R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 15 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|9294018|dbj|BAB01921.1| (AP001307) gb|AAC14054.1~gene_id:MMM17.14~similar
to unknown protein [Arabidopsis thaliana]
Length = 188
Frame 2 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | | 188
0 50 100 150
Plus Strand HSPs:
Score = 294 (103.5 bits), Expect = 5.3e-25, P = 5.3e-25
Identities = 59/91 (64%), Positives = 71/91 (78%), Frame = +2
Query: 2 WHPISLIVFVVLMAAWLFLYFLRDEPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIGNI 181
WHP SLIVF VL+ W+FLYFLRDEP+ +F I DR VLIV++VLTVVLLLLT A NI
Sbjct: 86 WHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNI 145
Query: 182 LVALLIGAVLVVAHAALRKTDDLFFDEXEAT 274
+ AL+ GAVLV+ H+ +RKT+DLF DE AT
Sbjct: 146 VGALVTGAVLVLIHSVVRKTEDLFLDEEAAT 176
>gi|9294017|dbj|BAB01920.1| (AP001307) gb|AAC14054.1~gene_id:MMM17.13~similar
to unknown protein [Arabidopsis thaliana]
Length = 188
Frame 2 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | | 188
0 50 100 150
Plus Strand HSPs:
Score = 282 (99.3 bits), Expect = 9.8e-24, P = 9.8e-24
Identities = 57/91 (62%), Positives = 68/91 (74%), Frame = +2
Query: 2 WHPISLIVFVVLMAAWLFLYFLRDEPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIGNI 181
WHP SLIVF L+ W+FLYFLRD PL +F I DR VLI ++V+T+VLLLLT A NI
Sbjct: 86 WHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNI 145
Query: 182 LVALLIGAVLVVAHAALRKTDDLFFDEXEAT 274
+ AL+ GAVLV+ HA +RKTDDLF DE AT
Sbjct: 146 VAALMAGAVLVLIHAVIRKTDDLFLDEEAAT 176
>gi|12323168|gb|AAG51564.1|AC027034_10 (AC027034) hypothetical protein;
89971-89402 [Arabidopsis thaliana]
Length = 189
Frame 2 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | | 189
0 50 100 150
Plus Strand HSPs:
Score = 275 (96.8 bits), Expect = 5.4e-23, P = 5.4e-23
Identities = 55/90 (61%), Positives = 70/90 (77%), Frame = +2
Query: 2 WHPISLIVFVVLMAAWLFLYFLRDEPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIGNI 181
+HP SLIV +L+ W+FLYFLRDEPL++FG I DR VLI ++VLTVV+LLLT A NI
Sbjct: 86 YHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNI 145
Query: 182 LVALLIGAVLVVAHAALRKTDDLFFDEXEA 271
L +LL AVLV+ HAA+R++D+LF DE A
Sbjct: 146 LGSLLTAAVLVLIHAAVRRSDNLFLDEEAA 175
>gi|9802742|gb|AAF99811.1|AC034257_3 (AC034257) Unknown protein [Arabidopsis
thaliana]
Length = 180
Frame 2 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | 180
0 50 100 150
Plus Strand HSPs:
Score = 273 (96.1 bits), Expect = 8.8e-23, P = 8.8e-23
Identities = 52/95 (54%), Positives = 73/95 (76%), Frame = +2
Query: 2 WHPISLIVFVVLMAAWLFLYFLRDEPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIGNI 181
W+P SL+V + L+ AWLFLYFLRDEPL +F R I R+VLI+M+V+T+ +L LT A NI
Sbjct: 86 WNPFSLLVLLALLGAWLFLYFLRDEPLTVFDREIDHRIVLIIMSVITLSILFLTDAKLNI 145
Query: 182 LVALLIGAVLVVAHAALRKTDDLFFDEXEATRLSP 286
VA++ GA+ V++HAA+RKT+DLF + E + L+P
Sbjct: 146 AVAIVAGALAVLSHAAVRKTEDLFQTDEETSLLNP 180
>gi|7485990|pir||T00733 hypothetical protein F22O13.28 - Arabidopsis thaliana
>gi|9802565|gb|AAF99767.1|AC003981_17 (AC003981) F22O13.26
[Arabidopsis thaliana]
Length = 209
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | 209
0 50 100 150 200
Plus Strand HSPs:
Score = 228 (80.3 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 45/105 (42%), Positives = 72/105 (68%), Frame = +2
Query: 2 WHPISLIVFVVLMAAWLFLYFLRD--EPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIG 175
+HP+S+I F+V+ W+ LYF RD + ++I G+ + D++VL++++++TV+ L+ T
Sbjct: 97 YHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGE 156
Query: 176 NILVALLIGAVLVVAHAALRKTDDLFFDEXEATRLSPPGAPLSGSPN 316
N+LV+L+IG ++V AH A R TDDLF DE A R G +GS N
Sbjct: 157 NVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARR---GGLVSAGSGN 200
>gi|11281603|pir||T47728 hypothetical protein F18O21.70 - Arabidopsis thaliana
>gi|7572909|emb|CAB87410.1| (AL163763) putative protein
[Arabidopsis thaliana]
Length = 209
Frame 2 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | 209
0 50 100 150 200
Plus Strand HSPs:
Score = 210 (73.9 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 40/90 (44%), Positives = 61/90 (67%), Frame = +2
Query: 5 HPISLIVFVVLMAAWLFLYFLR--DEPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIGN 178
HP+SL+V + L+ W+FLY R D+PL++FGR SDR L+ + + T+V++ +T ++G+
Sbjct: 95 HPLSLLVLIGLLGGWMFLYLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMT-SVGS 153
Query: 179 ILV-ALLIGAVLVVAHAALRKTDDLFFDEXE 268
+L AL+IG +V H A DDLF DE E
Sbjct: 154 LLTSALMIGVAIVCVHGAFVVPDDLFLDEQE 184
>gi|7487157|pir||T02509 hypothetical protein T19C21.15 - Arabidopsis thaliana
>gi|3395436|gb|AAC28768.1| (AC004683) unknown protein [Arabidopsis
thaliana]
Length = 220
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | 220
