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BLASTX+BEAUTY Search Results

WU-BLAST 2.0 search of the National Center for Biotechnology Information's NR Protein Database.

BEAUTY post-processing provided by the Human Genome Sequencing Center, Baylor College of Medicine.

BEAUTY Reference:
Worley KC, Culpepper P, Wiese BA, Smith RF. BEAUTY-X: enhanced BLAST searches for DNA queries. Bioinformatics 1998;14(10):890-1. Abstract

Worley KC, Wiese BA, Smith RF. BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results. Genome Res 1995 Sep;5(2):173-84 Abstract 






processing output:
cycle 1
cycle 2
cycle 3
cycle 4

Repeat sequence:
   SW  perc perc perc  query             position in query    matching repeat        position in  repeat
score  div. del. ins.  sequence          begin  end (left)    repeat   class/family  begin  end (left)  ID

  207   0.0  0.0  0.0  A10C07_CONSENSUS    490  512    (0) +  (A)n     Simple_repeat     1   23    (0)      



Alignments:
207  0.00  0.00  0.00  A10C07_CONSENSUS  490  512  (0)  (A)n#Simple_repeat  1  23  (157)  5

  A10C07_CONSENSU    490 AAAAAAAAAAAAAAAAAAAAAAA 512    
                                                
  (A)n#Simple_rep      1 AAAAAAAAAAAAAAAAAAAAAAA 23

Transitions / transversions = 1.00 (0 / 0)
Gap_init rate = 0.00 (0 / 23), avg. gap size = 0.00 (0 / 0)  



Masked Sequence:
>A10C07_CONSENSUS
AATCCTAAAAAATCCCCAGGGGGGGGGTAANGGAANAAAAGGGATTTTTC
NATTTCCCCGGGGATGGGGAGGGNGGGGNTTTNTTTGGNGGNTCCNGGGG
GGGTGGCAAANTGGACAATGGTTGGGGNGATTTAATTTTNTTCAAGGAAC
ACAATNGGTCAGATGCTGNGTTGGGGATCCTTACCTTCAAATGGAGGCAT
GTTACAAAGATTTTGTTGGCGTTGAAAATGCTAAGATTGGGAAGTGTCCA
GNTAGAGCCAGAACAAACTTGGACAGCTGTGCAGCACCTTAGCATAGCTT
GAACTGTAAATGTGTTTNTAACATCAGCAATTATTTTTGTCATATTTGAN
ACCCCAACAAATATGTATNTTCTGTATTAATAATTTTNTATGCCACTACT
GTCGAGGGAAGGATAGTGTACAAGAGTTAAACCTCATTACATTCGTAACA
TTATCGTAACAACAATAAGGAATAATAATTTTCTTTTATNNNNNNNNNNN
NNNNNNNNNNNN



Summary:
==================================================
file name: /repeatmasker/tmp/RM2seq
sequences:            1
total length:       512 bp
GC level:         38.13 %
bases masked:        23 bp (  4.49 %)
==================================================
               number of      length   percentage
               elements*    occupied  of sequence
--------------------------------------------------
SINEs:                0            0 bp     0.00 %
      ALUs            0            0 bp     0.00 %
      MIRs            0            0 bp     0.00 %

LINEs:                0            0 bp     0.00 %
      LINE1           0            0 bp     0.00 %
      LINE2           0            0 bp     0.00 %
      L3/CR1          0            0 bp     0.00 %

LTR elements:         0            0 bp     0.00 %
      MaLRs           0            0 bp     0.00 %
      ERVL            0            0 bp     0.00 %
      ERV_classI      0            0 bp     0.00 %
      ERV_classII     0            0 bp     0.00 %

DNA elements:         0            0 bp     0.00 %
      MER1_type       0            0 bp     0.00 %
      MER2_type       0            0 bp     0.00 %

Unclassified:         0            0 bp     0.00 %

Total interspersed repeats:        0 bp     0.00 %


Small RNA:            0            0 bp     0.00 %

Satellites:           0            0 bp     0.00 %
Simple repeats:       1           23 bp     4.49 %
Low complexity:       0            0 bp     0.00 %
==================================================

* most repeats fragmented by insertions or deletions
  have been counted as one element

The sequence(s) were assumed to be of primate origin.
RepeatMasker version 07/16/2000               default
ProcessRepeats version 07/16/2000
Repbase version 03/31/2000




Reference:  Gish, Warren (1994-1997).  unpublished.
Gish, Warren and David J. States (1993).  Identification of protein coding
regions by database similarity search.  Nat. Genet. 3:266-72.


Notice:  statistical significance is estimated under the assumption that the
equivalent of one entire reading frame in the query sequence codes for protein
and that significant alignments will involve only coding reading frames.


Query=  A10C07_CONSENSUS
        (512 letters)

  Translating both strands of query sequence in all 6 reading frames


Database:  nr
           625,274 sequences; 197,782,623 total letters.


     Observed Numbers of Database Sequences Satisfying
    Various EXPECTation Thresholds (E parameter values)

        Histogram units:      = 9 Sequences     : less than 9 sequences

 EXPECTation Threshold
 (E parameter)
    |
    V   Observed Counts-->
  10000 2612 535 |===========================================================
   6310 2077 406 |=============================================
   3980 1671 351 |=======================================
   2510 1320 276 |==============================
   1580 1044 278 |==============================
   1000  766 176 |===================
    631  590 136 |===============
    398  454 107 |===========
    251  347  84 |=========
    158  263  74 |========
    100  189  49 |=====
   63.1  140  38 |====
   39.8  102  20 |==
   25.1   82  27 |===
   15.8   55  11 |=
 >>>>>>>>>>>>>>>>>>>>>  Expect = 10.0, Observed = 44  <<<<<<<<<<<<<<<<<
   10.0   44  10 |=
   6.31   34  11 |=
   3.98   23   4 |:
   2.51   19   3 |:
   1.58   16   3 |:
   1.00   13   5 |:
   0.63    8   2 |:
   0.40    6   1 |:
   0.25    5   0 |
   0.16    5   1 |:
   0.10    4   2 |:
  0.063    2   0 |
  0.040    2   1 |:
  0.025    1   0 |
  0.016    1   0 |
  0.010    1   0 |
 0.0063    1   1 |:


