| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
|---|---|---|---|---|---|---|---|---|---|---|
| 149619 | hypothetical | BPSS1372 | conserved hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein Pa2487 pa2487 SWALL:Q9I0Z5 (EMBL:AE004676) (90 aa) fasta scores: E(): 8.9e-12, 50% id in 80 aa | genbank | 52212812 | CAH38844.1 | 83 | 1877566 | 1877817 | |
| 149620 | hypothetical | BPSS1373 | conserved hypothetical protein Similar to Vibrio cholerae hypothetical protein Vca0740 SWALL:Q9KLK3 (EMBL:AE004403) (216 aa) fasta scores: E(): 1.8e-28, 48.34% id in 211 aa, and to Vibrio vulnificus uncharacterized protein conserved in bacteria vv20756 SWALL:AAO07687 (EMBL:AE016810) (220 aa) fasta scores: E(): 8.2e-27, 48.38% id in 217 aa, and to Rhizobium loti hypothetical protein Mll4256 SWALL:Q98EG3 (EMBL:AP003003) (209 aa) fasta scores: E(): 4.5e-26, 44.11% id in 204 aa | genbank | 52212813 | CAH38845.1 | 234 | 1878010 | 1878714 | |
| 149621 | hypothetical | BPSS1374 | putative glutathione-S-transferase Similar to Ralstonia solanacearum probable glutathione S-transferase protein rsc3070 or rs00514 SWALL:Q8XUW3 (EMBL:AL646073) (238 aa) fasta scores: E(): 4.1e-53, 59.75% id in 241 aa, and to Rhizobium meliloti probable glutathione S-transferase protein Gst12 or rb1278 or smb21449 SWALL:Q92U61 (EMBL:AL603646) (240 aa) fasta scores: E(): 1.1e-49, 56.19% id in 242 aa, and to Xanthomonas axonopodis glutathione transferase xac3203 SWALL:AAM38047 (EMBL:AE011966) (241 aa) fasta scores: E(): 1.2e-48, 56.96% id in 244 aa | genbank | 52212814 | CAH38846.1 | 242 | 1878950 | 1879678 | |
| 149622 | hypothetical | BPSS1375 | putative membrane protein C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein Pa2187 SWALL:Q9I1S8 (EMBL:AE004645) (141 aa) fasta scores: E(): 2.5e-18, 51.35% id in 111 aa, and Agrobacterium tumefaciens hypothetical protein atu3812 or agr_l_2041 SWALL:Q8U9B6 (EMBL:AE009312) (135 aa) fasta scores: E(): 8.2e-17, 45.65% id in 138 aa | genbank | 52212815 | CAH38847.1 | 185 | 1880830 | 1881387 | |
| 149623 | hypothetical | BPSS1376 | putative quinol oxidase subunit Similar to Rhodobacter sphaeroides quinol oxidase subunit II QxtB SWALL:O86081 (EMBL:AF084032) (335 aa) fasta scores: E(): 9e-62, 48.94% id in 331 aa, and to Ralstonia solanacearum putative transmembrane cytochrome bd-II oxidase rsp1206 or rs03150 SWALL:Q8XQL6 (EMBL:AL646083) (336 aa) fasta scores: E(): 7.1e-94, 69.34% id in 336 aa, and to Pseudomonas aeruginosa cyanide insensitive terminal oxidase CioB or pa3929 SWALL:O07441 (EMBL:Y10528) (335 aa) fasta scores: E(): 1.7e-66, 51.04% id in 335 aa | genbank | 52212816 | CAH38848.1 | 336 | 1882053 | 1883063 | |
| 149624 | hypothetical | BPSS1377 | putative ubiquinol cytochrome c cyanide insensitive terminal oxidase Similar to Pseudomonas aeruginosa cyanide insensitive terminal oxidase CioA or pa3930 SWALL:O07440 (EMBL:Y10528) (488 aa) fasta scores: E(): 4.2e-82, 48.84% id in 475 aa, and to Ralstonia solanacearum putative transmembrane cytochrome bd-II oxidase rsp1207 or rs03151 SWALL:Q8XQL5 (EMBL:AL646083) (482 aa) fasta scores: E(): 3.3e-117, 65.31% id in 470 aa, and to Xanthomonas campestris cyanide insensitive terminal oxidase CioA or xcc3691 SWALL:AAM43463 (EMBL:AE012490) (471 aa) fasta scores: E(): 1e-82, 50.31% id in 471 aa | genbank | 52212817 | CAH38849.1 | 481 | 1883053 | 1884498 | |
| 149625 | hypothetical | BPSS1378 | putative membrane protein Similar to Rhizobium meliloti hypothetical signal peptide protein smc00921 r00784 or smc00921 SWALL:Q92KL7 (EMBL:AL591784) (128 aa) fasta scores: E(): 1.1e-10, 45.52% id in 123 aa, and to Rhizobium loti hypothetical protein Mlr5326 SWALL:Q98C23 (EMBL:AP003006) (130 aa) fasta scores: E(): 1.1e-10, 44.44% id in 117 aa | genbank | 52212818 | CAH38850.1 | 141 | 1884733 | 1885158 | |
| 149626 | hypothetical | BPSS1379 | putative transmembrane transporter protein Similar to Oceanobacillus iheyensis cation-transporting ATPase ob0089 SWALL:BAC12045 (EMBL:AP004593) (232 aa) fasta scores: E(): 1e-20, 46.02% id in 176 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YhiD or b3508 or z4920 or ecs4388 SWALL:YHID_ECOLI (SWALL:P26606) (215 aa) fasta scores: E(): 1.8e-21, 40.84% id in 213 aa, and to Escherichia coli O6 hypothetical protein YhiD or c4319 SWALL:AAN82755 (EMBL:AE016768) (215 aa) fasta scores: E(): 2.8e-21, 40.37% id in 213 aa | genbank | 52212819 | CAH38851.1 | 231 | 1885379 | 1886074 | |
| 149627 | hypothetical | BPSS1380 | hypothetical protein No significant database matches | genbank | 52212820 | CAH38852.1 | 96 | 1886113 | 1886403 | |
| 149628 | hypothetical | BPSS1381 | putative transmembrane phospholipase protein Similar to Rhizobium meliloti putative phospholipase protein rb0094 or smb20094 SWALL:Q92X68 (EMBL:AL603642) (590 aa) fasta scores: E(): 3.3e-51, 39.47% id in 461 aa, and to Caulobacter crescentus phospholipase D family protein cc0522 SWALL:Q9AAS4 (EMBL:AE005724) (505 aa) fasta scores: E(): 1.7e-42, 36.4% id in 478 aa, and to Caulobacter crescentus membrane protein, putative cc1538 SWALL:Q9A826 (EMBL:AE005828) (239 aa) fasta scores: E(): 3.3e-14, 33.19% id in 235 aa | genbank | 52212821 | CAH38853.1 | 728 | 1886475 | 1888661 | |
| 149629 | hypothetical | BPSS1382 | putative Endonuclease/Exonuclease/phosphatase family protein Similar to Brucella melitensis dioxygenase BmeII0240 SWALL:Q8YDD7 (EMBL:AE009663) (285 aa) fasta scores: E(): 4.9e-14, 36.36% id in 231 aa, and to Rhizobium loti hypothetical protein Mlr2853 mlr2853 SWALL:Q98HI7 (EMBL:AP003000) (246 aa) fasta scores: E(): 2.2e-13, 36.54% id in 249 aa. C-terminus is extended in comparison to similar proteins | genbank | 52212822 | CAH38854.1 | 338 | 1888658 | 1889674 | |
| 149630 | hypothetical | BPSS1383 | hypothetical protein No significant database matches | genbank | 52212823 | CAH38855.1 | 162 | 1889557 | 1890045 | |
