Reference SNP(refSNP) Cluster Report: rs12547588

Reference SNP(refSNP) Cluster Report: rs12547588

refSNP ID: rs12547588
Organism:	human (Homo sapiens)
Molecule Type:	Genomic
Created/Updated in build:	120/129
Map to Genome Build:	36.3

Allele
Variation Class:	SNP: single nucleotide polymorphism
RefSNP Alleles:	A/G
Ancestral Allele:	A
Clinical Association:	unknown

HGVS Names
NM_015117.2:c.1903+627T>C
NT_023684.17:g.521808A>G

Links

, Linkout

SNP Details are organized in the following sections:

Submitter records for this RefSNP Cluster

The submission ss44862547 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs12547588 during BLAST analysis for the current build.

NCBI Assay ID	Handle\|Submitter ID	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Success Rate
ss19760782	CSHL-HAPMAP\|CSHL-HuDD-200402.chr8.NT_023684.16_489784	fwd/T	A/G	aagggggtaaaattggactgaaaccaaaat	tttttctagttaatttgtaggataagtgaa	02/20/04	03/04/04	120	Genomic	unknown
ss44862547	ABI\|hCV9273730	fwd/T	A/G	aagggggtaaaattggactgaaaccaaaat	tttttctagttaatttgtaggataagcgaa	07/19/05	11/03/06	126	Genomic	unknown
ss67339787	ILLUMINA\|HumanHap650Yv1.0_rs12547588	fwd/T	A/G	aagggggtaaaattggactgaaaccaaaat	tttttctagttaatttgtaggataagtgaa	11/14/06	11/14/06	127	Genomic	unknown
ss69066330	PERLEGEN\|PGP07002542	fwd/T	A/G	aagggggtaaaattggactgaaaccaaaat	tttttctagttaatttgtaggataagtgaa	01/30/07	03/31/08	127	Genomic	unknown
ss71115447	ILLUMINA\|HumanHap650Yv3.0_rs12547588	fwd/T	A/G	aagggggtaaaattggactgaaaccaaaat	tttttctagttaatttgtaggataagcgaa	04/23/07	04/23/07	127	Genomic	unknown
ss75343805	ILLUMINA\|ILMN_Human_1M_rs12547588	fwd/T	A/G	aagggggtaaaattggactgaaaccaaaat	tttttctagttaatttgtaggataagcgaa	08/28/07	08/29/07	129	Genomic	unknown
ss78396851	HGSV\|Cor12878_SNV_20070510.chr8_144628084	fwd/T	A/G	aagggggtaaaattggactgaaaccaaaat	tttttctagttaatttgtaggataagtgaa	10/17/07	10/19/07	129	Genomic	unknown
ss93989054	BCMHGSC_JDW\|JWB-2541362	fwd/T	A/G	aagggggtaaaattggactgaaaccaaaat	tttttctagttaatttgtaggataagtgaa	02/26/08	03/05/08	129	Genomic	unknown

Fasta sequence (Legend)

 CTGCCCAGGA AACAGCCCAG AAGCCCCTGG AGCCCAGAGA TGGATGCTAG GAACACAGCC
 AGGCAGGGCG GCCAGTGAGG CTGGCTTCCA GGGAGGTACG CTTCCTGCCT CTCCTCTGAC
 CCCCGCAGAC CCTGCCGTCG GAGTCTACCT CCTCCAGGGG CTGAACCTGT TCTCTCTCTA
 GGTCCCAGGC GGGTCGGGGA GCCAGCATGG CCCAGCCTCT GCAATCCCAA CACCACCTGC
 AATCTCCCTC TTTTTTTTTG ATGGACAAGA AAGGGGGTAA AATTGGACTG AAACCAAAAT
 R
 TTTTTCTAGT TAATTTGTAG GATAAGCGAA TCCAAAGCAT TTCCTTCTCC TGAGCCTGTT
 TCCCTGGGCT GGGAGGGCGC AAGGTGGCGG CGCCAGCTGC CTCCAGACAC AGTTGTCGAG
 GCGTCGCCAA TGCGATTACG GGCGCCGCGG CCCCAGGTGT GCGCTCGCCC GGGCGTGTTT
 GCCGTACCTG GCATCATCCT TTTTCCAAAA GCGAAACATG GTGCTTGTGA GCAACTCTCC
 CCCACCCCAC AGAAAATCAG GGGCCGCTCA GCCACGCGAG GTGGGCGCCA CTCCAGGGCC

