Kingdom | Category | Genus/Species | Count |
---|---|---|---|
  |   | 35 | |
Archaea |   |   | 6 |
  |   | 35 | |
  | Euryarchaeota |   | 6 |
  |   | Methanosarcina acetivorans (mac) | 1 |
  |   | Methanococcus aeolicus (mae) | 2 |
  |   | Candidatus Methanoregula boonei (mbn) | 1 |
  |   | Methanococcus maripaludis C6 (mmx) | 2 |
Bacteria |   |   | 2028 |
  | Acidobacteria |   | 4 |
  |   | Acidobacteria bacterium (aba) | 2 |
  |   | Solibacter usitatus (sus) | 2 |
  | Actinobacteria |   | 11 |
  |   | Arthrobacter aurescens (aau) | 2 |
  |   | Frankia alni (fal) | 1 |
  |   | Frankia sp. EAN1pec (fre) | 1 |
  |   | Mycobacterium sp. KMS (mkm) | 1 |
  |   | Mycobacterium ulcerans (mul) | 1 |
  |   | Nocardia farcinica (nfa) | 1 |
  |   | Rubrobacter xylanophilus (rxy) | 4 |
  | Bacteroides |   | 15 |
  |   | Bacteroides fragilis YCH46 (bfr) | 1 |
  |   | Bacteroides fragilis NCTC9343 (bfs) | 2 |
  |   | Bacteroides vulgatus (bvu) | 1 |
  |   | Cytophaga hutchinsonii (chu) | 5 |
  |   | Flavobacterium johnsoniae (fjo) | 1 |
  |   | Flavobacterium psychrophilum (fps) | 2 |
  |   | Gramella forsetii (gfo) | 1 |
  |   | Salinibacter ruber (sru) | 2 |
  | Cyanobacteria |   | 29 |
  |   | Acaryochloris marina (amr) | 4 |
  |   | Anabaena sp. PCC7120 (ana) | 1 |
  |   | Anabaena variabilis (ava) | 1 |
  |   | Cyanobacteria Yellowstone B-Prime (cyb) | 1 |
  |   | Prochlorococcus marinus NATL1A (pme) | 3 |
  |   | Prochlorococcus marinus MIT 9215 (pmh) | 1 |
  |   | Prochlorococcus marinus MIT 9211 (pmj) | 1 |
  |   | Prochlorococcus marinus NATL2A (pmn) | 1 |
  |   | Synechococcus sp. CC9605 (syd) | 1 |
  |   | Synechococcus elongatus PCC7942 (syf) | 1 |
  |   | Synechocystis sp. PCC6803 (syn) | 6 |
  |   | Synechococcus sp. RCC307 (syr) | 3 |
  |   | Synechococcus sp. WH7803 (syx) | 1 |
  |   | Thermosynechococcus elongatus (tel) | 2 |
  |   | Trichodesmium erythraeum (ter) | 2 |
  | Deinococcus-Thermus |   | 1 |
  |   | Thermus thermophilus HB27 (tth) | 1 |
  | Firmicutes |   | 30 |
  |   | Alkaliphilus metalliredigens (amt) | 2 |
  |   | Bacillus cereus ATCC 10987 (bca) | 3 |
  |   | Bacillus cereus ATCC 14579 (bce) | 1 |
  |   | Bacillus halodurans (bha) | 4 |
  |   | Bacillus subtilis (bsu) | 4 |
  |   | Bacillus thuringiensis Al Hakam (btl) | 1 |
  |   | Clostridium acetobutylicum (cac) | 1 |
  |   | Clostridium kluyveri (ckl) | 1 |
  |   | Desulfotomaculum reducens (drm) | 1 |
  |   | Desulfitobacterium hafniense (dsy) | 1 |
  |   | Geobacillus kaustophilus (gka) | 3 |
  |   | Listeria welshimeri SLCC5334 (lwe) | 1 |
  |   | Mycoplasma capricolum (mcp) | 1 |
  |   | Oceanobacillus iheyensis (oih) | 2 |
  |   | Streptococcus suis 05ZYH33 (ssu) | 1 |