| 149631 | hypothetical | BPSS1383a | putative rotamase Weakly similar to Ralstonia solanacearum putative isomerase rotamase signal peptide protein rsc1744 or rs02932 SWALL:Q8XYL4 (EMBL:AL646066) (255 aa) fasta scores: E(): 1.3e-10, 28.44% id in 225 aa. C-terminus is similar to the C-terminal region of Nitrosomonas europaea PpiC-type peptidyl-prolyl cis-trans isomerase ne1418 SWALL:Q82UR3 (EMBL:BX321861) (264 aa) fasta scores: E(): 7.1e-10, 30.04% id in 213 aa | genbank | 52212824 | CAH38856.1 | 244 | 1890320 | 1891054 | |
| 149632 | hypothetical | BPSS1384 | putative membrane protein No significant database matches | genbank | 52212825 | CAH38857.1 | 509 | 1891215 | 1892744 | |
| 149633 | pseudogene | pseudogene | BPSS1384a | transposase (fragment) Probable gene remnant. Similar to the C-terminal regions of Escherichia coli transposase for transposon Tn1721 TnpA SWALL:TNP9_ECOLI (SWALL:P51565) (988 aa) fasta scores: E(): 6.2e-13, 48.71% id in 117 aa, and Pseudomonas aeruginosa transposase for transposon Tn501 TnpA SWALL:TNP5_PSEAE (SWALL:P06695) (988 aa) fasta scores: E(): 6.2e-13, 48.71% id in 117 aa | genbank | 122 | 1893282 | 1893647 | ||
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 149634 | hypothetical | BPSS1385 | putative ATP/GTP binding protein No significant database matches | genbank | 52212826 | CAH38859.1 | 328 | 1893842 | 1894828 | |
| 149635 | pseudogene | pseudogene | BPSS1385A | transposase (fragment) Probable gene remnant. Similar to internal regions of Burkholderia cepacia putative transposase for insertion sequence element IS402 SWALL:T402_BURCE (SWALL:P24536) (211 aa) fasta scores: E(): 1.4e-05, 37.63% id in 93 aa, and to Alcaligenes eutrophus ISJp4 transposase TnpA SWALL:Q6UP96 (EMBL:AY365053) (262 aa) fasta scores: E(): 0.00013, 33.7% id in 89 aa | genbank | 107 | 1894962 | 1895282 | ||
| 149636 | hypothetical | BPSS1386 | putative ATP/GTP binding protein Poor database matches. Almost identical to the previously sequence Burkholderia pseudomallei hypothetical protein SWALL:Q93L05 (EMBL:AF074878) (1287 aa) fasta scores: E(): 0, 98.21% id in 1287 aa | genbank | 52212827 | CAH38861.1 | 1277 | 1895431 | 1899264 | |
| 149637 | hypothetical | BPSS1387 | conserved hypothetical protein Previously sequenced as Burkholderia pseudomallei hypothetical 17.9 kDa protein SWALL:Q93L04 (EMBL:AF074878) (161 aa) fasta scores: E(): 5e-66, 100% id in 161 aa. Similar to Sinorhizobium meliloti phage PBC5 hypothetical 17.1 kDa protein orf18 SWALL:Q8W6K9 (EMBL:AF448724) (150 aa) fasta scores: E(): 4.7e-13, 35.46% id in 141 aa | genbank | 52212828 | CAH38862.1 | 161 | 1899336 | 1899821 | |
| 149638 | hypothetical | BPSS1388 | putative membrane protein Similar to Burkholderia pseudomallei hypothetical 61.4 kDa protein SWALL:Q93L03 (EMBL:AF074878) (602 aa) fasta scores: E(): 7.5e-177, 99.5% id in 602 aa, and to C-terminus of Pseudomonas syringae HrpK SWALL:Q9L6W3 (EMBL:AF232004) (780 aa) fasta scores: E(): 2.8e-21, 30.3% id in 660 aa, and to C-terminus of Pseudomonas syringae HrpK SWALL:Q9L6V5 (EMBL:AF232005) (767 aa) fasta scores: E(): 6.6e-21, 29.83% id in 620 aa | genbank | 52212829 | CAH38863.1 | 602 | 1899846 | 1901654 | |
| 149639 | hypothetical | BPSS1389 | hypothetical protein No significant database matches | genbank | 52212830 | CAH38864.1 | 468 | 1901932 | 1903338 | |
| 149640 | sctC | hypothetical | BPSS1390 | putative type III secretion system protein Almost identical to the previously sequenced Burkholderia pseudomallei typeIII secretion-system associated protein SctC SWALL:Q93L02 (EMBL:AF074878) (588 aa) fasta scores: E(): 7.7e-207, 99.49% id in 588 aa. Similar to Ralstonia solanacearum hypersensitivity response secretion protein HrpA precursor HrpA or HrcC or rsp0874 or rs01645 SWALL:HRPA_RALSO (SWALL:Q52498) (568 aa) fasta scores: E(): 1.3e-84, 45.58% id in 577 aa, and to Burkholderia cepacia genomovar III BcsCC SWALL:Q8VP21 (EMBL:AY028431) (681 aa) fasta scores: E(): 2.9e-39, 37.1% id in 601 aa | genbank | 52212831 | CAH38865.1 | 588 | 1903732 | 1905498 |
| 149641 | hypothetical | BPSS1391 | putative AraC family regulator of pathogenicity genes Similar to Ralstonia solanacearum regulatory protein HrpB or rsp0873 or rs01644 SWALL:HRPB_RALSO (SWALL:P31778) (477 aa) fasta scores: E(): 5.6e-49, 34.35% id in 492 aa. Almost identical to the previously sequenced Burkholderia pseudomallei hypothetical 54.7 kDa protein SWALL:Q93L01 (EMBL:AF074878) (483 aa) fasta scores: E(): 4.9e-195, 99.58% id in 483 aa | genbank | 52212832 | CAH38866.1 | 483 | 1905540 | 1906991 | |
| 149642 | sctT | hypothetical | BPSS1392 | putative type III secretion-associated protein Similar to Xanthomonas campestris type III secretion associated protein Hrpb8 SWALL:Q56786 (EMBL:U33548) (276 aa) fasta scores: E(): 7.1e-46, 44.64% id in 271 aa. Identical to Burkholderia pseudomallei type III secretion-associated protein SctT SWALL:Q93L00 (EMBL:AF074878) (240 aa) fasta scores: E(): 6.7e-93, 100% id in 240 aa. Similar to Xanthomonas campestris HrpB8 protein HrcT or xcc1238 SWALL:AAM40536 (EMBL:AE012222) (276 aa) fasta scores: E(): 1.6e-46, 44.98% id in 269 aa | genbank | 52212833 | CAH38867.1 | 272 | 1907166 | 1907984 |
| 149643 | hypothetical | BPSS1393 | hypothetical protein Previously sequenced as Burkholderia pseudomallei ORF7 SWALL:Q93KZ9 (EMBL:AF074878) (168 aa) fasta scores: E(): 3.1e-52, 100% id in 168 aa | genbank | 52212834 | CAH38868.1 | 168 | 1907981 | 1908487 | |
| 149644 | sctN | hypothetical | BPSS1394 | putative type III secretion associated protein Almost identical to the previously sequenced Burkholderia pseudomallei type III secretion associated protein SctN SWALL:Q93KZ8 (EMBL:AF074878) (449 aa) fasta scores: E(): 8.6e-155, 99.77% id in 449 aa. Similar to Xanthomonas axonopodis HrcN protein or xac0412 SWALL:Q8PQB6 (EMBL:AE011666) (442 aa) fasta scores: E(): 1.2e-107, 70.48% id in 437 aa, and to Xanthomonas campestris probable ATP synthase HrpB6 SWALL:HRB6_XANCV (SWALL:P80153) (442 aa) fasta scores: E(): 3.6e-107, 70.48% id in 437 aa | genbank | 52212835 | CAH38869.1 | 449 | 1908508 | 1909857 |
