R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 11 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|485515|pir||S33622 ADR6 protein - soybean >gi|296445|emb|CAA49340.1|
(X69639) auxin down regulated [Glycine max]
>gi|2304955|gb|AAB65592.1| (U64866) similar to ADR6 encoded by
GenBank Accession Number X69639; aluminum induced [Glycine max]
Length = 272
Frame 2 hits (HSPs): _______
Annotated Domains: _____________________________________________
__________________________________________________
Database sequence: | | | | | | | 272
0 50 100 150 200 250
__________________
Annotated Domains:
DOMO DM02982: 18..258
__________________
Plus Strand HSPs:
Score = 163 (57.4 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 32/32 (100%), Positives = 32/32 (100%), Frame = +2
Query: 83 VRETTAFMVPLVAGDGTKTQALAICHSNTSGM 178
VRETTAFMVPLVAGDGTKTQALAICHSNTSGM
Sbjct: 196 VRETTAFMVPLVAGDGTKTQALAICHSNTSGM 227
>gi|7488713|pir||T08896 Sali3-2 protein, aluminium-induced - soybean
>gi|2317900|gb|AAB66369.1| (U89693) Sali3-2 [Glycine max]
Length = 276
Frame 2 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | | | 276
0 50 100 150 200 250
Plus Strand HSPs:
Score = 155 (54.6 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 29/33 (87%), Positives = 33/33 (100%), Frame = +2
Query: 80 RVRETTAFMVPLVAGDGTKTQALAICHSNTSGM 178
+VRETTAF+VPLVAGDGTKTQALA+CHS+TSGM
Sbjct: 199 KVRETTAFVVPLVAGDGTKTQALAVCHSDTSGM 231
>gi|560554|gb|AAB31222.1| (S71728) truncated protein [Saccharomyces cerevisiae]
Length = 33
Frame -1 hits (HSPs): ___________________________________
__________________________________________________
Database sequence: | | | 33
0 20
Minus Strand HSPs:
Score = 122 (42.9 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 21/23 (91%), Positives = 22/23 (95%), Frame = -1
Query: 83 LVPNSCSPGDPLVLERPPPRWSS 15
L+ NSCSPGDPLVLERPPPRWSS
Sbjct: 8 LISNSCSPGDPLVLERPPPRWSS 30
>gi|560556|gb|AAB31223.1| (S71730) influenza virus hemagglutinin 5' epitope
tag=fusion protein {N-terminal, frame 1} [Saccharomyces
cerevisiae=yeast, YCpIF15,16,17 cloning vector, Peptide Plasmid
Synthetic Partial, 45 aa]
Length = 45
Frame -1 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | 45
0 20 40
Minus Strand HSPs:
Score = 122 (42.9 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 21/23 (91%), Positives = 22/23 (95%), Frame = -1
Query: 83 LVPNSCSPGDPLVLERPPPRWSS 15
L+ NSCSPGDPLVLERPPPRWSS
Sbjct: 20 LISNSCSPGDPLVLERPPPRWSS 42
>gi|773414|gb|AAB05989.1| (U23751) beta galactosidase [Cloning vector
pBBR1MCS-2] >gi|833819|gb|AAB06689.1| (U25059) LacZ alpha peptide
[Cloning vector pBBR1MCS-3] >gi|833823|gb|AAB06692.1| (U25060) LacZ
alpha peptide [Cloning vector pBBR1MCS-4] >gi|833827|gb|AAB06695.1|
(U25061) LacZ alpha peptide [Cloning vector pBBR1MCS-5]
Length = 121
Frame -1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 121
0 50 100
Minus Strand HSPs:
Score = 122 (42.9 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 21/23 (91%), Positives = 22/23 (95%), Frame = -1
Query: 83 LVPNSCSPGDPLVLERPPPRWSS 15
L+ NSCSPGDPLVLERPPPRWSS
Sbjct: 33 LISNSCSPGDPLVLERPPPRWSS 55
>gi|7384996|gb|AAF61634.1| (AF153422) lacZ [Cloning vector pTG8]
Length = 197
Frame -1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | 197
0 50 100 150
Minus Strand HSPs:
Score = 122 (42.9 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 21/23 (91%), Positives = 22/23 (95%), Frame = -1
Query: 83 LVPNSCSPGDPLVLERPPPRWSS 15
L+ NSCSPGDPLVLERPPPRWSS
Sbjct: 36 LISNSCSPGDPLVLERPPPRWSS 58
>gi|9294786|gb|AAF86670.1|AF178449_1 (AF178449) beta-galactosidase alpha
peptide [Integration vector pCD11PKS]
>gi|9294795|gb|AAF86676.1|AF178452_1 (AF178452) beta-galactosidase
alpha peptide [Integration vector pCD13PKS]
Length = 127
Frame -1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 127
0 50 100
Minus Strand HSPs:
Score = 122 (42.9 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 21/23 (91%), Positives = 22/23 (95%), Frame = -1
Query: 83 LVPNSCSPGDPLVLERPPPRWSS 15
L+ NSCSPGDPLVLERPPPRWSS
Sbjct: 33 LISNSCSPGDPLVLERPPPRWSS 55
>gi|7489187|pir||T02229 protein BYJ15 - common tobacco (fragment)