GeneView

GeneView via analysis of contig annotation: ZC3H3 zinc finger CCCH-type containing 3

View variations for gene:

Include clinically associated:

in gene region cSNP has frequency double hit

Group
Label

Contig->mRNA

Gene Model (contig mRNA transcript) Color Legend

reference

NT_023684->NM_015117

function

HuRef

NW_001839142->NM_015117

function

Celera

NW_924018->NM_015117

function

Group label	Contig-->mRNA-->Protein	Contig position	mRNA orientation	Function


reference	NT_023684->NM_015117->NP_055932	521808	reverse	intron

HuRef	NW_001839142->NM_015117->NP_055932	1609012	forward	intron

Celera	NW_924018->NM_015117->NP_055932	1775757	reverse	intron

GeneView: no link established by BLAST analysis of mRNA sequences

Integrated Maps:

NCBI MapViewer: rs12547588 maps exactly once on NCBI human chromosome 8

Chromosome	Contig accession	Contig position	Chromosome position	Hit orientation	Contig Allele	Assembly Type	Group label	Contig label	Neighbor SNP	SNP_flank position
8	NW_001839142.2	1609012	139809589	minus	T	alt_assembly_8	HuRef	HuRef	view	300
8	NW_924018.1	1775757	140868569	plus	A	alt_assembly_1	Celera	Celera	view	300
8	NT_023684.17	521808	144628084	plus	A	ref_assembly	reference	reference	view	300

NCBI Resource Links

Submitter-Referenced
GenBank
NT_023684

dbSNP Blast Analysis
GenBank HTGS Finished:	GenBank HTGS Draft:
AC067930.7 AC105118.23 NC_000008.9	AC019122.3 AC024049.2 AC087823.2 AF276758.2

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	A/A	A/G	G/G	HWP	A	G
ss44862547	HapMap-CEU	European	114	IG	0.579	0.298	0.123	0.100	0.728	0.272

	HapMap-HCB	Asian	88	IG	0.955	0.045		1.000	0.977	0.023

	HapMap-JPT	Asian	86	IG	0.953	0.047		1.000	0.977	0.023

	HapMap-YRI	Sub-Saharan African	118	IG	0.695	0.271	0.034	1.000	0.831	0.169

ss69066330	HapMap-CEU	European	120	GF	0.333	0.583	0.083		0.625	0.375

	HapMap-HCB	Asian	90	GF	0.667	0.333			0.833	0.167

	HapMap-JPT	Asian	90	GF	0.600	0.400			0.800	0.200

	HapMap-YRI	Sub-Saharan African	120	GF	0.567	0.400	0.033		0.767	0.233

Concordant Genotype	Total Sample	A/A	A/G	G/G
ss44862547	195	128	54	6
ss69066330	195	131	58	6