| 149645 | sctL | hypothetical | BPSS1395 | putative type III secretion-associated protein Previously sequenced as Burkholderia pseudomallei type III secretion-associated protein SctL SWALL:Q93KZ7 (EMBL:AF074878) (289 aa) fasta scores: E(): 2.4e-103, 100% id in 289 aa. Similar to Ralstonia solanacearum protein HrpF or rsp0869 or rs01640 SWALL:Q8XRH8 (EMBL:AL646081) (301 aa) fasta scores: E(): 1.8e-15, 31.25% id in 288 aa, and to Xanthomonas axonopodis protein HrpB5 or xac0411 SWALL:AAM35302 (EMBL:AE011666) (233 aa) fasta scores: E(): 4.9e-15, 31.17% id in 247 aa | genbank | 52212836 | CAH38870.1 | 289 | 1909854 | 1910723 |
| 149646 | hypothetical | BPSS1396 | hypothetical protein Almost identical to the previously sequenced Burkholderia pseudomallei hypothetical 27.8 kDa protein SWALL:Q93KZ6 (EMBL:AF074878) (255 aa) fasta scores: E(): 7.5e-105, 99.6% id in 255 aa | genbank | 52212837 | CAH38871.1 | 255 | 1910708 | 1911475 | |
| 149647 | sctJ | hypothetical | BPSS1397 | putative type III secretion associated protein Almost identical to the previously sequenced Burkholderia pseudomallei type III secretion associated protein SctJ SWALL:Q93KZ5 (EMBL:AF074878) (274 aa) fasta scores: E(): 1e-101, 99.27% id in 274 aa. Similar to Xanthomonas campestris HrcJ protein or xcc1233 SWALL:AAM40531 (EMBL:AE012222) (254 aa) fasta scores: E(): 1.2e-44, 53.01% id in 249 aa, and to Ralstonia solanacearum Hrp conserved lipoprotein HrcJ transmembrane or rsp0867 or rs01638 SWALL:Q52492 (EMBL:AJ245811) (269 aa) fasta scores: E(): 3.1e-44, 52.29% id in 262 aa | genbank | 52212838 | CAH38872.1 | 274 | 1911490 | 1912314 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 149648 | hypothetical | BPSS1398 | hypothetical protein Previously sequenced as Burkholderia pseudomallei hypothetical 13.9 kDa protein SWALL:Q93KZ4 (EMBL:AF074878) (128 aa) fasta scores: E(): 1.4e-41, 100% id in 128 aa | genbank | 52212839 | CAH38873.1 | 128 | 1912352 | 1912738 | |
| 149649 | hypothetical | BPSS1399 | hypothetical protein Highly similar to the previously sequenced Burkholderia pseudomallei hypothetical 19.6 kDa protein SWALL:Q93KZ3 (EMBL:AF074878) (178 aa) fasta scores: E(): 2.4e-70, 98.87% id in 178 aa. N-terminus is similar to the N-terminal region of Ralstonia solanacearum HRPK protein rsp0865 or rs01636 SWALL:Q52490 (EMBL:AJ245811) (158 aa) fasta scores: E(): 2.2e-06, 29.36% id in 126 aa | genbank | 52212840 | CAH38874.1 | 189 | 1912775 | 1913344 | |
| 149650 | sctU | hypothetical | BPSS1400 | putative type III secretion-associated protein Almost identical to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctU SWALL:Q93KZ2 (EMBL:AF074878) (351 aa) fasta scores: E(): 5.4e-132, 99.14% id in 352 aa. Similar to Ralstonia solanacearum hypersensitivity response secretion protein HrcU or HrpN or rsp0864 or rs01635 SWALL:HRCU_RALSO (SWALL:P35652) (357 aa) fasta scores: E(): 2.8e-60, 50% id in 346 aa, and to Xanthomonas campestris HrcU homolog SWALL:Q9RBK8 (EMBL:AF160974) (357 aa) fasta scores: E(): 3e-57, 45.79% id in 345 aa | genbank | 52212841 | CAH38875.1 | 352 | 1913631 | 1914689 |
| 149651 | sctV | hypothetical | BPSS1401 | putative type III secretion-associated protein Almost identical to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctV SWALL:Q93KZ1 (EMBL:AF074878) (705 aa) fasta scores: E(): 0, 99.71% id in 705 aa. Similar to Pseudomonas glumae putative HrpO SWALL:Q9F1J5 (EMBL:AB053455) (698 aa) fasta scores: E(): 7.7e-193, 77.69% id in 704 aa | genbank | 52212842 | CAH38876.1 | 705 | 1914705 | 1916822 |
| 149652 | hypothetical | BPSS1402 | hypothetical protein Highly similar to the previously sequenced Burkholderia pseudomallei hypothetical 24.8 kDa protein SWALL:Q9ZGR2 (EMBL:AF074878) (227 aa) fasta scores: E(): 1.4e-73, 96.91% id in 227 aa | genbank | 52212843 | CAH38877.1 | 228 | 1916819 | 1917505 | |
| 149653 | sctQ | hypothetical | BPSS1403 | putative type III secretion-associated protein Similar to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctQ SWALL:Q9ZGR1 (EMBL:AF074878) (310 aa) fasta scores: E(): 4.2e-117, 98.06% id in 310 aa. Similar to Zea mays fdr3 SWALL:Q94KV5 (EMBL:AF262623) (355 aa) fasta scores: E(): 1.1e-16, 33.33% id in 315 aa, and to Ralstonia solanacearum protein HrpQ or HrcQ or rsp0861 or rs01632 SWALL:Q52489 (EMBL:AJ245811) (354 aa) fasta scores: E(): 1.8e-12, 29.09% id in 299 aa | genbank | 52212844 | CAH38878.1 | 310 | 1917874 | 1918806 |
| 149654 | sctR | hypothetical | BPSS1404 | putative type III secretion-associated protein Previously sequenced as Burkholderia pseudomallei type III secretion-associated protein SctR SWALL:Q9Z3E2 (EMBL:AF074878) (216 aa) fasta scores: E(): 3.2e-78, 100% id in 216 aa | genbank | 52212845 | CAH38879.1 | 216 | 1918790 | 1919440 |
| 149655 | sctS | hypothetical | BPSS1405 | putative type III secretion-associated protein Highly similar to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctS SWALL:Q9ZGR0 (EMBL:AF074878) (87 aa) fasta scores: E(): 3.7e-31, 98.85% id in 87 aa. Similar to Ralstonia solanacearum HrpU protein or HrcS or rsp0859 or rs01630 SWALL:Q52487 (EMBL:AJ245811) (86 aa) fasta scores: E(): 3.4e-14, 58.53% id in 82 aa, and to Xanthomonas oryzae pv. oryzicola HrcS SWALL:Q93MH8 (EMBL:AF404819) (86 aa) fasta scores: E(): 2e-13, 52.32% id in 86 aa | genbank | 52212846 | CAH38880.1 | 87 | 1919463 | 1919726 |
| 149656 | hypothetical | BPSS1406 | hypothetical protein Similar to the previously sequenced Burkholderia pseudomallei hypothetical 34.4 kDa protein SWALL:Q9ZGQ9 (EMBL:AF074878) (317 aa) fasta scores: E(): 6.1e-118, 97.8% id in 319 aa | genbank | 52212847 | CAH38881.1 | 319 | 1919731 | 1920690 | |
| 149657 | sctD | hypothetical | BPSS1407 | secretion-associated protein Highly similar to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctD SWALL:Q93KZ0 (EMBL:AF074878) (349 aa) fasta scores: E(): 1.7e-119, 98.28% id in 349 aa. Similar to Xanthomonas campestris HrpD5 protein or xcc1223 SWALL:Q8PBA0 (EMBL:AE012221) (315 aa) fasta scores: E(): 1e-09, 30.09% id in 329 aa | genbank | 52212848 | CAH38882.1 | 349 | 1920833 | 1921882 |
