BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SSA_1110
(184 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|125717938|ref|YP_001035071.1| hypothetical protein SSA_1... 306 3e-82
gi|157074993|gb|ABV09676.1| acetyltransferase, GNAT family ... 254 2e-66
gi|157075457|gb|ABV10140.1| conserved hypothetical protein ... 246 5e-64
gi|125718121|ref|YP_001035254.1| hypothetical protein SSA_1... 244 2e-63
gi|126699654|ref|YP_001088551.1| putative acetyltransferase... 108 2e-22
gi|125624004|ref|YP_001032487.1| hypothetical protein llmg_... 98 2e-19
gi|15673277|ref|NP_267451.1| hypothetical protein L130023 [... 97 4e-19
gi|148544783|ref|YP_001272153.1| GCN5-related N-acetyltrans... 96 7e-19
gi|92089308|ref|ZP_01274256.1| GCN5-related N-acetyltransfe... 96 1e-18
gi|116512146|ref|YP_809362.1| Acetyltransferase (GNAT) fami... 92 2e-17
gi|116629149|ref|YP_814321.1| Acetyltransferase (GNAT) fami... 81 2e-14
gi|90961013|ref|YP_534929.1| hypothetical protein LSL_0023 ... 81 2e-14
gi|24379299|ref|NP_721254.1| hypothetical protein SMU.844 [... 80 8e-14
gi|109899048|ref|YP_662303.1| hypothetical protein Patl_273... 79 1e-13
gi|148544543|ref|YP_001271913.1| GCN5-related N-acetyltrans... 76 8e-13
gi|153815901|ref|ZP_01968569.1| hypothetical protein RUMTOR... 76 8e-13
gi|154509606|ref|ZP_02045248.1| hypothetical protein ACTODO... 75 1e-12
gi|156868661|gb|EDO62033.1| hypothetical protein CLOLEP_008... 75 2e-12
gi|29376076|ref|NP_815230.1| hypothetical protein EF1509 [E... 75 2e-12
gi|86604272|gb|ABD13914.1| putative acetyltransferase [Lact... 71 3e-11
gi|42518625|ref|NP_964555.1| hypothetical protein LJ0703 [L... 71 3e-11
gi|58336883|ref|YP_193468.1| putative acetyltransferase [La... 70 5e-11
gi|153812140|ref|ZP_01964808.1| hypothetical protein RUMOBE... 65 2e-09
gi|116619094|ref|YP_819465.1| Acetyltransferase (GNAT) fami... 61 3e-08
gi|55822390|ref|YP_140831.1| hypothetical protein, truncate... 59 1e-07
gi|154491794|ref|ZP_02031420.1| hypothetical protein PARMER... 56 1e-06
gi|150016820|ref|YP_001309074.1| hypothetical protein Cbei_... 55 2e-06
gi|29347461|ref|NP_810964.1| hypothetical protein BT_2051 [... 53 7e-06
>gi|125717938|ref|YP_001035071.1| hypothetical protein SSA_1110 [Streptococcus sanguinis SK36]
gi|125497855|gb|ABN44521.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 184
Score = 306 bits (785), Expect = 3e-82, Method: Composition-based stats.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF 60
MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF
Sbjct: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF 60
Query: 61 AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFYQKTMVLEVERVDEECDNLEQRQ 120
AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFYQKTMVLEVERVDEECDNLEQRQ
Sbjct: 61 AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFYQKTMVLEVERVDEECDNLEQRQ 120
Query: 121 ARMDFYKRNGFRTTNAFLEYEGLSFEILYLGHHFDEEAYRDIFHMLQEKNFFEFEIKYRR 180
ARMDFYKRNGFRTTNAFLEYEGLSFEILYLGHHFDEEAYRDIFHMLQEKNFFEFEIKYRR
Sbjct: 121 ARMDFYKRNGFRTTNAFLEYEGLSFEILYLGHHFDEEAYRDIFHMLQEKNFFEFEIKYRR 180
Query: 181 FSDV 184
FSDV
Sbjct: 181 FSDV 184
>gi|157074993|gb|ABV09676.1| acetyltransferase, GNAT family [Streptococcus gordonii str. Challis
substr. CH1]
Length = 184
Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats.