>gi|2280518|dbj|BAA21615.1| (AB005878) BYJ15 [Nicotiana tabacum]
Length = 172
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
Plus Strand HSPs:
Score = 121 (42.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 23/23 (100%), Positives = 23/23 (100%), Frame = +1
Query: 16 ELHRGGGRSRTSGSPGLQEFGTS 84
ELHRGGGRSRTSGSPGLQEFGTS
Sbjct: 2 ELHRGGGRSRTSGSPGLQEFGTS 24
>gi|762925|emb|CAA59990.1| (X85998) elastin like protein [Drosophila
melanogaster]
Length = 110
Frame 2 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | | | 110
0 20 40 60 80 100
Plus Strand HSPs:
Score = 118 (41.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 26/36 (72%), Positives = 27/36 (75%), Frame = +2
Query: 17 SSTAVAAALELVDPPGCRNSARVRETTAFMVPLVAG 124
SSTAVAAALELVDPPGCRNSAR R+ L AG
Sbjct: 2 SSTAVAAALELVDPPGCRNSARDRQRANLNSQLYAG 37
>gi|119097|sp|P21747|EA92_VICFA EMBRYONIC ABUNDANT PROTEIN USP92 PRECURSOR
>gi|82002|pir||S04136 embryonic abundant protein precursor (clone
pUSP92) - tick bean >gi|22051|emb|CAA31602.1| (X13210) USP
precursor [Vicia faba]
Length = 268
Frame 2 hits (HSPs): ________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
__________________
Annotated Domains:
Entrez Domain: 3 X 6 AA APPROXIMATE REPEATS. 50..106
Entrez Repetitive region: 1-1. 50..55
Entrez Repetitive region: 1-2. 83..88
Entrez Repetitive region: 1-3. 101..106
Entrez Domain: 2 X APPROXIMATE REPEATS. 166..222
Entrez Repetitive region: 2-1. 166..183
Entrez Repetitive region: 2-2. 202..222
Entrez glycosylation site: POTENTIAL. 259
PRODOM PD009870: 1..79
PRODOM PD013884: 86..126
PRODOM PD004669: 128..256
__________________
Plus Strand HSPs:
Score = 122 (42.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 23/36 (63%), Positives = 29/36 (80%), Frame = +2
Query: 71 NSARVRETTAFMVPLVAGDGTKTQALAICHSNTSGM 178
N +VRETTA++V LVA DGTKT+AL +CH +T GM
Sbjct: 192 NCHQVRETTAYVVSLVASDGTKTKALTVCHHDTRGM 227
>gi|100102|pir||S14068 seed protein precursor - tick bean
>gi|22043|emb|CAA39696.1| (X56240) unknown seed protein [Vicia
faba]
Length = 268
Frame 2 hits (HSPs): ________
Annotated Domains: ____
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
__________________
Annotated Domains:
Entrez domain: signal sequence 1..22
__________________
Plus Strand HSPs:
Score = 119 (41.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 22/36 (61%), Positives = 29/36 (80%), Frame = +2
Query: 71 NSARVRETTAFMVPLVAGDGTKTQALAICHSNTSGM 178
N +VR+TTA++V LVA DGTKT+AL +CH +T GM
Sbjct: 192 NCHQVRDTTAYVVSLVASDGTKTKALTVCHHDTRGM 227
>gi|135067|sp|P09059|SVF3_VICFA UNKNOWN SEED PROTEIN 30.1 PRECURSOR (VF30.1)
>gi|82000|pir||S03328 embryonic abundant protein precursor (clone
pUSP14) - tick bean >gi|22046|emb|CAA31626.1| (X13242) seed protein
[Vicia faba]
Length = 268
Frame 2 hits (HSPs): ________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
__________________
Annotated Domains:
PRODOM PD009870: 1..79
PRODOM PD013884: 86..126
PRODOM PD004669: 128..256
__________________
Plus Strand HSPs:
Score = 119 (41.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 22/36 (61%), Positives = 29/36 (80%), Frame = +2
Query: 71 NSARVRETTAFMVPLVAGDGTKTQALAICHSNTSGM 178
N +VR+TTA++V LVA DGTKT+AL +CH +T GM
Sbjct: 192 NCHQVRDTTAYVVSLVASDGTKTKALTVCHHDTRGM 227
>gi|119096|sp|P21746|EA87_VICFA EMBRYONIC ABUNDANT PROTEIN USP87 PRECURSOR
>gi|82001|pir||S04135 embryonic abundant protein precursor (clone
pUSP87) - tick bean >gi|22049|emb|CAA31603.1| (X13211) USP
precursor [Vicia faba]
Length = 268
Frame 2 hits (HSPs): ________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
__________________
Annotated Domains:
Entrez Domain: 3 X 6 AA APPROXIMATE REPEATS. 50..106
Entrez Repetitive region: 1-1. 50..55
Entrez Repetitive region: 1-2. 83..88
Entrez Repetitive region: 1-3. 101..106
Entrez Domain: 2 X APPROXIMATE REPEATS. 166..222
Entrez Repetitive region: 2-1. 166..183
Entrez Repetitive region: 2-2. 202..222
Entrez glycosylation site: POTENTIAL. 259
PRODOM PD009870: 1..79
PRODOM PD013884: 86..126
PRODOM PD004669: 128..256
__________________
Plus Strand HSPs:
Score = 119 (41.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 22/36 (61%), Positives = 29/36 (80%), Frame = +2