| 149658 | hypothetical | BPSS1408 | hypothetical protein Previously sequenced as Burkholderia pseudomallei hypothetical 8.8 kDa protein SWALL:Q93KY9 (EMBL:AF074878) (82 aa) fasta scores: E(): 7.3e-30, 100% id in 82 aa | genbank | 52212849 | CAH38883.1 | 82 | 1921937 | 1922185 | |
| 149659 | hypothetical | BPSS1409 | hypothetical protein No significant database matches | genbank | 52212850 | CAH38884.1 | 95 | 1922315 | 1922602 | |
| 149660 | hypothetical | BPSS1410 | conserved hypothetical protein Similar to Xanthomonas oryzae HpaB SWALL:Q9KW23 (EMBL:AB045311) (162 aa) fasta scores: E(): 7e-30, 52.86% id in 157 aa. Almost identical to the previously sequenced Burkholderia pseudomallei hypothetical 16.8 kDa protein SWALL:Q93KY8 (EMBL:AF074878) (151 aa) fasta scores: E(): 1.1e-61, 99.33% id in 151 aa | genbank | 52212851 | CAH38885.1 | 151 | 1922715 | 1923170 | |
| 149661 | hypothetical | BPSS1411 | hypothetical protein Previously sequenced as Burkholderia pseudomallei hypothetical 23.1 kDa protein SWALL:Q93KY7 (EMBL:AF074878) (218 aa) fasta scores: E(): 8e-79, 100% id in 218 aa. Weakly similar to Serratia entomophila SepC protein SWALL:Q9F9Z0 (EMBL:AF135182) (973 aa) fasta scores: E(): 5.3e-07, 29.94% id in 334 aa, and to Yersinia pestis insecticial toxin ypo2380 SWALL:Q8ZE10 (EMBL:AJ414152) (984 aa) fasta scores: E(): 7.7e-05, 31.45% id in 302 aa | genbank | 52212852 | CAH38886.1 | 371 | 1923507 | 1924622 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 149662 | hypothetical | BPSS1412 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc2672 or rs04533 SWALL:Q8XW03 (EMBL:AL646071) (159 aa) fasta scores: E(): 2.7e-13, 36.91% id in 149 aa, and to Rhizobium meliloti putative auxin-binding protein r01214 or smc01776 SWALL:Q92QU1 (EMBL:AL591786) (167 aa) fasta scores: E(): 1.7e-06, 36.36% id in 99 aa | genbank | 52212853 | CAH38887.1 | 160 | 1925049 | 1925531 | |
| 149663 | hypothetical | BPSS1413 | putative hydrolase protein Similar to Bradyrhizobium japonicum Bll1358 protein SWALL:BAC46623 (EMBL:AP005939) (271 aa) fasta scores: E(): 5.4e-28, 44.33% id in 203 aa, and to Xanthomonas axonopodis hydrolase xac3428 SWALL:Q8PH32 (EMBL:AE011989) (205 aa) fasta scores: E(): 4.7e-16, 36.31% id in 201 aa | genbank | 52212854 | CAH38888.1 | 204 | 1925626 | 1926240 | |
| 149664 | hypothetical | BPSS1414 | putative GntR family transcriptional regulator Similar to Rhodobacter capsulatus pyruvate dehydrogenase complex repressor PdhR SWALL:O33960 (EMBL:U78309) (257 aa) fasta scores: E(): 1.5e-12, 32.6% id in 230 aa, and to Rhizobium meliloti putative GntR-family transcriptional regulator ra0130 or sma0246 SWALL:Q930R5 (EMBL:AE007207) (233 aa) fasta scores: E(): 8.2e-21, 37% id in 227 aa, and to Agrobacterium tumefaciens transcriptional regulator, GntR family atu2740 or agr_c_4967 SWALL:Q8UBW0 (EMBL:AE009221) (238 aa) fasta scores: E(): 1.7e-20, 36.74% id in 215 aa | genbank | 52212855 | CAH38889.1 | 234 | 1926431 | 1927135 | |
| 149665 | hypothetical | BPSS1415 | putative dehydrogenase/oxidoreductase protein Similar to Salmonella typhimurium 3-hydroxyisobutyrate dehydrogenase YgbJ or stm2918 SWALL:Q8ZMG4 (EMBL:AE008833) (307 aa) fasta scores: E(): 2.5e-52, 58.07% id in 291 aa, and to Pasteurella multocida hypothetical protein Pm1366 SWALL:Q9CL76 (EMBL:AE006174) (301 aa) fasta scores: E(): 9.3e-52, 55.66% id in 300 aa, and to Brucella melitensis D-beta-hydroxybutyrate dehydrogenase bmeII1090 SWALL:Q8YB11 (EMBL:AE009741) (302 aa) fasta scores: E(): 2.4e-49, 55.4% id in 296 aa | genbank | 52212856 | CAH38890.1 | 296 | 1927214 | 1928104 | |
| 149666 | hypothetical | BPSS1416 | conserved hypothetical protein Similar to Pasteurella multocida hypothetical protein Pm1365 SWALL:Q9CL77 (EMBL:AE006174) (413 aa) fasta scores: E(): 4.4e-60, 48.96% id in 388 aa, and to Brucella melitensis hypothetical protein BmeII1091 SWALL:Q8YB10 (EMBL:AE009741) (436 aa) fasta scores: E(): 6.8e-60, 45.16% id in 465 aa, and to Rhizobium meliloti hypothetical protein rb1377 or smb20670 SWALL:Q92TW7 (EMBL:AL603646) (425 aa) fasta scores: E(): 8.9e-59, 48.34% id in 453 aa | genbank | 52212857 | CAH38891.1 | 467 | 1928115 | 1929518 | |
| 149667 | hypothetical | BPSS1417 | putative L-fuculose phosphate aldolase Similar to Escherichia coli, and Shigella flexneri L-fuculose phosphate aldolase FucA or FucC or prd or b2800 or sf2814 SWALL:FUCA_ECOLI (SWALL:P11550) (215 aa) fasta scores: E(): 3.6e-07, 28.35% id in 201 aa, and to Rhizobium meliloti putative aldolase, possibly L-fuculose-phosphate aldolase protein rb1373 or smb20666 SWALL:Q92TX1 (EMBL:AL603646) (225 aa) fasta scores: E(): 1.7e-34, 51.2% id in 207 aa, and to Brucella melitensis L-fuculose phosphate aldolase bmeII1095 SWALL:Q8YB06 (EMBL:AE009741) (224 aa) fasta scores: E(): 2.4e-29, 44.97% id in 209 aa | genbank | 52212858 | CAH38892.1 | 213 | 1929515 | 1930156 | |
| 149668 | hypothetical | BPSS1418 | putative transmembrane permease transporter Similar to Burkholderia cepacia phthalate transporter OphD SWALL:Q9RPP3 (EMBL:AF152094) (448 aa) fasta scores: E(): 3.2e-70, 42.61% id in 420 aa, and to Brucella melitensis putative tartrate transporter bmeii1096 SWALL:Q8YB05 (EMBL:AE009741) (451 aa) fasta scores: E(): 2e-112, 64.52% id in 420 aa, and to Ralstonia solanacearum probable permease transmembrane protein rsc2352 or rs01194 SWALL:Q8XWW8 (EMBL:AL646069) (442 aa) fasta scores: E(): 2.5e-106, 59.59% id in 443 aa | genbank | 52212859 | CAH38893.1 | 440 | 1930260 | 1931582 | |
| 149669 | hyi | hypothetical | BPSS1419 | putative hydroxypyruvate isomerase Similar to Escherichia coli hydroxypyruvate isomerase Hyi or Gip or b0508 SWALL:HYI_ECOLI (SWALL:P30147) (258 aa) fasta scores: E(): 3.6e-43, 43.96% id in 257 aa, and to Alcaligenes eutrophus hypothetical 28.3 kDa protein in Gbd 5'region SWALL:YGB4_ALCEU (SWALL:Q44015) (260 aa) fasta scores: E(): 4.8e-86, 79.45% id in 258 aa, and to Ralstonia solanacearum hypothetical protein rsc0020 or rs01842 SWALL:Q8Y3G0 (EMBL:AL646057) (262 aa) fasta scores: E(): 1.1e-77, 71.26% id in 254 aa | genbank | 52212860 | CAH38894.1 | 258 | 1931664 | 1932440 |