0 50 100 150 200
Plus Strand HSPs:
Score = 208 (73.2 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 48/112 (42%), Positives = 72/112 (64%), Frame = +2
Query: 5 HPISLIVFVVLMAAWLFLYFLR--DEPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIGN 178
HP SL+ + L+A+WLFLY R D+P+++FGR SDR L + + ++ ++ LT +G+
Sbjct: 105 HPFSLVFLLCLLASWLFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTD-VGS 163
Query: 179 ILV-ALLIGAVLVVAHAALRKTDDLFFDEXE--ATR-LS-PPGAPLSGSPNLL 322
+LV A++IG L+ AH A R +DLF DE E AT LS GA S +P ++
Sbjct: 164 VLVSAMMIGVALICAHGAFRAPEDLFLDEQEPAATGFLSFLGGAASSAAPAVI 216
>gi|4586054|gb|AAD25672.1|AC007020_14 (AC007020) unknown protein [Arabidopsis
thaliana]
Length = 213
Frame 2 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | 213
0 50 100 150 200
Plus Strand HSPs:
Score = 207 (72.9 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 41/90 (45%), Positives = 61/90 (67%), Frame = +2
Query: 5 HPISLIVFVVLMAAWLFLYFLR--DEPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIGN 178
HP SL+V + L+ +W+FLY R D+PL++FGR SDR L+ + + T+V++ +T ++G+
Sbjct: 97 HPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMT-SVGS 155
Query: 179 ILV-ALLIGAVLVVAHAALRKTDDLFFDEXE 268
+L AL IG +V H A R DDLF DE E
Sbjct: 156 LLTSALTIGIAIVCLHGAFRVPDDLFLDEQE 186
>gi|10176750|dbj|BAB09981.1| (AB010692)
emb|CAB87410.1~gene_id:K18I23.19~similar to unknown protein
[Arabidopsis thaliana]
Length = 217
Frame 2 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | | 217
0 50 100 150 200
Plus Strand HSPs:
Score = 207 (72.9 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 42/90 (46%), Positives = 61/90 (67%), Frame = +2
Query: 5 HPISLIVFVVLMAAWLFLYFLR--DEPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIGN 178
HP SL+V + L AW+FLY R D+PL++ GR SDR L V+ +LT+V++ LT ++G+
Sbjct: 98 HPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLT-SVGS 156
Query: 179 ILV-ALLIGAVLVVAHAALRKTDDLFFDEXE 268
+L AL+IG +V H A R +DLF D+ E
Sbjct: 157 LLTSALMIGFGIVCLHGAFRVPEDLFLDDQE 187
>gi|7487097|pir||T09929 hypothetical protein T16L4.170 - Arabidopsis thaliana
>gi|5123560|emb|CAB45326.1| (AL079344) putative protein
[Arabidopsis thaliana] >gi|7269865|emb|CAB79724.1| (AL161575)
putative protein [Arabidopsis thaliana]
Length = 272
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | | 272
0 50 100 150 200 250
Plus Strand HSPs:
Score = 192 (67.6 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 37/106 (34%), Positives = 63/106 (59%), Frame = +2
Query: 2 WHPISLIVFVVLMAAWLFLYFLRDEPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIGNI 181
W P+ L VFV+L+ AWL++Y +EP +IFG +I D +++V+ VLT+ + LLT I
Sbjct: 166 WQPVHLSVFVILIVAWLYVYSRDNEPWVIFGSVIDDSTLVLVLLVLTIGIFLLTDVSRGI 225
Query: 182 LVALLIGAVLVVAHAALRKTDDLFF---DEXEATRLSPPGAPLSGS 310
++ +L G +V+ H R+ ++ F D+ E ++ + LS S
Sbjct: 226 VIGVLAGLPVVLVHGMCRRNTEMLFVLEDDEEKVAMNTSSSSLSSS 271
>gi|1903367|gb|AAB70450.1| (AC000104) ESTs gb|N65789,gb|T04628 come from this
gene. [Arabidopsis thaliana]
Length = 182
Frame 2 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | 182
0 50 100 150
Plus Strand HSPs:
Score = 190 (66.9 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 42/101 (41%), Positives = 61/101 (60%), Frame = +2
Query: 8 PISLIVFVVLMAAWLFLYFLRDEPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIGNILV 187
PI+++ F+ + AW FLYF R+EPL IFG I D +V +++ L++ L+ TG L
Sbjct: 72 PIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIGSLVTTGVWLRALT 131
Query: 188 ALLIGAVLVVAHAALRKTDDLFFDEXEATRLSPPGAPLSGS 310
+ G ++++ HAALR TDDL D+ E SP G LS S
Sbjct: 132 TVGFGVLVLILHAALRGTDDLVSDDLE----SPYGPMLSTS 168
>gi|11281601|pir||T48185 hypothetical protein F7A7.160 - Arabidopsis thaliana
>gi|7327823|emb|CAB82280.1| (AL161946) putative protein
[Arabidopsis thaliana]
Length = 223
Frame 2 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | | 223
0 50 100 150 200
Plus Strand HSPs:
Score = 187 (65.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 39/90 (43%), Positives = 57/90 (63%), Frame = +2
Query: 5 HPISLIVFVVLMAAWLFLYFLR--DEPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIGN 178
HP SLI+ + L A+WLFLY R D PLI+FGR S+ L + + T+ ++ T ++G+
Sbjct: 105 HPFSLILLLCLAASWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFT-SVGS 163
Query: 179 ILV-ALLIGAVLVVAHAALRKTDDLFFDEXE 268
+L+ AL+IG + H A R DDLF DE +
Sbjct: 164 VLISALMIGIATICVHGAFRAPDDLFLDEQD 194
>gi|11281602|pir||T48482 hypothetical protein T28J14.50 - Arabidopsis thaliana
>gi|7546689|emb|CAB87267.1| (AL163652) putative protein
[Arabidopsis thaliana] >gi|9759567|dbj|BAB11169.1| (AB010697)
emb|CAB87267.1~gene_id:MOJ9.28~similar to unknown protein
[Arabidopsis thaliana]
Length = 216