Identities = 145/183 (79%), Positives = 167/183 (91%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF 60
MSLTSQ+IT FPDLDKVE LN EAFPEEER+P++EFLRYT+++ +HFFAFYNEEEFVGF
Sbjct: 1 MSLTSQLITETFPDLDKVERLNTEAFPEEERIPLSEFLRYTDNDDAHFFAFYNEEEFVGF 60
Query: 61 AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFYQKTMVLEVERVDEECDNLEQRQ 120
AFA+ N K FYVSFFAIMPHLRSHGYG EII KL EFYQ+TM+LEVER+DEECDN+EQR+
Sbjct: 61 AFAISNAKAFYVSFFAIMPHLRSHGYGQEIIEKLVEFYQRTMLLEVERLDEECDNIEQRR 120
Query: 121 ARMDFYKRNGFRTTNAFLEYEGLSFEILYLGHHFDEEAYRDIFHMLQEKNFFEFEIKYRR 180
ARMDFYKRNGF+++NAFLEY+ LSFEILYLG HFDEEAYRDIFH LQ +N+F+F I+YRR
Sbjct: 121 ARMDFYKRNGFKSSNAFLEYDDLSFEILYLGDHFDEEAYRDIFHKLQAENYFDFRIEYRR 180
Query: 181 FSD 183
FSD
Sbjct: 181 FSD 183
>gi|157075457|gb|ABV10140.1| conserved hypothetical protein [Streptococcus gordonii str. Challis
substr. CH1]
Length = 184
Score = 246 bits (627), Expect = 5e-64, Method: Composition-based stats.
Identities = 140/183 (76%), Positives = 161/183 (87%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF 60
MSLTSQIITA+FPDLDKVEALN EAFPEEER+P +EFLRY E ++FFAFY+E+EFVGF
Sbjct: 1 MSLTSQIITADFPDLDKVEALNNEAFPEEERIPPSEFLRYEEQEDANFFAFYHEKEFVGF 60
Query: 61 AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFYQKTMVLEVERVDEECDNLEQRQ 120
AFA+ N + FYVSFFAIMPHLRSHGYGGEII KL FYQ+TM+LE+ER+DE CDN+EQRQ
Sbjct: 61 AFAISNAQAFYVSFFAIMPHLRSHGYGGEIIEKLVNFYQQTMILEIERLDEPCDNIEQRQ 120
Query: 121 ARMDFYKRNGFRTTNAFLEYEGLSFEILYLGHHFDEEAYRDIFHMLQEKNFFEFEIKYRR 180
AR DFY GFR++NAFLEY+ LSFEILY G FDEEAYRDIFH LQE+N+F+FEIK+RR
Sbjct: 121 ARWDFYHSKGFRSSNAFLEYDDLSFEILYRGGSFDEEAYRDIFHRLQEENYFDFEIKHRR 180
Query: 181 FSD 183
FSD
Sbjct: 181 FSD 183
>gi|125718121|ref|YP_001035254.1| hypothetical protein SSA_1305 [Streptococcus sanguinis SK36]
gi|125498038|gb|ABN44704.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 184
Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats.
Identities = 139/183 (75%), Positives = 160/183 (87%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF 60
MSLTSQIITA+FPDLDKVEALN EAFPEEER+P++EFLRY E ++FFAFY+E+EFVGF
Sbjct: 1 MSLTSQIITADFPDLDKVEALNNEAFPEEERIPLSEFLRYEEQEDANFFAFYHEKEFVGF 60
Query: 61 AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFYQKTMVLEVERVDEECDNLEQRQ 120
AFA+ N + FYVSFFAIMPHLRSHGYGGEII KL FYQ+TM+LE+ER+DE CDNL QRQ
Sbjct: 61 AFAISNSQAFYVSFFAIMPHLRSHGYGGEIIEKLVNFYQRTMILEIERLDEPCDNLAQRQ 120
Query: 121 ARMDFYKRNGFRTTNAFLEYEGLSFEILYLGHHFDEEAYRDIFHMLQEKNFFEFEIKYRR 180
AR DFY GFR+ NAFLEYE LSFEILY G+ FDEEAYRDIF +QE+N+F+FEIK+RR
Sbjct: 121 ARWDFYHSKGFRSANAFLEYEDLSFEILYRGNSFDEEAYRDIFRRIQEENYFDFEIKHRR 180
Query: 181 FSD 183
FSD
Sbjct: 181 FSD 183
>gi|126699654|ref|YP_001088551.1| putative acetyltransferase [Clostridium difficile 630]
gi|115251091|emb|CAJ68922.1| putative acetyltransferase [Clostridium difficile 630]
Length = 179
Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats.