| 149670 | hypothetical | BPSS1420 | conserved hypothetical protein Similar to Alcaligenes eutrophus hypothetical 34.2 kDa protein in Gbd 5'region SWALL:Q44016 (EMBL:L36817) (324 aa) fasta scores: E(): 3.4e-76, 66.87% id in 320 aa, and to Yersinia pestis hypothetical protein ypo2238 or y2079 SWALL:Q8ZED6 (EMBL:AJ414151) (333 aa) fasta scores: E(): 9.1e-63, 55.03% id in 318 aa, and to Brucella melitensis 4-hydroxybutyrate dehydrogenase bmeII1094 SWALL:Q8YB07 (EMBL:AE009741) (321 aa) fasta scores: E(): 7.6e-59, 52.18% id in 320 aa | genbank | 52212861 | CAH38895.1 | 323 | 1932468 | 1933439 | |
| 149671 | hypothetical | BPSS1421 | conserved hypothetical protein Similar to Rhizobium loti hypothetical protein Mll1937 from codon 35 SWALL:Q98JH6 (EMBL:AP002998) (228 aa) fasta scores: E(): 9.7e-45, 50.66% id in 225 aa. Possible alternative start site at codon 34 | genbank | 52212862 | CAH38896.1 | 263 | 1934223 | 1935014 | |
| 149672 | hypothetical | BPSS1422 | putative membrane protein Similar to Ralstonia solanacearum putative aspartyl/asparaginyl beta-hydroxylase transmembrane protein rsc1877 or rs03437 SWALL:Q8XY86 (EMBL:AL646067) (300 aa) fasta scores: E(): 2.4e-77, 58.38% id in 298 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4512 SWALL:Q9HVQ9 (EMBL:AE004865) (299 aa) fasta scores: E(): 4.9e-75, 60.06% id in 298 aa, and to Xanthomonas campestris aspartyl/asparaginyl beta-hydroxylase AspH or xcc0382 SWALL:AAM39701 (EMBL:AE012134) (301 aa) fasta scores: E(): 8.8e-74, 57.71% id in 298 aa | genbank | 52212863 | CAH38897.1 | 299 | 1935909 | 1936808 | |
| 149673 | hypothetical | BPSS1423 | putative glycine betaine/L-proline-binding protein ABC transporter component Similar to Rhizobium meliloti glycine betaine/L-proline ABC transporter ProX SWALL:Q8RPR1 (EMBL:AF360731) (309 aa) fasta scores: E(): 7.1e-57, 52.24% id in 312 aa, and to Brucella suis glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein, putative br1579 SWALL:AAN30485 (EMBL:AE014452) (322 aa) fasta scores: E(): 6.3e-63, 55.84% id in 308 aa, and to Brucella melitensis glycine betaine/L-proline-binding protein ProX bmei0441 SWALL:Q8YIK3 (EMBL:AE009487) (326 aa) fasta scores: E(): 9.7e-63, 55.51% id in 308 aa | genbank | 52212864 | CAH38898.1 | 316 | 1937183 | 1938133 | |
| 149674 | hypothetical | BPSS1424 | putative AraC transcriptional regulatory protein Similar to Pseudomonas syringae arginine pathway regulatory protein ArgR SWALL:Q8VVB2 (EMBL:AF443787) (354 aa) fasta scores: E(): 4.9e-35, 40% id in 315 aa, and to Ralstonia solanacearum probable transcriptional regulator protein rsp0068 or rs02043 SWALL:Q8XTN8 (EMBL:AL646076) (334 aa) fasta scores: E(): 2.1e-97, 76.2% id in 332 aa, and to Ralstonia solanacearum probable transcriptional regulator protein rsp0054 or rs02029 SWALL:Q8XTQ2 (EMBL:AL646076) (343 aa) fasta scores: E(): 2.4e-67, 56.82% id in 315 aa | genbank | 52212865 | CAH38899.1 | 332 | 1938234 | 1939232 | |
| 149675 | hypothetical | BPSS1425 | putative glycine-betaine binding ABC transporter permease protein Similar to Lactococcus lactis glycine-betaine binding permease protein BusAB or OpuabC SWALL:Q9RQ05 (EMBL:AF139575) (573 aa) fasta scores: E(): 7e-47, 50.73% id in 272 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsp0067 or rs02042 SWALL:Q8XTN9 (EMBL:AL646076) (298 aa) fasta scores: E(): 1.7e-94, 84.84% id in 297 aa, and to Brucella melitensis glycine betaine/L-proline transport system permease protein ProW bmeii0549 SWALL:Q8YCH9 (EMBL:AE009690) (301 aa) fasta scores: E(): 6.5e-59, 58.82% id in 289 aa | genbank | 52212866 | CAH38900.1 | 300 | 1939355 | 1940257 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 149676 | hypothetical | BPSS1426 | putative glycine betaine/L-proline transport ATP-binding protein Similar to Salmonella typhimurium glycine betaine/L-proline transport ATP-binding protein ProV or stm2809 SWALL:PROV_SALTY (SWALL:P17328) (400 aa) fasta scores: E(): 2.3e-57, 46.73% id in 398 aa, and to Ralstonia solanacearum putative glycine betaine/L-proline ATP-binding ABC transporter protein OpuA or rsp0066 or rs02041 SWALL:Q8XTP0 (EMBL:AL646076) (385 aa) fasta scores: E(): 2.3e-106, 82.26% id in 389 aa, and to Brucella melitensis glycine betaine/L-proline transport ATP-binding protein ProV bmeii0548 SWALL:Q8YCI0 (EMBL:AE009690) (398 aa) fasta scores: E(): 4.7e-63, 50.51% id in 392 aa | genbank | 52212867 | CAH38901.1 | 389 | 1940250 | 1941419 | |
| 149677 | hypothetical | BPSS1427 | conserved hypothetical protein Similar to Streptomyces avermitilis putative NADPH-dependent fmn reductase SWALL:Q82GT3 (EMBL:AP005036) (203 aa) fasta scores: E(): 1e-28, 50.79% id in 189 aa | genbank | 52212868 | CAH38902.1 | 220 | 1942199 | 1942861 | |
| 149678 | hypothetical | BPSS1428 | hypothetical protein No significant database matches | genbank | 52212869 | CAH38903.1 | 71 | 1943447 | 1943662 | |
| 149679 | hypothetical | BPSS1429 | hypothetical protein No significant database matches | genbank | 52212870 | CAH38904.1 | 299 | 1943761 | 1944660 | |
| 149680 | hypothetical | BPSS1430 | ArsR family regulatory protein Similar to Thiobacillus ferrooxidans ArsR-like protein SWALL:Q9L9D2 (EMBL:AF173880) (118 aa) fasta scores: E(): 1.7e-11, 50.52% id in 95 aa, and to Ralstonia solanacearum putative arsenical resistance operon repressor transcription regulator protein ArsR or rsp1129 or rs05489 SWALL:Q8XQT9 (EMBL:AL646083) (107 aa) fasta scores: E(): 2.4e-17, 57.14% id in 105 aa, and to Caulobacter crescentus transcriptional regulator, ArsR family cc1505 SWALL:Q9A859 (EMBL:AE005825) (109 aa) fasta scores: E(): 5e-15, 51.57% id in 95 aa | genbank | 52212871 | CAH38905.1 | 111 | 1945122 | 1945457 | |
| 149681 | hypothetical | BPSS1431 | conserved hypothetical protein Similar to Mycobacterium tuberculosis hypothetical protein rv2641 or mt2719 or mtcy441.11 SWALL:YQ41_MYCTU (SWALL:P71940) (152 aa) fasta scores: E(): 9.6e-12, 36.12% id in 155 aa, and to Anabaena sp. hypothetical protein Alr1104 SWALL:Q8YXV5 (EMBL:AP003584) (150 aa) fasta scores: E(): 2.6e-11, 34.21% id in 152 aa | genbank | 52212872 | CAH38906.1 | 159 | 1945454 | 1945933 | |
