VVIAGGGVIGASIAYQLSKRKGLKVALIDAKRPGNATRASAGGLWAIGESVGLGCGVIFF 94
Query: 48 PWFSKRRNK-------------------AWYRMARLGADFYSKLVTDLQKD-GFETKFYQ 87
S R + +++ A Y L +L+ + G + KF +
Sbjct: 95 RMMSASRKRETQGAAVAVDASTPHILPPSFFDFALQSNALYPALHRELRDNHGMDFKF-E 153
Query: 88 QTGV-FLLKKDESQLES------LFALADKRR-LESPLIGDLQILNKSEANTHFPELDGY 139
+TG+ F++ DE +L + + LAD+ R L+ + + + EA L +
Sbjct: 154 KTGLKFVIYDDEDRLYAEHIVGCIPHLADQVRWLDQAALRESEPSVSHEARGALEFLCDH 213
Query: 140 EQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDNGFRVQGIDFDK-------- 191
+ + A EGA +GV++ + + +G RV G+ +
Sbjct: 214 QVSPFRLADAYTEGA-------RQNGVDMYVNTNITGVLHHGTRVTGVQTAEAGVFHCKT 266
Query: 192 LVLASGAWLAKILD-EHNYQVDVRPQKGQLRDYYFSNINTGKYPVV----MPEGELDIIP 246
L+ A+GAW A + + ++ V+P KGQ+ + T + P + + + +
Sbjct: 267 LINAAGAWAADLSEWATGIRIPVKPVKGQI-------LLTERLPKILNGCLTTSDCYMAQ 319
Query: 247 FDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAYTSDF 306
DNG++ +G++ E D FD+ + + + A+ P+L + G+R + D
Sbjct: 320 KDNGEILIGSTTE-DKGFDVTTTWPEIAGLVQGAVRCLPELADINLKRTWAGLRPGSPDE 378
Query: 307 SPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDY 356
P GP+ +EG A G TG+ + G L +L+ ++ L++ +
Sbjct: 379 LPILGPMAGVEGYLNACGHFRTGVLTSAITGVLLDKLVNDEPLSLDITPF 428
>gi|22299596|ref|NP_682843.1| ORF_ID:tll2053~hypothetical protein
[Thermosynechococcus elongatus BP-1]
gi|22295780|dbj|BAC09605.1| ORF_ID:tll2053~hypothetical protein
[Thermosynechococcus elongatus BP-1]
Length = 372
Score = 63.5 bits (153), Expect = 5e-09
Identities = 88/366 (24%), Positives = 160/366 (43%), Gaps = 44/366 (12%)
Query: 4 IAIIGAGAVGATLAYYLSKEKDIQVTVF---------DYGVGQATKAAAGIISPWFSKRR 54
+ I+GAG VG+ +AY LS+ D T D+ QAT AA G++ S+RR
Sbjct: 10 VTIVGAGVVGSAIAYELSRVLDAAATPILVLEAQREEDW---QATGAALGVLIVHLSRRR 66
Query: 55 NKAWYRMARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLE 114
+++ + Y L+ +L+ YQ+ G+ + E+ + A L+
Sbjct: 67 RGRNFQLRQASLARYETLIPELEAQTGIKIPYQRQGIVEICTTEAAAIAAQAW-----LQ 121
Query: 115 SPLIGDLQILNKSEANTHFP--ELDGYEQLLYASGGARVEGADLTRILLEAS---GVNVI 169
++ L+ +E H P EL L+A+G +V LT+ L +A+ GV
Sbjct: 122 EQTPSGVRWLSPAEVQDHCPLLELHHIHGALWATGDRQVTPKPLTQALRQAARQRGVQFF 181
Query: 170 -KDEVHFTITDNGFRVQ----GIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYY 224
+ V G+ ++ ++ + L+LA+G + + + V + P GQ +
Sbjct: 182 YQTPVRQLQRSRGWILELDQTSLETEYLILAAGLGTTPLTEALDRPVTLEPVLGQALE-- 239
Query: 225 FSNINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNI-DFKVLDKFEEQAIGY 283
F+ G PV+ +G + +P G+V VGA+ E F+ I + + LD+ +A
Sbjct: 240 FACQVDGNTPVMTADG-IHFVPLPWGRVWVGATVE----FNALIGNPQTLDQLRRRASEL 294
Query: 284 FPQLKKADTTSERVGIRAYTSDFSPFFGPVPCME----GAYAASGLGSTGLTVGPLIGYE 339
+ L+ A T + G+R SD P P +E + A+G G+ + P+ +
Sbjct: 295 WRVLETAPLTQQWQGVRPRPSD-----RPAPIIERMDDHTWLATGHYRNGILLAPVTAQK 349
Query: 340 LCQLIL 345
+ ++
Sbjct: 350 IAASVI 355
>gi|22299911|ref|NP_683158.1| ORF_ID:tlr2368~probable D-amino acid
oxidase [Thermosynechococcus elongatus BP-1]
gi|22296096|dbj|BAC09920.1| ORF_ID:tlr2368~probable D-amino acid
oxidase [Thermosynechococcus elongatus BP-1]
Length = 371
Score = 62.8 bits (151), Expect = 1e-08
Identities = 88/380 (23%), Positives = 154/380 (40%), Gaps = 47/380 (12%)
Query: 2 KKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQAT-KAAAGIISPWFSKRRNKAWYR 60
+ I IIG G +G +A L+ + + TV +A AAAG+++P A +
Sbjct: 11 RDILIIGGGTMGLAIAIELAL-RGARPTVLSRQFREAALHAAAGMLAPQAEGLPAGAMWN 69
Query: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD 120
+ + Y + L++ Y G+ DE Q R P+ D
Sbjct: 70 LCTASRNLYPSWIEKLEQLTGLDAGYWPCGILAPVTDERQ----------RDRTHPMEAD 119
Query: 121 LQILNKSEANTHFPELDGYEQLLYASGGARVEGA----DLTRILLEAS---GVNVIKDEV 173
+ L+ SE + P G+ + + + EG +L ++L+ A+ G+ VI+
Sbjct: 120 SRWLDTSELANYQP---GFAESVLGAWWFPQEGQVNTRNLAKVLVSAARLLGIEVIEGIT 176