                                                                     Smallest
                                                                       Sum
                                                     Reading  High  Probability
Sequences producing High-scoring Segment Pairs:        Frame Score  P(N)      N
gi|10177534|dbj|BAB10929.1|(AB013389) apospory-associ... +3   102  0.0047    1
gi|7303644|gb|AAF58696.1|(AE003826) CG7738 gene produ... +2    80  0.026     1
gi|322757|pir||PQ0476pistil extensin-like protein (cl... -2    89  0.069     1
gi|19923|emb|CAA78394.1|(Z14016) pistil extensin like... -2    89  0.071     1
gi|322758|pir||PQ0477pistil extensin-like protein (cl... -2    74  0.14      1
gi|82091|pir||A25494hydroxyproline-rich glycoprotein ... -2    72  0.23      1
gi|100213|pir||S14972extensin class I (clone w6) - to... -2    69  0.44      1
gi|12597287|gb|AAG60016.1|(AF288572) FasL isoform [Mu... -3    70  0.45      2
gi|100214|pir||S14971extensin class I (clone wY) - to... -2    68  0.53      1
gi|2108256|emb|CAA73601.1|(Y13141) extensin [Bromhead... -2    68  0.53      1
gi|100216|pir||S14975extensin class II (clone uJ-2) -... -2    68  0.53      1
gi|930265|emb|CAA30706.1|(X07858) ORF (1 is 3rd base ... -2    68  0.53      1
gi|7488997|pir||S14973extensin class I (clone uG) - t... -2    67  0.63      1
gi|322749|pir||JQ1686extensin-like protein precursor ... -2    80  0.69      1
gi|7940276|gb|AAF70835.1|AC003113_2(AC003113) F24O1.6... -2    66  0.72      1
gi|7446487|pir||T06806proline rich protein homolog WC... -2    85  0.74      1
gi|7488996|pir||T07030extensin - tomato (fragment) >g... -2    65  0.81      1
gi|9633072ref|NP_050179.1| B2 [Human herpesvirus 6B] ... -2    65  0.81      1
gi|99861|pir||S20790extensin - almond >gi|20420|emb|C... -2    83  0.87      1
gi|4680497|gb|AAD27677.1|AF119222_9(AF119222) hypothe... -2    63  0.94      1
gi|9631626ref|NP_048405.1| contains Pro-rich Px motif... -2    85  0.95      1
gi|82087|pir||S19774glycine-rich protein - tomato (fr... +3    62  0.98      1
gi|1076601|pir||S49761structural cell wall protein - ... -2    62  0.98      1
gi|7442094|pir||T09964extensin CYC15 precursor - Mada... -2    79  0.99      1
gi|7485784|pir||T01630hypothetical protein F19F24.22 ... -3    61  0.992     1
gi|4008584|emb|CAA12281.1|(AJ224997) huntingtin [Ratt... -2    61  0.993     1
gi|639867|dbj|BAA07126.1|(D37884) choline kinase R [R... -2    71  0.993     1
gi|347457|gb|AAA33972.1|(L22031) hydroxyproline-rich ... -2    72  0.994     1
gi|12018149|gb|AAG45421.1|AF309495_1(AF309495) gamete... -2    81  0.997     1
gi|322759|pir||PQ0479pistil extensin-like protein (cl... -2    81  0.998     1
gi|5917666|gb|AAD55980.1|AF159297_1(AF159297) extensi... -2    86  0.998     1
gi|168457|gb|AAA33456.1|(M36913) cell wall protein (p... -2    70  0.998     1
gi|1296429|gb|AAB08703.1|(L77967) small proline-rich ... -3    60  0.998     1
gi|7487284|pir||T00523hypothetical protein T20K24.4 -... -3    60  0.998     1
gi|688080|gb|AAB31576.1|lectin=chitin-binding protein... -2    60  0.998     1
gi|10728514|gb|AAF46262.2|(AE003440) CG11368 gene pro... -2    60  0.998     1
gi|6523547|emb|CAB62280.1|(AJ242540) hydroxyproline-r... -2    81  0.998     1
gi|9711862|dbj|BAB07956.1|(AP002524) putative extensi... -2    82  0.9994    1
gi|7503170|pir||T31880hypothetical protein F41E6.11 -... -2    79  0.9995    1
gi|421940|pir||S33159pAP8 protein - common tobacco (f... -2    67  0.9996    1
gi|6755636ref|NP_035602.1| small proline-rich protein... -3    59  0.9997    1
gi|322747|pir||PQ0452extensin-like protein - Persian ... -2    71  0.9998    1
gi|6755638ref|NP_035603.1| small proline-rich protein... -2    59  0.9998    1
gi|4581107|gb|AAD24597.1|AC005825_4(AC005825) unknown... -2    79  0.9999    1



Locally-aligned regions (HSPs) with respect to query sequence:

Locus_ID                Frame 3 Hits
gi|10177534            |          ___________________                     
gi|82087               | ____________                                     
                        __________________________________________________
Query sequence:        |              |             |              |      | 171
                       0             50           100            150


Locus_ID                Frame 2 Hits
gi|10177534            |          ______________                          
gi|7303644             | ____________                                     
                        __________________________________________________
Query sequence:        |              |             |              |      | 171
                       0             50           100            150


Locus_ID                Frame -1 Hits
gi|12597287            |                      ______                      
                        __________________________________________________
Query sequence:        |              |             |              |      | 171
                       0             50           100            150


Locus_ID                Frame -2 Hits
gi|322757              | ____________                                     
gi|19923               | ____________                                     
gi|322758              | ____________                                     
gi|82091               | ____________                                     
gi|100213              | ____________                                     
gi|100214              | ____________                                     
gi|2108256             |_____________                                     
gi|100216              | ____________                                     
gi|930265              | ___________                                      
gi|7488997             | ____________                                     
gi|322749              | _____________                                    
gi|7940276             | ____________                                     
gi|7446487             |                                                  
gi|7488996             | ___________                                      
gi|9633072             |     ________                                     
gi|99861               | ____________                                     
gi|4680497             |     ____________                                 
gi|9631626             | _____________                                    
gi|1076601             |      _______                                     
gi|7442094             | ____________                                     
gi|4008584             | ___________                                      
gi|639867              |     _______                                      
gi|347457              | ____________                                     
gi|12018149            | ____________                                     
gi|322759              | ____________                                     
gi|5917666             | _____________                                    
gi|168457              | ____________                                     
gi|688080              |      _______                                     
gi|10728514            |  _____________                                   
gi|6523547             | ____________                                     
gi|9711862             |_____________                                     
gi|7503170             | ______________                                   
gi|421940              | ____________                                     
gi|322747              | _____________                                    
gi|6755638             | ______________                                   
gi|4581107             | ____________                                     
                        __________________________________________________
Query sequence:        |              |             |              |      | 171
                       0             50           100            150


Locus_ID                Frame -3 Hits
gi|12597287            | ___________                                      
gi|7485784             |    _____________                                 
gi|1296429             | ___________                                      
gi|7487284             |    __________                                    
gi|6755636             | ___________                                      
Prosite Hits:                               _______                       
                        __________________________________________________
Query sequence:        |              |             |              |      | 171
                       0             50           100            150
__________________
Prosite hits:
   LEUCINE_ZIPPER       Leucine zipper pattern.                  72..93
__________________




Use the  and  icons to retrieve links to Entrez:

E = Retrieve Entrez links (e.g., Medline abstracts, FASTA-formatted sequence reports).

R = Retrieve links to Related sequences (neighbors).

Use the  icon (if present) to retrieve links to the Sequence Retrieval System (SRS).

Use the  icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .

Use the  icon (if present) to retrieve links to the Protein Data Bank database.



to_Entrezto_Relatedto_Related >gi|10177534|dbj|BAB10929.1|  (AB013389) apospory-associated protein C-like
            [Arabidopsis thaliana]
            Length = 307

Frame  3 hits (HSPs):                                          ___________
Frame  2 hits (HSPs):                                          ________   
                        __________________________________________________
Database sequence:     |       |        |       |       |       |       | | 307
                       0      50      100     150     200     250     300

  Plus Strand HSPs:

 Score = 102 (35.9 bits), Expect = 0.0047, P = 0.0047
 Identities = 25/62 (40%), Positives = 34/62 (54%), Frame = +3

Query:   114 DNGWGDLIXFKEHNXSDAXLGILTFKWRHVTKILLALKMLRLGSVQXEPEQTWTAVQHLS 293
             DNG GD I  K  N SDA L     +     +  + ++  +LG V+ EP Q+WTA Q LS
Sbjct:   246 DNGLGDKIIIKNTNWSDAVLWNPHTQMEACYRDFVCVENAKLGDVKLEPGQSWTATQLLS 305

Query:   294 IA 299
             I+
Sbjct:   306 IS 307

 Score = 92 (32.4 bits), Expect = 0.14, P = 0.13
 Identities = 20/45 (44%), Positives = 26/45 (57%), Frame = +2

Query:   107 QXGQWLGXFNFXQGTQXVRCXVGDPYLQMEACYKDFVGVENAKIG 241
             Q    LG     + T      + +P+ QMEACY+DFV VENAK+G
Sbjct:   244 QFDNGLGDKIIIKNTNWSDAVLWNPHTQMEACYRDFVCVENAKLG 288


to_Entrezto_Relatedto_Related >gi|7303644|gb|AAF58696.1|  (AE003826) CG7738 gene product [Drosophila
            melanogaster]
            Length = 104

Frame  2 hits (HSPs):                             ________________________
                        __________________________________________________
Database sequence:     |         |        |         |        |         |  | 104
                       0        20       40        60       80       100

  Plus Strand HSPs:

 Score = 80 (28.2 bits), Expect = 0.026, P = 0.026
 Identities = 17/36 (47%), Positives = 19/36 (52%), Frame = +2

Query:    20 GGGXGXKGIFXFPRGWGGXGFXWXXXGGWQXGQWLG 127
             GGG G +G +    GWGG G  W   GGW  G W G
Sbjct:    57 GGGWGGRGGWGGRGGWGGRG-GWGGRGGWGGG-WGG 90

 Score = 69 (24.3 bits), Expect = 5.4, P = 1.0
 Identities = 16/40 (40%), Positives = 19/40 (47%), Frame = +2