Frame 2 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 185 (65.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 39/91 (42%), Positives = 60/91 (65%), Frame = +2
Query: 5 HPISLIVFVVLMAAWLFLYFLR--DEPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIGN 178
HP +L + L A+WLFLYF R D+PL+I GR SD L ++ + TVV++ +T ++G+
Sbjct: 95 HPFALFLLASLAASWLFLYFFRPADQPLVIGGRTFSDLETLGILCLSTVVVMFMT-SVGS 153
Query: 179 ILVALL-IGAVLVVAHAALRKTDDLFFDEXEA 271
+L++ L +G + V H A R +DLF +E EA
Sbjct: 154 LLMSTLAVGIMGVAIHGAFRAPEDLFLEEQEA 185
>gi|9758750|dbj|BAB09114.1| (AB023029) gb|AAC83072.1~gene_id:K24C1.4~similar to
unknown protein [Arabidopsis thaliana]
Length = 186
Frame 2 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | | 186
0 50 100 150
Plus Strand HSPs:
Score = 170 (59.8 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 30/88 (34%), Positives = 55/88 (62%), Frame = +2
Query: 8 PISLIVFVVLMAAWLFLYFLRDEPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIGNILV 187
P++LIV ++A WL +F R++PLI++ + DR VL+ + + +V + T + N+ V
Sbjct: 88 PVALIVVGAIIALWLIFHFFREDPLILWSFQVGDRTVLLFLVLASVWAIWFTNSAVNLAV 147
Query: 188 ALLIGAVLVVAHAALRKTDDLFFDEXEA 271
+ +G +L + HA R +D+LF +E +A
Sbjct: 148 GVSVGLLLCIIHAVFRNSDELFLEEDDA 175
>gi|8778486|gb|AAF79494.1|AC002328_2 (AC002328) F20N2.7 [Arabidopsis thaliana]
Length = 187
Frame 2 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | | 187
0 50 100 150
Plus Strand HSPs:
Score = 162 (57.0 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 29/87 (33%), Positives = 54/87 (62%), Frame = +2
Query: 8 PISLIVFVVLMAAWLFLYFLRDEPLIIFGRLISDRVVLIVMAVLTVVLLLLTGAIGNILV 187
P++L+ +A WL LYF RD PL+++GR ISDRV++ + + ++ L ++ +++
Sbjct: 90 PMALVTVASFVAMWLLLYFYRDHPLVLYGRHISDRVIVFGLILGSLWALWFINSLQCLIL 149
Query: 188 ALLIGAVLVVAHAALRKTDDLFFDEXE 268
++ +L + HA +R +DDLF E +
Sbjct: 150 GVVTSVLLCLVHAIIRNSDDLFVQEKD 176
>gi|12597896|gb|AAG60204.1|AC084763_24 (AC084763) hypothetical protein [Oryza
sativa]
Length = 212
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | 212
0 50 100 150 200
Plus Strand HSPs:
Score = 115 (40.5 bits), Expect = 0.00011, P = 0.00011
Identities = 31/84 (36%), Positives = 46/84 (54%), Frame = +2
Query: 5 HPISLIVFVVLMAAWLFLY--FLRDEP-LIIFGRLISDRVVLIVMAVLTVVLLLLTGAIG 175
H S++ F++ + L LY LR P + RL+ R+V +V L + L GAI
Sbjct: 83 HRASML-FLMAASKGLLLYGGLLRVFPNSALLRRLLDRRLVALVFVALVLADLAAAGAIA 141
Query: 176 NILVALLIGAVLVVAHAALRKTDDL 250
N+L AL +G ++V HA+ R DDL
Sbjct: 142 NLLAALAVGVPVIVLHASFRVRDDL 166
>gi|7504006|pir||T16439 hypothetical protein F53A9.8 - Caenorhabditis elegans
>gi|746559|gb|AAC46563.1| (U23523) histidine-rich; contained in
tandem repeat [Caenorhabditis elegans]
Length = 87
Frame -2 hits (HSPs): ________________________________________________
__________________________________________________
Database sequence: | | | | | | 87
0 20 40 60 80
Minus Strand HSPs:
Score = 82 (28.9 bits), Expect = 0.027, P = 0.026
Identities = 24/71 (33%), Positives = 32/71 (45%), Frame = -2
Query: 217 HHQHRSDEQRHEDVAD-GA-GEKQQHDGEH---RHDDKHDAVAD*SSEDY*RFVAEEVEE 53
HH H DE HED + GA GE H G+H +H H A + + E E+
Sbjct: 13 HHDHH-DEHHHEDHHEHGADGEHVHHAGDHCDTQHGGNHQAGEHCAKTQHQD--GEHHEQ 69
Query: 52 EPRRHEHHEHDQRD 11
H+ H HD +
Sbjct: 70 HHDAHDSHAHDSHE 83
Score = 68 (23.9 bits), Expect = 1.1, P = 0.66
Identities = 11/29 (37%), Positives = 16/29 (55%), Frame = -2
Query: 187 HEDVADGAGEKQQHDGEHRHDDKHDAVAD 101
H++ G G+ H EH H+D H+ AD
Sbjct: 3 HQEHGHGDGDHHDHHDEHHHEDHHEHGAD 31
Score = 68 (23.9 bits), Expect = 1.1, P = 0.66
Identities = 24/61 (39%), Positives = 30/61 (49%), Frame = -2
Query: 217 HHQHRSDEQR------HEDVADG----AGE---KQQH-DGEH--RHDDKHDAVAD*SSED 86
HH+H +D + H D G AGE K QH DGEH +H D HD+ A S E
Sbjct: 25 HHEHGADGEHVHHAGDHCDTQHGGNHQAGEHCAKTQHQDGEHHEQHHDAHDSHAHDSHEG 84
Query: 85 Y 83
+
Sbjct: 85 H 85
>gi|8163873|gb|AAF73890.1|AF223972_1 (AF223972) non-classical Kazal type
inhibitor bdellin-KL [Hirudo nipponia]
Length = 155
Frame -2 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | | 155
0 50 100 150
Minus Strand HSPs:
Score = 91 (32.0 bits), Expect = 0.073, P = 0.070
Identities = 17/43 (39%), Positives = 24/43 (55%), Frame = -2
Query: 232 QRRVRHHQHRSD---EQRHEDVADGAGEKQQHDGEHRHDDKHD 113
+R+ HH+ D E+ H+D D E+ HD EH+ DD HD
Sbjct: 99 ERKDEHHEEGHDDHHEEGHDDHHDDEHEEDHHDDEHKEDDHHD 141
Score = 88 (31.0 bits), Expect = 0.19, P = 0.17
Identities = 22/69 (31%), Positives = 33/69 (47%), Frame = -2
Query: 232 QRRVRHHQHRSD---EQRHEDVADGAGEKQQHDGEHRHDDKHDAVAD*SSEDY*RFVAEE 62
+R+ HH+ D E+ H+D D E+ HD EH+ DD HD +E
Sbjct: 99 ERKDEHHEEGHDDHHEEGHDDHHDDEHEEDHHDDEHKEDDHHD---------------DE 143
Query: 61 VEEEPRRHEHHE 26
+E+ EHH+
Sbjct: 144 HKEDDHHEEHHD 155
Score = 88 (31.0 bits), Expect = 0.19, P = 0.17