Query: 174 --HFTITDNGFRVQGIDFDK-------LVLASGAWLAKILDEHNYQVDVRPQKGQLRDYY 224
F T G + ++ D+ +LA+GAW +L + V P+KGQ+
Sbjct: 177 VQRFQQTPQG-EITALESDRGRWSAGIYILATGAWSQSLL-----PLPVTPRKGQML--- 227
Query: 225 FSNINTGKYPV---VMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAI 281
+ P+ V+ +L ++P +GKV VGA+ E D+ F L +A
Sbjct: 228 --ALKPPGQPLLNHVIFGDQLYLVPRRSGKVVVGATSE-DVGFQEGTTVAGLQALLNRAT 284
Query: 282 GYFPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELC 341
P+L + G R T D P G P Y A+G G+ + P+ +
Sbjct: 285 AVMPELANYEVIDTWWGYRPATPDDLPILGQGPAAN-LYLATGHYRNGILLAPITAKLMA 343
Query: 342 QLILNKENQLNLEDYDITKY 361
LIL++ +L+ + ++
Sbjct: 344 NLILHQTGDRHLKAFSWQRF 363
>gi|15966027|ref|NP_386380.1| PUTATIVE OXIDOREDUCTASE PROTEIN
[Sinorhizobium meliloti]
gi|15075297|emb|CAC46853.1| PUTATIVE OXIDOREDUCTASE PROTEIN
[Sinorhizobium meliloti]
Length = 815
Score = 61.6 bits (148), Expect = 2e-08
Identities = 101/397 (25%), Positives = 158/397 (39%), Gaps = 59/397 (14%)
Query: 3 KIAIIGAGAVGATLAYYLSKEKDIQVTVFDYG--VGQATKAAAGIISPWFSKRRNKAWYR 60
++ IIG G G ++AY+L+K V + + T AAG+I R ++ R
Sbjct: 10 RVVIIGGGVSGCSVAYHLAKLGWTDVVLLERKQLTCGTTWHAAGLIG---QLRASQNMTR 66
Query: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALA--------DKRR 112
+A+ AD Y KL + G T +Q G + E + E ++ A D R
Sbjct: 67 LAKYSADLYVKLEAE---TGIATGM-RQNGSITVALTEERKEEIYRQASLARAFNVDVRE 122
Query: 113 LESPLIGDLQI-LNKSE--ANTHFP---ELDGYEQLLYASGGAR------VEGADLTRIL 160
+ + +L LN S+ A H P + D + + GAR VEG +T +L
Sbjct: 123 VTPDEVKELYPHLNVSDVKAAVHLPLDGQCDPANIAMALAKGARQNGATIVEGVKVTSVL 182
Query: 161 LE---ASGVNVIKDEVHFTI-TDNGFRVQGIDFDKLVLASGAWLAKILDEHNYQV-DVRP 215
+ +GV ++ FTI T+N G+ +L SG + EH Y V + P
Sbjct: 183 KKDGRITGVTCEQNGESFTIETENVVNCAGMWGRELARQSGVTVPLHACEHFYIVTEAIP 242
Query: 216 QKGQLRDYYFSNINTGKYPVVMPEGELDIIPFDNGKVSVGASH-----------ENDMAF 264
+L PV+ E D GK+ +GA D F
Sbjct: 243 GLSRL-------------PVLRVPDECTYYKEDAGKMLIGAFELKAKPWGMEGIREDFCF 289
Query: 265 D-LNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAAS 323
D L DF E A+ P L+ A + G ++T D + G P ++G + A+
Sbjct: 290 DQLPEDFDHFAPILEMAVNRMPMLETAGIHTFFNGPESFTPDDRYYLGEAPELKGYWVAA 349
Query: 324 GLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITK 360
G S G+ G L Q + + E +L + DI +
Sbjct: 350 GYNSIGIVSSGGAGMALAQWMNDGEPPFDLWEVDIRR 386
>gi|23041848|ref|ZP_00073275.1| hypothetical protein [Trichodesmium
erythraeum IMS101]
Length = 389
Score = 61.2 bits (147), Expect = 2e-08
Identities = 84/348 (24%), Positives = 144/348 (41%), Gaps = 54/348 (15%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQ--ATKAAAGIISPWFSKRRNKAW 58
M I IIG G VGAT+AY LSK + +++TV D + +T AA G++ S++
Sbjct: 1 MSHIVIIGCGVVGATIAYQLSKIEGLKITVLDKQMPAQGSTGAALGVLMGVISQKAKGRP 60
Query: 59 YRMARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLI 118
++M R+ Y L+ +L+ + + + G+ L L+ L + R +
Sbjct: 61 WKMRRMSVQAYHNLIPELEAKINRSISHNRQGILQLCLPGEDLDKWQRLINIREADDL-- 118
Query: 119 GDLQILNKSEANTHFPELDGYEQL--LYASGGARVEGADLTRILLEASGVNVIKDEVHFT 176
L++ + P+L E + +Y+ +V +LT L+EA+ N + HF
Sbjct: 119 -PLEMWDVERLGDRCPQLQISEVIAAIYSPEDLQVNPVELTLALVEAAQQNGVN--FHFG 175
Query: 177 IT----------DNGFRVQGI---------------DFDKLVLAS------------GAW 199
+T N +R + + D D LV+A+ G
Sbjct: 176 VTVAEYKTISLPRNEYRCRQVSIKNLDETKKTPTLPDVDWLVVAAGLGSLPCLQGIKGGK 235
Query: 200 LAKILDEHNYQVDVR----PQKGQLRDYYFSN-INTGKYPVVMPEGELDIIPFDNGKVSV 254
L + + VD R P GQ S + + V+ ++ IIP + V
Sbjct: 236 LRSLQLKRKSNVDNRFTLIPVLGQALHLQVSTLLGKSDFQPVITGDDVHIIPVAENEYWV 295
Query: 255 GASHE--NDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIR 300
GA+ E ND+ ++ D +LD +AI + P L A+ + G+R
Sbjct: 296 GATVEFPNDIG-EVVADSSLLDHVMARAISFCPGLADANILRKWSGLR 342
>gi|32475636|ref|NP_868630.1| probable D-amino acid oxidase
[Pirellula sp.]
gi|32446178|emb|CAD76007.1| probable D-amino acid oxidase
[Pirellula sp.]