Query:    23 GGXGXKGIFXFPRGWGGXGF---XWXXXGGW--QXGQWLG 127
             GG G +G +    GWGG G     W   GGW  + G W G
Sbjct:    64 GGWGGRGGWGGRGGWGGRGGWGGGWGGRGGWGGRGGGWYG 103


to_Entrezto_Relatedto_Related >gi|322757|pir||PQ0476  pistil extensin-like protein (clone pMG08) - common
            tobacco  (fragment)
            Length = 154

Frame -2 hits (HSPs):                                ___________________  
                        __________________________________________________
Database sequence:     |               |                |               | | 154
                       0              50              100             150

  Minus Strand HSPs:

 Score = 89 (31.3 bits), Expect = 0.071, P = 0.069
 Identities = 20/39 (51%), Positives = 21/39 (53%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPPL 17
             KSP PL  LPPP   P K PP P P   K P  S  PP+
Sbjct:    93 KSPPPL--LPPPPSQPPKQPPPPPPPPAKQP-PSAKPPI 128

 Score = 74 (26.0 bits), Expect = 7.8, P = 1.0
 Identities = 16/36 (44%), Positives = 17/36 (47%), Frame = -2

Query:   127 PQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             P P +  PP   PP K PPSPSP          TPP
Sbjct:   114 PPPPAKQPPSAKPPIK-PPSPSPAAQPPATQRATPP 148


to_Entrezto_Relatedto_Related >gi|19923|emb|CAA78394.1|  (Z14016) pistil extensin like protein, partial  CDS
            [Nicotiana tabacum]
            Length = 155

Frame -2 hits (HSPs):                                ___________________  
                        __________________________________________________
Database sequence:     |               |               |                | | 155
                       0              50             100              150

  Minus Strand HSPs:

 Score = 89 (31.3 bits), Expect = 0.073, P = 0.071
 Identities = 20/39 (51%), Positives = 21/39 (53%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPPL 17
             KSP PL  LPPP   P K PP P P   K P  S  PP+
Sbjct:    93 KSPPPL--LPPPPSQPPKQPPPPPPPPAKQP-PSAKPPI 128

 Score = 74 (26.0 bits), Expect = 8.0, P = 1.0
 Identities = 16/36 (44%), Positives = 17/36 (47%), Frame = -2

Query:   127 PQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             P P +  PP   PP K PPSPSP          TPP
Sbjct:   114 PPPPAKQPPSAKPPIK-PPSPSPAAQPPATQRATPP 148


to_Entrezto_Relatedto_Related >gi|322758|pir||PQ0477  pistil extensin-like protein (clone pMG09) - common
            tobacco  (fragment)
            Length = 80

Frame -2 hits (HSPs):        ___________________________________          
                        __________________________________________________
Database sequence:     |           |            |           |             | 80
                       0          20           40          60

  Minus Strand HSPs:

 Score = 74 (26.0 bits), Expect = 0.15, P = 0.14
 Identities = 16/36 (44%), Positives = 17/36 (47%), Frame = -2

Query:   127 PQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             P P +  PP   PP K PPSPSP          TPP
Sbjct:    30 PPPPAKQPPSAKPPIK-PPSPSPAAQPPATQRATPP 64

 Score = 68 (23.9 bits), Expect = 0.75, P = 0.53
 Identities = 14/30 (46%), Positives = 16/30 (53%), Frame = -2

Query:   106 PPPXXPPXKXPPSPSPG-KXKNPFXSXTPP 20
             PPP  PP K PPS  P  K  +P  +  PP
Sbjct:    27 PPPPPPPAKQPPSAKPPIKPPSPSPAAQPP 56

 Score = 64 (22.5 bits), Expect = 2.2, P = 0.89
 Identities = 14/38 (36%), Positives = 17/38 (44%), Frame = -2

Query:   130 SPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPPL 17
             +P P     PP   P K PP P P   + P  S  PP+
Sbjct:     9 TPPPAMQRAPPLSQPPKPPPPPPPPAKQPP--SAKPPI 44


to_Entrezto_Relatedto_Related >gi|82091|pir||A25494  hydroxyproline-rich glycoprotein - tomato (fragment)
            >gi|170454|gb|AAA34170.1| (M11759) cell wall hydroxyproline-rich
            glycoprotein [Lycopersicon esculentum] >gi|224726|prf||1111324A
            glycoprotein,Hyp rich [Lycopersicon esculentum]
            Length = 93

Frame -2 hits (HSPs):   ___________________                               
                        __________________________________________________
Database sequence:     |          |         |          |          |       | 93
                       0         20        40         60         80

  Minus Strand HSPs:

 Score = 72 (25.3 bits), Expect = 0.26, P = 0.23
 Identities = 16/38 (42%), Positives = 17/38 (44%), Frame = -2

Query:   130 SPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPPL 17
             SP P   LPPP  PP   PP P       P  S  PP+
Sbjct:     1 SPPPPKTLPPP--PPKTSPPPPVHSPPPPPVASPPPPV 36


to_Entrezto_Relatedto_Related >gi|100213|pir||S14972  extensin class I (clone w6) - tomato
            >gi|1345536|emb|CAA39214.1| (X55683) extensin (class I)
            [Lycopersicon esculentum]
            Length = 90

Frame -2 hits (HSPs):         ______________________________________      
Annotated Domains:         _______________________________________________
                        __________________________________________________
Database sequence:     |          |          |          |          |      | 90
                       0         20         40         60         80
__________________

Annotated Domains:
   DOMO                 DM00215: PROLINE-RICHPROTEIN3            7..90
__________________


  Minus Strand HSPs:

 Score = 69 (24.3 bits), Expect = 0.58, P = 0.44
 Identities = 17/38 (44%), Positives = 19/38 (50%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             KSP P S  PPP     K PP PSP     P+   +PP
Sbjct:    13 KSPPPPSPSPPPPYV-YKSPPPPSPSPPP-PYVYKSPP 48

 Score = 69 (24.3 bits), Expect = 0.58, P = 0.44
 Identities = 17/38 (44%), Positives = 19/38 (50%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             KSP P S  PPP     K PP PSP     P+   +PP
Sbjct:    45 KSPPPPSHSPPPPYY-YKSPPPPSPSPPP-PYYYKSPP 80


to_Entrezto_Relatedto_Related >gi|12597287|gb|AAG60016.1|  (AF288572) FasL isoform [Mus musculus]
            Length = 131

Frame -1 hits (HSPs):     _______                                         
Frame -3 hits (HSPs):              ___________                            
                        __________________________________________________
Database sequence:     |                  |                  |            | 131
                       0                 50                100

  Minus Strand HSPs:

 Score = 70 (24.6 bits), Expect = 0.59, Sum P(2) = 0.45
 Identities = 15/33 (45%), Positives = 15/33 (45%), Frame = -3

Query:   117 CPXCHPPXXXQXXPXPPHPRGNXKIPFXPLPPP 19
             CP C P    Q  P PP P      P  PLPPP
Sbjct:    32 CPSCGPRGPDQRRPPPPPP------PVSPLPPP 58

 Score = 39 (13.7 bits), Expect = 0.59, Sum P(2) = 0.45
 Identities = 5/16 (31%), Positives = 9/16 (56%), Frame = -1

Query:   281 HSCPSLFWLXLDTSQS 234
             + CP +FW+    + S
Sbjct:     7 YPCPQIFWVDSSATSS 22


to_Entrezto_Relatedto_Related >gi|100214|pir||S14971  extensin class I (clone wY) - tomato
            >gi|1345535|emb|CAA39213.1| (X55682) extensin (class I)
            [Lycopersicon esculentum]
            Length = 67

Frame -2 hits (HSPs):     _______________________________________         
                        __________________________________________________
Database sequence:     |              |              |              |     | 67
                       0             20             40             60

  Minus Strand HSPs:

 Score = 68 (23.9 bits), Expect = 0.75, P = 0.53
 Identities = 17/38 (44%), Positives = 19/38 (50%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             KSP P S  PPP     K PP PSP     P+   +PP
Sbjct:     4 KSPPPPSPSPPPPYY-YKSPPPPSPSPPP-PYYYKSPP 39