Query: 71 NSARVRETTAFMVPLVAGDGTKTQALAICHSNTSGM 178
N +VR+TTA++V LVA DGTKT+AL +CH +T GM
Sbjct: 192 NCHQVRDTTAYVVSLVASDGTKTKALTVCHHDTRGM 227
>gi|119095|sp|P21745|EA30_VICFA EMBRYONIC ABUNDANT PROTEIN VF30.1 PRECURSOR
>gi|82003|pir||S05471 embryonic abundant protein precursor (clone
USP Vf30.1) - tick bean
Length = 268
Frame 2 hits (HSPs): ________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
__________________
Annotated Domains:
DOMO DM02982: 17..258
Entrez Domain: 3 X 6 AA APPROXIMATE REPEATS. 50..106
Entrez Repetitive region: 1-1. 50..55
Entrez Repetitive region: 1-2. 83..88
Entrez Repetitive region: 1-3. 101..106
Entrez Domain: 2 X APPROXIMATE REPEATS. 166..222
Entrez Repetitive region: 2-1. 166..183
Entrez Repetitive region: 2-2. 202..222
Entrez glycosylation site: POTENTIAL. 259
PRODOM PD009870: 1..79
PRODOM PD013884: 86..126
PRODOM PD004669: 128..256
__________________
Plus Strand HSPs:
Score = 119 (41.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 22/36 (61%), Positives = 29/36 (80%), Frame = +2
Query: 71 NSARVRETTAFMVPLVAGDGTKTQALAICHSNTSGM 178
N +VR+TTA++V LVA DGTKT+AL +CH +T GM
Sbjct: 192 NCHQVRDTTAYVVSLVASDGTKTKALTVCHHDTRGM 227
>gi|4028979|emb|CAA06470.1| (AJ005323) glutamate permease [synthetic construct]
>gi|4028985|emb|CAA06473.1| (AJ005326) glutamate permease
[synthetic construct] >gi|4028991|emb|CAA06476.1| (AJ005329)
glutamate permease [synthetic construct]
Length = 459
Frame -1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | 459
0 150 300 450
Minus Strand HSPs:
Score = 122 (42.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 21/23 (91%), Positives = 22/23 (95%), Frame = -1
Query: 83 LVPNSCSPGDPLVLERPPPRWSS 15
L+ NSCSPGDPLVLERPPPRWSS
Sbjct: 206 LISNSCSPGDPLVLERPPPRWSS 228
>gi|2129886|pir||S70755 hypothetical protein - garden pea
>gi|20914|emb|CAA38756.1| (X55012) unknown seed protein [Pisum
sativum]
Length = 221
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 115 (40.5 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 22/36 (61%), Positives = 27/36 (75%), Frame = +2
Query: 71 NSARVRETTAFMVPLVAGDGTKTQALAICHSNTSGM 178
N +V +TTA+MV LVA DGTKT AL +CH +T GM
Sbjct: 158 NCHQVSKTTAYMVSLVASDGTKTNALTVCHHDTRGM 193
>gi|7489188|pir||T02232 protein BYJ6 - common tobacco (fragment)
>gi|2280520|dbj|BAA21616.1| (AB005879) BYJ6 [Nicotiana tabacum]
Length = 177
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | 177
0 50 100 150
Plus Strand HSPs:
Score = 108 (38.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 20/20 (100%), Positives = 20/20 (100%), Frame = +1
Query: 22 HRGGGRSRTSGSPGLQEFGT 81
HRGGGRSRTSGSPGLQEFGT
Sbjct: 5 HRGGGRSRTSGSPGLQEFGT 24
>gi|11993889|gb|AAG42155.1| (AY012159) virion-associated nuclear-shuttling
protein [Mus musculus]
Length = 576
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | 576
0 150 300 450
Plus Strand HSPs:
Score = 117 (41.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 22/22 (100%), Positives = 22/22 (100%), Frame = +1
Query: 16 ELHRGGGRSRTSGSPGLQEFGT 81
ELHRGGGRSRTSGSPGLQEFGT
Sbjct: 6 ELHRGGGRSRTSGSPGLQEFGT 27
>gi|3402817|emb|CAA07704.1| (AJ007829) lacZ' [Cloning vector pGreen]
Length = 120
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 120
0 50 100
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.00018, P = 0.00018
Identities = 20/20 (100%), Positives = 20/20 (100%), Frame = +2
Query: 17 SSTAVAAALELVDPPGCRNS 76
SSTAVAAALELVDPPGCRNS
Sbjct: 20 SSTAVAAALELVDPPGCRNS 39
>gi|9294789|gb|AAF86672.1|AF178450_1 (AF178450) beta-galactosidase alpha
peptide [Integration vector pCD11PSK]
>gi|9294798|gb|AAF86678.1|AF178453_1 (AF178453) beta-galactosidase
alpha peptide [Integration vector pCD13PSK]
Length = 127
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 127
0 50 100
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.00018, P = 0.00018
Identities = 20/20 (100%), Positives = 20/20 (100%), Frame = +2
Query: 17 SSTAVAAALELVDPPGCRNS 76
SSTAVAAALELVDPPGCRNS
Sbjct: 20 SSTAVAAALELVDPPGCRNS 39
>gi|7488827|pir||T06815 probable embryonic abundant protein - garden pea
(fragment) >gi|20912|emb|CAA38755.1| (X55011) internal part of pea
Unknown Seed Protein (USP) [Pisum sativum]