Length = 404
Score = 60.1 bits (144), Expect = 6e-08
Identities = 86/383 (22%), Positives = 151/383 (38%), Gaps = 36/383 (9%)
Query: 6 IIGAGAVGATLAYYLSKEKDIQVTVFDYG-VGQATK-AAAGIISPWFSKRRNKAWYRMAR 63
++G GA+G ++A+ L + + +VTV D G + T AAAGI P R R+
Sbjct: 24 VVGGGAIGLSIAWELVRRGE-KVTVIDRGPIAHGTSWAAAGIFPPANFDRATDPIDRLRG 82
Query: 64 LGADFYSKLVTDL-QKDGFETKFYQQTGVFLLKK--DESQLESLFALADKRRLESPLIGD 120
+ L + G + + G +L + + S L + + D +E I
Sbjct: 83 FSHTLWPLWCKQLVDQTGIDPGLIRCGGYYLAETVGEASALTGMMSYWDDLAVECQRIEL 142
Query: 121 LQILNKSEANTHFPELDGYEQ------LLYASGGARVEGADLTRILLEAS---GVNVIKD 171
++L + T + + + + Q + ++ + L L A GV ++
Sbjct: 143 TELLCRQPRLTEWSQTNPWIQSHPDSAAWWTPDEYQIRPSRLLTALATACQSLGVELLP- 201
Query: 172 EVHFTITDNGFRVQG--------------IDFDKLVLASGAWLAKILDEHNYQVDVRPQK 217
H TI D G + D+ +L GA + I E + V P +
Sbjct: 202 --HTTILDVSSDNSGCTAKTLTRDAVEHCLRSDRTILCGGAAIGSICPEIRLESSVIPIR 259
Query: 218 GQLRDYYFSNINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFE 277
GQ+ + +T P+V+ G ++ +G V VG S E ++ F+ V+D
Sbjct: 260 GQI---LLLHSDTFTDPIVLNVGNRYLVARGDGNVLVG-SCEEEVGFEQGTTDDVIDGLR 315
Query: 278 EQAIGYFPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIG 337
A P+L+ A S+ G R T D P G VP + A G +G+ +
Sbjct: 316 SFANRVCPELESATVASQWSGHRPMTFDGFPMIGRVPDQRNVFVAGGHYRSGIHLASGTA 375
Query: 338 YELCQLILNKENQLNLEDYDITK 360
+ +I K + + L D+ + K
Sbjct: 376 VAMADVIEGKRSFMELSDFSVGK 398
>gi|15596464|ref|NP_249958.1| hypothetical protein [Pseudomonas
aeruginosa PA01]
gi|11349151|pir||F83487 hypothetical protein PA1267 [imported] -
Pseudomonas aeruginosa (strain PAO1)
gi|9947200|gb|AAG04656.1|AE004556_6 hypothetical protein
[Pseudomonas aeruginosa PAO1]
Length = 371
Score = 60.1 bits (144), Expect = 6e-08
Identities = 87/361 (24%), Positives = 141/361 (38%), Gaps = 58/361 (16%)
Query: 3 KIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYRMA 62
++ ++GAG VG+ A+ L++ + + V V D G AT G + + N A ++
Sbjct: 4 EVIVVGAGIVGSACAHELAR-RGLDVLVLDSRRGGATAVGMGHL---VAMDDNPAELALS 59
Query: 63 RLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIG-DL 121
+ +L +D Y+ G L D S+L A A+++R G
Sbjct: 60 DYSTQAWRAWAAELPEDC----AYRGCGTLWLAADASEL----AEAERKRQALQAAGVAC 111
Query: 122 QILNKSEANTHFPEL-DGYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDN 180
++L + P L G L SG + + R LL+ +G + +
Sbjct: 112 RMLGAARLYALEPALRPGLAGALEVSGDGILYAPNAARWLLDQAGPRLRRLYA------- 164
Query: 181 GFRVQGIDFDKLVLASGAWL---AKIL------DEHNYQVDVRPQKGQLRDYYFSNINTG 231
V +D +L LA G WL A +L E ++ +RP+KG L + T
Sbjct: 165 --EVSEVDGSRLRLADGRWLSAEALVLANGIHAGELCAELPIRPKKGHL-------LITD 215
Query: 232 KYPVVMPEG--ELDII----------------PFDNGKVSVGASHENDMAFDLNIDFKVL 273
+YP + EL + P G+V +G+S + D D ++ VL
Sbjct: 216 RYPGTLRHQLVELGYVSSAHASSGTSVAFNAQPRPTGQVFLGSSRQFD-TLDPQVEGPVL 274
Query: 274 DKFEEQAIGYFPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVG 333
+ +A+ Y P L + G RA T D P G P G + A G G+T
Sbjct: 275 ARMLRRALDYLPGLAGLNAIRAWTGFRAATPDGLPLLGEHPAQPGLWLAVGHEGLGVTTA 334
Query: 334 P 334
P
Sbjct: 335 P 335
>gi|15595101|ref|NP_212890.1| B. burgdorferi predicted coding region
BB0756 [Borrelia burgdorferi]
gi|7463396|pir||C70194 hypothetical protein BB0756 - Lyme disease
spirochete
gi|2688694|gb|AAC67104.1| B. burgdorferi predicted coding region
BB0756 [Borrelia burgdorferi B31]
Length = 355
Score = 59.7 bits (143), Expect = 7e-08
Identities = 83/377 (22%), Positives = 165/377 (43%), Gaps = 49/377 (12%)
Query: 3 KIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYR-- 60
+ A+IG G G+T+AY L K ++ +V +FD +AT A G+I+P ++ N AW
Sbjct: 4 EFAVIGGGIAGSTVAYELLK-RNKKVILFDNEDTKATMVAGGLINPIMGRKMNIAWKEPH 62
Query: 61 MARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGD 120
+ ++Y ++ + ++KF+ + +F E+Q L +LE+
Sbjct: 63 IFEFAKNYYQEI-----EKTIKSKFFIEKNIFRPFTTENQKNELI-----DKLEN----- 107
Query: 121 LQILNKSEANTHFPELDG--YEQLLYASGGARVEGA---------DLTRILLEA-SGVNV 168
NK+ N DG Y ++GG ++GA ++ + L+E S ++