 Score = 68 (23.9 bits), Expect = 0.75, P = 0.53
 Identities = 17/38 (44%), Positives = 19/38 (50%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             KSP P S  PPP     K PP PSP     P+   +PP
Sbjct:    20 KSPPPPSPSPPPPYY-YKSPPPPSPSPPP-PYYYKSPP 55


to_Entrezto_Relatedto_Related >gi|2108256|emb|CAA73601.1|  (Y13141) extensin [Bromheadia finlaysoniana]
            Length = 71

Frame -2 hits (HSPs):   _______________________________________________   
                        __________________________________________________
Database sequence:     |             |             |             |        | 71
                       0            20            40            60

  Minus Strand HSPs:

 Score = 68 (23.9 bits), Expect = 0.75, P = 0.53
 Identities = 17/38 (44%), Positives = 19/38 (50%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             KSP P S  PPP     K PP PSP     P+   +PP
Sbjct:    15 KSPPPPSPSPPPPYY-YKSPPPPSPSPPP-PYYYKSPP 50

 Score = 64 (22.5 bits), Expect = 2.2, P = 0.89
 Identities = 16/38 (42%), Positives = 16/38 (42%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             KSP P S  PPP     K PP P P        S  PP
Sbjct:    31 KSPPPPSPSPPPPYY-YKSPPPPPPSPPPTYIYSSPPP 67

 Score = 61 (21.5 bits), Expect = 4.9, P = 0.99
 Identities = 18/48 (37%), Positives = 19/48 (39%), Frame = -2

Query:   133 KSPQPLSXLPPPXX------PPXKXPPSPSPGKXKNPFXSXTPPLGIF 8
             KSP P S  PPP        PP   PP P   K   P     PP  I+
Sbjct:    15 KSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPPPSPPPTYIY 62

 Score = 60 (21.1 bits), Expect = 6.4, P = 1.0
 Identities = 14/36 (38%), Positives = 16/36 (44%), Frame = -2

Query:   127 PQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             P P    PPP       PPSPSP     P+   +PP
Sbjct:     2 PPPSPSPPPPYYYKSPPPPSPSPPP---PYYYKSPP 34


to_Entrezto_Relatedto_Related >gi|100216|pir||S14975  extensin class II (clone uJ-2) - tomato
            >gi|1345538|emb|CAA39216.1| (X55686) extensin (class II)
            [Lycopersicon esculentum]
            Length = 82

Frame -2 hits (HSPs):             _______________________                 
Annotated Domains:            ____________________________________________
                        __________________________________________________
Database sequence:     |           |           |           |            | | 82
                       0          20          40          60           80
__________________

Annotated Domains:
   DOMO                 DM05291:                                 12..82
__________________


  Minus Strand HSPs:

 Score = 68 (23.9 bits), Expect = 0.75, P = 0.53
 Identities = 15/37 (40%), Positives = 16/37 (43%), Frame = -2

Query:   130 SPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             SP P S  PPP       PP PSP      + S  PP
Sbjct:    18 SPPPPSPSPPPPTYYYSSPPPPSPSPPPPTYSSPPPP 54


to_Entrezto_Relatedto_Related >gi|930265|emb|CAA30706.1|  (X07858) ORF (1 is 3rd base in codon) (266 is 1st
            base in codon) [Saccharomyces cerevisiae]
            Length = 88

Frame -2 hits (HSPs):                            ___________________      
                        __________________________________________________
Database sequence:     |          |           |          |          |     | 88
                       0         20          40         60         80

  Minus Strand HSPs:

 Score = 68 (23.9 bits), Expect = 0.75, P = 0.53
 Identities = 13/34 (38%), Positives = 16/34 (47%), Frame = -2

Query:   121 PLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             P +  PPP  P    PP P P + + P    TPP
Sbjct:    45 PQAEAPPPAPPQADAPPLPWPPQVEAPPHEETPP 78


to_Entrezto_Relatedto_Related >gi|7488997|pir||S14973  extensin class I (clone uG) - tomato (fragment)
            >gi|4467884|emb|CAB37844.1| (X55684) extensin (class I)
            [Lycopersicon esculentum]
            Length = 75

Frame -2 hits (HSPs):     _______________________________________         
                        __________________________________________________
Database sequence:     |            |             |            |          | 75
                       0           20            40           60

  Minus Strand HSPs:

 Score = 67 (23.6 bits), Expect = 0.99, P = 0.63
 Identities = 17/42 (40%), Positives = 18/42 (42%), Frame = -2

Query:   130 SPQPL--SXLPPPXXPP---XKXPPSPSPGKXKNPFXSXTPP 20
             SP P      PPP  PP    K PP PSP      + S  PP
Sbjct:     4 SPPPYYYKSPPPPSPPPPYYYKSPPPPSPSPPPPYYYSSPPP 45

 Score = 64 (22.5 bits), Expect = 2.2, P = 0.89
 Identities = 18/38 (47%), Positives = 20/38 (52%), Frame = -2

Query:   133 KSPQPLSXLPPP----XXPPXKXPPSPSPGKXKNPFXSXTPP 20
             KSP P S  PPP      PP   PP PSP     P+   +PP
Sbjct:    25 KSPPPPSPSPPPPYYYSSPP---PPKPSPPP---PYYYSSPP 60

 Score = 61 (21.5 bits), Expect = 4.9, P = 0.99
 Identities = 15/38 (39%), Positives = 16/38 (42%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             KSP P S  PPP       PP P P      + S  PP
Sbjct:    25 KSPPPPSPSPPPPYY-YSSPPPPKPSPPPPYYYSSPPP 61


to_Entrezto_Relatedto_Related >gi|322749|pir||JQ1686  extensin-like protein precursor - Persian tobacco
            (strain S6S6) >gi|258215|gb|AAB23813.1| (S48582) NaPRP3=putative
            proline-rich protein [Nicotiana alata, style, Peptide, 151 aa]
            Length = 151

Frame -2 hits (HSPs):                            ____________             
Annotated Domains:      ____________________                              
                        __________________________________________________
Database sequence:     |                |               |                || 151
                       0               50             100              150
__________________

Annotated Domains:
   DOMO                 DM05812:                                 1..61
   Entrez               domain: signal sequence                  1..21
__________________


  Minus Strand HSPs:

 Score = 80 (28.2 bits), Expect = 1.2, P = 0.69
 Identities = 20/39 (51%), Positives = 21/39 (53%), Frame = -2

Query:   136 IKSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             +KSP P S  PPP  PP   PPSPSP     P  S  PP
Sbjct:    79 VKSPPPPSPSPPPPSPP---PPSPSPPP---PSPSPPPP 111

 Score = 79 (27.8 bits), Expect = 1.6, P = 0.80
 Identities = 20/39 (51%), Positives = 22/39 (56%), Frame = -2

Query:   136 IKSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             +KSP P S  PPP  PP   PPSPSP     P  S +PP
Sbjct:    79 VKSPPPPSPSPPPPSPP---PPSPSP-----PPPSPSPP 109


to_Entrezto_Relatedto_Related >gi|7940276|gb|AAF70835.1|AC003113_2  (AC003113) F24O1.6 [Arabidopsis thaliana]
            Length = 70

Frame -2 hits (HSPs):        __________________________________________   
                        __________________________________________________
Database sequence:     |             |             |              |       | 70
                       0            20            40             60

  Minus Strand HSPs:

 Score = 66 (23.2 bits), Expect = 1.3, P = 0.72
 Identities = 15/37 (40%), Positives = 15/37 (40%), Frame = -2

Query:   127 PQPLSXLPPPXXPPXKXPPSPSPGKXKNP-FXSXTPP 20
             P P    PPP  PP   PP P PG    P      PP
Sbjct:    30 PPPPGPQPPPPPPPRPDPPPPLPGATWFPGLLGPRPP 66

 Score = 59 (20.8 bits), Expect = 8.4, P = 1.0
 Identities = 16/44 (36%), Positives = 18/44 (40%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXK-XPPSPSPGKXKNP----FXSXTPPL 17
             + P P    PPP  PP +  PP P PG    P         PPL
Sbjct:     8 RHPPPFHHPPPPRPPPPEPRPPPPPPGPQPPPPPPPRPDPPPPL 51


to_Entrezto_Relatedto_Related >gi|7446487|pir||T06806  proline rich protein homolog WCOR518 - wheat (fragment)
            >gi|1657851|gb|AAB18205.1| (U73214) cold acclimation protein
            WCOR518 [Triticum aestivum]
            Length = 315