Length = 221
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 102 (35.9 bits), Expect = 0.00028, P = 0.00028
Identities = 20/36 (55%), Positives = 25/36 (69%), Frame = +2
Query: 71 NSARVRETTAFMVPLVAGDGTKTQALAICHSNTSGM 178
N +V +TTA+MV LVA DG KT L +CH +T GM
Sbjct: 158 NCHQVSKTTAYMVSLVASDGYKTNDLTVCHHDTRGM 193
>gi|560558|gb|AAB31224.1| (S71742) influenza virus hemagglutinin 5' epitope
tag=fusion protein {N-terminal} [Saccharomyces cerevisiae=yeast,
YCpIF15,16,17 cloning vector, Peptide Plasmid Synthetic Partial, 50
aa]
Length = 50
Frame -3 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | 50
0 20 40
Minus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.00063, P = 0.00062
Identities = 20/20 (100%), Positives = 20/20 (100%), Frame = -3
Query: 75 EFLQPGGSTSSRAAATAVEL 16
EFLQPGGSTSSRAAATAVEL
Sbjct: 28 EFLQPGGSTSSRAAATAVEL 47
>gi|560560|gb|AAB31225.1| (S71745) influenza virus hemagglutinin 5' epitope
tag=fusion protein {N-terminal, frame 3} [Saccharomyces
cerevisiae=yeast, YCpIF15,16,17 cloning vector, Peptide Plasmid
Synthetic Partial, 56 aa]
Length = 56
Frame -3 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | 56
0 20 40
Minus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.00063, P = 0.00062
Identities = 20/20 (100%), Positives = 20/20 (100%), Frame = -3
Query: 75 EFLQPGGSTSSRAAATAVEL 16
EFLQPGGSTSSRAAATAVEL
Sbjct: 34 EFLQPGGSTSSRAAATAVEL 53
>gi|10281475|gb|AAG15510.1|U56995_1 (U56995) mutant green fluorescent protein
[Cloning vector pGreenscript A]
Length = 302
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | || 302
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.00092, P = 0.00092
Identities = 20/20 (100%), Positives = 20/20 (100%), Frame = +2
Query: 17 SSTAVAAALELVDPPGCRNS 76
SSTAVAAALELVDPPGCRNS
Sbjct: 20 SSTAVAAALELVDPPGCRNS 39
>gi|1684629|emb|CAA70550.1| (Y09374) lacZ-PhoC [synthetic construct]
Length = 316
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | | | 316
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.0010, P = 0.0010
Identities = 20/20 (100%), Positives = 20/20 (100%), Frame = +2
Query: 17 SSTAVAAALELVDPPGCRNS 76
SSTAVAAALELVDPPGCRNS
Sbjct: 20 SSTAVAAALELVDPPGCRNS 39
>gi|4028981|emb|CAA06471.1| (AJ005324) glutamate permease [synthetic construct]
>gi|4028987|emb|CAA06474.1| (AJ005327) glutamate permease
[synthetic construct] >gi|4028993|emb|CAA06477.1| (AJ005330)
glutamate permease [synthetic construct]
Length = 459
Frame 2 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | 459
0 150 300 450
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.0018, P = 0.0018
Identities = 20/20 (100%), Positives = 20/20 (100%), Frame = +2
Query: 17 SSTAVAAALELVDPPGCRNS 76
SSTAVAAALELVDPPGCRNS
Sbjct: 193 SSTAVAAALELVDPPGCRNS 212
>gi|7489022|pir||T07178 hypothetical protein SEND35, senescence down-regulated
- tomato (fragment) >gi|1418986|emb|CAA99758.1| (Z75522) unknown
[Lycopersicon esculentum]
Length = 91
Frame 2 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | | 91
0 20 40 60 80
Plus Strand HSPs:
Score = 80 (28.2 bits), Expect = 0.024, P = 0.024
Identities = 16/29 (55%), Positives = 22/29 (75%), Frame = +2
Query: 89 ETT-AFMVPLVAGDGTKTQALAICHSNTS 172
ETT ++MV LV DG+K +A+A+CH TS
Sbjct: 54 ETTESYMVSLVGVDGSKVKAVAVCHKGTS 82
>gi|1172874|sp|Q08298|RD22_ARATH DEHYDRATION-RESPONSIVE PROTEIN RD22 PRECURSOR
>gi|479589|pir||S34823 dehydration-induced protein RD22 -
Arabidopsis thaliana >gi|391608|dbj|BAA01546.1| (D10703) rd22
[Arabidopsis thaliana] >gi|447134|prf||1913421A rd22 gene
[Arabidopsis thaliana]
Length = 392
Frame 2 hits (HSPs): ____
Frame 1 hits (HSPs): __
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 392
0 150 300
__________________
Annotated Domains:
DOMO DM02982: 118..391
Entrez Domain: 5 X APPROXIMATE REPEATS. 57..164
Entrez Repetitive region: 1. 57..75
Entrez Repetitive region: 2. 78..97
Entrez Repetitive region: 3. 100..120
Entrez Repetitive region: 4. 125..142
Entrez Repetitive region: 5. 145..164
PRODOM PD122867: RD22_ARATH 1..167
PRODOM PD004669: 169..390
__________________
Plus Strand HSPs:
Score = 76 (26.8 bits), Expect = 0.028, Sum P(2) = 0.028