Sbjct: 108 ----NKNITNFILKIQDGKTYNFSNDSNGGMIIKGARVNTKTYIKNIKKYLIEKNSYISK 163
Query: 169 IKDEVHFTITDNGFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNI 228
+E + ++ F+++ F+KL+ A G + K+ +Y + P KG++ +
Sbjct: 164 NINENKIKLGESFFKIEDFKFEKLIFAKG-YKEKLKGFFSY-LPFEPAKGEIIILECKKL 221
Query: 229 NTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLK 288
N + + + +I K +G ++E + L ++ + L
Sbjct: 222 NFKE----IYNRHISLIHLKGNKFYLGGTYEWNTWNTLTNEWA--KLELLKKFKKITNL- 274
Query: 289 KADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKE 348
K +++ IR T D PF G P + + +G G+ G+++ P L L++N
Sbjct: 275 KCKVIAQKAHIRPSTLDREPFLGEHPKHKNIFILNGFGTRGVSMAPY----LSNLLVNNI 330
Query: 349 NQLNL--EDYDITKYVK 363
+++ Y+I +Y K
Sbjct: 331 EKIDKIPNHYNIKRYAK 347
>gi|16329276|ref|NP_440004.1| unknown protein [Synechocystis sp. PCC
6803]
gi|7470272|pir||S74532 hypothetical protein slr0734 - Synechocystis
sp. (strain PCC 6803)
gi|1651756|dbj|BAA16684.1| ORF_ID:slr0734~unknown protein
[Synechocystis sp. PCC 6803]
Length = 372
Score = 58.9 bits (141), Expect = 1e-07
Identities = 82/364 (22%), Positives = 160/364 (43%), Gaps = 37/364 (10%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYG--VGQATKAAAGIISPWFSKRRNKAW 58
M IA+IGAG VGA +AY LS + + +FD AT AA GI+ S++
Sbjct: 1 MPNIAVIGAGVVGAAIAYELSLMSGLTIDLFDAQEPAQGATGAALGILMAVISQKTKGRG 60
Query: 59 YRMARLGADFYSKLVTDLQKDGFETKFYQQTGV--FLLKKDESQLESLFALADKRRLESP 116
+R+ Y L+ +L+ +T + G+ LL+ D S+ + L A+ +R P
Sbjct: 61 WRLREQSLQRYRTLLPELETATGKTIPGDRQGLVKILLEADWSRWQQLQAV--RRSQGYP 118
Query: 117 LIGDLQILNKSEANTHFPELD-GYEQL---LYASGGARVEGADLTRILLEASGVNVIKDE 172
L++ + E GY + +Y+ +++ LT+ L+EA+ ++
Sbjct: 119 ----LELWTRPEVEQKLSGWPLGYGPIAGAIYSPWDWQIQPQALTQRLIEAAQQRGVRCH 174
Query: 173 VH-----FTITDNGFRVQGID-------FDKLVLASGAWLAKILD---EHNYQVDVRPQK 217
H + D+ Q I D +V+ +G +++ ++N + ++P
Sbjct: 175 FHQAAHPLPVADSINHCQNIQTNQAKFPTDYVVITAGLGSNLLINPNSDNNESLQLQPVI 234
Query: 218 GQLRDYYFSN----INTGKYPVVMPEGELDIIPFDNGKVSVGASHE--NDMAFDLNIDFK 271
GQ ++ + + V+ ++ ++P NG+ +GA+ E +D A + + +
Sbjct: 235 GQAFLLQLADADNPLKNSPWRSVLTTEDIHLVPLANGQFWLGATVEFPSDCA-NGEPNVQ 293
Query: 272 VLDKFEEQAIGYFPQLKKADTTSERVGIRAY-TSDFSPFFGPVPCMEGAYAASGLGSTGL 330
+ + QAI Y+P L++A+ + G R + +P P+ + A+G G+
Sbjct: 294 LRENLWHQAIAYYPFLERAEIINYWSGKRPRPVGESAPVIRPLDGYDNVLLATGHYRNGV 353
Query: 331 TVGP 334
+ P
Sbjct: 354 LLAP 357
>gi|32039836|ref|ZP_00138108.1| hypothetical protein [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 182
Score = 58.5 bits (140), Expect = 2e-07
Identities = 42/159 (26%), Positives = 75/159 (46%), Gaps = 4/159 (2%)
Query: 190 DKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVMPEGELDIIPFDN 249
DK++LA+GAW ++L ++ V P KGQ+ Y + + +V+ +G IP +
Sbjct: 14 DKVLLAAGAWSGELLKPLGLELPVVPVKGQMILYKCAADFLPR--MVLAKGRY-AIPRRD 70
Query: 250 GKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAYTSDFSPF 309
G + +G++ E+ FD + L+ A P+L + G+R + + P+
Sbjct: 71 GHILIGSTLEHS-GFDKTPTDEALESLRASAAELLPELADMQPVAHWAGLRPGSPEGIPY 129
Query: 310 FGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKE 348
GPVP +G + +G GL + P L L+ +E
Sbjct: 130 IGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADLMSGRE 168
>gi|27382301|ref|NP_773830.1| soxB [Bradyrhizobium japonicum]
gi|27355472|dbj|BAC52455.1| soxB [Bradyrhizobium japonicum USDA
110]
Length = 373
Score = 57.8 bits (138), Expect = 3e-07
Identities = 52/174 (29%), Positives = 69/174 (38%), Gaps = 6/174 (3%)
Query: 192 LVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVMPEG-ELDIIPFDNG 250
LV A+GAW KI V V L S + PVV+ G +L F NG
Sbjct: 197 LVNAAGAWAGKIAAALGEPVPVETVAPML--MITSRVPHFIDPVVILRGRKLSFKQFSNG 254
Query: 251 KVSVGASHENDMAFDLN---IDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAYTSDFS 307
V +G H D N +D+K L FP ++ A GI A D
Sbjct: 255 TVLIGGGHLATPYQDRNETVLDWKSLAISARTVFELFPVMRSATIVRAWAGIEAKMKDDI 314
Query: 308 PFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITKY 361
P FGP +G Y G G +GP G + +LI+N Q + D I ++
