Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss12463477	WI_SSAHASNP|chr19.NT_011295.10_525111		fwd/B	C/T	cctcaccaatgtattgtggttttgatgtta	ttccttaatgactgatgttgttaatcatct	07/04/03	10/25/06	116	Genomic			unknown

Fasta sequence   (Legend)

 AAAGATTGTT ATAACCCTGG TAATGTTTAA AAGTGGTAAT ATTGATTATT GATCTGAGTC
 AGATGTTAAA GTAGCAGCGT CACGGTTCTT ACATCAGTGC TGTCATGAGA GTCGCGGTGG
 AAGCCAGAGA GAGGAGGCAT GTTCATACAA AGCAAATTAA ATCCCCTCCC GAGGTGTGGG
 CCACCATACC TCACCAATGT attgtggttt tgatgtta
 Y
 ttccttaatg actgatgttg ttaatcatct tttcatgtgt ttacagttca tttctgtaaa
 tttggagaaa tgtctgttct gttcaagtct cctgcccact tttttactgg gttgtctttg
 ttgttgagtt tataatgata ttaaatccct atcacataca tgatttgcaa atattttcca
 ccattctgtg tctcattcac tttcttgata atgtccttga tgttaattct aaatgtttgg
 tagggttcac cagtgaagcc ccttggtcct ggactttttt tttttttttt tgagacggag
 tcttgctctg tcgcccaggc tggagtgcag tggcgcaatc tcggctcact gcaagctccg
 cctcccaggt tcacaccatt ctcctgcctc agcctcccga gtagctggga ctacaggcac
 tcatcaccac gcctggctaa ttttttgtat ttttagtaga gatggggttt taccgtgtta
 gccaggatgg tctcgatctc ctgacctcct gatccacccg cctcggcctc ccaaaatgct
 gggattacag gcgtgagcca ccgtgcccag ctggtcctgg actttttatt taatggcttt
 tgatgactgc ctcagtctct tgttataggt ctctcaattt tctttttctt ctagagcctg
 tttgggtatg tttcaaggaa tttgatacat ctagagcatt gatccccaag ccctgggcca
 cagacaggta ccggtccctg gccttttagg aacaaggccc tgccgcagga ggtgagcgga
 gggcaagtga gtgaagcttc atctgtattt acagcggctc cccatcactc acattacccc
 tgaactccac ctcctgtcag atcatcagca gcattagatt ctcatagggg cgcagaccct
 attgtgcact gcacatgcaa gggatctaga ttgcacactc cttatgaaaa tctaatgcct
 gatgatctgt cagtgtctcc catcacctcc agatgggacc atctagtttc aggaaaacac
 tctcagggct tccactaatt ctatattatg gtgagttgta taattatttt accatatatt
 acaatgtaat aataatagaa ataaagtgca caataaatgt aatgcactca agtcatccca
 aaaccatccc ccctcacctc accatccatg gaaaaattgt cttccatgac accagtctct
 gatgccaaat tgggtgggga ctgctagtgt agatgatcta atgtgttggt gcataattgt
 tcatggcatt ctcttacagc cctttgaatt tccgtaaggt cggtagtaat gtcccacttc
 cactgatgat tttagttact tgcatctttt tttgttagta attctagctg tagttttgtc
 acctttgttg atctttttga aagaaccaac ttttgttttc attaattctc ctattctcta
 tttcatttgt ctctgcttta atctttattt cttcactttt GCTTTCCCTA GGTTTAGTGT
 GTCAAGGTAG TTGTTtttgt ttgtttgttt gtttgtttgt ttgtttgaga ctgagtctcg
 ctctctcacc caggctagag tgtgatggca cgatctcagc ttacctcaac ctccgcctcc
 cgggttcaag cgattctcct gcctcagcct cccgagtagc tgggattaca ggcatgcacc
 accatgccca gctaattctt tgtattttta gtagagacgg ggtttctcca tgttggtcag
 gctggtctcg aactctcgac ctcaggtgat ccacccacct tggtctccca aagtgctggg
 attacaggtg ggagccactg cacctggctG GAACTGGTTT TTGTATGAGA TGTCTTACTG
 GTGGCTTTTC CTAGGCAAAG GGAATAAGAT CTCGAGTTCC TACTGGAACC TAAGTGTTAG
 AGATGGGGAT TCAGGTTAAA TGAGTGGATG TGATTACCTG GGCAAAGCAT GAGGCATGCG
 AAGGAATGGG TAAA

GeneView

Group Label	Contig->mRNA	Gene Model (contig mRNA transcript) Color Legend
reference	NT_011295->NM_020933 sv function
HuRef	NW_001838483->NM_020933 sv function
Celera	NW_927195->NM_020933 sv function

Integrated Maps:

NCBI Resource Links

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	C/C	C/T	T/T	HWP	C	T
ss12463477	HapMap-CEU	European	116	IG		0.155	0.845	0.527	0.078	0.922
	HapMap-HCB	Asian	90	IG		0.133	0.867	0.655	0.067	0.933
	HapMap-JPT	Asian	90	IG		0.067	0.933		0.033	0.967
	HapMap-YRI	Sub-Saharan African	120	IG	0.050	0.250	0.700	0.317	0.175	0.825

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
	UNKNOWN	UNKNOWN	UNKNOWN