Identities = 63/168 (37%), Positives = 96/168 (57%), Gaps = 1/168 (0%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF 60
MSLT Q +T+ F DL+K E LN EAFP+EER+ I E L ++ A Y++++F+GF
Sbjct: 1 MSLTIQKVTSYFKDLEKFEELNNEAFPDEERMSIQEMLNLVQSKKIEVSALYDKQQFIGF 60
Query: 61 AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFYQK-TMVLEVERVDEECDNLEQR 119
V + Y+ F AI P RS GYGG+ + + + Y +VL++E +++ NL+QR
Sbjct: 61 YVLVIENHIGYILFLAISPEQRSKGYGGKALSLMKKQYPNCQIVLDMETIEDSAPNLQQR 120
Query: 120 QARMDFYKRNGFRTTNAFLEYEGLSFEILYLGHHFDEEAYRDIFHMLQ 167
R FY +NGF T +EY+GL E+L F + + + L+
Sbjct: 121 ILRKQFYLQNGFYETEYLMEYKGLEMEVLCNQKTFQKNEFETLLKNLK 168
>gi|125624004|ref|YP_001032487.1| hypothetical protein llmg_1174 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124492812|emb|CAL97767.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
Length = 181
Score = 97.8 bits (242), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/167 (32%), Positives = 94/167 (56%), Gaps = 1/167 (0%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF 60
M+L + ++ P+ +V L + +FP+EE+ PI + + +F+A+Y +EF G
Sbjct: 1 MNLEIKNVSKTLPEYHQVIDLVKNSFPKEEQYPIWLLKLWALKKNVYFWAYYQYDEFCGI 60
Query: 61 AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFYQ-KTMVLEVERVDEECDNLEQR 119
++ V +E+M +V + A+ ++S GYG I+ L E +Q K + L +ER+D E DN EQR
Sbjct: 61 SYLVSHEEMIFVLYLAVNNQVQSKGYGSAILETLKEKFQDKNITLNIERLDPEADNYEQR 120
Query: 120 QARMDFYKRNGFRTTNAFLEYEGLSFEILYLGHHFDEEAYRDIFHML 166
R+ FY++NGF T+ + G +F L F EA++ + L
Sbjct: 121 VKRLKFYQKNGFYDTDYTITDRGETFLTLTTSQSFSVEAFKKVLREL 167
>gi|15673277|ref|NP_267451.1| hypothetical protein L130023 [Lactococcus lactis subsp. lactis
Il1403]
gi|12724272|gb|AAK05393.1|AE006361_9 UNKNOWN PROTEIN [Lactococcus lactis subsp. lactis Il1403]
Length = 181
Score = 97.1 bits (240), Expect = 4e-19, Method: Composition-based stats.
Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 1/167 (0%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF 60
M+L + ++ P+ +V L + +FP+EE+ PI + + HF+A+Y +EF G
Sbjct: 1 MNLEIKNVSKTLPEYRQVIDLVKNSFPKEEQYPIWLLKLWALKKNVHFWAYYQNDEFCGV 60
Query: 61 AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTE-FYQKTMVLEVERVDEECDNLEQR 119
++ V +E+M +V + A+ ++S GYG I+ L E F K + L +ER+D DN EQR
Sbjct: 61 SYLVSHEEMTFVLYLAVNNQVQSKGYGSAILETLKEKFSGKNITLNIERLDPSADNYEQR 120
Query: 120 QARMDFYKRNGFRTTNAFLEYEGLSFEILYLGHHFDEEAYRDIFHML 166
R+ FYK+NGF T+ + G +F L F E ++ + L
Sbjct: 121 VKRLKFYKKNGFYDTDYTITDRGETFLTLTTSPFFSVEVFKKVLREL 167
>gi|148544783|ref|YP_001272153.1| GCN5-related N-acetyltransferase [Lactobacillus reuteri F275]
gi|148531817|gb|ABQ83816.1| GCN5-related N-acetyltransferase [Lactobacillus reuteri F275]
Length = 176
Score = 96.3 bits (238), Expect = 7e-19, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 87/149 (58%), Gaps = 1/149 (0%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF 60
M L Q + + +V+ L AFP+ ER P L + +R+ F FY++E+FVGF
Sbjct: 1 MDLDIQPVRLSLKEYKQVKQLYMRAFPKYEREPWTWLLIKSKYQRADFMVFYDQEQFVGF 60
Query: 61 AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFY-QKTMVLEVERVDEECDNLEQR 119