Frame -2 hits (HSPs):                    _______________                  
                        __________________________________________________
Database sequence:     |       |       |       |       |       |       |  | 315
                       0      50     100     150     200     250     300

  Minus Strand HSPs:

 Score = 85 (29.9 bits), Expect = 1.4, P = 0.74
 Identities = 27/90 (30%), Positives = 37/90 (41%), Frame = -2

Query:   289 RCCTAVQVCSG-----SXWTLPNLSIFNANKIFVTCLHLKVRIPNXASDXLCSLXKIKSP 125
             +CC  +   +G        T   L   N N +    + + V   N     + S  +  +P
Sbjct:   113 KCCPLLSGVTGLDAALCLCTTIELKALNINLVLPIAIQVLV---NQCGKTVPSDFQCPAP 169

Query:   124 QPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
              P +  P P  PP   PPSPSP     P  S TPP
Sbjct:   170 TPATPPPTPAVPPSPVPPSPSPPTPVTP--SPTPP 202


to_Entrezto_Relatedto_Related >gi|7488996|pir||T07030  extensin - tomato (fragment) >gi|575950|emb|CAA86660.1|
            (Z46675) extensin [Lycopersicon esculentum]
            Length = 42

Frame -2 hits (HSPs):   ____________________________________________      
                        __________________________________________________
Database sequence:     |                      |                       |   | 42
                       0                     20                      40

  Minus Strand HSPs:

 Score = 65 (22.9 bits), Expect = 1.7, P = 0.81
 Identities = 14/37 (37%), Positives = 17/37 (45%), Frame = -2

Query:   121 PLSXLPPPXXPPXKXPPSPSPGKXKNP---FXSXTPP 20
             P   LPPP  P  K PP P+P     P   +   +PP
Sbjct:     1 PSYKLPPPPTPIYKSPPPPTPAYNSPPPPYYLYTSPP 37


to_Entrezto_Related >gi|9633072  ref|NP_050179.1| B2 [Human herpesvirus 6B] >gi|9633166
            ref|NP_050276.1| B2 [Human herpesvirus 6B] >gi|11346469|pir||T44145
            B2 protein [imported] - human herpesvirus 6 (strain Z29)
            >gi|5733513|gb|AAD49616.1|AF157706_3 (AF157706) B2 [Human
            herpesvirus 6B] >gi|5733582|gb|AAD49685.1|AF157706_106 (AF157706)
            B2 [Human herpesvirus 6B]
            Length = 79

Frame -2 hits (HSPs):                         ________________            
                        __________________________________________________
Database sequence:     |            |           |            |            | 79
                       0           20          40           60

  Minus Strand HSPs:

 Score = 65 (22.9 bits), Expect = 1.7, P = 0.81
 Identities = 13/25 (52%), Positives = 14/25 (56%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSP 59
             KSP+ L    PP  P    PPSPSP
Sbjct:    36 KSPERLHGNAPPTPPRSPLPPSPSP 60


to_Entrezto_Relatedto_Related >gi|99861|pir||S20790  extensin - almond >gi|20420|emb|CAA46634.1| (X65718)
            extensin [Prunus dulcis] >gi|445616|prf||1909363A extensin [Prunus
            dulcis]
            Length = 278

Frame -2 hits (HSPs):                   ________________                  
                        __________________________________________________
Database sequence:     |        |        |        |        |        |     | 278
                       0       50      100      150      200      250

  Minus Strand HSPs:

 Score = 83 (29.2 bits), Expect = 2.0, P = 0.87
 Identities = 17/38 (44%), Positives = 20/38 (52%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             KSP P S  PP      K PP PSP   K+P+   +PP
Sbjct:   107 KSPPPPSPSPPKHPYHYKSPPPPSPSPPKHPYHYKSPP 144

 Score = 83 (29.2 bits), Expect = 2.0, P = 0.87
 Identities = 17/38 (44%), Positives = 20/38 (52%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             KSP P S  PP      K PP PSP   K+P+   +PP
Sbjct:   124 KSPPPPSPSPPKHPYHYKSPPPPSPSPPKHPYHYKSPP 161

 Score = 83 (29.2 bits), Expect = 2.0, P = 0.87
 Identities = 17/38 (44%), Positives = 20/38 (52%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             KSP P S  PP      K PP PSP   K+P+   +PP
Sbjct:   141 KSPPPPSPSPPKHPYHYKSPPPPSPSPPKHPYHYKSPP 178

 Score = 78 (27.5 bits), Expect = 8.5, P = 1.0
 Identities = 16/38 (42%), Positives = 19/38 (50%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             KSP P    PP      K PP PSP   K+P+   +PP
Sbjct:    90 KSPPPPVYSPPKHPYHYKSPPPPSPSPPKHPYHYKSPP 127


to_Entrezto_Relatedto_Related >gi|4680497|gb|AAD27677.1|AF119222_9  (AF119222) hypothetical protein [Oryza
            sativa]
            Length = 86

Frame -2 hits (HSPs):         _________________________                   
                        __________________________________________________
Database sequence:     |           |          |           |          |    | 86
                       0          20         40          60         80

  Minus Strand HSPs:

 Score = 63 (22.2 bits), Expect = 2.9, P = 0.94
 Identities = 18/42 (42%), Positives = 21/42 (50%), Frame = -2

Query:   175 PNXASDXL-CSLXKIKSPQPL--SXLPPPXXPPXKX-PPSPSP 59
             P   S  L C+L  +  P PL     PPP  PP +  PP PSP
Sbjct:    13 PRRVSAALGCTLA-MPPPPPLPHQRQPPPPPPPRRRQPPPPSP 54


to_Entrezto_Related >gi|9631626  ref|NP_048405.1| contains Pro-rich Px motifs: SPKPP (20X), PEPPA
            (9X); similar to soybean pro-rich cell wall protein, corresponds to
            Swiss-Prot Accession Number P13993 [Paramecium bursaria Chlorella
            virus 1] >gi|7461884|pir||T17547 proline-rich protein A57R -
            Chlorella virus PBCV-1 >gi|624076|gb|AAC96425.1| (U42580) contains
            Pro-rich Px motifs: SPKPP (20X), PEPPA (9X); similar to soybean
            pro-rich cell wall protein, corresponds to Swiss-Prot Accession
            Number P13993 [Paramecium bursaria Chlorella virus 1]
            Length = 544

Frame -2 hits (HSPs):    ___________                                      
                        __________________________________________________
Database sequence:     |             |             |             |        | 544
                       0           150           300           450

  Minus Strand HSPs:

 Score = 85 (29.9 bits), Expect = 2.9, P = 0.95
 Identities = 28/69 (40%), Positives = 30/69 (43%), Frame = -2

Query:   226 FNANKIFVTCLHLKVRIPNXASDXLCSLXKIKSPQPLSXLPPPXXPPXKXPPSPSPGKXK 47
             F  N+I VT     V  P   S    S  K  SP+P S  PP   PP   PPSP P   K
Sbjct:    22 FTTNQI-VTTQTTVVNSPKPPSPKPPS-PKPPSPKPPSPKPPSPKPPSPKPPSPKPPSPK 79

Query:    46 NPFXSXTPP 20
              P  S  PP
Sbjct:    80 PP--SPKPP 86

 Score = 81 (28.5 bits), Expect = 9.4, P = 1.0
 Identities = 19/40 (47%), Positives = 20/40 (50%), Frame = -2

Query:   139 KIKSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             K  SP+P S  PP   PP   PPSP P   K P  S  PP
Sbjct:    39 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPP--SPKPP 76

 Score = 81 (28.5 bits), Expect = 9.4, P = 1.0
 Identities = 19/40 (47%), Positives = 20/40 (50%), Frame = -2

Query:   139 KIKSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             K  SP+P S  PP   PP   PPSP P   K P  S  PP
Sbjct:    54 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPP--SPKPP 91

 Score = 81 (28.5 bits), Expect = 9.4, P = 1.0
 Identities = 19/40 (47%), Positives = 20/40 (50%), Frame = -2