Sbjct: 315 PVFGPSSRHKGLYHQFGFSLHGFQLGPGAGAVMAELIVNGGTQTRIGDLGIDRF 368
>gi|27468976|ref|NP_765613.1| glycine oxidase [Staphylococcus
epidermidis ATCC 12228]
gi|27316524|gb|AAO05699.1|AE016750_304 glycine oxidase
[Staphylococcus epidermidis ATCC 12228]
Length = 372
Score = 57.8 bits (138), Expect = 3e-07
Identities = 81/382 (21%), Positives = 154/382 (40%), Gaps = 40/382 (10%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEK-DIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWY 59
M + IIG+G +G ++A +LS D+ V D A+ A G++ + +
Sbjct: 1 MHDVLIIGSGVIGMSIARHLSATHLDVAVIDRDVPGKHASYKAGGMLGAQNEFTEDSDLF 60
Query: 60 RMARLGADFYSKLVTD-LQKDGFETKFYQQTGVFLLKKDESQLESL-----FALADKRRL 113
++A + +L L + G + +F + +G+ + + + S+ F + R +
Sbjct: 61 QLAIESRAMFPQLSKSLLDETGIDIQF-KNSGLIKIANEHDDISSIKRQYQFLNSQDRSV 119
Query: 114 ESPLIGDLQILNKSE-----ANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNV 168
+ DL L E A H P DG ++ T LLE+ +
Sbjct: 120 KQLSDDDLLQLTHGEVKPSYAAIHIPH-DG-----------QINAHHYTLALLESMKLRD 167
Query: 169 IK----DEVHFTITDNGF------RVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKG 218
IK EV NG+ + I+ K+++A GAW +++L +++ Q V KG
Sbjct: 168 IKRYESTEVTSIERHNGYYSVKTDQSSTIEAHKIIVAGGAWSSQLLTQYHLQRQVIGVKG 227
Query: 219 QLRDYYFSNINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEE 278
++ N + + I+P + +GA+ E + + + + +D
Sbjct: 228 EV--ILLENNDLSLTETLFMTNGCYIVPKQPNRFLIGATSEFN-NYSVGTTDEGMDWLLR 284
Query: 279 QAIGYFPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGY 338
A PQLK + + G+R YT P + +G Y SG G+ + P+IG
Sbjct: 285 HAYHRVPQLKDSHILKKWSGVRPYTEKEMPVMDQID--DGLYVISGHYRNGILLSPIIGR 342
Query: 339 ELCQLILNKENQLNLEDYDITK 360
++ +L+ + +T+
Sbjct: 343 DIANWLLSGIKPSRYSSFTVTR 364
>gi|22969884|ref|ZP_00017087.1| hypothetical protein [Chloroflexus
aurantiacus]
Length = 388
Score = 57.4 bits (137), Expect = 4e-07
Identities = 80/388 (20%), Positives = 167/388 (42%), Gaps = 49/388 (12%)
Query: 3 KIAIIGAGAVGATLAYYLSKEKDIQVTVFDYG----VGQATKAAAGIISPWFSKRRNKAW 58
++ IIGAG +GA++A++L++ V + + G ++AAG + FS R N
Sbjct: 9 QVVIIGAGVIGASIAFHLAERGLRDVIILEREETEISGSTARSAAG-VRHQFSSRTNVLL 67
Query: 59 YRMARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLI 118
R + +L ++ G + Q +FL+ +++ + + +A +R L
Sbjct: 68 SRYS------IERLRHFEEEVGGHAELRQVGYLFLINDEQTWAQYMRNVAMQRELGV--- 118
Query: 119 GDLQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILL------EASGVNVIKDE 172
+++L +EA P++ + L+ A+ G D I L + GV + +
Sbjct: 119 -RVEVLTPAEAARFIPQMRT-DDLIGATFGPDDGYCDPYGIALGYLRAAQRHGVRLYRGR 176
Query: 173 VHFTITDNGFRVQG------------IDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQL 220
+T GF +QG + + ++ +G W ++ + VRP +
Sbjct: 177 ---PVT--GFHIQGGRVTAVETPAGTVGCEFVINCAGPWAGEVAALAGLDLPVRPYR--- 228
Query: 221 RDYYFSN---INTGKYPVVMPEGELDIIPFDNGKVSVGASHEND-MAFDLNIDFKVLDKF 276
R+ Y + + P+ + G + + + +G S+ N+ + + N+D+ L+
Sbjct: 229 RNVYMTTPFPAISAPIPLTIDVGSGFYMRREGQSILMGRSNPNEPSSTNTNVDWDWLEAV 288
Query: 277 EEQAIGYFPQLKKADTTSER--VGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGP 334
E I FP L+ A ++ G+ T D +P G P + G ASG G+ P
Sbjct: 289 IEAGIHRFPILETAGLAEQQCWAGLYEITPDHNPILGRHPDLAGYIDASGFSGHGIMHAP 348
Query: 335 LIGYELCQLILN-KENQLNLEDYDITKY 361
G + + +++ + + +N+++ I ++
Sbjct: 349 ATGLLIAEEVIDGRAHTINIDELRIDRF 376
>gi|25012559|gb|AAN71380.1| RE37361p [Drosophila melanogaster]
Length = 907
Score = 56.6 bits (135), Expect = 6e-07
Identities = 83/391 (21%), Positives = 155/391 (39%), Gaps = 44/391 (11%)
Query: 4 IAIIGAGAVGATLAYYLSKEKDIQVTVFDYG--VGQATKAAAGIISPWFSKRRNKAWYRM 61
+ +IG G+ G Y+L++ + ++ + + T AG++ W + + +
Sbjct: 52 VVVIGGGSAGCHTLYHLAR-RGVKAVLLERAQLTAGTTWHTAGLL--WRLRPNDVDIQLL 108
Query: 62 ARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGDL 121
A +++ L+++ + Q G + +E++L+ LA + S L +
Sbjct: 109 AN-----SRRMLQQLEEETELDPGWIQNGGIFIAHNETRLDEYRRLAT---VGSALGIEN 160
Query: 122 QILNKSEANTHFPELD--GYEQLLYASGGARVEGADLTRILLEAS---GVNVIK----DE 172
Q+L+ + FP LD + LY+ G ++ A L L +A+ G VI+ D+
