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Cancer Genome Anatomy Project |
| NCI > CGAP > GAI > SNP Maps > Chr 12 > SNPs Localized to Interval 8 |
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D12S368 - D12S83 68.8 cM - 77.0 cM / 227.79 cR - 269.68 cR |
| UniGene | Gene Symbol | Description | SNP IDs | SNP Summary | CGAP Gene Info |
| Confirmed SNPs | |||||
| Hs.527861 | OS9 | Amplified in osteosarcoma | CGAP-C-2393 |
SNPs | Gene Info |
| Validated SNPs | |||||
| Hs.433845 | KRT5 | Keratin 5 | CGAP-C-47793 |
SNPs | Gene Info |
| Hs.6147 | TENC1 | Tensin like C1 domain containing phosphatase (tensin 2) | CGAP-C-62513 |
SNPs | Gene Info |
| Hs.9911 | C12orf44 | Chromosome 12 open reading frame 44 | CGAP-C-57630 |
SNPs | Gene Info |
| Hs.533782 | KRT8 | Keratin 8 | CGAP-C-627580 |
SNPs | Gene Info |
| Hs.80828 | KRT1 | Keratin 1 | CGAP-C-61954 |
SNPs | Gene Info |
| Hs.505662 | PPP1R1A | Protein phosphatase 1, regulatory (inhibitor) subunit 1A | CGAP-C-51817 |
SNPs | Gene Info |
| Hs.658823 | HOXC9 | Homeobox C9 | CGAP-C-618103 |
SNPs | Gene Info |
| Hs.632721 | SMUG1 | Single-strand-selective monofunctional uracil-DNA glycosylase 1 | CGAP-C-239346 |
SNPs | Gene Info |
| Hs.349283 | CBX5 | Chromobox homolog 5 (HP1 alpha homolog, Drosophila) | CGAP-C-602566 CGAP-C-602567 CGAP-C-630439 |
SNPs | Gene Info |
| Hs.656277 | LOC728844 | Hypothetical LOC728844 | CGAP-C-59628 |
SNPs | Gene Info |
| Hs.534450 | ORMDL2 | ORM1-like 2 (S. cerevisiae) | CGAP-C-606878 |
SNPs | Gene Info |
| Hs.19192 | CDK2 | Cyclin-dependent kinase 2 | CGAP-C-629171 |
SNPs | Gene Info |
| Hs.524488 | DGKA | Diacylglycerol kinase, alpha 80kDa | CGAP-C-621734 |
SNPs | Gene Info |
| Hs.715526 | CS | Citrate synthase | CGAP-C-258874 |
SNPs | Gene Info |
| Hs.714794 | - | CDNA FLJ39093 fis, clone NT2RP7020112 | CGAP-C-53692 |
SNPs | Gene Info |
| Hs.118631 | TIMELESS | Timeless homolog (Drosophila) | CGAP-C-623686 |
SNPs | Gene Info |
| Hs.42957 | METTL1 | Methyltransferase like 1 | CGAP-C-257469 |
SNPs | Gene Info |
| Hs.715769 | - | Transcribed locus | CGAP-C-55699 |
SNPs | Gene Info |
| Hs.162757 | LRP1 | Low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor) | CGAP-C-606056 |
SNPs | Gene Info |
| Hs.524518 | STAT6 | Signal transducer and activator of transcription 6, interleukin-4 induced | CGAP-C-48027 CGAP-C-240633 |
SNPs | Gene Info |
| Hs.591040 | TMEM194A | Transmembrane protein 194A | CGAP-C-239335 CGAP-C-239337 CGAP-C-603129 |
SNPs | Gene Info |
| Hs.632709 | MARCH9 | Membrane-associated ring finger (C3HC4) 9 | CGAP-C-265490 |
SNPs | Gene Info |
| Hs.632854 | - | Transcribed locus, strongly similar to XP_001718768.1 PREDICTED: similar to hCG2014417 [Homo sapiens] | CGAP-C-629980 |
SNPs | Gene Info |
| Hs.61188 | XRCC6BP1 | XRCC6 binding protein 1 | CGAP-C-55119 |
SNPs | Gene Info |
| Predicted SNPs | |||||
| Hs.1497 | RARG | Retinoic acid receptor, gamma | CGAP-C-2459254 |
SNPs | Gene Info |
| Hs.433845 | KRT5 | Keratin 5 | CGAP-C-2440350 CGAP-C-2440351 CGAP-C-2440352 CGAP-C-2440357 CGAP-C-2440358 CGAP-C-2440359 CGAP-C-2440362 CGAP-C-2440364 |