Query:   139 KIKSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             K  SP+P S  PP   PP   PPSP P   K P  S  PP
Sbjct:    64 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPP--SPKPP 101

 Score = 81 (28.5 bits), Expect = 9.4, P = 1.0
 Identities = 19/40 (47%), Positives = 20/40 (50%), Frame = -2

Query:   139 KIKSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             K  SP+P S  PP   PP   PPSP P   K P  S  PP
Sbjct:    74 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPP--SPKPP 111

 Score = 81 (28.5 bits), Expect = 9.4, P = 1.0
 Identities = 19/40 (47%), Positives = 20/40 (50%), Frame = -2

Query:   139 KIKSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             K  SP+P S  PP   PP   PPSP P   K P  S  PP
Sbjct:    84 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPP--SPKPP 121

 Score = 81 (28.5 bits), Expect = 9.4, P = 1.0
 Identities = 19/40 (47%), Positives = 20/40 (50%), Frame = -2

Query:   139 KIKSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             K  SP+P S  PP   PP   PPSP P   K P  S  PP
Sbjct:    89 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPP--SPKPP 126

 Score = 81 (28.5 bits), Expect = 9.4, P = 1.0
 Identities = 19/40 (47%), Positives = 20/40 (50%), Frame = -2

Query:   139 KIKSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             K  SP+P S  PP   PP   PPSP P   K P  S  PP
Sbjct:    94 KPPSPKPPSPKPPSPKPPSPKPPSPKPPSPKPP--SPKPP 131


to_Entrezto_Relatedto_Related >gi|82087|pir||S19774  glycine-rich protein - tomato (fragment)
            >gi|19322|emb|CAA42538.1| (X59883) glycine-rich protein
            [Lycopersicon esculentum]
            Length = 82

Frame  3 hits (HSPs):            ______________________                   
                        __________________________________________________
Database sequence:     |           |           |           |            | | 82
                       0          20          40          60           80

  Plus Strand HSPs:

 Score = 62 (21.8 bits), Expect = 3.7, P = 0.98
 Identities = 13/36 (36%), Positives = 18/36 (50%), Frame = +3

Query:    21 GGVXEXKGFFXFPGDGEGGXXFGGSXGGGKXDNGWG 128
             GG     G+     +G GG   GG  GGG+ + G+G
Sbjct:    16 GGYGGGGGYGGGRREGGGGGYGGGGYGGGRREGGYG 51


to_Entrezto_Relatedto_Related >gi|1076601|pir||S49761  structural cell wall protein - tomato (fragment)
            >gi|575952|emb|CAA86659.1| (Z46674) extensin [Lycopersicon
            esculentum]
            Length = 80

Frame -2 hits (HSPs):           _____________                             
                        __________________________________________________
Database sequence:     |           |            |           |             | 80
                       0          20           40          60

  Minus Strand HSPs:

 Score = 62 (21.8 bits), Expect = 3.7, P = 0.98
 Identities = 11/21 (52%), Positives = 12/21 (57%), Frame = -2

Query:   127 PQPLSXLPPPXXPPXKXPPSP 65
             P P+   PPP  P  K PPSP
Sbjct:    14 PTPVYKSPPPPTPVYKSPPSP 34


to_Entrezto_Relatedto_Related >gi|7442094|pir||T09964  extensin CYC15 precursor - Madagascar periwinkle
            >gi|1486263|dbj|BAA13175.1| (D86853) extensin [Catharanthus roseus]
            Length = 225

Frame -2 hits (HSPs):                                 _________           
                        __________________________________________________
Database sequence:     |          |           |          |          |     | 225
                       0         50         100        150        200

  Minus Strand HSPs:

 Score = 79 (27.8 bits), Expect = 4.3, P = 0.99
 Identities = 19/39 (48%), Positives = 22/39 (56%), Frame = -2

Query:   133 KSPQP---LSXLPPPXXPPX-KXPPSPSPGKXKNPFXSXTPP 20
             KSP P   +   PPP  PP  K PPSP P   K P+   +PP
Sbjct:   138 KSPPPPPSVHKYPPPSPPPVYKSPPSPPP---KKPYKYKSPP 176


to_Entrezto_Relatedto_Related >gi|7485784|pir||T01630  hypothetical protein F19F24.22 - Arabidopsis thaliana
            >gi|3176704|gb|AAD12020.1| (AC002392) hypothetical protein
            [Arabidopsis thaliana]
            Length = 73

Frame -3 hits (HSPs):                 ________________________________    
                        __________________________________________________
Database sequence:     |             |            |             |         | 73
                       0            20           40            60

  Minus Strand HSPs:

 Score = 61 (21.5 bits), Expect = 4.8, P = 0.99
 Identities = 18/46 (39%), Positives = 21/46 (45%), Frame = -3

Query:   177 SPTQHLTXCVP*XKLNXPNHCPXCHPPXXXQXXPXPPHP--RGNXKI 43
             S  +HL   V   K   PN  P C+PP   Q  P P +   RG  KI
Sbjct:    22 SRRKHLDYGVI-TKCAGPNPPPGCYPPGAQQKNPTPANEYRRGCSKI 67


to_Entrezto_Relatedto_Related >gi|4008584|emb|CAA12281.1|  (AJ224997) huntingtin [Rattus norvegicus]
            Length = 67

Frame -2 hits (HSPs):                    _________________________        
                        __________________________________________________
Database sequence:     |              |              |              |     | 67
                       0             20             40             60

  Minus Strand HSPs:

 Score = 61 (21.5 bits), Expect = 4.9, P = 0.99
 Identities = 15/36 (41%), Positives = 15/36 (41%), Frame = -2

Query:   124 QPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPPL 17
             QP    PPP  PP   PP P P     P     PPL
Sbjct:    25 QPPPQAPPPPPPPPPQPPQPPPQGQPPP----PPPL 56


to_Entrezto_Relatedto_Related >gi|639867|dbj|BAA07126.1|  (D37884) choline kinase R [Rattus norvegicus]
            Length = 112

Frame -2 hits (HSPs):                         __________                  
                        __________________________________________________
Database sequence:     |                     |                      |     | 112
                       0                    50                    100

  Minus Strand HSPs:

 Score = 71 (25.0 bits), Expect = 5.0, P = 0.99
 Identities = 14/22 (63%), Positives = 15/22 (68%), Frame = -2

Query:   124 QPLSXLPPPXXPPXKXPPSPSP 59
             QPL+ LPPP  PP   PP PSP
Sbjct:    52 QPLA-LPPPPPPPLPLPPPPSP 72


to_Entrezto_Relatedto_Related >gi|347457|gb|AAA33972.1|  (L22031) hydroxyproline-rich glycoprotein [Glycine
            max]
            Length = 118

Frame -2 hits (HSPs):                           _______________           
                        __________________________________________________
Database sequence:     |                    |                    |        | 118
                       0                   50                  100

  Minus Strand HSPs:

 Score = 72 (25.3 bits), Expect = 5.1, P = 0.99
 Identities = 17/38 (44%), Positives = 20/38 (52%), Frame = -2

Query:   133 KSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             KSP P S  PPP     K PP PSP    +P+   +PP
Sbjct:    58 KSPPPPSPSPPPPYV-YKSPPPPSPSP-PSPYYYKSPP 93


to_Entrezto_Relatedto_Related >gi|12018149|gb|AAG45421.1|AF309495_1  (AF309495) gamete-specific
            hydroxyproline-rich glycoprotein a2 [Chlamydomonas reinhardtii]
            Length = 386

Frame -2 hits (HSPs):                       _____ _____                   
                        __________________________________________________
Database sequence:     |                   |                  |           | 386
                       0                 150                300

  Minus Strand HSPs:

 Score = 81 (28.5 bits), Expect = 6.0, P = 1.0
 Identities = 18/37 (48%), Positives = 19/37 (51%), Frame = -2

Query:   130 SPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             SP P S LPP   PP   PPSP+P     P  S  PP
Sbjct:   159 SPAPPSPLPPSPVPPSPAPPSPAPPSPAPP--SPAPP 193

 Score = 80 (28.2 bits), Expect = 7.8, P = 1.0
 Identities = 18/37 (48%), Positives = 18/37 (48%), Frame = -2

