proteins
| 37 proteins |
T | COG0271 | Stress-induced morphogen (activity unknown) | Help | |
|---|---|---|---|---|---|
| 2 from | query genome Sinorhizobium meliloti (Rhizobiales | Alphaproteobacteria) | ||||
| SMc00487 SMc00698 | ||||
93 letters (r) 0
0 431 = ||| 1 SMc00698 (93) = 0
-43
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= SMc00698
(93 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
SMc00698 170 5e-43
mlr3565 110 5e-25
BMEI0045 107 6e-24
AGl2404 72 2e-13
SPBC16E9.06c 67 7e-12
VC2296 63 2e-10
CC3011 60 9e-10
PM1324 58 3e-09
ECs0489 57 7e-09
ZbolA 57 7e-09
bolA 57 7e-09
YPO3160 57 1e-08
RP245 56 1e-08
STM0446 55 2e-08
RC0329 55 3e-08
XF2450 54 6e-08
RSc1745 52 3e-07
NMA2143 47 1e-05
CC2503 46 1e-05
NMB0344 46 2e-05
HI0163 45 3e-05
YAL044w-a 42 2e-04
SPCC4B3.11c 42 3e-04
ssr3122 40 0.001
PA0857 39 0.002
NMA0256 39 0.002
NMB0009 39 0.002
AGc3395 39 0.003
msl0055 37 0.007
BMEI1128 37 0.010
SMc00487 36 0.013
YGL220w 33 0.15
BU473 32 0.27
RC1254 31 0.41
STM3308 31 0.53
YAL046c 30 0.68
ECs4069 30 0.69
ZyrbA 30 0.69
yrbA 30 0.69
RP812 30 0.92
asr0798 30 0.98
RSc2954 30 1.3
slr0689 30 1.3
MA1683 29 1.6
SPAC8C9.11 29 1.9
APE0080 29 2.3
SMc00152 29 2.4
SA0227 28 5.0
VNG1357C 27 5.8
# >SMc00698
# Length = 93
#
# Score = 170 bits (431), Expect = 5e-43
# Identities = 93/93 (100%), Positives = 93/93 (100%)
#
# Query: 1 MSLQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVA 60
# MSLQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVA
# Sbjct: 1 MSLQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVA 60
#
# Query: 61 RHRAINDLLKPELDAGLHALAVEPAAPGEATRW 93
# RHRAINDLLKPELDAGLHALAVEPAAPGEATRW
# Sbjct: 61 RHRAINDLLKPELDAGLHALAVEPAAPGEATRW 93
#
#
# >mlr3565
# Length = 100
#
# Score = 110 bits (276), Expect = 5e-25
# Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 7/100 (7%)
#
# Query: 1 MSLQRRIEEKLTQAFHPERLMVINES-------DQHAGHQPEFDGGGETHMRVRIVSSAF 53
# MS+Q +E+KL +AF PERL++INES + H +DG GETH RVR+VSSAF
# Sbjct: 1 MSIQATMEDKLNKAFSPERLVIINESHLHAGHHHHGSDHHGGYDGTGETHFRVRVVSSAF 60
#
# Query: 54 TGMSRVARHRAINDLLKPELDAGLHALAVEPAAPGEATRW 93
# GMSR+ RHRA+N+LL EL AG+HALA+EP+APGE TRW
# Sbjct: 61 AGMSRIDRHRAVNELLADELKAGVHALAIEPSAPGEKTRW 100
#
#
# >BMEI0045
# Length = 102
#
# Score = 107 bits (267), Expect = 6e-24
# Identities = 63/98 (64%), Positives = 74/98 (75%), Gaps = 7/98 (7%)
#
# Query: 2 SLQRRIEEKLTQAFHPERLMVINESDQHAGHQPE-------FDGGGETHMRVRIVSSAFT 54
# S Q +E KLT AF PE+L VINES HAGH + +DG GETH R+RIV+ AFT
# Sbjct: 4 SKQSSMEAKLTAAFAPEKLEVINESRLHAGHHRDGGHEDDTYDGAGETHFRIRIVAEAFT 63
#
# Query: 55 GMSRVARHRAINDLLKPELDAGLHALAVEPAAPGEATR 92
# GMSRV