SNPs | Gene Info |
| Hs.343334 | SPRYD3 | SPRY domain containing 3 | CGAP-C-2425935 |
SNPs | Gene Info |
| Hs.447471 | - | Transcribed locus, strongly similar to NP_033474.1 tubulin, alpha 1C [Mus musculus] | CGAP-C-2481119 CGAP-C-2481120 CGAP-C-2481121 CGAP-C-2481122 CGAP-C-2481123 |
SNPs | Gene Info |
| Hs.652390 | TUBA1C | Tubulin, alpha 1c | CGAP-C-2431809 CGAP-C-2431810 CGAP-C-2431814 CGAP-C-2431815 CGAP-C-2431816 CGAP-C-2431817 CGAP-C-2431818 CGAP-C-2431819 CGAP-C-2431824 CGAP-C-2431825 CGAP-C-2431826 CGAP-C-2431827 CGAP-C-2431828 CGAP-C-2431831 CGAP-C-2431841 CGAP-C-2431842 CGAP-C-2431843 |
SNPs | Gene Info |
| Hs.649191 | SP1 | Sp1 transcription factor | CGAP-C-2458837 |
SNPs | Gene Info |
| Hs.6147 | TENC1 | Tensin like C1 domain containing phosphatase (tensin 2) | CGAP-C-2466686 |
SNPs | Gene Info |
| Hs.9911 | C12orf44 | Chromosome 12 open reading frame 44 | CGAP-C-2389218 CGAP-C-2389221 |
SNPs | Gene Info |
| Hs.533782 | KRT8 | Keratin 8 | CGAP-C-2482765 CGAP-C-2482766 |
SNPs | Gene Info |
| Hs.655988 | C12orf10 | Chromosome 12 open reading frame 10 | CGAP-C-2440011 |
SNPs | Gene Info |
| Hs.369144 | AAAS | Achalasia, adrenocortical insufficiency, alacrimia (Allgrove, triple-A) | CGAP-C-2436827 CGAP-C-2436833 CGAP-C-2436838 |
SNPs | Gene Info |
| Hs.80828 | KRT1 | Keratin 1 | CGAP-C-2409066 |
SNPs | Gene Info |
| Hs.654470 | ITGB7 | Integrin, beta 7 | CGAP-C-2391606 |
SNPs | Gene Info |
| Hs.274313 | IGFBP6 | Insulin-like growth factor binding protein 6 | CGAP-C-2421835 |
SNPs | Gene Info |
| Hs.12286 | ATF7 | Activating transcription factor 7 | CGAP-C-2486346 |
SNPs | Gene Info |
| Hs.156667 | CALCOCO1 | Calcium binding and coiled-coil domain 1 | CGAP-C-2422775 CGAP-C-2422780 |
SNPs | Gene Info |
| Hs.407202 | GRASP | GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein | CGAP-C-2387480 |
SNPs | Gene Info |
| Hs.524464 | ATP5G2 | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9) | CGAP-C-2419036 |
SNPs | Gene Info |
| Hs.326 | TARBP2 | TAR (HIV-1) RNA binding protein 2 | CGAP-C-2424325 |
SNPs | Gene Info |
| Hs.524390 | TUBA1B | Tubulin, alpha 1b | CGAP-C-2450597 CGAP-C-2450602 CGAP-C-2450607 CGAP-C-2450623 CGAP-C-2450627 CGAP-C-2450632 CGAP-C-2450633 CGAP-C-2450637 CGAP-C-2450638 CGAP-C-2450639 CGAP-C-2450640 CGAP-C-2450641 CGAP-C-2450652 CGAP-C-2450657 CGAP-C-2450668 CGAP-C-2450679 CGAP-C-2450686 CGAP-C-2450688 CGAP-C-2450691 CGAP-C-2450707 CGAP-C-2450708 CGAP-C-2450709 CGAP-C-2450717 CGAP-C-2450718 CGAP-C-2450720 CGAP-C-2450721 CGAP-C-2450739 CGAP-C-2450743 CGAP-C-2450748 CGAP-C-2450770 CGAP-C-2481118 |
SNPs | Gene Info |
| Hs.712735 | TUBA1B | Tubulin, alpha 1b | CGAP-C-2450575 CGAP-C-2450576 CGAP-C-2450577 CGAP-C-2450584 CGAP-C-2450613 |
SNPs | Gene Info |
| Hs.118608 | HOXC13 | Homeobox C13 | CGAP-C-2400731 |
SNPs | Gene Info |
| Hs.505653 | ZNF385A | Zinc finger protein 385A | CGAP-C-2437387 CGAP-C-2437389 |
SNPs | Gene Info |