Sbjct: 161 QVLSPEDTQKLFPLLDPSAFVGALYSPGDGVMDPAMLCAALKKAATNLGAQVIENCGVDD 220
Query: 173 VHFTITDNGFRVQG-------IDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYF 225
+ T G +V G I +K+V A+G W ++ H + + P K R Y
Sbjct: 221 LLLEQTARGKKVVGVSTPFGDIKAEKVVNATGVWGRDLVARHGTHLPLVPMK---RAYIV 277
Query: 226 SNINTG--KYPVVMPEGELDIIPFDNGKVSVGASHEN---------DMAFDL-NIDFKVL 273
S G P + + +G N D F L +D+ V
Sbjct: 278 SESIPGVRGLPNIRDHDYSTYFRIQGDAICMGGYEPNPILLEPVPKDFHFGLYELDWSVF 337
Query: 274 DKFEEQAIGYFPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVG 333
+ E A P K S G ++T D P GP P ++G Y G S G+ G
Sbjct: 338 ETHVEGAQELCPSYAKYGVKSTVCGPESFTPDHKPLMGPDPNLDGLYHNCGFNSAGMMFG 397
Query: 334 PLIGYELCQLILNKENQLNLEDYDITKYVKK 364
G + ++ + L + +D+ ++ ++
Sbjct: 398 GGCGEQTALWVIQGQPDLPMFGFDLRRFTQE 428
>gi|23058001|ref|ZP_00083112.1| hypothetical protein [Pseudomonas
fluorescens PfO-1]
Length = 222
Score = 56.2 bits (134), Expect = 8e-07
Identities = 39/146 (26%), Positives = 69/146 (46%), Gaps = 6/146 (4%)
Query: 190 DKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYP-VVMPEGELDIIPFD 248
D++VL +GAW ++L + + V P KGQ+ Y P +V+ +G IP
Sbjct: 54 DQVVLTAGAWSGELLKNLDLSLPVEPVKGQMILY---KCAADFLPSMVLAKGRY-AIPRR 109
Query: 249 NGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAYTSDFSP 308
+G + +G++ E++ FD L+ + A+ P L A+ G+R + + P
Sbjct: 110 DGHILIGSTLEHE-GFDKTPTDNALESLKASAVELLPALADAEVVGHWAGLRPGSPEGIP 168
Query: 309 FFGPVPCMEGAYAASGLGSTGLTVGP 334
+ G VP ++G + G GL + P
Sbjct: 169 YIGRVPGVDGLWLNCGHYRNGLVLAP 194
>gi|22999833|ref|ZP_00043793.1| hypothetical protein [Magnetococcus
sp. MC-1]
Length = 371
Score = 55.1 bits (131), Expect = 2e-06
Identities = 89/380 (23%), Positives = 156/380 (40%), Gaps = 62/380 (16%)
Query: 1 MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGV--GQATKAAAGIISPWFSKRRNKAW 58
M+ + I+GAG +G A+ L E+ +VT+ + + +++ AAAGI+ A+
Sbjct: 1 MEHVVIVGAGVMGTACAFRL-LEQGYRVTLLEKALPGAESSAAAAGILGAQSEVSGGGAF 59
Query: 59 YRMARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLI 118
+ + V LQ Y+++GV + D ++ L A + LE L
Sbjct: 60 LDLCVASRGMFRDFVGRLQDVSGVHCGYEESGVLEVAMDPAE-GRLAAGRAEWMLERDL- 117
Query: 119 GDLQILNKSEANTHFPELDGYEQLLYAS------------------------GGARVEGA 154
++IL++ EA P L E+++ A+ GG G
Sbjct: 118 -RVEILDRDEARRLEPALS--ERIIGANFYPDDHQVEPVALSRALAAAVARLGGQFRSGV 174
Query: 155 DLTRILLEASGVNVI--KDEVHFTITDNGFRVQGIDFDKLVLASGAWLAKILDEHNYQVD 212
+T + ++ V + +DEV I D +++A GAW + I +
Sbjct: 175 QVTGLHVQGERVVGVASRDEV-------------IHGDHVIIAGGAWSSMIGGLPPLRTQ 221
Query: 213 VRPQKGQ-----LRDYYFSNINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLN 267
V+P GQ +R F ++ G ++P + G+V +G++ E D FD
Sbjct: 222 VKPMSGQILQVEMRPPAFRHVVYGYKGYIVPRAD--------GRVVMGSTLE-DRGFDKA 272
Query: 268 IDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGS 327
+ + L + + A+ P LK+A T G+R T D P G P G Y A+G
Sbjct: 273 VTTEGLQRITQMALEMVPLLKQARMTDAWAGLRPATGDGHPLLGQGP-WPGLYFATGHYR 331
Query: 328 TGLTVGPLIGYELCQLILNK 347
G+ + P+ Q I+ +
Sbjct: 332 NGILMTPITAEVTTQFIMGQ 351
>gi|20130091|ref|NP_611263.1| CG6385-PA [Drosophila melanogaster]
gi|7302718|gb|AAF57796.1| CG6385-PA [Drosophila melanogaster]
Length = 894
Score = 54.7 bits (130), Expect = 3e-06
Identities = 82/391 (20%), Positives = 154/391 (38%), Gaps = 44/391 (11%)
Query: 4 IAIIGAGAVGATLAYYLSKEKDIQVTVFDYG--VGQATKAAAGIISPWFSKRRNKAWYRM 61
+ +IG G+ G Y+L++ + ++ + + T AG++ W + + +
Sbjct: 39 VVVIGGGSAGCHTLYHLAR-RGVKAVLLERAQLTAGTTWHTAGLL--WRLRPNDVDIQLL 95
Query: 62 ARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGDL 121
A +++ L+++ + Q G + +E++L+ LA + S L +
Sbjct: 96 AN-----SRRMLQQLEEETELDPGWIQNGGIFIAHNETRLDEYRRLAT---VGSALGIEN 147
Query: 122 QILNKSEANTHFPELD--GYEQLLYASGGARVEGADLTRILLEAS---GVNVIK----DE 172
Q+L+ + FP LD + LY+ G ++ A L L +A+ G VI+ D+
Sbjct: 148 QVLSPEDTQKLFPLLDPSAFVGALYSPGDGVMDPAMLCAALKKAATNLGAQVIENCGVDD 207
Query: 173 VHFTITDNGFRVQG-------IDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYF 225