A+ +++ M Y+ + A+ +RS GYG II++L Y + ++ L+VE+ + + N +QR
Sbjct: 61 AYVIHSHGMHYILYLAVNDQIRSQGYGTRIINELRRLYPEDSLALDVEQPNPQAANNQQR 120
Query: 120 QARMDFYKRNGFRTTNAFLEYEGLSFEIL 148
R+ FY+RNGF T + E ++F++L
Sbjct: 121 LRRLKFYRRNGFFPTPKLFKEEKVTFQVL 149
>gi|92089308|ref|ZP_01274256.1| GCN5-related N-acetyltransferase [Lactobacillus reuteri 100-23]
gi|91803951|gb|EAS88802.1| GCN5-related N-acetyltransferase [Lactobacillus reuteri 100-23]
Length = 176
Score = 95.5 bits (236), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 87/149 (58%), Gaps = 1/149 (0%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF 60
M L Q + + +V+ L AFP+ ER P L + +R+ F AFY++E+FVGF
Sbjct: 1 MDLDIQPVRLSLKEYKQVKQLYMRAFPKYEREPWTWLLIKSKYQRADFMAFYDQEQFVGF 60
Query: 61 AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFY-QKTMVLEVERVDEECDNLEQR 119
A+ +++ M Y+ + A+ +RS GYG II++L + ++ L+VE+ + + N +QR
Sbjct: 61 AYVIHSHGMHYILYLAVNDQIRSQGYGTRIINELRRLSPEDSLALDVEQPNPQAANNQQR 120
Query: 120 QARMDFYKRNGFRTTNAFLEYEGLSFEIL 148
R+ FY+RNGF T + E ++F++L
Sbjct: 121 LRRLKFYRRNGFFPTPKLFKEEKVTFQVL 149
>gi|116512146|ref|YP_809362.1| Acetyltransferase (GNAT) family [Lactococcus lactis subsp. cremoris
SK11]
gi|116107800|gb|ABJ72940.1| Acetyltransferase (GNAT) family [Lactococcus lactis subsp. cremoris
SK11]
Length = 172
Score = 91.7 bits (226), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 91/167 (54%), Gaps = 10/167 (5%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF 60
M+L + ++ P+ +V L + +FP+EE+ PI +A+Y +EF G
Sbjct: 1 MNLEIKNVSKTLPEYRQVIDLVKNSFPKEEQYPIWLL---------KLWAYYQNDEFCGI 51
Query: 61 AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFYQ-KTMVLEVERVDEECDNLEQR 119
++ V +E+M +V + A+ ++S GYG I+ L E +Q K + L +ER+D+E DN EQR
Sbjct: 52 SYLVSHEEMIFVLYLAVNNQVQSKGYGSAILETLKEKFQDKNITLNIERLDQEADNYEQR 111
Query: 120 QARMDFYKRNGFRTTNAFLEYEGLSFEILYLGHHFDEEAYRDIFHML 166
R+ FY++NGF T+ + G +F L F EA++ + L
Sbjct: 112 VKRLKFYQKNGFYDTDYTITDRGETFLTLTTSQSFSVEAFKKVLREL 158
>gi|116629149|ref|YP_814321.1| Acetyltransferase (GNAT) family [Lactobacillus gasseri ATCC 33323]
gi|116094731|gb|ABJ59883.1| Acetyltransferase (GNAT) family [Lactobacillus gasseri ATCC 33323]
Length = 158
Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 25 AFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGFAFAVYNEKMFYVSFFAIMPHLRSH 84
AFPE ER P + + + A Y+ E F G ++ Y+++ A+ P LR +
Sbjct: 5 AFPEWERFPWMSMVLMSLRRKLQLNAVYDGEVFCGMVCYYISDNTVYLAYLAVEPELRGN 64
Query: 85 GYGGEIIHKLTEFY-QKTMVLEVERVDEECDNLEQRQARMDFYKRNGFRTTNAFLEYEGL 143
GYG +I+H L E Y + +VL++E +D + +N QR +R+ FY++NG+R T+ L
Sbjct: 65 GYGSKILHMLEEKYPHQQIVLDIEPLDPDAENYHQRVSRLRFYQKNGWRRTHQMLVDADG 124
Query: 144 SFEILYLGHHFDEEAYRDIFHMLQEKNFFEFEIK 177
FE L +HFD++ + + F+ F I+
Sbjct: 125 EFEALVDQNHFDKKDFAKTLKQMS-LGFYRFRIE 157
>gi|90961013|ref|YP_534929.1| hypothetical protein LSL_0023 [Lactobacillus salivarius subsp.
salivarius UCC118]
gi|90820207|gb|ABD98846.1| Hypothetical protein LSL_0023 [Lactobacillus salivarius subsp.