| 149682 | hypothetical | BPSS1432 | putative arsenate reductase Similar to Thiobacillus ferrooxidans arsenate reductase ArsC SWALL:Q9L9D3 (EMBL:AF173880) (163 aa) fasta scores: E(): 1.1e-13, 37.83% id in 148 aa, and to Ralstonia solanacearum putative arsenate reductase ArsC or rsp1128 or rs05491 SWALL:Q8XQU0 (EMBL:AL646083) (164 aa) fasta scores: E(): 7.6e-52, 79.26% id in 164 aa, and to Rhodobacter capsulatus putative arsenate reductase SWALL:O68076 (EMBL:AF010496) (281 aa) fasta scores: E(): 5.2e-22, 45.57% id in 158 aa | genbank | 52212873 | CAH38907.1 | 164 | 1945968 | 1946462 | |
| 149683 | hypothetical | BPSS1433 | sodium bile acid symporter family protein Similar to Sinorhizobium sp. As4 arsenic resistance ArsB SWALL:Q9RA92 (EMBL:AF178758) (351 aa) fasta scores: E(): 5.8e-24, 30.65% id in 349 aa, and to Agrobacterium tumefaciens sodium bile acid symporter family protein atu1491 or agr_c_2750 SWALL:Q8UFA7 (EMBL:AE009108) (352 aa) fasta scores: E(): 8.7e-87, 71.04% id in 335 aa, and to Pasteurella multocida hypothetical protein Pm1943 SWALL:Q9CJQ1 (EMBL:AE006231) (338 aa) fasta scores: E(): 3.6e-64, 51.66% id in 331 aa | genbank | 52212874 | CAH38908.1 | 356 | 1946525 | 1947595 | |
| 149684 | hypothetical | BPSS1434 | putative membrane-anchored cell surface protein Similar to C-terminus of Streptococcus pneumoniae cell wall surface anchor family protein sp1772 SWALL:Q97P71 (EMBL:AE007470) (4776 aa) fasta scores: E(): 1.2e-132, 37.46% id in 2565 aa, and to C-terminus of Streptococcus cristatus SrpA SWALL:Q9KX33 (EMBL:U96166) (3381 aa) fasta scores: E(): 8.9e-115, 32.07% id in 2703 aa, and to C-terminus of Streptococcus gordonii streptococcal hemagglutinin Hsa SWALL:Q9KWR3 (EMBL:AB029393) (2178 aa) fasta scores: E(): 1.5e-88, 35.24% id in 2105 aa | genbank | 52212875 | CAH38909.1 | 2634 | 1948688 | 1956592 | |
| 149685 | hypothetical | BPSS1437 | putative lipoprotein No significant database matches | genbank | 52212876 | CAH38910.1 | 107 | 1956745 | 1957068 | |
| 149686 | hypothetical | BPSS1438 | hypothetical protein C-terminal region is similar to Ralstonia solanacearum hypothetical protein rsc3164 or rs00434 SWALL:Q8XUM3 (EMBL:AL646074) (387 aa) fasta scores: E(): 6e-30, 34.75% id in 374 aa, and Caulobacter crescentus protein FlbA or cc1457 SWALL:FLBA_CAUCR (SWALL:P21296) (596 aa) fasta scores: E(): 8.3e-11, 28.22% id in 613 aa | genbank | 52212877 | CAH38911.1 | 598 | 1957626 | 1959422 | |
| 149687 | hypothetical | BPSS1439 | putative membrane-anchored cell surface protein Similar to C-terminus of Staphylococcus epidermidis streptococcal hemagglutinin protein se2249 SWALL:AAO05891 (EMBL:AE016751) (2310 aa) fasta scores: E(): 1.8e-79, 40.67% id in 1480 aa, and to C-terminus of Streptococcus pneumoniae cell wall surface anchor family protein sp1772 SWALL:Q97P71 (EMBL:AE007470) (4776 aa) fasta scores: E(): 1.1e-73, 36.81% id in 1456 aa. Possible alternative translational start site | genbank | 52212878 | CAH38912.1 | 1530 | 1960277 | 1964869 | |
| 149688 | hypothetical | BPSS1442 | hypothetical protein No significant database matches | genbank | 52212879 | CAH38913.1 | 385 | 1964863 | 1966020 | |
| 149689 | hypothetical | BPSS1443 | hypothetical protein No significant database matches | genbank | 52212880 | CAH38914.1 | 374 | 1966066 | 1967190 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 149690 | hypothetical | BPSS1444 | hypothetical protein No significant database matches | genbank | 52212881 | CAH38915.1 | 393 | 1967536 | 1968717 | |
| 149691 | hypothetical | BPSS1445 | putative biotin carboxylase Similar to Mycobacterium tuberculosis acetyl-/propionyl-coenzyme A carboxylase alpha chain [includes: biotin carboxylase AccA1 or BccA or rv2501c or mt2576 or mtcy07a7.07C] SWALL:BCCA_MYCTU (SWALL:P46401) (654 aa) fasta scores: E(): 1.3e-95, 47.81% id in 663 aa, and to Xanthomonas campestris biotin carboxylase AccC or xcc0244 SWALL:AAM39563 (EMBL:AE012120) (675 aa) fasta scores: E(): 6e-133, 58.04% id in 665 aa, and to Xanthomonas axonopodis biotin carboxylase AccC or xac0263 SWALL:AAM35155 (EMBL:AE011651) (675 aa) fasta scores: E(): 2e-128, 57.31% id in 663 aa | genbank | 52212882 | CAH38916.1 | 664 | 1968819 | 1970813 | |
| 149692 | hypothetical | BPSS1446 | putative enoyl coenzyme A hydratase-like protein Similar to Paracoccus pantotrophus enoyl coenzyme A hydratase-like protein SWALL:Q9EYZ0 (EMBL:AF308446) (266 aa) fasta scores: E(): 6.6e-24, 39.76% id in 254 aa, and to Ralstonia solanacearum putative enoyl-coA hydratase protein rsc0267 or rs03234 SWALL:Q8Y2R8 (EMBL:AL646058) (264 aa) fasta scores: E(): 2.8e-61, 65.75% id in 257 aa, and to Pseudomonas aeruginosa probable enoyl-coA hydratase/isomerase pa2013 SWALL:Q9I298 (EMBL:AE004627) (265 aa) fasta scores: E(): 6.1e-41, 46.71% id in 259 aa | genbank | 52212883 | CAH38917.1 | 261 | 1970974 | 1971759 | |
| 149693 | hypothetical | BPSS1447 | putative biotin-dependent carboxyl transferase Similar to Homo sapiens methylcrotonyl-coA carboxylase beta chain, mitochondrial precursor MccC2 or MccB SWALL:MCCB_HUMAN (SWALL:Q9HCC0) (563 aa) fasta scores: E(): 1e-140, 66.09% id in 522 aa, and to Ralstonia solanacearum putative propionyl-coA carboxylase rsc0269 or rs03236 SWALL:Q8Y2R6 (EMBL:AL646058) (535 aa) fasta scores: E(): 4.7e-179, 81.86% id in 535 aa, and to Agrobacterium tumefaciens 3-methylcrotonoyl-coA carboxylase beta subunit MccB or atu3478 or agr_l_2706 SWALL:Q8UA96 (EMBL:AE009278) (537 aa) fasta scores: E(): 4.4e-164, 75.37% id in 532 aa | genbank | 52212884 | CAH38918.1 | 535 | 1971780 | 1973387 | |
| 149694 | hypothetical | BPSS1448 | putative acyl-coA dehydrogenase Similar to Solanum tuberosum isovaleryl-coA dehydrogenase 2, mitochondrial precursor Ivd2 SWALL:Q9FS87 (EMBL:AJ278988) (401 aa) fasta scores: E(): 2.1e-97, 65.54% id in 386 aa, and to Ralstonia solanacearum probable acyl-coA dehydrogenase oxidoreductase protein rsc0279 or rs03246 SWALL:Q8Y2Q6 (EMBL:AL646058) (393 aa) fasta scores: E(): 8e-131, 82.9% id in 392 aa, and to Xanthomonas campestris acyl-coA dehydrogenase AcdA or xcc0246 SWALL:AAM39565 (EMBL:AE012121) (387 aa) fasta scores: E(): 2.3e-112, 71.86% id in 391 aa | genbank | 52212885 | CAH38919.1 | 393 | 1973410 | 1974591 | |