  |   | Symbiobacterium thermophilum (sth) | 1 |
  |   | Syntrophomonas wolfei (swo) | 1 |
  |   | Thermoanaerobacter tengcongensis (tte) | 1 |
  | Green nonsulfur bacteria |   | 6 |
  |   | Chloroflexus aurantiacus (cau) | 2 |
  |   | Herpetosiphon aurantiacus (hau) | 2 |
  |   | Roseiflexus castenholzii DSM13941 (rca) | 2 |
  | Green sulfur bacteria |   | 3 |
  |   | Chlorobaculum tepidum (cte) | 1 |
  |   | Prosthecochloris vibrioformis (pvi) | 2 |
  | Hyperthermophilic bacteria |   | 1 |
  |   | Aquifex aeolicus (aae) | 1 |
  | Planctomyces |   | 2 |
  |   | Rhodopirellula baltica (rba) | 2 |
  | Proteobacteria |   | 1924 |
  |   | Acidovorax avenae (aav) | 1 |
  |   | Alcanivorax borkumensis (abo) | 36 |
  |   | Arcobacter butzleri (abu) | 12 |
  |   | Acinetobacter baumannii (acb) | 3 |
  |   | Acinetobacter sp. ADP1 (aci) | 5 |
  |   | Acidiphilium cryptum JF-5 (acr) | 1 |
  |   | Anaeromyxobacter dehalogenans (ade) | 3 |
  |   | Alkalilimnicola ehrlichei (aeh) | 67 |
  |   | Anaeromyxobacter sp. Fw109-5 (afw) | 2 |
  |   | Aeromonas hydrophila (aha) | 23 |
  |   | Acidovorax sp. JS42 (ajs) | 1 |
  |   | Actinobacillus pleuropneumoniae (apl) | 7 |
  |   | Aeromonas salmonicida (asa) | 16 |
  |   | Azoarcus sp. BH72 (azo) | 20 |
  |   | Burkholderia cepacia (bam) | 3 |
  |   | Bdellovibrio bacteriovorus (bba) | 2 |
  |   | Bordetella bronchiseptica (bbr) | 1 |
  |   | Bradyrhizobium sp. BTAi1 (bbt) | 2 |
  |   | Burkholderia cenocepacia HI2424 (bch) | 2 |
  |   | Brucella canis (bcs) | 1 |
  |   | Bradyrhizobium japonicum (bja) | 4 |
  |   | Burkholderia mallei NCTC 10247 (bmn) | 1 |
  |   | Burkholderia multivorans (bmu) | 2 |
  |   | Bordetella pertussis (bpe) | 1 |
  |   | Burkholderia pseudomallei 1106a (bpl) | 1 |
  |   | Candidatus Blochmannia pennsylvanicus (bpn) | 1 |
  |   | Bordetella petrii (bpt) | 2 |
  |   | Bradyrhizobium sp. ORS278 (bra) | 3 |
  |   | Burkholderia sp. 383 (bur) | 3 |
  |   | Burkholderia vietnamiensis (bvi) | 3 |
  |   | Burkholderia xenovorans (bxe) | 5 |
  |   | Coxiella burnetii Dugway 7E9-12 (cbd) | 15 |
  |   | Coxiella burnetii RSA 331 (cbs) | 4 |
  |   | Coxiella burnetii RSA 493 (cbu) | 1 |
  |   | Campylobacter concisus 13826 (cco) | 6 |
  |   | Campylobacter curvus (ccv) | 3 |
  |   | Campylobacter hominis ATCC BAA-381 (cha) | 2 |
  |   | Campylobacter jejuni subsp. doylei 269.97 (cjd) | 1 |
  |   | Colwellia psychrerythraea (cps) | 23 |
  |   | Chromohalobacter salexigens (csa) | 31 |
  |   | Chromobacterium violaceum (cvi) | 23 |
  |   | Delftia acidovorans (dac) | 3 |
  |   | Dechloromonas aromatica (dar) | 22 |
  |   | Desulfovibrio desulfuricans (dde) | 4 |
  |   | Dichelobacter nodosus (dno) | 5 |