salivarius UCC118]
Length = 186
Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 2/150 (1%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF 60
M L + I+ + D +++ + E FP+ ER+P+ N+ ++ F + Y+E E+VGF
Sbjct: 1 MVLKVEKISTKSQDFKQIKRVYEEVFPKVERIPLWLLKMRANEGKAEFCSLYDENEWVGF 60
Query: 61 AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFYQK-TMVLEVERVDEECDNLEQR 119
+ + +K+ Y+ F A+ P + GYG + + + E YQ TM L ER E N EQR
Sbjct: 61 FYTILTKKLAYIFFLAVDPDRQGDGYGSQALEVIKERYQDYTMGLSSERPSPEAPNNEQR 120
Query: 120 QARMDFYKRNGFRTTNAF-LEYEGLSFEIL 148
R FY+RNGF + +E G+ ++ L
Sbjct: 121 IRRQSFYERNGFTKAGFYSIEKGGVRYDFL 150
>gi|24379299|ref|NP_721254.1| hypothetical protein SMU.844 [Streptococcus mutans UA159]
gi|24377220|gb|AAN58560.1|AE014926_3 conserved hypothetical protein [Streptococcus mutans UA159]
Length = 176
Score = 79.7 bits (195), Expect = 8e-14, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 92/164 (56%), Gaps = 3/164 (1%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF 60
M+LT Q + V+ L AFP ER P L + +A+Y++E FVGF
Sbjct: 1 MTLTQQKVKFFSKAYHDVKRLYLSAFPPRERFPYFCLLLNSLRSLVTCYAYYDKERFVGF 60
Query: 61 AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFY-QKTMVLEVERVDEECDNLEQR 119
A+ + +++ ++ F A+ +RS GYG I+ ++ E+ +K ++L +E V+++ N EQR
Sbjct: 61 AYIIESKEQVFILFLAVNGSVRSKGYGSMILAQIREYAGRKPLILTIEPVEKDSPNSEQR 120
Query: 120 QARMDFYKRNGFRTTNAFLEYEGLS-FEILYLGHHFDEEAYRDI 162
+ R+ FY+RNG++ T+ + YEG ++IL D E ++ +
Sbjct: 121 RQRLSFYERNGYQLTSHYY-YEGQERYQILTTEQSIDLERFQKL 163
>gi|109899048|ref|YP_662303.1| hypothetical protein Patl_2738 [Pseudoalteromonas atlantica T6c]
gi|109701329|gb|ABG41249.1| conserved hypothetical protein [Pseudoalteromonas atlantica T6c]
Length = 184
Score = 79.0 bits (193), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 3/168 (1%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYT-NDERSHFFAFYNEEEFVG 59
MS+T I++ + V L +EAFPE +VP L+Y + + F A Y E++++G
Sbjct: 1 MSITFSPISSGSANYIGVIDLYKEAFPEARKVP-KWLLKYKLRNGKVGFSALYAEDKWIG 59
Query: 60 FAFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKL-TEFYQKTMVLEVERVDEECDNLEQ 118
+ E + ++ AI+ RS G+G +++ L E K +VL +E +D++ +N +Q
Sbjct: 60 LIYITEYEDIVFIQSIAILESCRSKGFGSQVLESLKNEHLGKRIVLNIEVIDKQTNNYKQ 119
Query: 119 RQARMDFYKRNGFRTTNAFLEYEGLSFEILYLGHHFDEEAYRDIFHML 166
R R +FY++NGF + ++ G + E+L G ++ I+ L
Sbjct: 120 RVKRKEFYRKNGFLPSGFIVKEPGENLEMLIYGSGITKKEIESIYKKL 167
>gi|148544543|ref|YP_001271913.1| GCN5-related N-acetyltransferase [Lactobacillus reuteri F275]
gi|148531577|gb|ABQ83576.1| GCN5-related N-acetyltransferase [Lactobacillus reuteri F275]
Length = 184
Score = 76.3 bits (186), Expect = 8e-13, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 8 ITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEE-EFVGFAFAVYN 66
I+ D ++ + FP+ E +P++ ++ F + YNEE ++VGF + VYN
Sbjct: 7 ISTNSNDFKNIKRVYNTVFPQNELLPLSLLKMRAKAGKAEFCSIYNEEGKWVGFFYTVYN 66
Query: 67 EKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFY-QKTMVLEVERVDEECDNLEQRQARMDF 125
+++ Y+ F AI PH G G + + E Y +K + L ER D + N EQR R F
Sbjct: 67 KRIAYIFFLAIDPHYHGQGLGSATLTAIKERYAEKRITLSAERPDPQAPNNEQRLRRHRF 126
Query: 126 YKRNGFRTTNAF-LEYEGLSFEILYLGHHFDEEAYRDI 162
Y +NGF T + +E + F++L + + + Y+ +
Sbjct: 127 YAKNGFVKTGLYTVEKDNEKFDLLSTQSNVNPQLYQQL 164
>gi|153815901|ref|ZP_01968569.1| hypothetical protein RUMTOR_02146 [Ruminococcus torques ATCC 27756]