RHRAINDLLK EL++G+HALA+EP+APGEA R
# Sbjct: 64 GMSRVQRHRAINDLLKEELESGVHALALEPSAPGEAAR 101
#
#
# >AGl2404
# Length = 50
#
# Score = 72.0 bits (175), Expect = 2e-13
# Identities = 38/50 (76%), Positives = 44/50 (88%)
#
# Query: 44 MRVRIVSSAFTGMSRVARHRAINDLLKPELDAGLHALAVEPAAPGEATRW 93
# MRV+IVS +F+G SR+ RHRAIN LLKPELDAGLHALA+E AAPGE TR+
# Sbjct: 1 MRVQIVSESFSGKSRIERHRAINALLKPELDAGLHALAIEAAAPGEPTRF 50
#
#
# >SPBC16E9.06c
# Length = 102
#
# Score = 67.0 bits (162), Expect = 7e-12
# Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
#
# Query: 1 MSLQRRIEEKLTQAFHPERLMVINESDQHAGH--QPEFDGGGETHMRVRIVSSAFTGMSR 58
# M Q RI + L++A +++ + N+S +H+ H ETH R+ IVS F+GMSR
# Sbjct: 9 MGRQDRIYKTLSEALKTDKITLYNDSYKHSHHIAMKGVPDTNETHFRLEIVSPEFSGMSR 68
#
# Query: 59 VARHRAINDLLKPELDAGLHALAV 82
# VARHR + LLK E D GLHAL +
# Sbjct: 69 VARHRLVYGLLKDEFDGGLHALQI 92
#
#
# >VC2296
# Length = 106
#
# Score = 62.8 bits (151), Expect = 2e-10
# Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
#
# Query: 3 LQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARH 62
# +Q IE+KL+ F PE L VINESD H G E+H +V +VS F G+ VARH
# Sbjct: 2 IQDVIEKKLSDEFQPEFLKVINESDMH-----NVPRGSESHFKVTVVSERFAGLRPVARH 56
#
# Query: 63 RAINDLLKPELDAGLHALAV 82
# R +N L EL +HALA+
# Sbjct: 57 RLVNQTLADELANHIHALAI 76
#
#
# >CC3011
# Length = 91
#
# Score = 60.1 bits (144), Expect = 9e-10
# Identities = 36/84 (42%), Positives = 50/84 (58%), Gaps = 1/84 (1%)
#
# Query: 7 IEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARHRAIN 66
# I KL AF P L ++++SD+H GH G GE+H +RI S AF G +RV R R +
# Sbjct: 9 IRRKLEAAFSPSALELVDDSDRHHGHAGH-TGAGESHFNLRIESQAFAGKTRVMRQRMVM 67
#
# Query: 67 DLLKPELDAGLHALAVEPAAPGEA 90
# L EL +HAL++ +APG+A
# Sbjct: 68 HALAEELAGPVHALSIHASAPGDA 91
#
#
# >PM1324
# Length = 103
#
# Score = 58.2 bits (139), Expect = 3e-09
# Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
#
# Query: 1 MSLQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVA 60
# MS Q+ + +LT+AF P L+V NES H+ + G +H ++ +VS F G+S+VA
# Sbjct: 1 MSKQQELITRLTEAFEPHFLVVENESHMHSSGR-----GANSHFKIVLVSERFDGLSKVA 55
#
# Query: 61 RHRAINDLLKPELDAGLHALAV 82
# RHR + L +L G+HALA+
# Sbjct: 56 RHRQLYQFLADDLAQGIHALAL 77
#
#
# >ECs0489
# Length = 116
#
# Score = 57.0 bits (136), Expect = 7e-09
# Identities = 35/82 (42%), Positives = 46/82 (55%), Gaps = 5/82 (6%)
#
# Query: 1 MSLQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVA 60
# M ++ RIEEKL AF P L V++ES +H G E+H +V +VS FTG +
# Sbjct: 12 MMIRERIEEKLRAAFQPVFLEVVDESYRH-----NVPAGSESHFKVVLVSDRFTGERFLN 66
#
# Query: 61 RHRAINDLLKPELDAGLHALAV 82
# RHR I L EL +HALA+
# Sbjct: 67 RHRMIYSTLAEELSTTVHALAL 88
#
#
# >ZbolA