Identities = 13/27 (48%), Positives = 19/27 (70%), Frame = +2
Query: 92 TTAFMVPLVAGDGTKTQALAICHSNTS 172
TT + VPL +G + +A+A+CH NTS
Sbjct: 331 TTVYAVPLEGENGMRAKAVAVCHKNTS 357
Score = 31 (10.9 bits), Expect = 0.028, Sum P(2) = 0.028
Identities = 6/12 (50%), Positives = 8/12 (66%), Frame = +1
Query: 28 GGGRSRTSGSPG 63
GGG + +G PG
Sbjct: 111 GGGVAVHTGKPG 122
>gi|7649667|emb|CAB88874.1| (AJ005810) phosphatidylinositol 4-kinase [Solanum
tuberosum]
Length = 517
Frame 2 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | 517
0 150 300 450
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 0.18, P = 0.17
Identities = 17/26 (65%), Positives = 20/26 (76%), Frame = +2
Query: 32 AAALELVDPPGCRNSARVRETTAFMV 109
AAALELVDPPGCRNS RE +++
Sbjct: 1 AAALELVDPPGCRNS---REKAPYLI 23
>gi|126465|sp|P17588|LRP1_HSV1F LATENCY-RELATED PROTEIN 1 >gi|74037|pir||WMBEL1
latency-related protein 1 - human herpesvirus 1 (strain F)
>gi|330134|gb|AAA45799.1| (J04323) latency-related protein 1 [human
herpesvirus 1]
Length = 340
Frame -2 hits (HSPs): ___
Frame -3 hits (HSPs): ___ _____
Annotated Domains: __________________________________________
__________________________________________________
Database sequence: | | | | 340
0 150 300
__________________
Annotated Domains:
DOMO DM06168: 91..209
Entrez Domain: 2 X 17 AA REPEATS. 27..75
Entrez Repetitive region: 1. 27..43
Entrez Repetitive region: 2. 59..75
PRODOM PD030351: LRP1(1) Q69079(1) Q9YPF7(1) 1..24
PRODOM PD015574: 26..123
PRODOM PD030352: LRP1(1) Q69079(1) Q9YPF7(1) 125..156
PRODOM PD019794: LRP1(1) Q69079(1) Q9YPF7(1) 158..208
PRODOM PD028664: LRP1(1) Q69079(1) Q9YPF7(1) 210..248
PRODOM PD060918: LRP1_HSV1F 250..283
__________________
Minus Strand HSPs:
Score = 43 (15.1 bits), Expect = 0.26, Sum P(3) = 0.23
Identities = 11/25 (44%), Positives = 13/25 (52%), Frame = -3
Query: 108 TMKAVVSRTRAEFLQPGGSTSSRAA 34
T VS +R LQPG + SR A
Sbjct: 215 TWLPAVSGSRVRRLQPGTAARSRVA 239
Score = 35 (12.3 bits), Expect = 0.26, Sum P(3) = 0.23
Identities = 8/15 (53%), Positives = 10/15 (66%), Frame = -3
Query: 150 ASA*VLVPSPATNGT 106
A+A L P PA +GT
Sbjct: 12 AAALWLTPEPAQHGT 26
Score = 32 (11.3 bits), Expect = 0.26, Sum P(3) = 0.23
Identities = 7/12 (58%), Positives = 7/12 (58%), Frame = -2
Query: 37 GRHRGGAPSXRR 2
GR RGG RR
Sbjct: 313 GRGRGGRGGGRR 324
>gi|7106540|dbj|BAA92225.1| (AB038692) similar to the BURP domain [Vigna
unguiculata]
Length = 132
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | 132
0 50 100
Plus Strand HSPs:
Score = 69 (24.3 bits), Expect = 0.41, P = 0.33
Identities = 13/29 (44%), Positives = 21/29 (72%), Frame = +2
Query: 89 ETT-AFMVPLVAGDGTKTQALAICHSNTS 172
ETT + VPL +G + +A+A+CH++TS
Sbjct: 69 ETTRTYPVPLEGANGIRVKAVAVCHTDTS 97
>gi|6319835 ref|NP_009916.1| Protein with RNA recognition motifs; Gbp2p
[Saccharomyces cerevisiae] >gi|140346|sp|P25555|GBP2_YEAST
SINGLE-STRAND TELOMERIC DNA-BINDING PROTEIN GBP2 (G-STRAND BINDING
PROTEIN 2) (RAP1 LOCALIZATION FACTOR 6) >gi|83139|pir||S19338
hypothetical protein YCL011c - yeast (Saccharomyces cerevisiae)
>gi|1907133|emb|CAA42348.1| (X59720) YCL011c, len:427
[Saccharomyces cerevisiae]
Length = 427
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): __ __
__________________________________________________
Database sequence: | | | | 427
0 150 300
Plus Strand HSPs:
Score = 42 (14.8 bits), Expect = 0.56, Sum P(3) = 0.43
Identities = 8/10 (80%), Positives = 8/10 (80%), Frame = +1
Query: 25 RGGGRSRTSG 54
RGGGR RT G
Sbjct: 93 RGGGRGRTLG 102
Score = 36 (12.7 bits), Expect = 0.56, Sum P(3) = 0.43
Identities = 9/22 (40%), Positives = 14/22 (63%), Frame = +3
Query: 75 RHESVKQQLSWFHWWLVMEPKL 140
++ESV+ +S F L M+ KL
Sbjct: 170 KNESVQDAISKFDGALFMDRKL 191
Score = 32 (11.3 bits), Expect = 0.56, Sum P(3) = 0.43
Identities = 6/13 (46%), Positives = 7/13 (53%), Frame = +1
Query: 130 NQNSGTCYLPLKY 168
N N G C L + Y
Sbjct: 411 NYNYGGCSLQISY 423
>gi|8052392|emb|CAB92249.1| (AL356595) putative single-strand DNA binding
protein [Streptomyces coelicolor A3(2)]
Length = 156
Frame -1 hits (HSPs): _______
Frame -2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | 156
0 50 100 150
Minus Strand HSPs:
Score = 45 (15.8 bits), Expect = 0.71, Sum P(2) = 0.51
Identities = 8/18 (44%), Positives = 12/18 (66%), Frame = -1
Query: 80 VPNSCSPGDPLVLERPPP 27
VP +PG+P+ +RP P
Sbjct: 135 VPAGGTPGEPVPEQRPDP 152
Score = 39 (13.7 bits), Expect = 0.71, Sum P(2) = 0.51
Identities = 8/27 (29%), Positives = 15/27 (55%), Frame = -2
Query: 160 VANSKCLSFG-SITSHQWNHESCCFTD 83
+AN + F ++T+ W+ E +TD
Sbjct: 21 LANGPSVRFRLAVTARYWDREKNAWTD 47
>gi|11277059|pir||T49900 2-oxoglutarate/malate translocator-like protein
T24H18.30 [similarity] - Arabidopsis thaliana
>gi|7630042|emb|CAB88250.1| (AL353013) 2-oxoglutarate/malate
translocator precursor-like protein [Arabidopsis thaliana]
Length = 557
Frame 3 hits (HSPs): ___
Frame 2 hits (HSPs): ___
Frame 1 hits (HSPs): __
__________________________________________________
Database sequence: | | | | | 557
0 150 300 450
Plus Strand HSPs:
Score = 44 (15.5 bits), Expect = 1.0, Sum P(3) = 0.63
Identities = 6/20 (30%), Positives = 11/20 (55%), Frame = +3
Query: 57 PRAAGIRHESVKQQLSWFHW 116
P +A + ++KQ + W W
Sbjct: 283 PLSANLAFNTIKQTIGWTDW 302
Score = 36 (12.7 bits), Expect = 1.0, Sum P(3) = 0.63
Identities = 8/20 (40%), Positives = 12/20 (60%), Frame = +2
Query: 2 STXARSSTAVAAALELVDPP 61
ST ++S+ VA+A PP
Sbjct: 60 STLVKASSTVASASSSPTPP 79
Score = 31 (10.9 bits), Expect = 1.0, Sum P(3) = 0.63
Identities = 5/11 (45%), Positives = 7/11 (63%), Frame = +1
Query: 142 GTCYLPLKYFW 174
G Y+PL +W
Sbjct: 519 GANYVPLAKWW 529
>gi|7433739|pir||E72096 [acyl-carrier-protein] S-malonyltransferase (EC
2.3.1.39) fabD CP0461 [similarity] - Chlamydophila pneumoniae
(strains CWL029 and AR39) >gi|4376572|gb|AAD18446.1| (AE001614)
Malonyl Acyl Carrier Transcyclase [Chlamydophila pneumoniae CWL029]
>gi|7189383|gb|AAF38298.1| (AE002207) malonyl CoA-acyl carrier
protein transacylase [Chlamydophila pneumoniae AR39]
Length = 308
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | | | 308
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 72 (25.3 bits), Expect = 1.1, P = 0.66
Identities = 18/50 (36%), Positives = 27/50 (54%), Frame = +2
Query: 29 VAAALELVDPPGCRNSARVRETTAFMVPL--VAGDGTKTQALAICHSNTS 172
V A+EL GC+ + R++ + AF PL VA DG A+C ++S
Sbjct: 175 VDQAIELFRDLGCKKAVRLKVSGAFHTPLMQVAQDGLAPDIYALCMKDSS 224
>gi|8978671|dbj|BAA98507.1| (AP002546) malonyl acyl carrier transcyclase
[Chlamydophila pneumoniae J138]
Length = 308
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | | | 308
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 72 (25.3 bits), Expect = 1.1, P = 0.66
Identities = 18/50 (36%), Positives = 27/50 (54%), Frame = +2
Query: 29 VAAALELVDPPGCRNSARVRETTAFMVPL--VAGDGTKTQALAICHSNTS 172
V A+EL GC+ + R++ + AF PL VA DG A+C ++S
Sbjct: 175 VDQAIELFRDLGCKKAVRLKVSGAFHTPLMQVAQDGLAPDIYALCMKDSS 224
>gi|1773024|gb|AAB40147.1| (U63336) MHC Class I region proline rich protein
[Homo sapiens]
Length = 253
Frame -1 hits (HSPs): __ _______
__________________________________________________
Database sequence: | | | | | || 253
0 50 100 150 200 250
Minus Strand HSPs:
Score = 51 (18.0 bits), Expect = 1.2, Sum P(2) = 0.71
Identities = 13/32 (40%), Positives = 15/32 (46%), Frame = -1
Query: 116 PMEP*KLLFHGLVPNSCSPGDPLVLERPPPRW 21
P +P L G P S P P +L PPP W
Sbjct: 116 PGDPKSALHRG-PPGSRGPLIPPLLSLPPPPW 146
Score = 36 (12.7 bits), Expect = 1.2, Sum P(2) = 0.71
Identities = 5/7 (71%), Positives = 6/7 (85%), Frame = -1
Query: 128 HHQPPME 108
HHQPP +
Sbjct: 74 HHQPPTQ 80
>gi|4336338|gb|AAD17764.1| (AF082394) rev protein [Human immunodeficiency virus
type 1]
Length = 116
Frame -1 hits (HSPs): ________
Frame -3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 116
0 50 100
Minus Strand HSPs:
Score = 45 (15.8 bits), Expect = 1.6, Sum P(2) = 0.80
Identities = 8/19 (42%), Positives = 13/19 (68%), Frame = -1
Query: 80 VPNSC--SPGDPLVLERPP 30
+P+SC P +P+ L+ PP
Sbjct: 59 IPSSCLGRPAEPVPLQLPP 77
Score = 31 (10.9 bits), Expect = 1.6, Sum P(2) = 0.80
Identities = 7/17 (41%), Positives = 10/17 (58%), Frame = -3
Query: 129 PSPATNGTMKAVVSRTR 79
P P NG+ +A +R R
Sbjct: 27 PYPKPNGSRQARRNRRR 43
>gi|2108238|gb|AAB63364.1| (U97360) HFLK homolog [Treponema pallidum]
Length = 220
Frame -1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 220