gi|145846720|gb|EDK23638.1| hypothetical protein RUMTOR_02146 [Ruminococcus torques ATCC 27756]
Length = 207
Score = 76.3 bits (186), Expect = 8e-13, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Query: 6 QIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGFAFAVY 65
+ I AE +++ + EAFP+ ER P +++ A E+ +GF +
Sbjct: 18 EFICAEEKQWKEIKTIYMEAFPKRERKPYFALRHSVKTKKAVVMAATEGEQVLGFIVLIP 77
Query: 66 NEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFYQ-KTMVLEVERVDEECDNLEQRQARMD 124
+ M + A+ +RS G G I+ + Y+ K +VL +ER+D++ +N EQR AR
Sbjct: 78 YKDMVMADYLAVSSKVRSRGTGSYIMQNVCRQYKDKKIVLLIERLDDKAENKEQRIARRK 137
Query: 125 FYKRNGFRTTNAFLEYEGLSFEILYLGHHFDEEAYRDI 162
FY +N F +++ F+ EI+ G EEAY D+
Sbjct: 138 FYLKNRFTSSDIFITGASGEMEIMNFGEKVSEEAYIDL 175
>gi|154509606|ref|ZP_02045248.1| hypothetical protein ACTODO_02139 [Actinomyces odontolyticus ATCC
17982]
gi|153799240|gb|EDN81660.1| hypothetical protein ACTODO_02139 [Actinomyces odontolyticus ATCC
17982]
Length = 190
Score = 75.5 bits (184), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEE----- 55
+ LT + E P DKV+ + +FP EE++P+ E L + F A+ +
Sbjct: 2 IDLTQIPVPNEGPITDKVKEIYERSFPPEEQIPLPELLTSAQMDEVSFLAWIDPSLPAGK 61
Query: 56 ----EFVGFAFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFYQKT-MVLEVERVD 110
V F+ +FY+ F A+ RS GYG I+ E Y +LE+E V
Sbjct: 62 DGAGNVVALTFSFVFPDLFYLGFLAVDGRTRSAGYGSRILTYFRERYGDVPQLLEIEPVV 121
Query: 111 EECDNLEQRQARMDFYKRNGFRTTNAFLEYEGLSFEIL 148
E N +QR R+ FY+RNGF TN ++ +L
Sbjct: 122 REAGNYQQRVRRLKFYERNGFTVTNMLTHEADQNYRVL 159
>gi|156868661|gb|EDO62033.1| hypothetical protein CLOLEP_00893 [Clostridium leptum DSM 753]
Length = 183
Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 17 KVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGFAFAVYNEKMFYVSFFA 76
+V+ + ++FP+++R+P L + F AF ++ GF++ K+ ++ F A
Sbjct: 14 QVKRIYFDSFPKKDRMPYWMLLLMAKMNHTEFRAFCDQGRVCGFSYFAAVGKITFIMFLA 73
Query: 77 IMPHLRSHGYGGEIIHKLTEFY-QKTMVLEVERVDEECDNLEQRQARMDFYKRNGFRTTN 135
+ LRS G G ++ ++ Y + +++ +ER D+ +NLEQR R FY++NGF +T
Sbjct: 74 VDSKLRSKGCGSLMLKEIQSLYPENKVIVSIERCDKTVENLEQRLRRKRFYEKNGFLSTG 133
Query: 136 AFLEYEGLSFEILYLGHHFDEEAYRDIF 163
LE E+L FD + + + F
Sbjct: 134 CLLELSKEQQEVLVKNGEFDPQEFSEFF 161
>gi|29376076|ref|NP_815230.1| hypothetical protein EF1509 [Enterococcus faecalis V583]
gi|29343538|gb|AAO81300.1| conserved hypothetical protein [Enterococcus faecalis V583]
Length = 179
Score = 74.7 bits (182), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 19 EALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGFAF-AVYNEKMFYVSFFAI 77
EA EAFPEEER+P ++ L + + H F +E VG + + YV FFAI
Sbjct: 15 EATYIEAFPEEERLPFDQLLMSSQAGKFHLFVIQEADENVGILLNSPIAPEATYVFFFAI 74
Query: 78 MPHLRSHGYGGEIIHKLTEFYQKTMVLEVERVDEECDNLEQRQARMDFYKRNGFRTTNAF 137
H R+ G ++ L Y K ++LE E + + N QR+ R FY+RNG T
Sbjct: 75 DQHHRNKRLGSTVLALLKTRYPKGVLLESEEIGKNAANEAQREKRYQFYERNGVLDTGYL 134
Query: 138 LEYEGLSFEILYLG 151
+ GL+F I++ G
Sbjct: 135 IMDRGLTFHIMFAG 148
>gi|86604272|gb|ABD13914.1| putative acetyltransferase [Lactobacillus reuteri]
Length = 184
Score = 71.2 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 8 ITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEE-EFVGFAFAVYN 66
I+ D ++ + FP+ E +P++ ++ F + YNEE ++VGF + VYN
Sbjct: 7 ISTNSNDFKNIKRVYNTVFPQNELLPLSLLKMRAKAGKAEFCSIYNEEGKWVGFFYTVYN 66
Query: 67 EKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFYQ-KTMVLEVERVDEECDNLEQRQARMDF 125