# Length = 116
#
# Score = 57.0 bits (136), Expect = 7e-09
# Identities = 35/82 (42%), Positives = 46/82 (55%), Gaps = 5/82 (6%)
#
# Query: 1 MSLQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVA 60
# M ++ RIEEKL AF P L V++ES +H G E+H +V +VS FTG +
# Sbjct: 12 MMIRERIEEKLRAAFQPVFLEVVDESYRH-----NVPAGSESHFKVVLVSDRFTGERFLN 66
#
# Query: 61 RHRAINDLLKPELDAGLHALAV 82
# RHR I L EL +HALA+
# Sbjct: 67 RHRMIYSTLAEELSTTVHALAL 88
#
#
# >bolA
# Length = 116
#
# Score = 57.0 bits (136), Expect = 7e-09
# Identities = 35/82 (42%), Positives = 46/82 (55%), Gaps = 5/82 (6%)
#
# Query: 1 MSLQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVA 60
# M ++ RIEEKL AF P L V++ES +H G E+H +V +VS FTG +
# Sbjct: 12 MMIRERIEEKLRAAFQPVFLEVVDESYRH-----NVPAGSESHFKVVLVSDRFTGERFLN 66
#
# Query: 61 RHRAINDLLKPELDAGLHALAV 82
# RHR I L EL +HALA+
# Sbjct: 67 RHRMIYSTLAEELSTTVHALAL 88
#
#
# >YPO3160
# Length = 106
#
# Score = 56.6 bits (135), Expect = 1e-08
# Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
#
# Query: 3 LQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARH 62
# ++ +IEEKL AF P+ L VINES +H G E+H ++ IVS F ++RH
# Sbjct: 4 IREQIEEKLKAAFVPDHLEVINESYRH-----NVPAGSESHFKIVIVSDKFQDQRFLSRH 58
#
# Query: 63 RAINDLLKPELDAGLHALAV 82
# R+I +L EL +HALA+
# Sbjct: 59 RSIYSVLADELAGSVHALAL 78
#
#
# >RP245
# Length = 80
#
# Score = 56.2 bits (134), Expect = 1e-08
# Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
#
# Query: 6 RIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARHRAI 65
# RI+EKL+ P +I+ES +H H +D G +H+++RI + G S +A HR I
# Sbjct: 6 RIQEKLS-VLKPHFQEIIDESYKHTNH---YD-GTYSHIKIRISAETLQGQSLIAHHRTI 60
#
# Query: 66 NDLLKPELDAGLHALAVE 83
# N+LL E ++GLHAL++E
# Sbjct: 61 NNLLADEFNSGLHALSIE 78
#
#
# >STM0446
# Length = 105
#
# Score = 55.5 bits (132), Expect = 2e-08
# Identities = 34/82 (41%), Positives = 46/82 (55%), Gaps = 5/82 (6%)
#
# Query: 1 MSLQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVA 60
# M ++ +IEEKL AF P L V++ES +H G E+H +V +VS FTG +
# Sbjct: 1 MMIREQIEEKLRTAFDPVFLEVVDESYRH-----NVPAGSESHFKVVLVSDRFTGERFLN 55
#
# Query: 61 RHRAINDLLKPELDAGLHALAV 82
# RHR I L EL +HALA+
# Sbjct: 56 RHRMIYGTLTAELSTTVHALAL 77
#
#
# >RC0329
# Length = 80
#
# Score = 55.1 bits (131), Expect = 3e-08
# Identities = 31/77 (40%), Positives = 47/77 (60%), Gaps = 5/77 (6%)
#
# Query: 7 IEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARHRAIN 66
# I+EKL+ P +I+ES +HA H G +H+++RI + G S +A HR IN
# Sbjct: 7 IQEKLS-VLKPHFQEIIDESYKHASHY----NGIHSHIKIRISAETLQGKSLIANHRTIN 61
#
# Query: 67 DLLKPELDAGLHALAVE 83
# +LL E ++GLHAL++E
# Sbjct: 62 NLLADEFNSGLHALSIE 78
#
#
# >XF2450
# Length = 96
#
# Score = 53.9 bits (128), Expect = 6e-08
# Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