| Hs.33187 | KIAA0748 | KIAA0748 | CGAP-C-2475231 CGAP-C-2475232 |
SNPs | Gene Info |
| Hs.505654 | ITGA5 | Integrin, alpha 5 (fibronectin receptor, alpha polypeptide) | CGAP-C-2447527 |
SNPs | Gene Info |
| Hs.505662 | PPP1R1A | Protein phosphatase 1, regulatory (inhibitor) subunit 1A | CGAP-C-2465776 CGAP-C-2465777 |
SNPs | Gene Info |
| Hs.632721 | SMUG1 | Single-strand-selective monofunctional uracil-DNA glycosylase 1 | CGAP-C-2389890 CGAP-C-2389891 |
SNPs | Gene Info |
| Hs.505652 | COPZ1 | Coatomer protein complex, subunit zeta 1 | CGAP-C-2404655 CGAP-C-2404659 CGAP-C-2404660 CGAP-C-2404663 CGAP-C-2404665 CGAP-C-2404666 |
SNPs | Gene Info |
| Hs.349283 | CBX5 | Chromobox homolog 5 (HP1 alpha homolog, Drosophila) | CGAP-C-2447960 CGAP-C-2447961 CGAP-C-2447962 CGAP-C-2447965 CGAP-C-2447968 |
SNPs | Gene Info |
| Hs.524484 | ITGA7 | Integrin, alpha 7 | CGAP-C-2399418 |
SNPs | Gene Info |
| Hs.524476 | GTSF1 | Gametocyte specific factor 1 | CGAP-C-2444195 |
SNPs | Gene Info |
| Hs.656277 | LOC728844 | Hypothetical LOC728844 | CGAP-C-2458383 |
SNPs | Gene Info |
| Hs.445570 | CD63 | CD63 molecule | CGAP-C-2419846 CGAP-C-2419852 CGAP-C-2419853 CGAP-C-2419854 CGAP-C-2419855 |
SNPs | Gene Info |
| Hs.505676 | CIP29 | Cytokine induced protein 29 kDa | CGAP-C-2444262 CGAP-C-2444267 CGAP-C-2444268 CGAP-C-2444269 CGAP-C-2444270 CGAP-C-2444271 |
SNPs | Gene Info |
| Hs.600940 | RDH5 | Retinol dehydrogenase 5 (11-cis/9-cis) | CGAP-C-2452994 |
SNPs | Gene Info |
| Hs.616500 | LOC440104 | Similar to RIKEN cDNA 1110012D08 | CGAP-C-2411626 |
SNPs | Gene Info |
| Hs.534450 | ORMDL2 | ORM1-like 2 (S. cerevisiae) | CGAP-C-2417487 CGAP-C-2417489 |
SNPs | Gene Info |
| Hs.709320 | DNAJC14 | DnaJ (Hsp40) homolog, subfamily C, member 14 | CGAP-C-2436757 CGAP-C-2436758 CGAP-C-2436759 |
SNPs | Gene Info |
| Hs.19192 | CDK2 | Cyclin-dependent kinase 2 | CGAP-C-2416100 CGAP-C-2416101 CGAP-C-2416102 CGAP-C-2416103 CGAP-C-2416104 |
SNPs | Gene Info |
| Hs.95972 | SILV | Silver homolog (mouse) | CGAP-C-2405933 CGAP-C-2405934 |
SNPs | Gene Info |
| Hs.567328 | RAB5B | RAB5B, member RAS oncogene family | CGAP-C-2409582 CGAP-C-2409584 CGAP-C-2409588 CGAP-C-2409589 |
SNPs | Gene Info |
| Hs.632729 | FAM62A | Family with sequence similarity 62 (C2 domain containing), member A | CGAP-C-2393904 CGAP-C-2393912 CGAP-C-2393913 |
SNPs | Gene Info |
| Hs.236030 | SMARCC2 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 | CGAP-C-2442491 CGAP-C-2442493 CGAP-C-2442494 |
SNPs | Gene Info |
| Hs.632717 | MYL6 | Myosin, light chain 6, alkali, smooth muscle and non-muscle | CGAP-C-2430071 CGAP-C-2430076 CGAP-C-2430083 CGAP-C-2430085 CGAP-C-2430087 |
SNPs | Gene Info |
| Hs.524502 | RNF41 | Ring finger protein 41 | CGAP-C-2387439 CGAP-C-2387440 |
SNPs | Gene Info |
| Hs.8752 | CNPY2 | Canopy 2 homolog (zebrafish) | CGAP-C-2404369 CGAP-C-2404372 CGAP-C-2404375 |
SNPs | Gene Info |
| Hs.273397 | PAN2 | PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae) | CGAP-C-2459702 CGAP-C-2459703 CGAP-C-2459704 CGAP-C-2459706 CGAP-C-2459707 |