RefSNP Genotype Summary	Total Individual	A/A	A/G	G/G
rs12547588	270	131	58	6

Discordant Genotypes:
Indiviudal SampleID	SubSNP(ss)	Genotype	Population Handle	Submitter Population	Submitter SampleID	SampleID Alias	Submission Batch	NCBI ProbeID
157	ss44862547	G/G	CSHL-HAPMAP	HapMap-CEU	NA12144	CEPH1334.10	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
157	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA12144	CEPH1334.10	chr8-HapMap-CEU
169	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA06994	CEPH1340.09	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
169	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA06994	CEPH1340.09	chr8-HapMap-CEU
184	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA07034	CEPH1341.11	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
184	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA07034	CEPH1341.11	chr8-HapMap-CEU
185	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA07055	CEPH1341.12	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
185	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA07055	CEPH1341.12	chr8-HapMap-CEU
186	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA06993	CEPH1341.13	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
186	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA06993	CEPH1341.13	chr8-HapMap-CEU
187	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA06985	CEPH1341.14	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
187	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA06985	CEPH1341.14	chr8-HapMap-CEU
200	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA12057	CEPH1344.13	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
200	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA12057	CEPH1344.13	chr8-HapMap-CEU
215	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA10857	CEPH1346.01	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
215	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA10857	CEPH1346.01	chr8-HapMap-CEU
225	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA12043	CEPH1346.11	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
225	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA12043	CEPH1346.11	chr8-HapMap-CEU
362	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA11994	CEPH1362.15	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
362	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA11994	CEPH1362.15	chr8-HapMap-CEU
366	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA10863	CEPH1375.02	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
366	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA10863	CEPH1375.02	chr8-HapMap-CEU
373	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA12264	CEPH1375.11	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
373	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA12264	CEPH1375.11	chr8-HapMap-CEU
410	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA12155	CEPH1408.12	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
410	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA12155	CEPH1408.12	chr8-HapMap-CEU
456	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA10838	CEPH1420.01	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
456	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA10838	CEPH1420.01	chr8-HapMap-CEU
466	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA12005	CEPH1420.11	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
466	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA12005	CEPH1420.11	chr8-HapMap-CEU
537	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA12752	CEPH1447.01	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
537	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA12752	CEPH1447.01	chr8-HapMap-CEU
546	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA12761	CEPH1447.10	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
546	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA12761	CEPH1447.10	chr8-HapMap-CEU
619	ss44862547	A/A	CSHL-HAPMAP	HapMap-CEU	NA12873	CEPH1459.10	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
619	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA12873	CEPH1459.10	chr8-HapMap-CEU
623	ss44862547	G/G	CSHL-HAPMAP	HapMap-CEU	NA12878	CEPH1463.02	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
623	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA12878	CEPH1463.02	chr8-HapMap-CEU
636	ss44862547	G/G	CSHL-HAPMAP	HapMap-CEU	NA12891	CEPH1463.15	r23_ch8_CEU_perlegen:genotyping_1.0.0	3792472
636	ss69066330	A/G	CSHL-HAPMAP	HapMap-CEU	NA12891	CEPH1463.15	chr8-HapMap-CEU
5133	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA18502	YOR004.02	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5133	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA18502	YOR004.02	chr8-HapMap-YRI
5136	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA19132	YOR101.01	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5136	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA19132	YOR101.01	chr8-HapMap-YRI
5137	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA19131	YOR101.02	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5137	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA19131	YOR101.02	chr8-HapMap-YRI
5139	ss44862547	A/G	CSHL-HAPMAP	HapMap-YRI	NA19100	YOR105.01	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5139	ss69066330	A/A	CSHL-HAPMAP	HapMap-YRI	NA19100	YOR105.01	chr8-HapMap-YRI