Query:   130 SPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             SP P S LPP   PP   PPSP P     P  S  PP
Sbjct:   204 SPAPPSPLPPSPAPPSPAPPSPEPPSPAPP--SPEPP 238


to_Entrezto_Relatedto_Related >gi|322759|pir||PQ0479  pistil extensin-like protein (clone pMG14) - common
            tobacco  (fragment) >gi|19927|emb|CAA78393.1| (Z14015) pistil
            extensin like protein [Nicotiana tabacum]
            Length = 393

Frame -2 hits (HSPs):                  _____                              
Annotated Domains:                                         _              
                        __________________________________________________
Database sequence:     |                  |                   |           | 393
                       0                150                 300
__________________

Annotated Domains:
   Entrez               binding site: carbohydrate (Asn) (covale 280
__________________


  Minus Strand HSPs:

 Score = 81 (28.5 bits), Expect = 6.1, P = 1.0
 Identities = 16/37 (43%), Positives = 18/37 (48%), Frame = -2

Query:   130 SPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             SP   S   PP  PP K PP P P K  +P  +  PP
Sbjct:   122 SPPDQSTKQPPPPPPSKQPPPPPPVKASSPSPAKQPP 158


to_Entrezto_Relatedto_Related >gi|5917666|gb|AAD55980.1|AF159297_1  (AF159297) extensin-like protein [Zea
            mays]
            Length = 1315

Frame -2 hits (HSPs):                           __                        
                        __________________________________________________
Database sequence:     |                  |                  |            | 1315
                       0                500               1000

  Minus Strand HSPs:

 Score = 86 (30.3 bits), Expect = 6.2, P = 1.0
 Identities = 19/40 (47%), Positives = 23/40 (57%), Frame = -2

Query:   136 IKSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSX--TPP 20
             +KSP PL+ +  P  PP K PP P+PGK   P      TPP
Sbjct:   637 VKSPPPLAPVSSPS-PPVKLPPLPAPGKSTPPPEEEKPTPP 676


to_Entrezto_Relatedto_Related >gi|168457|gb|AAA33456.1|  (M36913) cell wall protein (put.); putative [Zea
            mays]
            Length = 109

Frame -2 hits (HSPs):                              __________________     
                        __________________________________________________
Database sequence:     |        |        |         |        |        |    | 109
                       0       20       40        60       80      100

  Minus Strand HSPs:

 Score = 70 (24.6 bits), Expect = 6.2, P = 1.0
 Identities = 15/39 (38%), Positives = 20/39 (51%), Frame = -2

Query:   130 SPQPLSXLPPPXXP-PXKXPPSPSPGKXKNPFXSXTPPL 17
             SP+P +  PP   P P    P+P P   K P  + TPP+
Sbjct:    60 SPKPPATKPPTPKPTPPTYTPTPKPPATKPPTYTPTPPV 98


to_Entrezto_Relatedto_Related >gi|1296429|gb|AAB08703.1|  (L77967) small proline-rich protein with paired
            repeat [Ovis aries]
            Length = 77

Frame -3 hits (HSPs):                        _______________________      
                        __________________________________________________
Database sequence:     |            |            |            |           | 77
                       0           20           40           60

  Minus Strand HSPs:

 Score = 60 (21.1 bits), Expect = 6.3, P = 1.0
 Identities = 16/37 (43%), Positives = 16/37 (43%), Frame = -3

Query:   126 PNHCP-XCHPPXXXQXXPXPPHPRGNXKIPFXPLPPPW 16
             P  CP  CH P      P PP P    K P  P  PPW
Sbjct:    34 PKVCPPKCHEPCPPP--PCPP-PVSQQKCPPGPPCPPW 68


to_Entrezto_Relatedto_Related >gi|7487284|pir||T00523  hypothetical protein T20K24.4 - Arabidopsis thaliana
            >gi|3176705|gb|AAD12021.1| (AC002392) hypothetical protein
            [Arabidopsis thaliana]
            Length = 72

Frame -3 hits (HSPs):                         ________________________    
                        __________________________________________________
Database sequence:     |             |             |            |         | 72
                       0            20            40           60

  Minus Strand HSPs:

 Score = 60 (21.1 bits), Expect = 6.3, P = 1.0
 Identities = 14/34 (41%), Positives = 16/34 (47%), Frame = -3

Query:   138 KLNXPNHCPXCHPPXXXQXXPXP--PHPRGNXKI 43
             K   PN  P C+PP   Q  P P   + RG  KI
Sbjct:    33 KCAGPNPPPGCNPPGAEQKNPTPVNEYSRGCSKI 66


to_Entrezto_Related >gi|688080|gb|AAB31576.1|  lectin=chitin-binding protein [Solanum
            tuberosum=potatoes, tubers, Peptide Partial, 27 aa]
            Length = 27

Frame -2 hits (HSPs):            _______________________________________  
                        __________________________________________________
Database sequence:     |                                   |              | 27
                       0                                  20

  Minus Strand HSPs:

 Score = 60 (21.1 bits), Expect = 6.4, P = 1.0
 Identities = 11/21 (52%), Positives = 11/21 (52%), Frame = -2

Query:   127 PQPLSXLPPPXXPPXKXPPSP 65
             P P    PPP  PP   PPSP
Sbjct:     6 PPPPHPSPPPPSPPSPPPPSP 26


to_Entrezto_Relatedto_Related >gi|10728514|gb|AAF46262.2|  (AE003440) CG11368 gene product [Drosophila
            melanogaster]
            Length = 65

Frame -2 hits (HSPs):              ___________________________________    
                        __________________________________________________
Database sequence:     |              |               |              |    | 65
                       0             20              40             60

  Minus Strand HSPs:

 Score = 60 (21.1 bits), Expect = 6.4, P = 1.0
 Identities = 18/45 (40%), Positives = 19/45 (42%), Frame = -2

Query:   154 LCSLXKIKSPQPLSXLPPPXXPPXKXP-PS-PSPGKXKNPFXSXT 26
             LCS   +  PQ     PPP   P   P PS P PG    P  S T
Sbjct:    16 LCSSFAVAYPQGPGCGPPPSGTPPSGPRPSGPPPGGRCGPPPSTT 60


to_Entrezto_Relatedto_Related >gi|6523547|emb|CAB62280.1|  (AJ242540) hydroxyproline-rich glycoprotein DZ-HRGP
            [Volvox carteri f. nagariensis]
            Length = 409

Frame -2 hits (HSPs):                                  _____________      
                        __________________________________________________
Database sequence:     |                  |                 |             | 409
                       0                150               300

  Minus Strand HSPs:

 Score = 81 (28.5 bits), Expect = 6.4, P = 1.0
 Identities = 17/36 (47%), Positives = 17/36 (47%), Frame = -2

Query:   127 PQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             P P   LPPP  PP   PP PSP     P  S  PP
Sbjct:   259 PSPPPPLPPPPSPPPPLPPPPSPPPPSPPPPSPLPP 294

 Score = 81 (28.5 bits), Expect = 6.4, P = 1.0
 Identities = 16/36 (44%), Positives = 18/36 (50%), Frame = -2

Query:   127 PQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             P P    PPP  PP   PP PSP   + P  S +PP
Sbjct:   324 PSPNPPRPPPPSPPPPRPPPPSPNPPRPPPPSPSPP 359

 Score = 81 (28.5 bits), Expect = 6.4, P = 1.0
 Identities = 18/37 (48%), Positives = 18/37 (48%), Frame = -2

Query:   130 SPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             SP P S  PP   PP   PP PSP    NPF    PP
Sbjct:   280 SPPPPSPPPPSPLPPSPRPPKPSPPN--NPFPRPPPP 314


to_Entrezto_Relatedto_Related >gi|9711862|dbj|BAB07956.1|  (AP002524) putative extensin-like protein [Oryza
            sativa]
            Length = 579

Frame -2 hits (HSPs):                                    ____             
                        __________________________________________________
Database sequence:     |            |            |            |           | 579
                       0          150          300          450

  Minus Strand HSPs:

 Score = 82 (28.9 bits), Expect = 7.5, P = 1.0
 Identities = 19/41 (46%), Positives = 19/41 (46%), Frame = -2