  |   | Candidatus Desulfococcus oleovorans (dol) | 5 |
  |   | Desulfotalea psychrophila (dps) | 7 |
  |   | Dinoroseobacter shibae (dsh) | 7 |
  |   | Desulfovibrio vulgaris DP4 (dvl) | 2 |
  |   | Azoarcus sp. EbN1 (eba) | 8 |
  |   | Erwinia carotovora (eca) | 6 |
  |   | Escherichia coli CFT073 (UPEC) (ecc) | 1 |
  |   | Escherichia coli K-12 W3110 (ecj) | 1 |
  |   | Escherichia coli O157 Sakai (EHEC) (ecs) | 1 |
  |   | Escherichia coli APEC O1 (ecv) | 1 |
  |   | Escherichia coli E24377A (ecw) | 1 |
  |   | Escherichia coli HS (ecx) | 2 |
  |   | Erythrobacter litoralis (eli) | 2 |
  |   | Enterobacter sakazakii (esa) | 3 |
  |   | Francisella tularensis subsp. holarctica FTA (fta) | 1 |
  |   | Francisella tularensis subsp. novicida U112 (ftn) | 7 |
  |   | Gluconacetobacter diazotrophicus (gdi) | 1 |
  |   | Geobacter metallireducens (gme) | 4 |
  |   | Geobacter sulfurreducens (gsu) | 6 |
  |   | Geobacter uraniumreducens (gur) | 6 |
  |   | Herminiimonas arsenicoxydans (har) | 5 |
  |   | Hahella chejuensis (hch) | 79 |
  |   | Haemophilus ducreyi (hdu) | 1 |
  |   | Halorhodospira halophila (hha) | 36 |
  |   | Haemophilus influenzae (serotype d) (hin) | 3 |
  |   | Haemophilus influenzae PittEE (hip) | 1 |
  |   | Haemophilus influenzae 86-028NP (nontypeable) (hit) | 1 |
  |   | Haemophilus somnus (hso) | 3 |
  |   | Idiomarina loihiensis (ilo) | 25 |
  |   | Jannaschia sp. CCS1 (jan) | 1 |
  |   | Klebsiella pneumoniae (kpn) | 4 |
  |   | Lawsonia intracellularis (lip) | 1 |
  |   | Legionella pneumophila Corby (lpc) | 5 |
  |   | Legionella pneumophila Lens (lpf) | 2 |
  |   | Legionella pneumophila Philadelphia 1 (lpn) | 6 |
  |   | Legionella pneumophila Paris (lpp) | 1 |
  |   | Magnetospirillum magneticum (mag) | 5 |
  |   | Marinobacter aquaeolei (maq) | 61 |
  |   | Methylococcus capsulatus (mca) | 47 |
  |   | Mesorhizobium sp. BNC1 (mes) | 1 |
  |   | Methylobacterium extorquens (mex) | 2 |
  |   | Methylobacillus flagellatus (mfa) | 51 |
  |   | Magnetococcus sp. MC-1 (mgm) | 24 |
  |   | Maricaulis maris (mmr) | 4 |
  |   | Minibacterium massiliensis (mms) | 14 |
  |   | Marinomonas sp. MWYL1 (mmw) | 59 |
  |   | Methylibium petroleiphilum (mpt) | 3 |
  |   | Mannheimia succiniciproducens (msu) | 4 |
  |   | Myxococcus xanthus (mxa) | 1 |
  |   | Novosphingobium aromaticivorans (nar) | 2 |
  |   | Nitrosomonas eutropha (net) | 20 |
  |   | Nitrosomonas europaea (neu) | 7 |
  |   | Neisseria gonorrhoeae (ngo) | 1 |
  |   | Nitrobacter hamburgensis (nha) | 1 |
  |   | Nitratiruptor sp. SB155-2 (nis) | 6 |
  |   | Neisseria meningitidis Z2491 (serogroup A) (nma) | 1 |
  |   | Neisseria meningitidis FAM18 (nmc) | 1 |
  |   | Neisseria meningitidis 053442 (nmn) | 1 |