5143	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA19193	YOR112.02	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5143	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA19193	YOR112.02	chr8-HapMap-YRI
5148	ss44862547	A/A	CSHL-HAPMAP	HapMap-HCB	NA18526	CH18526	r23_ch8_HCB_perlegen:genotyping_1.0.0	3792472
5148	ss69066330	A/G	CSHL-HAPMAP	HapMap-HCB	NA18526	CH18526	chr8-HapMap-HCB
5152	ss44862547	A/A	CSHL-HAPMAP	HapMap-HCB	NA18532	CH18532	r23_ch8_HCB_perlegen:genotyping_1.0.0	3792472
5152	ss69066330	A/G	CSHL-HAPMAP	HapMap-HCB	NA18532	CH18532	chr8-HapMap-HCB
5154	ss44862547	A/A	CSHL-HAPMAP	HapMap-HCB	NA18562	CH18562	r23_ch8_HCB_perlegen:genotyping_1.0.0	3792472
5154	ss69066330	A/G	CSHL-HAPMAP	HapMap-HCB	NA18562	CH18562	chr8-HapMap-HCB
5156	ss44862547	A/A	CSHL-HAPMAP	HapMap-HCB	NA18603	CH18603	r23_ch8_HCB_perlegen:genotyping_1.0.0	3792472
5156	ss69066330	A/G	CSHL-HAPMAP	HapMap-HCB	NA18603	CH18603	chr8-HapMap-HCB
5159	ss44862547	A/A	CSHL-HAPMAP	HapMap-HCB	NA18542	CH18542	r23_ch8_HCB_perlegen:genotyping_1.0.0	3792472
5159	ss69066330	A/G	CSHL-HAPMAP	HapMap-HCB	NA18542	CH18542	chr8-HapMap-HCB
5160	ss44862547	A/A	CSHL-HAPMAP	HapMap-HCB	NA18545	CH18545	r23_ch8_HCB_perlegen:genotyping_1.0.0	3792472
5160	ss69066330	A/G	CSHL-HAPMAP	HapMap-HCB	NA18545	CH18545	chr8-HapMap-HCB
5161	ss44862547	A/A	CSHL-HAPMAP	HapMap-HCB	NA18572	CH18572	r23_ch8_HCB_perlegen:genotyping_1.0.0	3792472
5161	ss69066330	A/G	CSHL-HAPMAP	HapMap-HCB	NA18572	CH18572	chr8-HapMap-HCB
5168	ss44862547	A/A	CSHL-HAPMAP	HapMap-HCB	NA18555	CH18555	r23_ch8_HCB_perlegen:genotyping_1.0.0	3792472
5168	ss69066330	A/G	CSHL-HAPMAP	HapMap-HCB	NA18555	CH18555	chr8-HapMap-HCB
5169	ss44862547	A/G	CSHL-HAPMAP	HapMap-HCB	NA18564	CH18564	r23_ch8_HCB_perlegen:genotyping_1.0.0	3792472
5169	ss69066330	A/A	CSHL-HAPMAP	HapMap-HCB	NA18564	CH18564	chr8-HapMap-HCB
5173	ss44862547	A/A	CSHL-HAPMAP	HapMap-HCB	NA18612	CH18612	r23_ch8_HCB_perlegen:genotyping_1.0.0	3792472
5173	ss69066330	A/G	CSHL-HAPMAP	HapMap-HCB	NA18612	CH18612	chr8-HapMap-HCB
5179	ss44862547	A/A	CSHL-HAPMAP	HapMap-HCB	NA18573	CH18573	r23_ch8_HCB_perlegen:genotyping_1.0.0	3792472
5179	ss69066330	A/G	CSHL-HAPMAP	HapMap-HCB	NA18573	CH18573	chr8-HapMap-HCB
5180	ss44862547	A/A	CSHL-HAPMAP	HapMap-HCB	NA18623	CH18623	r23_ch8_HCB_perlegen:genotyping_1.0.0	3792472
5180	ss69066330	A/G	CSHL-HAPMAP	HapMap-HCB	NA18623	CH18623	chr8-HapMap-HCB
5188	ss44862547	A/A	CSHL-HAPMAP	HapMap-HCB	NA18635	CH18635	r23_ch8_HCB_perlegen:genotyping_1.0.0	3792472
5188	ss69066330	A/G	CSHL-HAPMAP	HapMap-HCB	NA18635	CH18635	chr8-HapMap-HCB
5189	ss44862547	A/A	CSHL-HAPMAP	HapMap-HCB	NA18592	CH18592	r23_ch8_HCB_perlegen:genotyping_1.0.0	3792472
5189	ss69066330	A/G	CSHL-HAPMAP	HapMap-HCB	NA18592	CH18592	chr8-HapMap-HCB
5196	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA18943	JA18943	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5196	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA18943	JA18943	chr8-HapMap-JPT
5197	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA18947	JA18947	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5197	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA18947	JA18947	chr8-HapMap-JPT
5203	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA18956	JA18956	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5203	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA18956	JA18956	chr8-HapMap-JPT
5204	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA18964	JA18964	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5204	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA18964	JA18964	chr8-HapMap-JPT
5205	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA18953	JA18953	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5205	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA18953	JA18953	chr8-HapMap-JPT
5210	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA18961	JA18961	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5210	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA18961	JA18961	chr8-HapMap-JPT
5213	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA18973	JA18973	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5213	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA18973	JA18973	chr8-HapMap-JPT
5215	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA18975	JA18975	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5215	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA18975	JA18975	chr8-HapMap-JPT
5218	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA18978	JA18978	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5218	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA18978	JA18978	chr8-HapMap-JPT
5219	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA18970	JA18970	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5219	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA18970	JA18970	chr8-HapMap-JPT
5221	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA18995	JA18995	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5221	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA18995	JA18995	chr8-HapMap-JPT
5225	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA18987	JA18987	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5225	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA18987	JA18987	chr8-HapMap-JPT