Identities = 25/82 (30%), Positives = 40/82 (48%), Frame = -2
Query: 241 GFPQRRV-RHHQ---HRSD-EQRHEDVADGAGEKQQHDGEHRHDDKHDAVAD*SSED-Y* 80
GF + HH+ H+ + + H+D D G ++ H+GE R D+ H+ D E+ +
Sbjct: 60 GFVEHHEDEHHEGEEHKEEGHEGHDDHHDD-GHEEHHEGEERKDEHHEEGHDDHHEEGHD 118
Query: 79 RFVAEEVEEEPRRHEHHEHDQRD 11
+E EE+ EH E D D
Sbjct: 119 DHHDDEHEEDHHDDEHKEDDHHD 141
>gi|3064158|gb|AAC14225.1| (AF036414) mucin-like protein [Trypanosoma cruzi]
Length = 95
Frame -3 hits (HSPs): _____________________________________
__________________________________________________
Database sequence: | | | | | | 95
0 20 40 60 80
Minus Strand HSPs:
Score = 74 (26.0 bits), Expect = 0.22, P = 0.20
Identities = 24/76 (31%), Positives = 34/76 (44%), Frame = -3
Query: 297 GAPGGDNRVASXSSKNKSSVFLNAACATTNTAPMSSATRMLPMAPVRSSSTTVSTAMTIS 118
G G N+ A + +N TT AP ++ T P AP STT + A T +
Sbjct: 3 GPQGSKNKSADQTYQNGEDPAATTTTTTTTMAPTTTTTA--PQAP----STTTTEAPTTT 56
Query: 117 TTRSLINLPKIINGSS 70
+TR+ L +I G S
Sbjct: 57 STRAPSRLRRIDGGLS 72
>gi|10175381|dbj|BAB06479.1| (AP001516) BH2760~unknown conserved protein
[Bacillus halodurans]
Length = 380
Frame -2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 380
0 150 300
Minus Strand HSPs:
Score = 93 (32.7 bits), Expect = 0.34, P = 0.29
Identities = 23/70 (32%), Positives = 30/70 (42%), Frame = -2
Query: 214 HQHRSDEQRHE-DVADGAGEKQQHDGEHRHDDKHDAVAD*SSEDY*RFVAEEVEEEPRRH 38
H H E HE D D + E+ H GE HD H+ +D+ E EE H
Sbjct: 147 HDHSHGEYGHEEDDHDHSHEEHGH-GEDDHDHSHEEHGH-EEDDHDHSHEEHGHEEDDHH 204
Query: 37 EHHEHDQRDWM 5
HH+ D W+
Sbjct: 205 HHHDEDPHVWL 215
>gi|12721246|gb|AAK03010.1| (AE006132) FimA [Pasteurella multocida]
Length = 366
Frame -2 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | 366
0 150 300
Minus Strand HSPs:
Score = 92 (32.4 bits), Expect = 0.44, P = 0.35
Identities = 21/71 (29%), Positives = 32/71 (45%), Frame = -2
Query: 214 HQHRSDEQRHEDVADGAGEKQQHDGEHRHDDKHDAVAD*SSEDY*RFVAEEVEEEPRRHE 35
H+H D + D K +HD +H HD KHD D + + + + +H+
Sbjct: 129 HKHDHDHKHDHDHKHDHDHKHEHDHKHDHDHKHDH--DHKHDHAHKHEHDHKHDHEHKHD 186
Query: 34 H---HEHDQR-DW 8
H HEHD +W
Sbjct: 187 HAHGHEHDHSTNW 199
Score = 89 (31.3 bits), Expect = 1.0, P = 0.63
Identities = 24/78 (30%), Positives = 36/78 (46%), Frame = -2
Query: 250 QIIGFPQRRVRHHQHRSDE-QRHE-DVADGAGEKQQHDGEHRHDDKHDAVAD*SSEDY*R 77
+I G + H+H D +H+ D K HD +H HD KHD D+
Sbjct: 109 EIGGLLEGEAHDHKHEHDHTHKHDHDHKHDHDHKHDHDHKHEHDHKHDHDHK-HDHDHKH 167
Query: 76 FVAEEVEEEPRRHEH-HEHD 20
A + E + +H+H H+HD
Sbjct: 168 DHAHKHEHD-HKHDHEHKHD 186
>gi|6634477|emb|CAB64450.1| (AJ251974) hydrophilic acylated surface protein B
[Leishmania mexicana]
Length = 176
Frame -2 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | 176
0 50 100 150
Minus Strand HSPs:
Score = 86 (30.3 bits), Expect = 0.54, P = 0.42
Identities = 30/116 (25%), Positives = 50/116 (43%), Frame = -2
Query: 331 KQKEKIGGSRKRSTGRRQSSGLXFVEEQIIGFPQRRVRHHQHRSDEQ--RHED----VAD 170
K+ EK + +TG + G ++ G ++ H ++D +H+D D
Sbjct: 11 KEPEKRADNIDTTTGSNKKDGGHDHHQRTDGDGEKN-DHDGEKADGDAGKHDDDHHQKTD 69
Query: 169 GAGEKQQHDGEH------RHDDKHDAVAD*SSEDY*RFVAEEVEEEPRRHEHHEHDQR 14
G GEK HDGE +HDD H D E E+ + + +H+ +H Q+
Sbjct: 70 GDGEKNDHDGEKADGDAGKHDDDHHQKTDGDGEKN-DHDGEKADGDAGKHDDDDHHQK 126
>gi|1082603|pir||S53365 mucin 5AC (clone CEL2) - human (fragment)
>gi|563373|emb|CAA84030.1| (Z34276) mucin [Homo sapiens]
Length = 94
Frame -3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | | 94
0 20 40 60 80
Minus Strand HSPs:
Score = 69 (24.3 bits), Expect = 0.83, P = 0.57
Identities = 26/88 (29%), Positives = 42/88 (47%), Frame = -3
Query: 273 VASXSSKNKSSVFLNAACATTNTAPMSSATRMLPMAPVRSSSTTVST-AMTISTTRSLIN 97
V + S+ + S+ + TT + +++T +P S+STT +T A T STT
Sbjct: 7 VPTASTTSASTTSTTSGPGTTPSPVPTTSTISVPTTSTTSASTTSTTSASTTSTTSGPGT 66
Query: 96 LPKII-NGSSRRK*RKSHAAMSTTNTIS 16
P + S+ S + STT+TIS
Sbjct: 67 TPSPVPTTSTTSAPTTSTTSASTTSTIS 94
>gi|2352447|gb|AAC72445.1| (AF004379) orf81 [Streptococcus thermophilus
bacteriophage Sfi21]
Length = 81
Frame 3 hits (HSPs): ______________________________________________
__________________________________________________
Database sequence: | | | | | | 81
0 20 40 60 80
Plus Strand HSPs:
Score = 69 (24.3 bits), Expect = 0.83, P = 0.57
Identities = 22/74 (29%), Positives = 37/74 (50%), Frame = +3
Query: 300 FLDPPIFSFCFFL*ISYLVNLVNNFRFGLYA--------FALFRRG-NFHLESVCEERKM 452
FL P +F F L + ++ + NNF ++ F ++R H+ + C RK+
Sbjct: 6 FLQP-LFLFWSCLFVIFIFDKRNNFNAIIFIDPIVFSNLFKMYRNSVALHIYNCCRFRKI 64
Query: 453 FGEVKFLFLRFVNLI 497
F + +F+RFV LI
Sbjct: 65 FDVITNIFIRFVFLI 79
>gi|419748|pir||S31097 cold acclimation protein - spinach
>gi|2673888|gb|AAB88628.1| (M96259) 85 kDa cold acclimation protein
[Spinacia oleracea]
Length = 535