+++ Y+ F AI PH G G + + E Y K + L ER D + N EQR R
Sbjct: 67 KRIAYIFFLAIDPHYHGQGLGSATLTAIKERYAGKQITLSAERPDPQAPNNEQRLRRHRL 126
Query: 126 YKRNGFRTTNAF-LEYEGLSFEILYLGHHFDEEAYRDI 162
Y +N F T + +E + F++L + + + Y+ +
Sbjct: 127 YAKNVFGKTGLYTVEKDNEKFDLLSIQSSVNPQFYQQL 164
>gi|42518625|ref|NP_964555.1| hypothetical protein LJ0703 [Lactobacillus johnsonii NCC 533]
gi|41582910|gb|AAS08521.1| hypothetical protein LJ_0703 [Lactobacillus johnsonii NCC 533]
Length = 142
Score = 70.9 bits (172), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 50 AFYNEEEFVGFAFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFY-QKTMVLEVER 108
A Y+ E F G ++ Y+++ A+ LR +GYG +I+H L E Y ++ +VL++E
Sbjct: 14 AVYDGETFCGMICYYISDSTVYLAYLAVTAELRGNGYGSKILHMLEEKYPEQQIVLDIEP 73
Query: 109 VDEECDNLEQRQARMDFYKRNGFRTTNAFLEYEGLSFEILYLGHHFDEEAYRDIFHMLQE 168
+D + +N QR +R+ FY++NG+R T+ L FE L +HFD++ + +
Sbjct: 74 LDPDAENYHQRVSRLRFYQKNGWRRTHQMLIDADGEFEALVDQNHFDKKDFAKTLKQMS- 132
Query: 169 KNFFEFEIK 177
F+ F I+
Sbjct: 133 LGFYRFRIE 141
>gi|58336883|ref|YP_193468.1| putative acetyltransferase [Lactobacillus acidophilus NCFM]
gi|58254200|gb|AAV42437.1| putative acetyltransferase [Lactobacillus acidophilus NCFM]
Length = 145
Score = 70.1 bits (170), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 48 FFAFYNEEEFVGFAFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKLTE-FYQKTMVLEV 106
F A Y++++F G + N+ Y+++ A+ LR GYG +I+ L + F K +V+++
Sbjct: 15 FHAIYDDDQFCGITYYAENDNTVYLTYLAVSEKLRGQGYGSKILTMLEDNFPDKQIVIDI 74
Query: 107 ERVDEECDNLEQRQARMDFYKRNGFRTTNAFLEYEGLSFEILYLGHHFDEEAY 159
E V ++ N +QR +R+ FY+RNGF T+ L+ FE L G D+ ++
Sbjct: 75 EPVTKKAKNYKQRVSRLKFYERNGFHRTDQKLKDPDGEFEALTTGERLDKNSF 127
>gi|153812140|ref|ZP_01964808.1| hypothetical protein RUMOBE_02537 [Ruminococcus obeum ATCC 29174]
gi|149831795|gb|EDM86881.1| hypothetical protein RUMOBE_02537 [Ruminococcus obeum ATCC 29174]
Length = 187
Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Query: 21 LNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGFAFAVYNEKM--FYVSFFAIM 78
L +AFPE+E+ P+ + D + +E+EF G A + +E+ + ++AI
Sbjct: 20 LYDKAFPEQEKKPLQVMEQLVADGKMEMLVLVDEDEFAGLAINLIDEEQNRALLDYYAIA 79
Query: 79 PHLRSHGYGGEIIHKLTE-FYQKTMVLEVERVDEECDNLEQRQARMDFYKRNGFRTTNAF 137
P R+ GYG + + L E F + E+E +E+ +N E+R+ R FY RNG + T F
Sbjct: 80 PEKRNGGYGSKGLEVLLERFKNYKYIFEIETQNEKAENAEERKRRKAFYLRNGLKETGLF 139
Query: 138 LEYEGLSFEIL 148
+ FE+L
Sbjct: 140 VNVYDTDFELL 150
>gi|116619094|ref|YP_819465.1| Acetyltransferase (GNAT) family [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116097941|gb|ABJ63092.1| Acetyltransferase (GNAT) family [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 171
Score = 60.8 bits (146), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 24 EAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGFAFAV-YNEKMFYVSFFAIMPHLR 82
++FPE ER+ + + + A +E+ VG V + + +V +FA+ ++R
Sbjct: 21 QSFPEYERLDFMQLAQLAKTKEPVKMALVVDEQPVGILLLVEISAQKVFVLYFAVDANIR 80
Query: 83 SHGYGGEIIHKLTEFYQKTMVLEVERVDEECDNLEQRQARMDFYKRNGFRTTNAFLEYEG 142
G G + I L E Y ++LE E ++ DN QR R DFYKRNG + + G
Sbjct: 81 GRGIGSKTIAALKEQYPNGVILESEITGQQADNEMQRVKRYDFYKRNGVNDAHLVTKNMG 140
Query: 143 LSFEILYLGHHFDEEAY 159
+F +L ++ Y
Sbjct: 141 GTFHLLRTTDEISDDDY 157
>gi|55822390|ref|YP_140831.1| hypothetical protein, truncated [Streptococcus thermophilus
CNRZ1066]