#
# Query: 6 RIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARHRAI 65
# +I+ L AF P RL V +ESD+H GH DG G H V IV+ F G + +ARHRA+
# Sbjct: 12 QIQIVLGDAFAPSRLEVKDESDRHIGHSGARDGRG--HFSVLIVTPMFAGKTLLARHRAV 69
#
# Query: 66 NDLLKPELDAGLHALAVE 83
# L ++ +HAL+++
# Sbjct: 70 YAALGSMMETDIHALSIQ 87
#
#
# >RSc1745
# Length = 94
#
# Score = 51.6 bits (122), Expect = 3e-07
# Identities = 37/89 (41%), Positives = 45/89 (49%), Gaps = 2/89 (2%)
#
# Query: 3 LQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARH 62
# ++R IE L +AF P L V E D G H V IVS+AF G SRVARH
# Sbjct: 8 MRREIERLLREAFQPIHLAV--EDDSARHAGHAGAASGGGHYNVDIVSAAFAGKSRVARH 65
#
# Query: 63 RAINDLLKPELDAGLHALAVEPAAPGEAT 91
# R + D L+ A +HALA+ P E T
# Sbjct: 66 RMVYDALRTLWPAAIHALAIRAVTPEENT 94
#
#
# >NMA2143
# Length = 92
#
# Score = 46.6 bits (109), Expect = 1e-05
# Identities = 33/84 (39%), Positives = 43/84 (50%), Gaps = 5/84 (5%)
#
# Query: 7 IEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARHRAIN 66
# I E+L Q P L + +ES H GH GG H V +VS F G+SR+ R + +
# Sbjct: 7 IRERL-QTLDPLVLEIGDESHLHKGHAGNTGGG---HYAVLVVSGRFEGVSRLNRQKTVK 62
#
# Query: 67 DLLKPELDAG-LHALAVEPAAPGE 89
# LLK G +HAL + AAP E
# Sbjct: 63 SLLKDLFSDGIIHALGIRAAAPDE 86
#
#
# >CC2503
# Length = 98
#
# Score = 46.2 bits (108), Expect = 1e-05
# Identities = 25/51 (49%), Positives = 31/51 (60%)
#
# Query: 39 GGETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDAGLHALAVEPAAPGE 89
# G H + RIVS AF G+ RV +H+ +N L L LHALA+E AAP E
# Sbjct: 48 GDNDHWKARIVSPAFKGLPRVRQHQLVNRALADVLGGTLHALALETAAPAE 98
#
#
# >NMB0344
# Length = 92
#
# Score = 45.8 bits (107), Expect = 2e-05
# Identities = 32/84 (38%), Positives = 42/84 (49%), Gaps = 5/84 (5%)
#
# Query: 7 IEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARHRAIN 66
# I E+L Q P L + +ES H GH GG H V +VS F G+SR+ R + +
# Sbjct: 7 IRERL-QTLDPLVLEIGDESHLHKGHAGNTGGG---HYAVLVVSGRFEGVSRLNRQKTVK 62
#
# Query: 67 DLLKPELDAGL-HALAVEPAAPGE 89
# LLK G+ HAL + A P E
# Sbjct: 63 SLLKDLFSGGMIHALGIRAATPDE 86
#
#
# >HI0163
# Length = 103
#
# Score = 45.1 bits (105), Expect = 3e-05
# Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
#
# Query: 1 MSLQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVA 60
# MS+Q+ IE+K+ + F P L + NES H ++ G E+H + IVS+ F + +V
# Sbjct: 1 MSIQQIIEQKIQKEFQPHFLAIENESHLHHSNR-----GSESHFKCVIVSADFKNIRKVQ 55
#
# Query: 61 RHRAINDLLKPELDAGLHALAVEPAAPGE 89
# RH+ I LL EL+ +HALA+ P E
# Sbjct: 56 RHQRIYQLLNEELNHSIHALALHLFTPEE 84
#
#
# >YAL044w-a
# Length = 110
#
# Score = 42.4 bits (98), Expect = 2e-04
# Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