Frame -2 hits (HSPs): ____________
Annotated Domains: ___________ __________ _________________________
__________________________________________________
Database sequence: | | | | | 535
0 150 300 450
__________________
Annotated Domains:
DOMO DM02152: DEHYDRINS 1..85
DOMO DM00110: DEHYDRINS 87..113
DOMO DM00110: DEHYDRINS 134..157
DOMO DM02972: 159..203
DOMO DM00110: DEHYDRINS 205..233
DOMO DM00110: DEHYDRINS 268..295
DOMO DM02972: 297..348
DOMO DM00110: DEHYDRINS 350..377
DOMO DM02972: 379..401
DOMO DM00110: DEHYDRINS 403..428
DOMO DM02972: 430..487
DOMO DM00110: DEHYDRINS 489..516
PROSITE DEHYDRIN_2: Dehydrins signature 2. 105..112
PROSITE DEHYDRIN_2: Dehydrins signature 2. 151..158
PROSITE DEHYDRIN_2: Dehydrins signature 2. 182..189
PROSITE DEHYDRIN_2: Dehydrins signature 2. 225..232
PROSITE DEHYDRIN_2: Dehydrins signature 2. 287..294
PROSITE DEHYDRIN_2: Dehydrins signature 2. 333..340
PROSITE DEHYDRIN_2: Dehydrins signature 2. 369..376
PROSITE DEHYDRIN_2: Dehydrins signature 2. 420..427
PROSITE DEHYDRIN_2: Dehydrins signature 2. 508..515
__________________
Minus Strand HSPs:
Score = 91 (32.0 bits), Expect = 0.97, P = 0.62
Identities = 29/117 (24%), Positives = 59/117 (50%), Frame = -2
Query: 352 K*EIHRKKQKEKIGGSRKRSTGRRQSSGLXFVEEQIIGFPQRRVR-HHQHRSDEQRHEDV 176
K + H+ +++EK GG+ + + G +Q+ P HH H+ DE+ + V
Sbjct: 164 KQDYHQHQEEEKKGGALDKIKDKLPGQGNAGHTQQLYPAPDHNYNTHHVHQ-DEENKDSV 222
Query: 175 ADGAGEKQ--QHDGE----HRH--DDKHDAVAD*SSEDY*RFVAEEVEEEPRRHEHHEHD 20
D +K QH+ + H H ++K D+V D +D ++ + E++ + HH+ +
Sbjct: 223 LDKIKDKLPGQHEDKKNDYHHHQEEEKKDSVLD-KIKDK---MSGQHEDKKNDYHHHQEE 278
Query: 19 QR 14
++
Sbjct: 279 EK 280
Score = 89 (31.3 bits), Expect = 1.7, P = 0.82
Identities = 23/116 (19%), Positives = 53/116 (45%), Frame = -2
Query: 352 K*EIHRKKQKEKIGGSRKRSTGRRQSSGLXFVEEQIIGFPQRRVR-HHQHRSDEQRHEDV 176
K + H+ +++EK GG+ + + G +Q+ P HH H+ DE+ + V
Sbjct: 164 KQDYHQHQEEEKKGGALDKIKDKLPGQGNAGHTQQLYPAPDHNYNTHHVHQ-DEENKDSV 222
Query: 175 ADGAGEKQQHDGEHRHDDKHDAVAD*SSEDY*RFVAEEV--EEEPRRHEHHEHDQRD 11
D +K E + +D H + + + +++ + E +++++H H + +
Sbjct: 223 LDKIKDKLPGQHEDKKNDYHHHQEEEKKDSVLDKIKDKMSGQHEDKKNDYHHHQEEE 279
>gi|7295863|gb|AAF51163.1| (AE003581) CG17264 gene product [Drosophila
melanogaster]
Length = 704
Frame -3 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | | 704
0 150 300 450 600
Minus Strand HSPs:
Score = 91 (32.0 bits), Expect = 1.4, P = 0.74
Identities = 30/83 (36%), Positives = 43/83 (51%), Frame = -3
Query: 270 ASXSSKNKSSVFLNAACATTNTAPMSSATRMLPMAPVRSSSTTVSTAMTISTTRSLINLP 91
A + ++ L A TT TAP SS T M +A + +S+TT T MT+ + S +
Sbjct: 445 AQSDAAGATATTLGNAAVTT-TAPTSS-TLMQMLANMANSTTT--TLMTMMSGNSTLAAS 500
Query: 90 KIINGSSRRK*RKSHAAMSTTNT 22
+ +GS+ S AAMSTT T
Sbjct: 501 SVSSGSTSSSSSSSTAAMSTTTT 523
>gi|9634286 ref|NP_037825.1| ORF65 p6.9 DNA binding protein [Spodoptera exigua
nucleopolyhedrovirus] >gi|6960525|gb|AAF33595.1|AF169823_65
(AF169823) ORF65 p6.9 DNA binding protein [Spodoptera exigua
nucleopolyhedrovirus]
Length = 75
Frame -2 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | | 75
0 20 40 60
Minus Strand HSPs:
Score = 67 (23.6 bits), Expect = 1.4, P = 0.76
Identities = 19/63 (30%), Positives = 33/63 (52%), Frame = -2
Query: 334 KKQKEKIGGSRKRSTG-RRQSSGLXFVEEQIIGFPQRRVRHHQHRSDEQRHEDVADGAGE 158
+ + GG R+RS+G RR+SS + G+ +R R + RS +R + G G
Sbjct: 15 RSTRRSSGGYRRRSSGYRRRSSSNRRTYRRSSGYHRRPGRPRKRRSSRRR----SSGGGY 70
Query: 157 KQQH 146
+++H
Sbjct: 71 RRRH 74
>gi|7484702|pir||T10738 hypothetical protein FbLate-2 - sea-island cotton
>gi|1143224|gb|AAA84881.1| (U34401) FbLate-2 gene product
[Gossypium barbadense]
Length = 333
Frame -2 hits (HSPs): ___________________________________
__________________________________________________
Database sequence: | | | | 333
0 150 300
Minus Strand HSPs:
Score = 87 (30.6 bits), Expect = 1.5, P = 0.78
Identities = 28/114 (24%), Positives = 53/114 (46%), Frame = -2
Query: 367 FTKLTK*EIHRKKQKEKIGGSRKRSTGRRQSSGLXFVEEQIIGFPQRRVRHHQHRSDEQR 188
+ K K EIH K++K+K + +S +++ FP+ + +H E
Sbjct: 53 YPKHEKPEIH-KEEKQKPCKQHEEYHESHKSKEHEEYQKEKPEFPKLE-KPKEHEKHEVE 110
Query: 187 HEDVADGAGEKQQHDGEHRHDDKHDAVAD*SSEDY*RFVAEEVE-EEPRRHEHHE 26
+ + + E Q EH+H++ H++ E+Y + E + E+P+ HE HE
Sbjct: 111 YPKILEYK-ENQDEGKEHKHEEYHESRESKEHEEYEKEKPEFPKLEKPKEHEKHE 164
Score = 85 (29.9 bits), Expect = 2.6, P = 0.93
Identities = 28/108 (25%), Positives = 49/108 (45%), Frame = -2
Query: 346 EIHRKKQKEKIGGSRKRSTGRR--QSSGLXFVEEQIIGFPQRRVRHHQHRSDEQRHEDVA 173
EI K+K+ G K + +S E++ FP+ + +H E + +
Sbjct: 169 EIPEYKEKQDEGKEHKHEECHKSHESKEHEEYEKEKPNFPKGE-KPKEHEKHEVEYPKIP 227
Query: 172 DGAGEKQQHDGEHRHDDKHDAVAD*SSEDY*RFVAEEVE-EEPRRHEHHE 26
+ EKQ EH+HD+ H++ E+Y + + E+P+ HE HE