5227	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA18991	JA18991	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5227	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA18991	JA18991	chr8-HapMap-JPT
5228	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA18994	JA18994	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5228	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA18994	JA18994	chr8-HapMap-JPT
5233	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA19005	JA19005	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5233	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA19005	JA19005	chr8-HapMap-JPT
5235	ss44862547	A/A	CSHL-HAPMAP	HapMap-JPT	NA19007	JA19007	r23_ch8_JPT_perlegen:genotyping_1.0.0	3792472
5235	ss69066330	A/G	CSHL-HAPMAP	HapMap-JPT	NA19007	JA19007	chr8-HapMap-JPT
5240	ss44862547	A/G	CSHL-HAPMAP	HapMap-YRI	NA18504	YOR005.03	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5240	ss69066330	A/A	CSHL-HAPMAP	HapMap-YRI	NA18504	YOR005.03	chr8-HapMap-YRI
5241	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA18506	YOR009.01	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5241	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA18506	YOR009.01	chr8-HapMap-YRI
5243	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA18507	YOR009.03	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5243	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA18507	YOR009.03	chr8-HapMap-YRI
5254	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA18870	YOR017.02	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5254	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA18870	YOR017.02	chr8-HapMap-YRI
5255	ss44862547	A/G	CSHL-HAPMAP	HapMap-YRI	NA18871	YOR017.03	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5255	ss69066330	A/A	CSHL-HAPMAP	HapMap-YRI	NA18871	YOR017.03	chr8-HapMap-YRI
5256	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA18854	YOR018.01	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5256	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA18854	YOR018.01	chr8-HapMap-YRI
5265	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA18914	YOR028.01	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5265	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA18914	YOR028.01	chr8-HapMap-YRI
5267	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA18913	YOR028.03	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5267	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA18913	YOR028.03	chr8-HapMap-YRI
5268	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA19094	YOR040.01	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5268	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA19094	YOR040.01	chr8-HapMap-YRI
5269	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA19093	YOR040.02	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5269	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA19093	YOR040.02	chr8-HapMap-YRI
5282	ss44862547	A/G	CSHL-HAPMAP	HapMap-YRI	NA19171	YOR047.03	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5282	ss69066330	A/A	CSHL-HAPMAP	HapMap-YRI	NA19171	YOR047.03	chr8-HapMap-YRI
5289	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA19208	YOR051.01	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5289	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA19208	YOR051.01	chr8-HapMap-YRI
5292	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA19161	YOR056.01	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5292	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA19161	YOR056.01	chr8-HapMap-YRI
5294	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA19160	YOR056.03	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5294	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA19160	YOR056.03	chr8-HapMap-YRI
5295	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA19221	YOR058.01	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5295	ss69066330	G/G	CSHL-HAPMAP	HapMap-YRI	NA19221	YOR058.01	chr8-HapMap-YRI
5296	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA19222	YOR058.02	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5296	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA19222	YOR058.02	chr8-HapMap-YRI
5299	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA19116	YOR060.02	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5299	ss69066330	G/G	CSHL-HAPMAP	HapMap-YRI	NA19116	YOR060.02	chr8-HapMap-YRI
5300	ss44862547	G/G	CSHL-HAPMAP	HapMap-YRI	NA19119	YOR060.03	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5300	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA19119	YOR060.03	chr8-HapMap-YRI
5305	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA19152	YOR072.02	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5305	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA19152	YOR072.02	chr8-HapMap-YRI
5310	ss44862547	A/A	CSHL-HAPMAP	HapMap-YRI	NA19129	YOR077.01	r23_ch8_YRI_perlegen:genotyping_1.0.0	3792472
5310	ss69066330	A/G	CSHL-HAPMAP	HapMap-YRI	NA19129	YOR077.01	chr8-HapMap-YRI

Genotype data submitted for	270	samples from	270	individuals	Individual with multiple genotypes submission:	270

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
	UNKNOWN	UNKNOWN	UNKNOWN

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Revised: May 25, 2006 1:38 PM .