#
# Query: 24 NESDQHAGHQP-EFDGGGETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDA--GLHAL 80
# N+S +H GH + + ETH R+ +VS F G+ RHR + LL+ E+ G+HAL
# Sbjct: 36 NDSHKHKGHAGVQGNVSAETHFRIEMVSKKFEGLKLPQRHRMVYSLLQDEMAQANGIHAL 95
#
# Query: 81 AVEPAAPGE 89
# + P E
# Sbjct: 96 QLSLKTPQE 104
#
#
# >SPCC4B3.11c
# Length = 116
#
# Score = 42.0 bits (97), Expect = 3e-04
# Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 12/77 (15%)
#
# Query: 4 QRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARHR 63
# +RRI++ LT+ P L VI+ S GG + +V I S AF G + +A+HR
# Sbjct: 33 ERRIKDILTEKLSPSSLRVIDVS-----------GGCGSMYQVAIKSKAFQGKNTLAQHR 81
#
# Query: 64 AINDLLKPELDAGLHAL 80
# +N +LK E+ +H L
# Sbjct: 82 LVNSILKEEI-RNMHGL 97
#
#
# >ssr3122
# Length = 85
#
# Score = 39.7 bits (91), Expect = 0.001
# Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
#
# Query: 37 DGGGETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDA-GLHALAVEPAAP 87
# D GG H+ +VSSAFTG SRV +H+ + LK L + +HALA++ P
# Sbjct: 24 DLGGGDHLEAVVVSSAFTGQSRVKQHQMVYGALKDALASEAIHALALKTFTP 75
#
#
# >PA0857
# Length = 101
#
# Score = 39.3 bits (90), Expect = 0.002
# Identities = 31/89 (34%), Positives = 46/89 (50%), Gaps = 9/89 (10%)
#
# Query: 1 MSLQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVA 60
# MS++ RI+ L Q P+ + V++ES H+ G ETH +V +VS F G++ V
# Sbjct: 1 MSMRDRIQTAL-QPLDPQHVEVLDESHMHS-------RGLETHFKVVLVSPQFAGLNAVK 52
#
# Query: 61 RHRAINDLLKPELDAGLHALAVEPAAPGE 89
# RH+ + L L HALA+ P E
# Sbjct: 53 RHQKVYATLG-GLMGEFHALALHTFTPEE 80
#
#
# >NMA0256
# Length = 82
#
# Score = 39.3 bits (90), Expect = 0.002
# Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
#
# Query: 35 EFDGGGETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDAG-LHALAVEPAA 86
# E +G G H IVSS F G +R+ARHR I D LK +L++ LHAL++ AA
# Sbjct: 21 EVEGDGH-HFFAVIVSSEFEGKARLARHRLIKDGLKAQLESNELHALSISVAA 72
#
#
# >NMB0009
# Length = 82
#
# Score = 38.9 bits (89), Expect = 0.002
# Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
#
# Query: 35 EFDGGGETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDAG-LHALAVEPAA 86
# E +G G H IVSS F G +R+ARHR I D LK +L++ LHAL++ AA
# Sbjct: 21 EVEGDGH-HFFAVIVSSEFEGKARLARHRLIKDGLKAQLESNELHALSISVAA 72
#
#
# >AGc3395
# Length = 87
#
# Score = 38.5 bits (88), Expect = 0.003
# Identities = 19/49 (38%), Positives = 29/49 (58%)
#
# Query: 39 GGETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDAGLHALAVEPAAP 87
# G H +V+ AF G +RV +H+ + D LK + LHALA++ +AP
# Sbjct: 38 GDGDHYAAEVVAEAFKGKTRVQQHQMVYDALKGNMGGVLHALALQTSAP 86
#
#
# >msl0055
# Length = 77
#
# Score = 37.4 bits (85), Expect = 0.007
# Identities = 18/49 (36%), Positives = 28/49 (56%)
#
# Query: 39 GGETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDAGLHALAVEPAAP 87
# G H +V+ +F G SRV +H+ + D LK + LHALA++ + P
# Sbjct: 28 GDGDHYAAEVVAESFRGKSRVQQHQMVYDALKGNMGGVLHALALQTSVP 76
#
#
# >BMEI1128
# Length = 77
#
# Score = 36.6 bits (83), Expect = 0.010
# Identities = 18/49 (36%), Positives = 28/49 (56%)
#
# Query: 39 GGETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDAGLHALAVEPAAP 87
# G H +V+ +F G SRV +H+ + D LK + LHALA++ + P
# Sbjct: 28 GDGDHFAAEVVAESFRGKSRVQQHQMVYDALKGNMGGVLHALALQTSVP 76
#
#
# >SMc00487
# Length = 77
#
# Score = 36.2 bits (82), Expect = 0.013
# Identities = 18/49 (36%), Positives = 29/49 (58%)
#
# Query: 39 GGETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDAGLHALAVEPAAP 87
# G H +V+ AF G +RV +H+ + + LK + LHALA++ +AP
# Sbjct: 28 GDGDHYAAEVVAEAFRGKTRVQQHQMVYNALKGNMGGILHALALQTSAP 76
#
#
# >YGL220w
# Length = 120
#
# Score = 32.7 bits (73), Expect = 0.15
# Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
#
# Query: 3 LQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARH 62
# L+ RIE + Q +H I +D G FD + +VS F G S++ R
# Sbjct: 43 LRERIESAIPQVYH------IIVTDLSYGCGQSFD--------IVVVSDFFQGKSKLMRS 88
#
# Query: 63 RAINDLLKPELDAGLHALA 81
# RA+N +K EL +HA +
# Sbjct: 89 RAVNKAVKEELQE-IHAFS 106
#
#
# >BU473
# Length = 104
#
# Score = 32.0 bits (71), Expect = 0.27
# Identities = 17/77 (22%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
#
# Query: 6 RIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARHRAI 65
# +I++ L + + + + ++S H + G TH+R+ I+S F + + RHR I
# Sbjct: 5 KIKKYLISKINIKFIEIYDDSQFH-----HYSKKGLTHLRIIIISDDFINQTLINRHRII 59
#
# Query: 66 NDLLKPELDAGLHALAV 82
# +L ++ +++L +
# Sbjct: 60 FSMLSKMIEKKIYSLTL 76
#
#
# >RC1254
# Length = 79
#
# Score = 31.2 bits (69), Expect = 0.41
# Identities = 14/51 (27%), Positives = 27/51 (52%)
#
# Query: 39 GGETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDAGLHALAVEPAAPGE 89
# G + H + I F G+S + +H+ + ++L L+ LHA+ ++ A E
# Sbjct: 28 GDQDHYALEISDVQFNGLSLINQHKLVKNVLSEILNKKLHAITIKTIAVPE 78
#
#
# >STM3308
# Length = 97
#
# Score = 30.8 bits (68), Expect = 0.53
# Identities = 17/55 (30%), Positives = 29/55 (51%), Gaps = 1/55 (1%)
#
# Query: 39 GGETHMRVRIVSSAFTGMSRVARHRAI-NDLLKPELDAGLHALAVEPAAPGEATR 92
# G +H +V V F GMSRV + + + L++ D +HA++++ P E R
# Sbjct: 36 GDGSHFQVIAVGEMFDGMSRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAEWAR 90
#
#
# >YAL046c
# Length = 118
#
# Score = 30.4 bits (67), Expect = 0.68
# Identities = 18/70 (25%), Positives = 33/70 (46%), Gaps = 11/70 (15%)
#
# Query: 4 QRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARHR 63
# ++ I +KL Q PE V + S GG + + I S F G+S + +H+
# Sbjct: 39 EKMITDKLQQELEPEVCKVQDVS-----------GGCGSMFAINITSKKFNGLSLIKQHQ 87
#
# Query: 64 AINDLLKPEL 73
# +N +L+ ++
# Sbjct: 88 LVNRILRDDI 97
#
#
# >ECs4069
# Length = 89
#
# Score = 30.4 bits (67), Expect = 0.69
# Identities = 17/55 (30%), Positives = 29/55 (51%), Gaps = 1/55 (1%)
#
# Query: 39 GGETHMRVRIVSSAFTGMSRVARHRAI-NDLLKPELDAGLHALAVEPAAPGEATR 92
# G +H +V V F GMSRV + + + L++ D +HA++++ P E R
# Sbjct: 28 GDGSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAEWAR 82
#
#
# >ZyrbA
# Length = 89
#
# Score = 30.4 bits (67), Expect = 0.69
# Identities = 17/55 (30%), Positives = 29/55 (51%), Gaps = 1/55 (1%)
#
# Query: 39 GGETHMRVRIVSSAFTGMSRVARHRAI-NDLLKPELDAGLHALAVEPAAPGEATR 92
# G +H +V V F GMSRV + + + L++ D +HA++++ P E R
# Sbjct: 28 GDGSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAEWAR 82
#
#
# >yrbA
# Length = 89
#
# Score = 30.4 bits (67), Expect = 0.69
# Identities = 17/55 (30%), Positives = 29/55 (51%), Gaps = 1/55 (1%)
#
# Query: 39 GGETHMRVRIVSSAFTGMSRVARHRAI-NDLLKPELDAGLHALAVEPAAPGEATR 92
# G +H +V V F GMSRV + + + L++ D +HA++++ P E R
# Sbjct: 28 GDGSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAEWAR 82
#
#
# >RP812
# Length = 77
#
# Score = 30.0 bits (66), Expect = 0.92
# Identities = 11/45 (24%), Positives = 26/45 (57%)
#
# Query: 39 GGETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDAGLHALAVE 83
# G + H + I + F G+S + +H+ + + L L+ LH+++++
# Sbjct: 28 GDQDHYALEISDAQFNGLSLINQHKLVKNALSEILNKKLHSISIK 72
#
#
# >asr0798
# Length = 80
#
# Score = 30.0 bits (66), Expect = 0.98
# Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
#
# Query: 39 GGETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDA-GLHALAVEPAAP 87
# GG H +V +VSS F G V +H+ + L+ + +HALA++ P
# Sbjct: 27 GGGDHYQVTVVSSQFAGKRLVQQHQLVYGALRQAMSTEAIHALALKTYTP 76
#
#
# >RSc2954
# Length = 78
#
# Score = 29.6 bits (65), Expect = 1.3
# Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
#
# Query: 17 PERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDAG 76
# PE++ E+ H E +G G+ H IVS+ F G + RH+ + L + A
# Sbjct: 5 PEQIKQYIEAGLPCEHL-EVEGDGQ-HFFATIVSAQFEGKRLIQRHQLVYAALGDRMRAE 62
#
# Query: 77 LHALAVEPAAPGE 89
# +HAL+++ P E
# Sbjct: 63 IHALSMKTLTPAE 75
#
#
# >slr0689
# Length = 398
#
# Score = 29.6 bits (65), Expect = 1.3
# Identities = 15/32 (46%), Positives = 20/32 (61%), Gaps = 1/32 (3%)
#
# Query: 56 MSRVARHRAINDLLKPELDAGLHALAVEPAAP 87
# ++ +AR R + + LK LDAG AL EP AP
# Sbjct: 350 LASIARSREVAETLKAWLDAGTFAL-TEPVAP 380
#
#
# >MA1683