Query:   130 SPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPPLGIF 8
             SP P S  PP   PP   PP PSP     P  S  PP  IF
Sbjct:   388 SPPPPSPPPPSPPPPSTSPPPPSPPPPSPPPPSPPPPAPIF 428


to_Entrezto_Relatedto_Related >gi|7503170|pir||T31880  hypothetical protein F41E6.11 - Caenorhabditis elegans
            >gi|2315457|gb|AAB65959.1| (AF016448) F41E6.11 gene product
            [Caenorhabditis elegans]
            Length = 316

Frame -2 hits (HSPs):      ________                                       
                        __________________________________________________
Database sequence:     |       |       |       |       |       |       |  | 316
                       0      50     100     150     200     250     300

  Minus Strand HSPs:

 Score = 79 (27.8 bits), Expect = 7.7, P = 1.0
 Identities = 15/46 (32%), Positives = 19/46 (41%), Frame = -2

Query:   151 CSLXKIKSPQPLSXLPP--PXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             C+      P P+   PP  P   P   PP P+P    NP+    PP
Sbjct:    24 CATPPCPEPMPVCATPPCPPQYAPLPPPPMPAPAPAYNPYPCANPP 69


to_Entrezto_Relatedto_Related >gi|421940|pir||S33159  pAP8 protein - common tobacco (fragment)
            >gi|296127|emb|CAA51466.1| (X72963) pAP8 product [Nicotiana
            tabacum]
            Length = 99

Frame -2 hits (HSPs):                              ____________________   
                        __________________________________________________
Database sequence:     |         |         |         |         |          | 99
                       0        20        40        60        80

  Minus Strand HSPs:

 Score = 67 (23.6 bits), Expect = 7.9, P = 1.0
 Identities = 14/40 (35%), Positives = 19/40 (47%), Frame = -2

Query:   127 PQPLSXLPPPXXPPXKXPPSPSPGKXK----NPFXSXTPP 20
             P P+   PPP  P  K PP P+P        +P+   +PP
Sbjct:    55 PAPVYMSPPPPTPVYKSPPPPTPVYKSPAPHHPYLYASPP 94


to_Entrezto_Related >gi|6755636  ref|NP_035602.1| small proline-rich protein 2F [Mus musculus]
            >gi|3093367|emb|CAA06593.1| (AJ005564) SPR2F protein [Mus musculus]
            Length = 76

Frame -3 hits (HSPs):                     _________________________       
                        __________________________________________________
Database sequence:     |            |            |            |           | 76
                       0           20           40           60

  Minus Strand HSPs:

 Score = 59 (20.8 bits), Expect = 8.2, P = 1.0
 Identities = 15/38 (39%), Positives = 17/38 (44%), Frame = -3

Query:   126 PNHCPX-CHPPXXXQXXPXP-PHPRGNXKIPFXPLPPP 19
             P+ CP  C PP   +  P P P P    K P    PPP
Sbjct:    29 PSVCPEPCPPPKCPEPCPEPCPPPSFQQKCPPVQPPPP 66


to_Entrezto_Relatedto_Related >gi|322747|pir||PQ0452  extensin-like protein - Persian tobacco (strain S2S3)
            (fragment)
            Length = 122

Frame -2 hits (HSPs):                       ______________                
                        __________________________________________________
Database sequence:     |                    |                   |         | 122
                       0                   50                 100

  Minus Strand HSPs:

 Score = 71 (25.0 bits), Expect = 8.4, P = 1.0
 Identities = 19/39 (48%), Positives = 20/39 (51%), Frame = -2

Query:   136 IKSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPP 20
             +KSP P S  PP   PP   PPSPSP     P  S  PP
Sbjct:    50 VKSPPPPSPPPPSPSPP---PPSPSPPP---PSPSPPPP 82


to_Entrezto_Related >gi|6755638  ref|NP_035603.1| small proline-rich protein 2G [Mus musculus]
            >gi|3093369|emb|CAA06594.1| (AJ005565) SPR2G protein [Mus musculus]
            Length = 76

Frame -2 hits (HSPs):             _________________________________       
                        __________________________________________________
Database sequence:     |            |            |            |           | 76
                       0           20           40           60

  Minus Strand HSPs:

 Score = 59 (20.8 bits), Expect = 8.4, P = 1.0
 Identities = 16/38 (42%), Positives = 18/38 (47%), Frame = -2

Query:   133 KSPQPLSXLPPPXXP-PXKXPPSPSPGKXKNPFXSXTPP 20
             K P+P    PPP  P P   P  PSP + K P     PP
Sbjct:    31 KCPEPC---PPPKCPEPCPEPCLPSPCQQKCPPVQTPPP 66

 Score = 59 (20.8 bits), Expect = 8.4, P = 1.0
 Identities = 15/46 (32%), Positives = 18/46 (39%), Frame = -2

Query:   154 LCSLXKIKSPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPPL 17
             +C   K   P PL   P P  PP    P P P    +P     PP+
Sbjct:    17 VCPPPKCPEPCPLPKCPEPCPPPKCPEPCPEPC-LPSPCQQKCPPV 61


to_Entrezto_Relatedto_Related >gi|4581107|gb|AAD24597.1|AC005825_4  (AC005825) unknown protein [Arabidopsis
            thaliana]
            Length = 353

Frame -2 hits (HSPs):                              ______                 
                        __________________________________________________
Database sequence:     |                     |                    |       | 353
                       0                   150                  300

  Minus Strand HSPs:

 Score = 79 (27.8 bits), Expect = 9.1, P = 1.0
 Identities = 16/38 (42%), Positives = 19/38 (50%), Frame = -2

Query:   130 SPQPLSXLPPPXXPPXKXPPSPSPGKXKNPFXSXTPPL 17
             SP P + LPPP  P    PP  SP + K P     PP+
Sbjct:   192 SPDPPTTLPPPLVPVINLPPVTSPPQFKLPPLPQIPPM 229


Parameters:
  filter=none
  matrix=BLOSUM62
  V=50
  B=50
  E=10
  gi
  H=1
  sort_by_pvalue
  echofilter

  ctxfactor=5.95

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   Std.    0   BLOSUM62                                 0.318   0.135   0.401  
   +3      0   BLOSUM62        0.318   0.135   0.401    0.342   0.155   0.522  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   +2      0   BLOSUM62        0.318   0.135   0.401    0.343   0.155   0.579  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   +1      0   BLOSUM62        0.318   0.135   0.401    0.359   0.163   0.636  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -1      0   BLOSUM62        0.318   0.135   0.401    0.344   0.156   0.583  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -2      0   BLOSUM62        0.318   0.135   0.401    0.338   0.150   0.496  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -3      0   BLOSUM62        0.318   0.135   0.401    0.355   0.163   0.610  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E    S W   T  X   E2     S2
   +3      0      170       147       10.  74 3  12 22  0.12    33
                                                    30  0.11    36
   +2      0      170       144       10.  73 3  12 22  0.12    33
                                                    30  0.11    36
   +1      0      170       146       10.  74 3  12 22  0.12    33
                                                    30  0.11    36
   -1      0      170       145       10.  74 3  12 22  0.12    33
                                                    30  0.11    36
   -2      0      170       147       10.  74 3  12 22  0.12    33
                                                    30  0.11    36
   -3      0      170       146       10.  74 3  12 22  0.12    33
                                                    30  0.11    36


Statistics:

  Database:  /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
    Title:  nr
    Release date:  unknown
    Posted date:  4:06 PM CST Feb 28, 2001
    Format:  BLAST
  # of letters in database:  197,782,623
  # of sequences in database:  625,274
  # of database sequences satisfying E:  44
  No. of states in DFA:  597 (59 KB)
  Total size of DFA:  183 KB (192 KB)
  Time to generate neighborhood:  0.01u 0.00s 0.01t  Elapsed: 00:00:00
  No. of threads or processors used:  6
  Search cpu time:  164.76u 0.98s 165.74t  Elapsed: 00:00:28
  Total cpu time:  164.80u 1.02s 165.82t  Elapsed: 00:00:28
  Start:  Mon Oct  1 22:35:05 2001   End:  Mon Oct  1 22:35:33 2001



Annotated Domains Database:   March 14, 2000 

Release Date:  March 14, 2000