| 149695 | hypothetical | BPSS1449 | putative TetR family transcriptional regulator Similar to Bacillus subtilis hypothetical protein YsiA SWALL:P94548 (EMBL:Z75208) (194 aa) fasta scores: E(): 4.3e-10, 21.87% id in 192 aa, and to Bacillus cereus transcriptional regulator, TetR family SWALL:Q72ZL6 (EMBL:AE017278) (195 aa) fasta scores: E(): 3.4e-08, 24.06% id in 187 aa. CDS is extended at the N- and C-termini in comparison to similar proteins. Possible pseudogene | genbank | 52212886 | CAH38920.1 | 254 | 1974799 | 1975563 | |
| 149696 | pseudogene | pseudogene | BPSS1449a | conserved hypothetical protein (fragment) Probable gene remnant. Similar to the C-terminal regions of Bordetella pertussis hypothetical protein SWALL:Q7VSI5 (EMBL:BX640412) (134 aa) fasta scores: E(): 5.8e-16, 66.26% id in 83 aa, and to Bordetella parapertussis hypothetical protein SWALL:Q7WC61 (EMBL:BX640424) (134 aa) fasta scores: E(): 5.8e-16, 67.47% id in 83 aa | genbank | 58 | 1975585 | 1975758 | ||
| 149697 | pseudogene | pseudogene | BPSS1450 | putative nitric oxide reductase (pseudogene) Similar to Alcaligenes eutrophus nitric oxide reductase NorZ SWALL:O30375 (EMBL:AF002661) (762 aa) fasta scores: E(): 2.7e-60, 35% id in 757 aa, and to Alcaligenes eutrophus nitric oxide reductase SWALL:O30368 (EMBL:AF002217) (762 aa) fasta scores: E(): 6.7e-52, 34.93% id in 770 aa. CDS contains a frameshift mutation after codon 222 | genbank | 550 | 1977170 | 1978822 | ||
| 149698 | hypothetical | BPSS1452 | putative copper nitrite reductase protein Similar to Neisseria gonorrhoeae major outer membrane protein Pan 1 precursor AniA SWALL:ANIA_NEIGO (SWALL:Q02219) (392 aa) fasta scores: E(): 7.9e-20, 31.92% id in 379 aa, and to Hyphomicrobium denitrificans nitrite reductase precursor NirK SWALL:Q8KKH4 (EMBL:AB076606) (486 aa) fasta scores: E(): 1.8e-20, 29.76% id in 467 aa. CDS is extended at the C-terminus in comparison to similar proteins | genbank | 52212887 | CAH38923.1 | 487 | 1978963 | 1980426 | |
| 149699 | hypothetical | BPSS1453 | putative bifunctional protein Possible gene fusion. N-terminus is similar to Rhodococcus sp. I24 nidA dioxygenase large subunit NidA SWALL:Q9X593 (EMBL:AF121905) (468 aa) fasta scores: E(): 7.4e-07, 32.74% id in 113 aa. C-terminus is similar to Vibrio alginolyticus carboxynorspermidine decarboxylase NspC SWALL:Q56575 (EMBL:D31783) (377 aa) fasta scores: E(): 6.9e-33, 30.37% id in 372 aa | genbank | 52212888 | CAH38924.1 | 1092 | 1980962 | 1984240 | |
| 149700 | hypothetical | BPSS1454 | hypothetical protein C-terminal region is similar to Anabaena sp. hypothetical protein Alr0786 SWALL:Q8YYR0 (EMBL:AP003583) (344 aa) fasta scores: E(): 3.2e-29, 34.19% id in 348 aa, and Synechocystis sp. hypothetical protein Slr1287 SWALL:P74202 (EMBL:D90913) (336 aa) fasta scores: E(): 1.1e-24, 34.22% id in 336 aa. Possible alternative translational start site | genbank | 52212889 | CAH38925.1 | 454 | 1984227 | 1985591 | |
| 149701 | hypothetical | BPSS1455 | hypothetical protein Weakly similar to internal regions of Homo sapiens hypothetical protein Kiaa0585 SWALL:Q9Y4E2 (EMBL:AB011157) (416 aa) fasta scores: E(): 3.4e-14, 29.88% id in 261 aa, and Mus musculus apoptotic cell clearance receptor Ptdserr PtdsR SWALL:Q9ERI5 (EMBL:AF304118) (403 aa) fasta scores: E(): 4.5e-14, 29.5% id in 261 aa | genbank | 52212890 | CAH38926.1 | 263 | 1985593 | 1986384 | |
| 149702 | hypothetical | BPSS1456 | putative exported protein No significant database matches | genbank | 52212891 | CAH38927.1 | 206 | 1986772 | 1987392 | |
| 149703 | hypothetical | BPSS1457 | conserved hypothetical protein Similar to Caulobacter crescentus hypothetical protein Cc1198 SWALL:Q9A8Z7 (EMBL:AE005797) (331 aa) fasta scores: E(): 4.5e-83, 62.23% id in 331 aa, and to Campylobacter jejuni hypothetical protein Cj0554 SWALL:Q9PHW0 (EMBL:AL139075) (334 aa) fasta scores: E(): 2.4e-64, 48.77% id in 326 aa, and to Streptomyces coelicolor hypothetical protein sco0437 or scf51a.15C SWALL:Q9RL49 (EMBL:AL939105) (341 aa) fasta scores: E(): 1e-54, 48.94% id in 331 aa | genbank | 52212892 | CAH38928.1 | 337 | 1987533 | 1988546 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 149704 | hypothetical | BPSS1458 | putative MFS family transport protein Similar to Comamonas testosteroni transporter PmdK SWALL:Q93PT0 (EMBL:AF305325) (465 aa) fasta scores: E(): 1e-16, 26.15% id in 455 aa, and to Xanthomonas campestris MFS transporter xcc1685 SWALL:AAM40979 (EMBL:AE012270) (468 aa) fasta scores: E(): 2.2e-83, 50.98% id in 459 aa, and to Xanthomonas axonopodis MFS transporter xac1705 SWALL:AAM36572 (EMBL:AE011802) (474 aa) fasta scores: E(): 4.2e-78, 49.56% id in 462 aa | genbank | 52212893 | CAH38929.1 | 472 | 1989047 | 1990465 | |
| 149705 | hypothetical | BPSS1459 | putative acetyltransferase protein Similar to Saccharomyces cerevisiae hypothetical 27.4 kDa protein in Hyr1 3'region yir042C SWALL:YIW2_YEAST (SWALL:P40586) (236 aa) fasta scores: E(): 8e-44, 51.94% id in 231 aa, and to Yersinia pestis hypothetical 27.4 kDa protein ypo1955 or y2355 SWALL:Q9ZC61 (EMBL:AL031866) (299 aa) fasta scores: E(): 1e-40, 46.48% id in 256 aa | genbank | 52212894 | CAH38930.1 | 260 | 1990568 | 1991350 | |
| 149706 | hypothetical | BPSS1460 | putative two-component sensor kinase Similar to Pseudomonas sp. JR1 two-component sensor ArmS SWALL:Q9KJZ1 (EMBL:AF155506) (440 aa) fasta scores: E(): 7.1e-18, 32.31% id in 359 aa, and to Brucella melitensis two-component system sensor bmeII1015 SWALL:Q8YB85 (EMBL:AE009734) (447 aa) fasta scores: E(): 7.6e-71, 51.03% id in 437 aa, and to Agrobacterium tumefaciens two component sensor kinase atu4018 or agr_l_1672 SWALL:Q8U8S2 (EMBL:AE009332) (445 aa) fasta scores: E(): 2.3e-46, 37.69% id in 443 aa | genbank | 52212895 | CAH38931.1 | 453 | 1991964 | 1993325 | |