Sbjct: 228 EYK-EKQDEGKEHKHDECHESHELKEHEEYEKEKPNFPKGEKPKEHEKHE 276
>gi|6324615 ref|NP_014685.1| Yor042wp [Saccharomyces cerevisiae]
>gi|2132035|pir||S66916 hypothetical protein YOR042w - yeast
(Saccharomyces cerevisiae) >gi|1420167|emb|CAA99232.1| (Z74949) ORF
YOR042w [Saccharomyces cerevisiae]
Length = 411
Frame -2 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | 411
0 150 300
Minus Strand HSPs:
Score = 88 (31.0 bits), Expect = 1.5, P = 0.79
Identities = 33/137 (24%), Positives = 58/137 (42%), Frame = -2
Query: 412 PLRKRAKAYKPNLKLFTKLTK*EIHRKKQKEKIGGSRKRSTGRRQSSGLXFVEEQIIGFP 233
P+RK +A P + T+L + E+ ++ E+ S R R +++ + + P
Sbjct: 153 PVRKNPEA--PARRRQTQLEQDELLARQLDEQFNSSHSRRRNRDRATRSMHEQRRRRHNP 210
Query: 232 QRRVRHHQHRSDEQRHED-VADGAGEKQQHDGEHRHDDKHDAVAD*SSEDY*RFVAEEVE 56
R +HH+ +E V E G D + V++ S+ Y R A E
Sbjct: 211 NEREQHHEDSEEEDSWSQFVEKDLPELTDRAGRSLQDTANK-VSNWISDAYRRNFASGNE 269
Query: 55 EEPRRHEHHEHDQRDWMP 2
+ +H H DQ++W P
Sbjct: 270 QNDNQHGHQ--DQQEWEP 285
>gi|7487086|pir||T04991 hypothetical protein T16L1.230 - Arabidopsis thaliana
>gi|3549676|emb|CAA20587.1| (AL031394) putative protein
[Arabidopsis thaliana] >gi|7270323|emb|CAB80091.1| (AL161584)
putative protein [Arabidopsis thaliana]
Length = 227
Frame -2 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | | 227
0 50 100 150 200
Minus Strand HSPs:
Score = 84 (29.6 bits), Expect = 1.8, P = 0.83
Identities = 24/78 (30%), Positives = 43/78 (55%), Frame = -2
Query: 217 HHQHRSDEQRHEDVADGAGEKQQ----HDGEHRHD---DKHDAVAD*SSEDY*RF---VA 68
+ +H +++ E+++ G EK++ +G H + D+ + VA+ ED + VA
Sbjct: 84 NEKHVEEDEDEEEISHGGEEKEKKSKVENGNHEEEVEKDEEEEVAEDDEEDKNKQGEEVA 143
Query: 67 EEVEEEPRRHEHHEHDQRD 11
EE EEE +HE E D++D
Sbjct: 144 EEDEEE-NKHEEDEIDEQD 161
>gi|6177896|dbj|BAA86073.1| (AB020482) heme-copper oxidase subunit IV
[Aeropyrum pernix]
Length = 103
Frame 2 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | | | 103
0 20 40 60 80 100
Plus Strand HSPs:
Score = 72 (25.3 bits), Expect = 1.9, P = 0.85
Identities = 21/55 (38%), Positives = 33/55 (60%), Frame = +2
Query: 5 HPISLIVFVVLMAAWLF-LYF--LRDEPLIIFGRLISDRVVLIVMAVLTVVLLLLT 163
+P ++ V L + L L+F LRDEP+II G +S VLI + +++ V +LT
Sbjct: 42 NPFVFVLAVALFQSSLIALFFQHLRDEPIIIRGITVSG-AVLIAILIISAVTSVLT 96
>gi|1361323|pir||D53203 hypothetical protein 4 - Desulfovibrio vulgaris (strain
Miyazaki) >gi|476040|dbj|BAA04828.1| (D21804) unnamed protein
product [Desulfovibrio vulgaris]
Length = 68
Frame -1 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | | 68
0 20 40 60
Minus Strand HSPs:
Score = 65 (22.9 bits), Expect = 2.4, P = 0.91
Identities = 19/42 (45%), Positives = 20/42 (47%), Frame = -1
Query: 269 PLXRRRTNHRFS------STPRA-PPPTPLR*AAPRGCCRWR 165
P RRR + R S PRA PPP R A R CRWR
Sbjct: 2 PARRRRASSRSSHPCRAVGPPRAAPPPVRSRWPARRSGCRWR 43
>gi|1175147|sp|P44526|ZNUA_HAEIN HIGH-AFFINITY ZINC UPTAKE SYSTEM PROTEIN ZNUA
>gi|1073823|pir||D64049 adhesin homolog HI0119 - Haemophilus
influenzae (strain Rd KW20) >gi|1573074|gb|AAC21794.1| (U32698)
conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 337
Frame -2 hits (HSPs): _________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 337
0 150 300
__________________
Annotated Domains:
DOMO DM06600: 1..56
DOMO DM08399: 58..272
DOMO DM06599: 274..336
Entrez Domain: HIS-RICH. 115..163
PFAM Lipoprotein_4: Adhesion lipoprotein 3..336
PRODOM PD002751: ADHS(4) ZNUA(2) 2..115
PRODOM PD002761: ADHS(4) ZNUA(2) 171..324
__________________
Minus Strand HSPs:
Score = 85 (29.9 bits), Expect = 2.6, P = 0.93
Identities = 23/69 (33%), Positives = 32/69 (46%), Frame = -2
Query: 217 HHQHRSDEQRHEDVADGAGEKQQHDGEHRHDDKHDAVAD*SSEDY*RFVAEEVEEEPRRH 38
HH+H HED G+ HD +H+H+ KHD D D+ + E H
Sbjct: 115 HHEHF-----HED-----GD---HDHDHKHEHKHDHKHD-HDHDH-----DHKHEHKHDH 155
Query: 37 EHHEHDQRD 11
EHH+HD +
Sbjct: 156 EHHDHDHHE 164
>gi|903866|gb|AAA74210.1| (L43851) surface antigen [Pneumocystis carinii]
Length = 288
Frame -2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | | 288
0 50 100 150 200 250
Minus Strand HSPs:
Score = 84 (29.6 bits), Expect = 2.8, P = 0.94
Identities = 20/54 (37%), Positives = 25/54 (46%), Frame = -2
Query: 172 DGAGEKQ-QHDGEHRHDDKHDAVAD*SSEDY*RFVAEEVEEEPRRHEHHEHDQRD 11
DG G+ +HD EH HD H+ + ED + E HEHH HD D
Sbjct: 200 DGDGDDDDEHDHEHGHDHDHEDGQEHEDEDG----HDHGHEHEDGHEHHHHDHDD 250
>gi|6651243|gb|AAF22235.1|AF152557_1 (AF152557) histidine and aspartic acid
rich protein [Pneumocystis carinii f. sp. carinii]
Length = 296
Frame -2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | | 296
0 50 100 150 200 250
Minus Strand HSPs:
Score = 84 (29.6 bits), Expect = 2.9, P = 0.94
Identities = 20/54 (37%), Positives = 25/54 (46%), Frame = -2
Query: 172 DGAGEKQ-QHDGEHRHDDKHDAVAD*SSEDY*RFVAEEVEEEPRRHEHHEHDQRD 11
