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UniSTS:37873 Links
STS-U89896
Homo sapiens chromosome 9;19, loci JAK2 and CSNK1G2
Macaca mulatta chromosome 19;15, loci LOC709484 and JAK2
Pan troglodytes chromosome 19;9, loci JAK2 and CSNK1G2

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:CTGAATCTTCTCCGTGCAGC
Reverse primer:GAGGGGAGGACTAGACACAGG
PCR product size:215 (bp), Homo sapiens

   Homo sapiens
Name: STS-U89896
Also known as: sts-U89896
Polymorphism info:  

Cross References Help
Gene GeneID:1455
 Symbol:CSNK1G2
 Description:casein kinase 1, gamma 2
 Position:19p13.3
Gene GeneID:3717
 Symbol:JAK2
 Description:Janus kinase 2 (a protein tyrosine kinase)
 Position:9p24
UniGeneHs.651905 Casein kinase 1, gamma 2
 Hs.656213 Janus kinase 2 (a protein tyrosine kinase)

Mapping InformationHelp
STS-U89896 Sequence Map: Chr 9|Celera Map Viewer
  Position: 4967568-4968103 (bp)
 
STS-U89896 Sequence Map: Chr 9|HuRef Map Viewer
  Position: 4997492-4998028 (bp)
 
STS-U89896 Sequence Map: Chr 9 Map Viewer
  Position: 5031944-5032479 (bp)
 
STS-U89896 Sequence Map: Chr 19|HuRef Map Viewer
  Position: 1752488-1752702 (bp)
 
STS-U89896 Sequence Map: Chr 19|Celera Map Viewer
  Position: 1914222-1914436 (bp)
 
STS-U89896 Sequence Map: Chr 19 Map Viewer
  Position: 1931223-1931437 (bp)
 
sts-U89896 NCBI RH Map: Chr 9 Map Viewer
  Position: 14.3 (cR)
  Lod score: 1.42
 
sts-U89896 GeneMap99-GB4 Map: Chr 9 Map Viewer
  Position: 26.77 (cR3000)
  Lod score: 1.21
  Reference Interval: D9S178-D9S168

Electronic PCR results Help
RefSeq mRNA (1)
NM_001319.6 1792 .. 2006 (215 bp)  
 
mRNA (5 of 6)[Show All Hits]
U89896.1 1508 .. 1722 (215 bp)  
AY007134.1 493 .. 707 (215 bp)  
BC020972.1 1322 .. 1536 (215 bp)  
BC018699.2 1765 .. 1979 (215 bp)  
BC018693.2 1765 .. 1979 (215 bp)  
 
Genomic (5 of 14)[Show All Hits]
AL161450.14 23235 .. 23770 (536 bp)  
AC005306.2 30299 .. 30513 (215 bp)  
CH003466.1 1979962 .. 1980176 (215 bp)  
CH003456.1 5090838 .. 5091376 (539 bp)  
CH003514.1 834267 .. 834481 (215 bp)  
 
ESTs (5 of 57)[Show All Hits]
W72092.1 29 .. 240 (212 bp)  
AA052932.1 28 .. 237 (210 bp)  
AA148169.1 28 .. 236 (209 bp)  
AA609691.1 186 .. 397 (212 bp)  
AA669193.1 26 .. 239 (214 bp)  
 
Whole Genome Shotgun sequences (5 of 8)[Show All Hits]
AADD01161969.1 767 .. 981 (215 bp)  
AADD01097348.1 13648 .. 14186 (539 bp)  
AADC01136483.1 11979 .. 12193 (215 bp)  
AADC01080925.1 4653 .. 5191 (539 bp)  
AADB02019952.1 56841 .. 57055 (215 bp)  
 

   Macaca mulatta
Name: STS-U89896
Polymorphism info:  

Cross References Help
Gene GeneID:694184
 Symbol:JAK2
 Description:Janus kinase 2
 Position: 
Gene GeneID:709484
 Symbol:LOC709484
 Description:hypothetical protein LOC709484
 Position: 
UniGeneMmu.10077 Hypothetical protein LOC709484

Mapping InformationHelp
STS-U89896 Sequence Map: Chr 15 Map Viewer
  Position: 72171043-72171258 (bp)
 
STS-U89896 Sequence Map: Chr 19 Map Viewer
  Position: 1760589-1760806 (bp)

   Pan troglodytes
Name: STS-U89896
Polymorphism info:  

Cross References Help
Gene GeneID:455559
 Symbol:CSNK1G2
 Description:casein kinase 1, gamma 2
 Position: 
Gene GeneID:464979
 Symbol:JAK2
 Description:Janus kinase 2 (a protein tyrosine kinase)
 Position: 

Mapping InformationHelp
STS-U89896 Sequence Map: Chr 9 Map Viewer
  Position: 5151958-5152163 (bp)
 
STS-U89896 Sequence Map: Chr 19 Map Viewer
  Position: 1966376-1966590 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XM_512246.2 1200 .. 1414 (215 bp)  
 
Genomic (2)
CM000333.1 1966376 .. 1966590 (215 bp)  
CM000323.1 5151958 .. 5152163 (206 bp)  
 
Whole Genome Shotgun sequences (4)
AADA01137893.1 880 .. 1094 (215 bp)  
AADA01036386.1 9787 .. 9992 (206 bp)  
AACZ02180651.1 811 .. 1025 (215 bp)  
AACZ02101891.1 20504 .. 20709 (206 bp)  
 

 

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