SNPs | Gene Info |
| Hs.524498 | PA2G4 | Proliferation-associated 2G4, 38kDa | CGAP-C-2473782 |
SNPs | Gene Info |
| Hs.715526 | CS | Citrate synthase | CGAP-C-2428583 |
SNPs | Gene Info |
| Hs.553221 | IKZF4 | IKAROS family zinc finger 4 (Eos) | CGAP-C-2470697 CGAP-C-2470698 |
SNPs | Gene Info |
| Hs.558403 | SUOX | Sulfite oxidase | CGAP-C-2414500 CGAP-C-2414501 |
SNPs | Gene Info |
| Hs.632703 | RPL41 | Ribosomal protein L41 | CGAP-C-2406219 CGAP-C-2406220 CGAP-C-2406221 |
SNPs | Gene Info |
| Hs.4096 | COQ10A | Coenzyme Q10 homolog A (S. cerevisiae) | CGAP-C-2399488 CGAP-C-2399489 |
SNPs | Gene Info |
| Hs.715819 | NXPH4 | Neurexophilin 4 | CGAP-C-2400063 |
SNPs | Gene Info |
| Hs.714794 | - | CDNA FLJ39093 fis, clone NT2RP7020112 | CGAP-C-2443643 |
SNPs | Gene Info |
| Hs.98309 | IL23A | Interleukin 23, alpha subunit p19 | CGAP-C-2393928 |
SNPs | Gene Info |
| Hs.715582 | NDUFA4L2 | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2 | CGAP-C-2467254 |
SNPs | Gene Info |
| Hs.75069 | SHMT2 | Serine hydroxymethyltransferase 2 (mitochondrial) | CGAP-C-2477029 CGAP-C-2477030 CGAP-C-2477031 CGAP-C-2477035 CGAP-C-2477037 CGAP-C-2477039 |
SNPs | Gene Info |
| Hs.118631 | TIMELESS | Timeless homolog (Drosophila) | CGAP-C-2479112 CGAP-C-2479113 CGAP-C-2479116 CGAP-C-2479117 CGAP-C-2479118 CGAP-C-2479119 CGAP-C-2479120 CGAP-C-2479121 CGAP-C-2479124 CGAP-C-2479125 |
SNPs | Gene Info |
| Hs.42957 | METTL1 | Methyltransferase like 1 | CGAP-C-2411364 CGAP-C-2411366 |
SNPs | Gene Info |
| Hs.289123 | DCTN2 | Dynactin 2 (p50) | CGAP-C-2453441 CGAP-C-2453445 CGAP-C-2453446 |
SNPs | Gene Info |
| Hs.406510 | ATP5B | ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide | CGAP-C-2451483 CGAP-C-2451485 CGAP-C-2451490 CGAP-C-2451494 CGAP-C-2451496 |
SNPs | Gene Info |
| Hs.591019 | B4GALNT1 | Beta-1,4-N-acetyl-galactosaminyl transferase 1 | CGAP-C-2471606 CGAP-C-2471607 |
SNPs | Gene Info |
| Hs.314263 | BAZ2A | Bromodomain adjacent to zinc finger domain, 2A | CGAP-C-2443646 CGAP-C-2443648 |
SNPs | Gene Info |
| Hs.61581 | GEFT | RhoA/RAC/CDC42 exchange factor | CGAP-C-2470786 |
SNPs | Gene Info |
| Hs.505777 | DDIT3 | DNA-damage-inducible transcript 3 | CGAP-C-2412969 |
SNPs | Gene Info |
| Hs.632702 | GLI1 | Glioma-associated oncogene homolog 1 (zinc finger protein) | CGAP-C-2468395 |
SNPs | Gene Info |
| Hs.632707 | MARS | Methionyl-tRNA synthetase | CGAP-C-2422766 |
SNPs | Gene Info |
| Hs.632704 | TSFM | Ts translation elongation factor, mitochondrial | CGAP-C-2399087 CGAP-C-2399090 CGAP-C-2399091 |
SNPs | Gene Info |
| Hs.95577 | CDK4 | Cyclin-dependent kinase 4 | CGAP-C-2413071 CGAP-C-2413074 CGAP-C-2413075 CGAP-C-2413076 |
SNPs | Gene Info |
| Hs.632854 | - | Transcribed locus, strongly similar to XP_001718768.1 PREDICTED: similar to hCG2014417 [Homo sapiens] | CGAP-C-2432152 |
SNPs | Gene Info |
| Hs.61188 | XRCC6BP1 | XRCC6 binding protein 1 | CGAP-C-2467822 |
SNPs | Gene Info |
| Comments, questions and suggestions to: Bob Clifford ( clifforr@mail.nih.gov ) |