DG G+ +HD EH HD H+ + ED + E HEHH HD D
Sbjct: 208 DGDGDDDDEHDHEHGHDHDHEDGQEHEDEDG----HDHGHEHEDGHEHHHHDHDD 258
>gi|12239366|gb|AAG49447.1|AF141344_1 (AF141344) LYST-interacting protein LIP8
[Homo sapiens]
Length = 119
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | 119
0 50 100
Plus Strand HSPs:
Score = 75 (26.4 bits), Expect = 2.9, P = 0.95
Identities = 26/64 (40%), Positives = 30/64 (46%), Frame = +3
Query: 123 SSWRCSPSCCCFSPAPSATSSWRCSSERCW-WWRTRR*GKPMICSSTXKRPLDCLLPV-- 293
S W S C + TSSWR S W WW+ R P C T RP C P+
Sbjct: 6 SDWPGSKREC--ANCRVGTSSWRSSG---WSWWKDCR---PC-CRPTGMRPTSCSAPLSR 56
Query: 294 -----LLFLDPP 314
LL +DPP
Sbjct: 57 RPTLKLLLMDPP 68
>gi|70792|pir||GACH protamine - chicken >gi|229596|prf||764186A protamine
[Gallus gallus]
Length = 65
Frame 1 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | | 65
0 20 40 60
Plus Strand HSPs:
Score = 64 (22.5 bits), Expect = 3.1, P = 0.95
Identities = 15/38 (39%), Positives = 20/38 (52%), Frame = +1
Query: 67 PRRTVNNLRKINQRPRRAYRHGGAHRRAAASHRRHRQH 180
PRR + R+ RR+ R GG RR S RR R++
Sbjct: 28 PRRRRSRRRRRYGSARRSRRSGGVRRRRYGSRRRRRRY 65
>gi|7509339|pir||T26452 hypothetical protein Y113G7C.1 - Caenorhabditis elegans
>gi|3979926|emb|CAA22059.1| (AL033509) predicted using
Genefinder~contains similarity to Pfam domain: PF00102
(Protein-tyrosine phosphatase), Score=110.1, E-value=1.3e-29, N=1;
PF02206 (Domain of unknown function), Score=70.8, E-value=9.2e-18,
N=1~cDNA EST yk18b9.3 comes from thi>
Length = 1494
Frame -2 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 1494
0 500 1000
Minus Strand HSPs:
Score = 91 (32.0 bits), Expect = 3.2, P = 0.96
Identities = 32/111 (28%), Positives = 52/111 (46%), Frame = -2
Query: 346 EIHRKKQKEKIGGSRKRSTGRRQSSGLXFVEEQIIGFPQRRVRHHQHRSDEQRHEDVADG 167
+IH K ++E+ +KR T Q +E +R++ + + DE+R +
Sbjct: 1012 KIHEKDREEE----KKRKTQDFQDQQDADIERAEADEQRRKMNVERAKKDEERAKKDKRD 1067
Query: 166 AGEKQQHDGEHRHDDKHDAV-AD*SSEDY*RFVAEEVEEEPR---RHEHHEHDQR 14
A E+++ D E DK DA A E + AE E E + RHE E D++
Sbjct: 1068 AEERRKKDEERAKKDKEDAKKAKEDQEKIDKLAAEVKEREEKSLARHEKEEEDEK 1122
>gi|11357492|pir||T48398 hypothetical protein F17C15.130 - Arabidopsis thaliana
>gi|7340656|emb|CAB82936.1| (AL162506) putative protein
[Arabidopsis thaliana]
Length = 81
Frame -2 hits (HSPs): __________________________________________
__________________________________________________
Database sequence: | | | | | | 81
0 20 40 60 80
Minus Strand HSPs:
Score = 63 (22.2 bits), Expect = 4.0, P = 0.98
Identities = 13/66 (19%), Positives = 30/66 (45%), Frame = -2
Query: 211 QHRSDEQRHEDVADGAGEKQQHDGEHRHDDKHDAVAD*SSEDY*RFVAEEVEEEPRRHEH 32
+ +E+ E+ + E+++ + E +++ + + E+ EE EEE E
Sbjct: 8 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEED 67
Query: 31 HEHDQR 14
E ++R
Sbjct: 68 REREER 73
Score = 62 (21.8 bits), Expect = 5.1, P = 0.99
Identities = 13/63 (20%), Positives = 29/63 (46%), Frame = -2
Query: 199 DEQRHEDVADGAGEKQQHDGEHRHDDKHDAVAD*SSEDY*RFVAEEVEEEPRRHEHHEHD 20
+E+ E+ + E+++ + E +++ + + E+ EE EEE E E +
Sbjct: 7 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 66
Query: 19 QRD 11
R+
Sbjct: 67 DRE 69
Score = 61 (21.5 bits), Expect = 6.7, P = 1.0
Identities = 13/62 (20%), Positives = 28/62 (45%), Frame = -2
Query: 196 EQRHEDVADGAGEKQQHDGEHRHDDKHDAVAD*SSEDY*RFVAEEVEEEPRRHEHHEHDQ 17
E+ E+ + E+++ + E +++ + + E+ EE EEE E E ++
Sbjct: 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 65
Query: 16 RD 11
D
Sbjct: 66 ED 67
>gi|2134214|pir||C58213 protamine II - American alligator
Length = 56
Frame 1 hits (HSPs): ________________________________________
Annotated Domains: __________
__________________________________________________
Database sequence: | | | | 56
0 20 40
__________________
Annotated Domains:
PROSITE PROTAMINE_P1: Protamine P1 signature. 1..12
__________________
Plus Strand HSPs:
Score = 63 (22.2 bits), Expect = 4.0, P = 0.98
Identities = 15/44 (34%), Positives = 21/44 (47%), Frame = +1
Query: 70 RRTVNNLRKINQRPRRAYRHGGAHRRAAASHRRHRQHPRGAAHR 201
R + R ++R RR +R G RR HR+H RG + R
Sbjct: 4 RHNRSRSRSRHRRRRRGHRGGRYRRRRRRGRYGHRRHHRGHSRR 47
>gi|4504487 ref|NP_002143.1| histidine-rich calcium-binding protein precursor
[Homo sapiens] >gi|134873|sp|P23327|SRCH_HUMAN SARCOPLASMIC
RETICULUM HISTIDINE-RICH CALCIUM-BINDING PROTEIN PRECURSOR
>gi|1082444|pir||A54660 histidine rich calcium binding protein -
human >gi|183919|gb|AAA88071.1| (M60052) histidine-rich calcium
binding protein [Homo sapiens]
Length = 699
Frame -1 hits (HSPs): ___
Frame -2 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | | 699
0 150 300 450 600
Minus Strand HSPs:
Score = 84 (29.6 bits), Expect = 4.5, Sum P(2) = 0.99