0 50 100 150 200
Minus Strand HSPs:
Score = 67 (23.6 bits), Expect = 2.2, P = 0.89
Identities = 13/19 (68%), Positives = 14/19 (73%), Frame = -1
Query: 83 LVPNSCSPGDPLVLERPPP 27
L +SC PG PLVLERP P
Sbjct: 195 LQKDSCRPGGPLVLERPHP 213
>gi|7488674|pir||T07623 extensin homolog HRGP2 - soybean (fragment)
>gi|347455|gb|AAA33971.1| (L22030) hydroxyproline-rich glycoprotein
[Glycine max]
Length = 169
Frame -1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | 169
0 50 100 150
Minus Strand HSPs:
Score = 65 (22.9 bits), Expect = 2.3, P = 0.90
Identities = 14/42 (33%), Positives = 19/42 (45%), Frame = -1
Query: 143 PEFWFHHQPPMEP*K---LLFHGLVPNSCSPGDPLVLERPPP 27
P +++H PP P +H P S SP P + PPP
Sbjct: 34 PPYYYHSPPPPSPSPPPPYYYHSPPPPSPSPPSPYYYKSPPP 75
>gi|8927178|gb|AAF81989.1|AF178695_1 (AF178695) gp15 antigen [Cryptosporidium
parvum]
Length = 104
Frame 2 hits (HSPs): ______
Frame 1 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | | | 104
0 20 40 60 80 100
Plus Strand HSPs:
Score = 43 (15.1 bits), Expect = 2.8, Sum P(2) = 0.94
Identities = 12/33 (36%), Positives = 17/33 (51%), Frame = +1
Query: 28 GGGRSRTSGSPGLQEF--GTSP*NNSFHGSIGG 120
G R+ GS G +E G ++S GS+GG
Sbjct: 66 GEDTGRSEGSQGSEEHQDGEDDSSDSSGGSVGG 98
Score = 29 (10.2 bits), Expect = 2.8, Sum P(2) = 0.94
Identities = 7/13 (53%), Positives = 9/13 (69%), Frame = +2
Query: 2 STXARSSTAVAAA 40
S+ + SST VA A
Sbjct: 47 SSSSSSSTTVAPA 59
>gi|7487811|pir||T00609 hypothetical protein T8K22.16 - Arabidopsis thaliana
>gi|3184285|gb|AAC18932.1| (AC004136) hypothetical protein
[Arabidopsis thaliana]
Length = 310
Frame -1 hits (HSPs): ___ __
__________________________________________________
Database sequence: | | | | | | | | 310
0 50 100 150 200 250 300
Minus Strand HSPs:
Score = 55 (19.4 bits), Expect = 3.1, Sum P(2) = 0.96
Identities = 9/14 (64%), Positives = 11/14 (78%), Frame = -1
Query: 128 HHQPPMEP*KLLFH 87
HHQPP + KL+FH
Sbjct: 151 HHQPPPQQRKLMFH 164
Score = 30 (10.6 bits), Expect = 3.1, Sum P(2) = 0.96
Identities = 5/11 (45%), Positives = 6/11 (54%), Frame = -1
Query: 59 GDPLVLERPPP 27
G L +PPP
Sbjct: 200 GGSLTFRQPPP 210
>gi|2231161|gb|AAB61958.1| (L81159) immunoglobulin mu [Equus caballus]
Length = 154
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | 154
0 50 100 150
Plus Strand HSPs:
Score = 63 (22.2 bits), Expect = 3.1, P = 0.96
Identities = 11/11 (100%), Positives = 11/11 (100%), Frame = +2
Query: 50 VDPPGCRNSAR 82
VDPPGCRNSAR
Sbjct: 1 VDPPGCRNSAR 11
>gi|7476650|pir||B70553 hypothetical protein Rv1137c - Mycobacterium
tuberculosis (strain H37RV) >gi|2117175|emb|CAB09025.1| (Z95584)
hypothetical protein Rv1137c [Mycobacterium tuberculosis]
Length = 122
Frame -2 hits (HSPs): __________
Frame -3 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 122
0 50 100
Minus Strand HSPs:
Score = 41 (14.4 bits), Expect = 3.3, Sum P(2) = 0.96
Identities = 7/21 (33%), Positives = 12/21 (57%), Frame = -3
Query: 63 PGGSTSSRAAATAVELLACVE 1
P +T+ + A+ LLAC +
Sbjct: 91 PSSTTTPSSTPQAIRLLACTD 111
Score = 39 (13.7 bits), Expect = 3.3, Sum P(2) = 0.96
Identities = 8/23 (34%), Positives = 12/23 (52%), Frame = -2
Query: 133 GSITSHQWNHESCCFTDSCRIPA 65
G+ T + H CF+ + R PA
Sbjct: 55 GAETMQRARHTGSCFSANARGPA 77
>gi|12328470|dbj|BAB21130.1| (AP002872) hypothetical protein [Oryza sativa]
Length = 234
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 234
0 50 100 150 200
Plus Strand HSPs:
Score = 45 (15.8 bits), Expect = 3.5, Sum P(2) = 0.97
Identities = 12/34 (35%), Positives = 16/34 (47%), Frame = +1
Query: 76 GTSP*NNSFHGSI-GGW*WNQNSGTCYLPLKYFW 174
GT+P N F G+ GG WN + L + W
Sbjct: 139 GTTPPKNVFSGAEDGGHDWNVAASVSALEKREDW 172
Score = 37 (13.0 bits), Expect = 3.5, Sum P(2) = 0.97
Identities = 8/22 (36%), Positives = 12/22 (54%), Frame = +2
Query: 2 STXARSSTAVAAALELVDPPGC 67
++ A + A AAA +PP C
Sbjct: 21 ASTAITLAAAAAAAATCEPPRC 42
>gi|3093383|emb|CAA06601.1| (AJ005572) hypothetical protein [Plasmodium
falciparum]
Length = 186
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | 186
0 50 100 150
Plus Strand HSPs:
Score = 63 (22.2 bits), Expect = 4.6, P = 0.99
Identities = 13/14 (92%), Positives = 13/14 (92%), Frame = +1