| 149707 | hypothetical | BPSS1461 | putative two-component response regulator Similar to Pseudomonas sp. JR1 response regulator ArmR SWALL:Q9KJZ2 (EMBL:AF155506) (227 aa) fasta scores: E(): 6.5e-32, 45.37% id in 216 aa, and to Brucella melitensis two component response regulator bmIIi1014 SWALL:Q8YB86 (EMBL:AE009734) (225 aa) fasta scores: E(): 2.6e-52, 67.13% id in 216 aa, and to Agrobacterium tumefaciens two component response regulator atu4019 or agr_l_1670 SWALL:Q8U8S1 (EMBL:AE009332) (217 aa) fasta scores: E(): 4.5e-40, 52.99% id in 217 aa | genbank | 52212896 | CAH38932.1 | 219 | 1993328 | 1993987 | |
| 149708 | hypothetical | BPSS1462 | conserved hypothetical protein Similar to Brucella melitensis hypothetical cytosolic protein BmeII1013 SWALL:Q8YB87 (EMBL:AE009734) (111 aa) fasta scores: E(): 4.9e-14, 43.22% id in 118 aa, and to Brucella melitensis hypothetical cytosolic protein Bmei0390 SWALL:Q8YIQ3 (EMBL:AE009481) (87 aa) fasta scores: E(): 0.00027, 37.34% id in 83 aa | genbank | 52212897 | CAH38933.1 | 118 | 1994219 | 1994575 | |
| 149709 | hypothetical | BPSS1463 | putative exported protein Similar to Brucella melitensis hypothetical protein Bmeii1012 SWALL:Q8YB88 (EMBL:AE009733) (156 aa) fasta scores: E(): 3.9e-31, 57.41% id in 155 aa | genbank | 52212898 | CAH38934.1 | 155 | 1995364 | 1995831 | |
| 149710 | hypothetical | BPSS1464 | putative transmembrane NADPH flavoprotein Similar to Brucella melitensis sulfite reductase bmeii1011 SWALL:Q8YB89 (EMBL:AE009733) (733 aa) fasta scores: E(): 3.7e-34, 44.75% id in 782 aa, and to Caulobacter crescentus sulfite reductase cc3063 SWALL:Q9A3Y7 (EMBL:AE005969) (504 aa) fasta scores: E(): 9.1e-17, 31.37% id in 510 aa | genbank | 52212899 | CAH38935.1 | 779 | 1995853 | 1998192 | |
| 149711 | hypothetical | BPSS1465 | putative thiamine biosynthesis lipoprotein precursor Similar to Escherichia coli, and Escherichia coli O157:H7 thiamine biosynthesis lipoprotein ApbE precursor apbE SWALL:APBE_ECOLI (SWALL:P33944) (351 aa) fasta scores: E(): 8.5e-19, 28.42% id in 380 aa, and to Brucella melitensis thiamine biosynthesis lipoprotein ApbE precursor SWALL:Q8YB90 (EMBL:AE009733) (325 aa) fasta scores: E(): 2.2e-34, 42.64% id in 394 aa. CDS contains additional internal residues in comparison to orthologues | genbank | 52212900 | CAH38936.1 | 409 | 1998173 | 1999402 | |
| 149712 | hypothetical | BPSS1466 | putative aldehyde dehydrogenase family protein Similar to Streptomyces clavuligerus semialdehyde dehydrogenase Pcd SWALL:O85725 (EMBL:AF073895) (512 aa) fasta scores: E(): 2e-120, 66.05% id in 492 aa, and to Ralstonia solanacearum putative transmembrane aldehyde dehydrogenase oxidoreductase protein rsp1591 or rs02148 SWALL:Q8XPP7 (EMBL:AL646085) (504 aa) fasta scores: E(): 9.4e-134, 69.84% id in 504 aa, and to Rhizobium loti aldehyde dehydrogenase mll2867 SWALL:Q98HH4 (EMBL:AP003000) (504 aa) fasta scores: E(): 4.1e-132, 68.93% id in 499 aa | genbank | 52212901 | CAH38937.1 | 503 | 1999417 | 2000928 | |
| 149713 | hypothetical | BPSS1467 | putative aminotransferase protein Similar to Streptomyces coelicolor putative aminotransferase sco3306 or sce68.04C SWALL:Q9WX27 (EMBL:AL939116) (404 aa) fasta scores: E(): 1.2e-64, 50.5% id in 400 aa, and to Ralstonia solanacearum putative aminotransferase protein rsc0229 or rs00661 SWALL:Q8Y2V3 (EMBL:AL646058) (402 aa) fasta scores: E(): 1e-56, 47.08% id in 395 aa, and to Pyrococcus abyssi aminotransferase pab2227 SWALL:Q9V282 (EMBL:AJ248283) (410 aa) fasta scores: E(): 3.6e-53, 39.54% id in 397 aa | genbank | 52212902 | CAH38938.1 | 408 | 2001096 | 2002322 | |
| 149714 | hypothetical | BPSS1468 | hypothetical protein C-terminal region is similar to Anabaena sp. hypothetical protein Alr2404 alr2404 SWALL:Q8YUE6 (EMBL:AP003589) (313 aa) fasta scores: E(): 1.2e-08, 26.86% id in 309 aa. Possible alternative translation start sites | genbank | 52212903 | CAH38939.1 | 339 | 2002377 | 2003396 | |
| 149715 | hypothetical | BPSS1469 | putative LysR family transcriptional regulator Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 4.1e-31, 38.77% id in 294 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1593 or rs02150 SWALL:Q8XPP5 (EMBL:AL646085) (296 aa) fasta scores: E(): 5.1e-60, 55.89% id in 297 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0448 SWALL:Q9I670 (EMBL:AE004482) (302 aa) fasta scores: E(): 1.4e-54, 53% id in 300 aa | genbank | 52212904 | CAH38940.1 | 302 | 2003571 | 2004479 | |
| 149716 | hypothetical | BPSS1469a | hypothetical protein N-terminal region is similar to Ralstonia solanacearum hypothetical protein RSC0264 SWALL:Q8Y2S1 (EMBL:AL646058) (99 aa) fasta scores: E(): 1.6e-06, 47.72% id in 88 aa. CDS contains an alanine rich region towards the C-terminus | genbank | 52212905 | CAH38941.1 | 162 | 2004540 | 2005028 | |
| 149717 | hypothetical | BPSS1470 | putative FAD-binding oxidoreductase Similar to Escherichia coli probable oxidoreductase OrdL or b1301 SWALL:ORDL_ECOLI (SWALL:P37906) (426 aa) fasta scores: E(): 9.2e-41, 37.43% id in 390 aa, and to Rhizobium meliloti putative oxidoreductase protein ordl3 or r02961 or smc03132 SWALL:Q92LR9 (EMBL:AL591792) (426 aa) fasta scores: E(): 1.7e-56, 42.99% id in 414 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2776 pa2776 SWALL:Q9I067 (EMBL:AE004705) (427 aa) fasta scores: E(): 1.6e-46, 39% id in 423 aa | genbank | 52212906 | CAH38942.1 | 433 | 2005276 | 2006577 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 149718 | hypothetical | BPSS1471 | TetR family transcriptional regulator Similar to Ralstonia solanacearum putative transcription regulator protein rsp1395 or rs02063 SWALL:Q8XQ91 (EMBL:AL646084) (224 aa) fasta scores: E(): 2.7e-40, 53.15% id in 222 aa, and to Rhizobium meliloti hypothetical transcriptional regulator protein smb20033 rb0036 or smb20033 SWALL:Q92XC6 (EMBL:AL603642) (220 aa) fasta scores: E(): 1.1e-39, 55.02% id in 209 aa. Possible alternative translation start site after codon 8. | genbank | 52212907 | CAH38943.1 | 232 | 2006630 | 2007328 |