gi|55738375|gb|AAV62016.1| hypothetical protein, truncated [Streptococcus thermophilus
CNRZ1066]
Length = 138
Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 50/94 (53%)
Query: 1 MSLTSQIITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGF 60
M+L + I P KV +L AFP EER+P+ + + F A++++E F GF
Sbjct: 18 MTLEVRNICPLTPTFRKVASLYEAAFPVEERLPLRQLSWNSLKNGQSFLAYFDQEVFTGF 77
Query: 61 AFAVYNEKMFYVSFFAIMPHLRSHGYGGEIIHKL 94
+A+ + Y+ F A+ +S GYG +I+ ++
Sbjct: 78 TYAICTNNLVYLLFLAVEESKQSQGYGSQILAQV 111
>gi|154491794|ref|ZP_02031420.1| hypothetical protein PARMER_01411 [Parabacteroides merdae ATCC
43184]
gi|154088035|gb|EDN87080.1| hypothetical protein PARMER_01411 [Parabacteroides merdae ATCC
43184]
Length = 187
Score = 55.8 bits (133), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 13 PDLDKVEALNREAFPEEERVPINEFLRYTNDE-RSHFFAFYNEEEFVGFAFAVYNEKMFY 71
P LD +E E+FPE ER + DE R +A E+ +VGF + Y
Sbjct: 18 PALDLIERTYTESFPEVERRDFSLVRNLVRDESRFIVYALSKEDRYVGFITGWLFDGYTY 77
Query: 72 VSFFAIMPHLRSHGYGGEIIHKLTEFYQKTMVLEVERVDEECDNLEQRQARMDFYKRNGF 131
V FAI P R+ G G E + + F +VLEVE + E + R+ FY+R GF
Sbjct: 78 VEHFAIDPAARNGGIGAEAMKQFLVFCGTPVVLEVEMPTD-----EMSKRRIGFYERLGF 132
Query: 132 RTTN 135
+ N
Sbjct: 133 KLDN 136
>gi|150016820|ref|YP_001309074.1| hypothetical protein Cbei_1948 [Clostridium beijerinckii NCIMB
8052]
gi|149903285|gb|ABR34118.1| conserved hypothetical protein [Clostridium beijerinckii NCIMB
8052]
Length = 187
Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 26 FPEEERVPINEFLRYTNDERSHFFAFYNEEEFVGFAFAVYNEKMFYVSFFAIMPHLRSHG 85
FP E P++ + + YN E + +A ++ + ++A+ R G
Sbjct: 23 FPYGELKPLDVIQKLNKRKNYICIGLYNNNELLAYALLASSKSYLLIDYYAVCKEHRDEG 82
Query: 86 YGGEIIHKLTEFYQK--TMVLEVERVDEECDNLEQ--RQARMDFYKRNGFRTTNAFLEYE 141
G E ++ L E ++ +++EVERV+ + E+ R+ R+DFYKRNG R T+ + +
Sbjct: 83 IGSEFLNILQEHFRNYDGIIVEVERVECGPNESEKIIRKRRIDFYKRNGMRMTDIYCKLF 142
Query: 142 GLSFEILYL 150
+ + I+ L
Sbjct: 143 DIDYCIMCL 151
>gi|29347461|ref|NP_810964.1| hypothetical protein BT_2051 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339361|gb|AAO77158.1| acetyltransferase-like, GNAT family [Bacteroides thetaiotaomicron
VPI-5482]
Length = 178
Score = 53.1 bits (126), Expect = 7e-06, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 7 IITAEFPDLDKVEALNREAFPEEERVPINEFLRYTNDERS-HFFAFYNEEEFVGFAFAVY 65
I T++ +E L E+FP EE + YT+ + H ++++ +GF
Sbjct: 7 ITTSDVQHYKFMEELLVESFPPEEYRELEHLREYTDRIGNFHNNIIFDDDLPIGFITYWD 66
Query: 66 NEKMFYVSFFAIMPHLRSHGYGGEIIHKLTEFYQKTMVLEVERVDEECDNLEQRQARMDF 125
++ +YV FA P LR+ GYG + L EF ++ +VLEVER E E + R++F
Sbjct: 67 FDEFYYVEHFATNPALRNGGYGKRTLEHLCEFLKRPIVLEVERPVE-----EMAKRRINF 121
Query: 126 YKRNGF 131
Y+R+GF
Sbjct: 122 YQRHGF 127
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.326 0.141 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 678,499,088
Number of Sequences: 5470121
Number of extensions: 28669634
Number of successful extensions: 91220
Number of sequences better than 1.0e-05: 35
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 91169
Number of HSP's gapped (non-prelim): 35
length of query: 184
length of database: 1,894,087,724
effective HSP length: 125
effective length of query: 59
effective length of database: 1,210,322,599
effective search space: 71409033341
effective search space used: 71409033341
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 125 (52.8 bits)