Query: 43 RTSGSPGLQEFGTS 84
RTSGSPGLQEF TS
Sbjct: 1 RTSGSPGLQEFCTS 14
>gi|11346107|pir||H82787 hypothetical protein XF0574 [imported] - Xylella
fastidiosa (strain 9a5c) >gi|9105438|gb|AAF83384.1|AE003904_5
(AE003904) hypothetical protein [Xylella fastidiosa]
Length = 136
Frame -2 hits (HSPs): _____________
Frame -3 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | 136
0 50 100
Minus Strand HSPs:
Score = 44 (15.5 bits), Expect = 4.7, Sum P(2) = 0.99
Identities = 13/35 (37%), Positives = 19/35 (54%), Frame = -2
Query: 157 ANSKCLSFGSITSHQWNHESCCFTDSCRIPAARGI 53
A S+C S + ++ H + CFT SC A RG+
Sbjct: 5 AMSRCRGVWSELA-RYRH-TYCFTFSCFGNATRGV 37
Score = 30 (10.6 bits), Expect = 4.7, Sum P(2) = 0.99
Identities = 6/13 (46%), Positives = 7/13 (53%), Frame = -3
Query: 45 SRAAATAVELLAC 7
SR A V +L C
Sbjct: 60 SRVQAVVVSILQC 72
>gi|100210|pir||S25299 extensin precursor - tomato >gi|170444|gb|AAA34164.1|
(M76671) extensin (class II) [Lycopersicon esculentum]
Length = 322
Frame -1 hits (HSPs): _____ __
Annotated Domains: ___ ________________________________________
__________________________________________________
Database sequence: | | | | | | | | 322
0 50 100 150 200 250 300
__________________
Annotated Domains:
DOMO DM08271: H-A-P-PREPEAT 69..249
DOMO DM05291: 251..322
Entrez domain: signal sequence 1..20
__________________
Minus Strand HSPs:
Score = 53 (18.7 bits), Expect = 5.6, Sum P(2) = 1.0
Identities = 13/34 (38%), Positives = 16/34 (47%), Frame = -1
Query: 128 HHQPPMEP*KLLFHGLVPNSCSPGDPLVLERPPP 27
HH PP P + H P+ SP P+ PPP
Sbjct: 86 HHSPP-PPSPVYDH---PSPSSPPPPVYYSPPPP 115
Score = 30 (10.6 bits), Expect = 5.6, Sum P(2) = 1.0
Identities = 5/7 (71%), Positives = 6/7 (85%), Frame = -1
Query: 35 PPPRWSS 15
PPP +SS
Sbjct: 284 PPPTYSS 290
>gi|7715060|gb|AAF67846.1|AF214016_2 (AF214016) molybdenum cofactor
synthesis-step 1 protein B splice type I [Mus musculus]
Length = 207
Frame -2 hits (HSPs): ___
Frame -3 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 207
0 50 100 150 200
Minus Strand HSPs:
Score = 43 (15.1 bits), Expect = 6.5, Sum P(2) = 1.0
Identities = 16/43 (37%), Positives = 21/43 (48%), Frame = -3
Query: 129 PSPATNGTMKAVVSRTRAEFLQPGGS--TSSRAAATAVELLACV 4
P P +N + V S RA + GG T A A+A+ LL V
Sbjct: 88 PGPTSN-QLTHVDSAGRASMVDVGGKPETERVAVASAMVLLGPV 130
Score = 35 (12.3 bits), Expect = 6.5, Sum P(2) = 1.0
Identities = 7/9 (77%), Positives = 8/9 (88%), Frame = -2
Query: 154 NSKCLSFGS 128
+SKCLS GS
Sbjct: 71 HSKCLSTGS 79
>gi|436130|emb|CAA54082.1| (X76634) ribulose-1,5-bisphosphate carboxylase
[Physcomitrella patens]
Length = 77
Frame 3 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | 77
0 20 40 60
Plus Strand HSPs:
Score = 57 (20.1 bits), Expect = 6.6, P = 1.0
Identities = 14/21 (66%), Positives = 15/21 (71%), Frame = +3
Query: 51 WIPRAAGIR---HESVKQQLS 104
WIPRAAGIR + S QQLS
Sbjct: 1 WIPRAAGIRGRQNPSKSQQLS 21
WARNING: HSPs involving 11 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.83
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.352 0.156 0.646
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.314 0.123 0.345 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.340 0.153 0.597
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.351 0.161 0.648
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.350 0.149 0.573
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.325 0.131 0.384
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 59 58 10. 58 3 12 22 0.093 30
26 0.089 30
+2 0 59 58 10. 58 3 12 23 0.12 29
26 0.12 29
+1 0 59 58 10. 58 3 12 22 0.093 30
26 0.089 30
-1 0 59 58 10. 58 3 12 22 0.093 30
26 0.089 30
-2 0 59 58 10. 58 3 12 22 0.093 30
26 0.089 30
-3 0 59 59 10. 58 3 12 22 0.095 30
26 0.094 30
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 61
No. of states in DFA: 580 (57 KB)
Total size of DFA: 120 KB (128 KB)
Time to generate neighborhood: 0.00u 0.01s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 73.28u 1.06s 74.34t Elapsed: 00:00:13
Total cpu time: 73.31u 1.11s 74.42t Elapsed: 00:00:13
Start: Mon Oct 1 21:02:18 2001 End: Mon Oct 1 21:02:31 2001
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000