+ T G +V G I +K+V A+G W ++ H + + P K Y
Sbjct: 208 LLLEQTARGKKVVGVSTPFGDIKAEKVVNATGVWGRDLVARHGTHLPLVPMK---HAYIV 264
Query: 226 SNINTG--KYPVVMPEGELDIIPFDNGKVSVGASHEN---------DMAFDL-NIDFKVL 273
S G P + + +G N D F L +D+ V
Sbjct: 265 SESIPGVRGLPNIRDHDYSTYFRIQGDAICMGGYEPNPILLEPVPKDFHFGLYELDWSVF 324
Query: 274 DKFEEQAIGYFPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVG 333
+ E A P K S G ++T D P GP P ++G Y G S G+ G
Sbjct: 325 ETHVEGAQKLCPSYAKYGVKSTVCGPESFTPDHKPLMGPDPNLDGLYHNCGFNSAGMMFG 384
Query: 334 PLIGYELCQLILNKENQLNLEDYDITKYVKK 364
G + ++ + L + +D+ ++ ++
Sbjct: 385 GGCGEQTALWVIQGQPDLPMFGFDLRRFTQE 415
>gi|26991143|ref|NP_746568.1| nopaline dehydrogenase, putative
[Pseudomonas putida KT2440]
gi|24986185|gb|AAN70032.1|AE016642_2 nopaline dehydrogenase,
putative [Pseudomonas putida KT2440]
Length = 375
Score = 54.3 bits (129), Expect = 3e-06
Identities = 77/339 (22%), Positives = 143/339 (41%), Gaps = 31/339 (9%)
Query: 4 IAIIGAGAVGATLAYYLSKEKDIQVTV----FDYGVGQATKAAAGIISPWFSKRRNKAWY 59
+ IIG G VGA + Y L+ K + + DY +A KA G++ R+ +
Sbjct: 7 VIIIGGGMVGAAIGYGLAGGKRRILMLDGADTDY---RAAKANFGLVWAHGKGMRDPNYQ 63
Query: 60 RMARLGADFYSKLVTDLQKD-GFETKFYQQTGV-FLLKKDESQLESLFALADKRRLESPL 117
R++ A + + L+++ G + Q+ G+ F L DE + A+ R L
Sbjct: 64 RLSLNAAKAWPSFASQLEEESGISLDYEQKGGLNFCLSDDEFDARAK-AMDAWNRQTPEL 122
Query: 118 IGDLQILNKSEANTHFPELDGYEQLLYASGGARVEGADLTRILLEASGVNVIKD---EVH 174
+L+++E FP + + ++ AS G A+ R+L + + + +
Sbjct: 123 APSAHMLDRAELLRRFPTMKIGKAVVGASFGEFDGHANPLRLLAAMQKAFMARGGQLQNN 182
Query: 175 FTITD------NGFRVQGIDF----DKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYY 224
+TD GF VQ ++ +++V+A+G A + V +RPQ+GQL
Sbjct: 183 RPVTDIRRLSGGGFEVQSGEYRAQCERIVIAAGLGCAALGPMVGLNVPIRPQRGQL---- 238
Query: 225 FSNINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYF 284
+ T + ++P + G V +G + E ++ FDL + + +A+
Sbjct: 239 ---LVTERLAPLLPIPGSGLRQTAEGTVMIGVTQE-EVGFDLATTTEGAARITRKALKIL 294
Query: 285 PQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAAS 323
P L +A + +R T D +P + GA A+
Sbjct: 295 PDLAQAKLVRQWSCLRIMTPDGNPVYARSLTHPGAEIAT 333
>gi|15614604|ref|NP_242907.1| BH2041~unknown conserved protein
[Bacillus halodurans]
gi|25490187|pir||A83905 hypothetical protein BH2041 [imported] -
Bacillus halodurans (strain C-125)
gi|10174660|dbj|BAB05760.1| BH2041~unknown conserved protein
[Bacillus halodurans]
Length = 376
Score = 54.3 bits (129), Expect = 4e-06
Identities = 87/388 (22%), Positives = 161/388 (41%), Gaps = 54/388 (13%)
Query: 4 IAIIGAGAVGATLAYYLSKEKDIQVTVFDYGVGQ-ATKAAAGIISPWFSK-RRNKAWYRM 61
+ IIG G +G ++A + +K+ + V +GQ A+ AG+++ R+ +
Sbjct: 7 LCIIGGGVIGLSIAIHTAKKGANVLVVEKDRLGQEASGGRAGLLTTVAEGVDRHDPYSIF 66
Query: 62 ARLGADFYSKLVTDL-QKDGFETKFYQQTGVFL-LKKDESQLESLFALADKRRLESPLIG 119
+R + + + +L +K + +Q + L L + E+ L L D +++
Sbjct: 67 SRESLQYLLQWIPELEEKTQISSGLVKQNLLRLALHEQEAAL-----LEDHWLMQTETNS 121
Query: 120 DLQILNKSEANTHFPEL-----------DGY--EQLLYASGGARVEGADLTRILLEASGV 166
++ L+ EA T P L D Y E LY + AR+ I + +
Sbjct: 122 QIKRLSAEEARTLEPLLSNDLIMAICSPDEYHLEPSLYLNALARMARQLGVTIREQTEVI 181
Query: 167 NVI--KDEVHFTITDNGFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYY 224
I + ++ +T+ G ++ + +LA+GAW + +V V P KGQL
Sbjct: 182 QFIHQNNRMYGVVTNTGTQIVA---ETTILAAGAWSHLLSRLAKVKVPVYPLKGQL---- 234
Query: 225 FSNINTGKYPVVMPEGELD-----------IIPFDNGKVSVGASHENDMAFDLNIDFKVL 273
+V+ +G+ D I+ NG V +GA+ E + F+ I K +
Sbjct: 235 ----------IVLKQGDTDLNVMINTSKGYILSKPNGTVVLGATSEKE-KFNKFITAKGI 283
Query: 274 DKFEEQAIGYFPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVG 333
+ Y P+LK + G+R T D P G VP EG Y A+G G+ +
Sbjct: 284 QELLP-LFDYVPELKNWEIQHLWAGLRPATPDGQPIIGYVPEWEGWYLATGHSRHGVLLS 342
Query: 334 PLIGYELCQLILNKENQLNLEDYDITKY 361
G+ + + + K+ L + + ++
Sbjct: 343 GWTGHLVAEELEGKDQSHKLGSFGLHRF 370
>gi|32473614|ref|NP_866608.1| D-amino acid dehydrogenase, small
chain [Pirellula sp.]
gi|32398294|emb|CAD78389.1| D-amino acid dehydrogenase, small chain
[Pirellula sp.]