  |   | Nitrosospira multiformis (nmu) | 18 |
  |   | Nitrosococcus oceani (noc) | 132 |
  |   | Neorickettsia sennetsu (nse) | 1 |
  |   | Nitrobacter winogradskyi (nwi) | 2 |
  |   | Ochrobactrum anthropi (oan) | 1 |
  |   | Pseudomonas aeruginosa PAO1 (pae) | 1 |
  |   | Pseudomonas aeruginosa PA7 (pap) | 23 |
  |   | Psychrobacter arcticum (par) | 3 |
  |   | Pseudoalteromonas atlantica (pat) | 28 |
  |   | Pseudomonas aeruginosa UCBPP-PA14 (pau) | 13 |
  |   | Pelobacter carbinolicus (pca) | 11 |
  |   | Psychrobacter cryohalolentis (pcr) | 2 |
  |   | Pseudomonas entomophila (pen) | 7 |
  |   | Pseudomonas fluorescens Pf-5 (pfl) | 15 |
  |   | Pseudomonas fluorescens PfO-1 (pfo) | 8 |
  |   | Pseudoalteromonas haloplanktis (pha) | 20 |
  |   | Psychromonas ingrahamii (pin) | 53 |
  |   | Photorhabdus luminescens (plu) | 5 |
  |   | Pasteurella multocida (pmu) | 4 |
  |   | Pseudomonas mendocina (pmy) | 18 |
  |   | Polaromonas naphthalenivorans (pna) | 9 |
  |   | Polynucleobacter sp. QLW-P1DMWA-1 (pnu) | 6 |
  |   | Polaromonas sp. JS666 (pol) | 3 |
  |   | Pelobacter propionicus (ppd) | 2 |
  |   | Pseudomonas putida F1 (ppf) | 8 |
  |   | Photobacterium profundum (ppr) | 20 |
  |   | Pseudomonas putida KT2440 (ppu) | 10 |
  |   | Psychrobacter sp. PRwf-1 (prw) | 9 |
  |   | Pseudomonas stutzeri (psa) | 20 |
  |   | Pseudomonas syringae pv. syringae B728a (psb) | 3 |
  |   | Pseudomonas syringae pv. phaseolicola 1448A (psp) | 8 |
  |   | Pseudomonas syringae pv. tomato DC3000 (pst) | 6 |
  |   | Roseobacter denitrificans (rde) | 1 |
  |   | Ralstonia eutropha H16 (reh) | 3 |
  |   | Ralstonia eutropha JMP134 (reu) | 4 |
  |   | Rhodoferax ferrireducens (rfr) | 2 |
  |   | Candidatus Ruthia magnifica (rma) | 28 |
  |   | Ralstonia metallidurans (rme) | 6 |
  |   | Rhodopseudomonas palustris CGA009 (rpa) | 1 |
  |   | Rhodopseudomonas palustris HaA2 (rpb) | 6 |
  |   | Rhodopseudomonas palustris BisB5 (rpd) | 2 |
  |   | Rhodopseudomonas palustris BisA53 (rpe) | 3 |
  |   | Rhodospirillum rubrum (rru) | 4 |
  |   | Rhodobacter sphaeroides ATCC 17029 (rsh) | 2 |
  |   | Ralstonia solanacearum (rso) | 4 |
  |   | Rhodobacter sphaeroides ATCC 17025 (rsq) | 1 |
  |   | Syntrophus aciditrophicus (sat) | 4 |
  |   | Shewanella amazonensis (saz) | 14 |
  |   | Shewanella baltica OS155 (sbl) | 3 |
  |   | Shewanella baltica OS185 (sbm) | 3 |
  |   | Shewanella baltica OS195 (sbn) | 1 |
  |   | Sorangium cellulosum (scl) | 3 |
  |   | Saccharophagus degradans (sde) | 44 |
  |   | Shewanella denitrificans (sdn) | 9 |
  |   | Shewanella frigidimarina (sfr) | 14 |
  |   | Syntrophobacter fumaroxidans (sfu) | 6 |
  |   | Shewanella sp. MR-4 (she) | 2 |