# Length = 234
#
# Score = 29.3 bits (64), Expect = 1.6
# Identities = 16/39 (41%), Positives = 20/39 (51%)
#
# Query: 12 TQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVS 50
# T A HPE + I+ +DQ GGG H R +IVS
# Sbjct: 78 TLAQHPELDLAIDGADQIDSELRAIKGGGAAHTREKIVS 116
#
#
# >SPAC8C9.11
# Length = 80
#
# Score = 29.3 bits (64), Expect = 1.9
# Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
#
# Query: 35 EFDGGGETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDAGLHA 79
# + GG + V IVS F G S +ARHR +N L+ E+ +HA
# Sbjct: 24 DMSGGCGQNFEVIIVSPLFEGKSTLARHRLVNHKLQ-EVIKDIHA 67
#
#
# >APE0080
# Length = 694
#
# Score = 28.9 bits (63), Expect = 2.3
# Identities = 21/81 (25%), Positives = 38/81 (45%), Gaps = 3/81 (3%)
#
# Query: 3 LQRRIEEKLTQAFHPERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARH 62
# L+ R +E + + L++I+E+ Q P+ GG E R V+S + M+R+ R
# Sbjct: 548 LRMRQDEWARRRVSKQLLIIIDEAHQFF---PQERGGYEEQEASRQVASMISSMARLGRA 604
#
# Query: 63 RAINDLLKPELDAGLHALAVE 83
# R I + LH + ++
# Sbjct: 605 RGIGFVFSTHSPNDLHDIILQ 625
#
#
# >SMc00152
# Length = 231
#
# Score = 28.9 bits (63), Expect = 2.4
# Identities = 18/53 (33%), Positives = 28/53 (51%)
#
# Query: 17 PERLMVINESDQHAGHQPEFDGGGETHMRVRIVSSAFTGMSRVARHRAINDLL 69
# PE + I+ +D+ G GGG +R +IV+SA T M +A + D+L
# Sbjct: 76 PELDLTIDGADEVDGKLRLIKGGGGALLREKIVASASTRMIVIADESKVVDVL 128
#
#
# >SA0227
# Length = 520
#
# Score = 27.7 bits (60), Expect = 5.0
# Identities = 17/53 (32%), Positives = 26/53 (48%), Gaps = 1/53 (1%)
#
# Query: 17 PERLMVINESDQHA-GHQPEFDGGGETHMRVRIVSSAFTGMSRVARHRAINDL 68
# P+ L I +D H+ G P+ D E M R++ S T S+ A+ ND+
# Sbjct: 47 PKDLTFILANDIHSLGAAPDLDDFIERRMIKRVIMSILTASSKTAQAMKNNDI 99
#
#
# >VNG1357C
# Length = 82
#
# Score = 27.3 bits (59), Expect = 5.8
# Identities = 14/40 (35%), Positives = 22/40 (55%)
#
# Query: 41 ETHMRVRIVSSAFTGMSRVARHRAINDLLKPELDAGLHAL 80
# + H+ +VS AF G+S V +H + D L + +HAL
# Sbjct: 31 DDHLEAVVVSPAFEGVSLVDQHDMVYDALGDAMTTEIHAL 70
#
#
Database: myva
Posted date: Sep 16, 2002 2:25 PM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.319 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,558,232
Number of Sequences: 192987
Number of extensions: 373243
Number of successful extensions: 880
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 822
Number of HSP's gapped (non-prelim): 59
length of query: 93
length of database: 59,019,183
effective HSP length: 69
effective length of query: 24
effective length of database: 45,703,080
effective search space: 1096873920
effective search space used: 1096873920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
S2: 58 (26.9 bits)