Length = 456
Score = 53.9 bits (128), Expect = 4e-06
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 11/176 (6%)
Query: 190 DKLVLASGAWLAKILDEHNYQVDVRPQKGQLRDYYFSNI----NTGKYPVVMPEGELDII 245
D V A GAW K V V+P KG Y I ++ + ++ PE ++ +
Sbjct: 288 DYFVFAMGAWSTKWESALQCSVPVQPGKG-----YSVTIEKPEHSPNHAILFPEHKVGVS 342
Query: 246 PFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAYTSD 305
PFD G + G+ E +D +I + + + A Y S+ G R T D
Sbjct: 343 PFDEG-LRFGSMMEF-AGYDTSIPRHRIQQLRDSARPYLVASVDGPAQSQWYGWRPMTWD 400
Query: 306 FSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITKY 361
P G +P + A+G GL++ P G + ++I ++ L+ Y T++
Sbjct: 401 SLPIIGTLPELSNGLLATGHNMLGLSLAPATGRLIGEIITGQQTHLDPAPYSPTRF 456
>gi|15606107|ref|NP_213484.1| hypothetical protein [Aquifex
aeolicus]
gi|7514528|pir||H70361 conserved hypothetical protein aq_707 -
Aquifex aeolicus
gi|2983300|gb|AAC06892.1| hypothetical protein [Aquifex aeolicus
VF5]
Length = 353
Score = 53.1 bits (126), Expect = 6e-06
Identities = 85/328 (25%), Positives = 138/328 (41%), Gaps = 46/328 (14%)
Query: 3 KIAIIGAGAVGATLAY-YLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYRM 61
+I +IG G +G ++ L D+++ V D G A+ A G+++P FS+ + R
Sbjct: 2 EILVIGGGVIGLSIGVELLLAGHDVRLLVRDKREG-ASWVAGGMLAP-FSEGLRGDFLRF 59
Query: 62 ARLGADFYSKLVTDLQKDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGDL 121
+ + + L++ F+ Q G+ + DE + + L D + + +L
Sbjct: 60 SVESLRLWHDYLERLKEISGRKVFFSQ-GILRVAFDEKEEKKL--REDVKFYSQEVCQNL 116
Query: 122 QILNKSEANTHFPELDGYEQ--LLYASGGARVEGADLTRIL---LEASGVNVIKDEVHFT 176
+ E FP L + ++Y G V+ +L L E G +I ++
Sbjct: 117 ISYDAEELLKEFPYLSSEVRYGVIYGDEG-NVDTEELMEALYVAFEKLGGEIINEDA-VK 174
Query: 177 ITDNGFRVQGI-----DF--DKLVLASGAWLAKILDEHNYQVDVRPQKGQ-------LRD 222
I NG R++ + +F D V A+GAWL + ++ V P KGQ L+D
Sbjct: 175 ILRNGERIEKVFGFFEEFTADYYVFATGAWL-----KEHFGFPVFPVKGQILRVEAPLKD 229
Query: 223 YYFSNINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIG 282
Y V+ IIP + + +GA+ EN FD + + K E AI
Sbjct: 230 Y------------VVYSSRAYIIPREK-DLLIGATTEN-AGFDTKTTLEGVKKLSEGAIS 275
Query: 283 YFPQLKKADTTSERVGIRAYTSDFSPFF 310
PQLK+A RVG R T D P F
Sbjct: 276 SVPQLKEAQLLEVRVGFRPGTPDELPVF 303
>gi|23060393|ref|ZP_00085300.1| hypothetical protein [Pseudomonas
fluorescens PfO-1]
Length = 484
Score = 50.4 bits (119), Expect = 5e-05
Identities = 77/345 (22%), Positives = 141/345 (40%), Gaps = 30/345 (8%)
Query: 18 YYLSKEKDIQVTVFDYGVGQATKAAAGIISPWFSKRRNKAWYRMARLGADFYSKLVTDLQ 77
Y ++KE+ ++++ + +A GI S + + A+L D +K + L+
Sbjct: 151 YAVNKERMVRLSEYSRDCLDELRAETGIAYEGRSLGTTQLFRTQAQL--DNAAKDIAVLK 208
Query: 78 KDGFETKFYQQTGVFLLKKDESQLESLFALADKRRLESPLIGDLQILNKSEANTHFPELD 137
+ G + + G+ ++ + + + LA RL + GD QI A
Sbjct: 209 ESGVPFEVLDRAGIARVEPALAGVTDI--LAGALRLPNDQTGDCQIFTTRLA-------- 258
Query: 138 GYEQLLYASGGARVEGADLTRILLEASGVNVIKDEVHFTITDNGFRVQGIDFDKLVLASG 197
++ G G D+ R L+ +G D ++ D D+ VLA G
Sbjct: 259 ---EMAIKLGVEFRFGQDIQR--LDFAG-----DRINGVWIDGKLETA----DRYVLALG 304
Query: 198 AWLAKILDEHNYQVDVRPQKGQLRDYYFSNINTGKYPVVMPEG-ELDIIPFDNGKVSVGA 256
++ ++L + V P KG +N ++ E ++ I FDN ++ VG
Sbjct: 305 SYSPQLLKPLGIKAPVYPLKGYSLTVPITNPAMAPTSTILDETYKVAITRFDN-RIRVGG 363
Query: 257 SHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAYTSDFSPFFGPVPCM 316
E FDL+++ + + E +PQ S G+R T D +P G P
Sbjct: 364 MAE-IAGFDLSLNPRRRETLEMIVNDLYPQGGNLAEASFWTGLRPTTPDGTPIVGATP-F 421
Query: 317 EGAYAASGLGSTGLTVGPLIGYELCQLILNKENQLNLEDYDITKY 361
+ + +G G+ G T+ G L L+ K+ Q++ E DI++Y
Sbjct: 422 KNLFLNTGHGTLGWTMACGSGRLLADLMAKKKPQISAEGLDISRY 466
>gi|19554205|ref|NP_602207.1| D-amino acid dehydrogenase subunit
[Corynebacterium glutamicum ATCC 13032]
gi|21325785|dbj|BAC00406.1| Glycine/D-amino acid oxidases
(deaminating) [Corynebacterium glutamicum ATCC 13032]
Length = 410
Score = 50.1 bits (118), Expect = 7e-05
Identities = 53/200 (26%), Positives = 82/200 (40%), Gaps = 18/200 (9%)
Query: 163 ASGVNVIKDEVHFTITDNGFRVQGIDFDKLVLASGAWLAKILDEHNYQVDVRPQKGQLRD 222
A V+V K + I +G R + DK+V+A+GAWL + E+ + V+ +G
Sbjct: 221 AEVVHVAKGDRPAVILADGSREEA---DKVVVATGAWLPGLTREYGVKTLVQAGRG---- 273
Query: 223 YYFSNINT--GKYPVVMPEGELDIIPFDNGKVSVGASHE---NDMAFDLNIDFKVLDKFE 277
Y FS K+ V +P + P++ G+ + + E D F +D
Sbjct: 274 YSFSVATDIPAKHSVYLPHHRMACTPYE-GRFRIAGTMEFRGPDEPFQQG----RVDAIV 328
Query: 278 EQAIGYFPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIG 337
QA + D E VG R T D P G E Y A G G G+ +GP G
Sbjct: 329 SQAKKVMRGIDFNDRQDEWVGSRPVTPDGRPLIGQTKA-ENIYVAGGHGMWGVVLGPATG 387
Query: 338 YELCQLILNKENQLNLEDYD 357
L +L+ ++ +D
Sbjct: 388 KYLAELMATGNTNPIIKPFD 407
Database: nr
Posted date: Aug 11, 2003 9:58 AM
Number of letters in database: 479,114,161
Number of sequences in database: 1,487,057
Lambda K H
0.319 0.139 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 345,493,875
Number of Sequences: 1487057
Number of extensions: 15139298
Number of successful extensions: 38704
Number of sequences better than 1.0e-04: 82
Number of HSP's better than 0.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 38574
Number of HSP's gapped (non-prelim): 92
length of query: 367
length of database: 479,114,161
effective HSP length: 125
effective length of query: 242
effective length of database: 293,232,036
effective search space: 70962152712
effective search space used: 70962152712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 117 (49.7 bits)