  |   | Shewanella sp. MR-7 (shm) | 1 |
  |   | Shewanella sp. ANA-3 (shn) | 14 |
  |   | Shewanella sp. W3-18-1 (shw) | 7 |
  |   | Silicibacter pomeroyi (sil) | 3 |
  |   | Silicibacter sp. TM1040 (sit) | 3 |
  |   | Shewanella loihica (slo) | 15 |
  |   | Sinorhizobium meliloti (sme) | 1 |
  |   | Shewanella oneidensis (son) | 5 |
  |   | Shewanella putrefaciens (spc) | 5 |
  |   | Serratia proteamaculans (spe) | 9 |
  |   | Shewanella pealeana (spl) | 12 |
  |   | Salmonella enterica serovar Paratyphi A (spt) | 2 |
  |   | Shewanella sediminis (sse) | 14 |
  |   | Salmonella enterica serovar Typhi Ty2 (stt) | 1 |
  |   | Sulfurovum sp. NBC37-1 (sun) | 38 |
  |   | Sphingomonas wittichii (swi) | 2 |
  |   | Thiobacillus denitrificans (tbd) | 62 |
  |   | Thiomicrospira denitrificans (tdn) | 17 |
  |   | Vibrio cholerae O1 (vch) | 2 |
  |   | Vibrio cholerae O395 (vco) | 17 |
  |   | Verminephrobacter eiseniae (vei) | 1 |
  |   | Vibrio fischeri (vfi) | 14 |
  |   | Vibrio harveyi (vha) | 17 |
  |   | Candidatus Vesicomyosocius okutanii (vok) | 13 |
  |   | Vibrio parahaemolyticus (vpa) | 14 |
  |   | Vibrio vulnificus CMCP6 (vvu) | 4 |
  |   | Vibrio vulnificus YJ016 (vvy) | 11 |
  |   | Wolinella succinogenes (wsu) | 5 |
  |   | Xanthomonas axonopodis (xac) | 5 |
  |   | Xanthobacter autotrophicus (xau) | 1 |
  |   | Xanthomonas campestris pv. campestris 8004 (xcb) | 7 |
  |   | Xanthomonas campestris pv. vesicatoria (xcv) | 1 |
  |   | Xylella fastidiosa 9a5c (xfa) | 2 |
  |   | Xylella fastidiosa Temecula1 (xft) | 2 |
  |   | Xanthomonas oryzae MAFF311018 (xom) | 3 |
  |   | Yersinia enterocolitica (yen) | 8 |
  |   | Yersinia pestis Antiqua (ypa) | 1 |
  |   | Yersinia pestis Angola (ypg) | 1 |
  |   | Yersinia pseudotuberculosis IP31758 (ypi) | 2 |
  |   | Yersinia pestis KIM (ypk) | 1 |
  |   | Yersinia pseudotuberculosis IP32953 (yps) | 2 |
  |   | Zymomonas mobilis (zmo) | 1 |
  | Spirochete |   | 2 |
  |   | Leptospira borgpetersenii L550 (lbl) | 1 |
  |   | Leptospira interrogans serovar Copenhageni (lic) | 1 |
Eukaryotes |   |   | 12 |
  | Animals |   | 5 |
  |   | Bos taurus (cow) (bta) | 1 |
  |   | Nematostella vectensis (sea anemone) (nve) | 1 |
  |   | Rattus norvegicus (rat) (rno) | 2 |
  |   | Strongylocentrotus purpuratus (purple sea urchin) (spu) | 1 |
  | Fungi |   | 1 |
  |   | Saccharomyces cerevisiae (sce) | 1 |
  | Plants |   | 2 |
  |   | Ostreococcus lucimarinus (olu) | 1 |
  |   | Oryza sativa japonica (Japanese rice) (osa) | 1 |
  | Protists |   | 4 |
  |   | Trypanosoma cruzi (tcr) | 1 |
  |   | Trichomonas vaginalis (tva) | 3 |
NULL |   |   | 112 |
TOTAL |   |   | 2193 |
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