Identities = 27/80 (33%), Positives = 37/80 (46%), Frame = -2
Query: 256 EEQIIGFPQRRVRHHQHRSDEQRHEDVADGA---GEKQQHDGEHRHDDKHDAVAD*SSED 86
EE + + RH H S+E EDV+DG G +H G DD D D +D
Sbjct: 203 EEASTEYGHQAHRHRGHGSEED--EDVSDGHHHHGPSHRHQGHEEDDDDDDDDDDDDDDD 260
Query: 85 Y*RFVAEEVEEEPRRHEHH--EHDQ 17
V+ E + RH+ H E D+
Sbjct: 261 D---VSIEYRHQAHRHQGHGIEEDE 282
Score = 40 (14.1 bits), Expect = 4.5, Sum P(2) = 0.99
Identities = 10/27 (37%), Positives = 16/27 (59%), Frame = -1
Query: 350 IRNSQKEAEGED-WGIQKEEHREETIE 273
+R+ + +GED G ++EE EE E
Sbjct: 178 LRHGHRGHDGEDDEGEEEEEEEEEEEE 204
>gi|786117|gb|AAA98076.1| (L41834) nuclear protein [Ensis minor]
Length = 505
Frame -2 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | 505
0 150 300 450
Minus Strand HSPs:
Score = 85 (29.9 bits), Expect = 4.6, P = 0.99
Identities = 30/134 (22%), Positives = 62/134 (46%), Frame = -2
Query: 514 EKNSDIIKLTKRKKRNFTSPNIFLSSQTDSK*KFPLRKRAKAYKPNL-KLFTKLTK*EIH 338
+K S K + KKR+ + ++ S+ + +KR+K+ K + K +K K
Sbjct: 194 KKRSHSRKRSASKKRSHSRKRSASKKRSKSRKRSASKKRSKSRKRSASKKRSKSRKRSAS 253
Query: 337 RKKQKE-KIGGSRKRSTGRRQSSGLXFVEEQIIGFPQRRVRHHQHRSDEQRHEDVADGAG 161
+K+ K K S+KRS R++S+ + + ++R + + + ++R + A
Sbjct: 254 KKRSKSRKRSASKKRSKSRKRSASKKRSKSRKRSASKKRSKSRKRSASKKRSKSRKRSAS 313
Query: 160 EKQQHDGEHRHDDK 119
+K+ H + R K
Sbjct: 314 KKRSHSRKRRPSKK 327
>gi|9845306 ref|NP_064120.1| pr4.1 [rat cytomegalovirus Maastricht]
>gi|9800241|gb|AAF99115.1|AF232689_6 (AF232689) pr4.1 [rat
cytomegalovirus Maastricht]
Length = 247
Frame -3 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | | | 247
0 50 100 150 200
Minus Strand HSPs:
Score = 81 (28.5 bits), Expect = 4.8, P = 0.99
Identities = 33/117 (28%), Positives = 58/117 (49%), Frame = -3
Query: 432 QTPNENFPSEKGQKHINRT*NYLLN*PNKKFTERSRRRRLGDPERG-APGGD------NR 274
QTP+E+ P+ + + + + + + SRR R P+ +P G +R
Sbjct: 18 QTPDESSPAAPSESRASSDSSLVDGGARGGYGQSSRRNR---PQGSTSPSGSTSRPRRSR 74
Query: 273 VASXSSKNKSSVFLNAACATTNTAPMSSATRMLPMAPVRSSSTTVSTAMTISTTRSLINL 94
+S +S + SS ++A + + AP SS+ R P +P S +T ++ T STT S +
Sbjct: 75 SSSSASSSASSSASSSASSFPSDAP-SSSRRSPPTSPATSGPSTSLSSDTTSTTVSRSSS 133
Query: 93 P 91
P
Sbjct: 134 P 134
>gi|462338|sp|P35305|HSP1_DIDMA SPERM PROTAMINE P1 >gi|1071970|pir||S34045
protamine - North American opossum >gi|294036|gb|AAA02812.1|
(L17007) protamine 1 [Didelphis marsupialis]
>gi|407063|emb|CAA52193.1| (X74044) protamine P1 [Didelphis
marsupialis] >gi|598253|gb|AAA74612.1| (L35448) protamine P1
[Monodelphis domestica] >gi|1582108|prf||2117429A protamine P1
[Didelphis marsupialis] >gi|1582109|prf||2117429B protamine P1
[Monodelphis domestica]
Length = 58
Frame 1 hits (HSPs): _________________________________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | 58
0 20 40
__________________
Annotated Domains:
BLOCKS BL00048: Protamine P1 proteins. 1..27
DOMO DM01168: PROTAMINEP1 1..56
PFAM protamine_P1: Protamine P1 1..55
PRODOM PD001830: HSP1(29) VE2(21) GAG(12) 2..56
PROSITE PROTAMINE_P1: Protamine P1 signature. 2..12
__________________
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 5.1, P = 0.99
Identities = 17/39 (43%), Positives = 23/39 (58%), Frame = +1
Query: 70 RRTVNNLRKINQRPRRAYRHG-GAHRRAAASHRRHRQHPR 186
RR+ + R+ +R RR R G G HRR+ HRR R+ R
Sbjct: 21 RRSRSRRRRSRRRRRRRGRRGRGYHRRSP--HRRRRRRRR 58
>gi|10801034|emb|CAC12965.1| (AJ250175) putative metallothionein [Yarrowia
lipolytica]
Length = 54
Frame 3 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | 54
0 20 40
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 5.1, P = 0.99
Identities = 11/22 (50%), Positives = 12/22 (54%), Frame = +3
Query: 144 SCCCFSPAPSATSSWRCSSERC 209
SCCC PA T+S CS C
Sbjct: 28 SCCCSKPAEKPTNSCTCSKCAC 49
>gi|730133|sp|P40139|NG2_DROME NEW-GLUE PROTEIN 2 PRECURSOR (NG-2)
>gi|479421|pir||S33822 salivary glue protein ng-2 - fruit fly
(Drosophila melanogaster) >gi|296041|emb|CAA43951.1| (X61945) ng-2
[Drosophila melanogaster]
Length = 112
Frame -3 hits (HSPs): _______________________________________
Annotated Domains: ______________________________
__________________________________________________
Database sequence: | | | | 112
0 50 100
__________________
Annotated Domains:
Entrez Domain: 4 X 8 AA TANDEM REPEATS OF T-S-A 31..62
Entrez Repetitive region: 1. 31..38
Entrez Repetitive region: 2. 39..46
Entrez Repetitive region: 3. 47..54
Entrez Repetitive region: 4. 55..62
PRODOM PD044799: NG2_DROME 1..22
PRODOM PD000651: VL2(74) O18758(34) MUC2(10) 25..68
__________________
Minus Strand HSPs:
Score = 72 (25.3 bits), Expect = 5.3, P = 1.0
Identities = 20/85 (23%), Positives = 40/85 (47%), Frame = -3
Query: 267 SXSSKNKSSVFLNAACATTNTAPMSSATRMLPMAPVRSSSTTVSTAMTISTTRSLINLPK 88
+ +S + S+ +A ATT T+ ++ T +S ++ S T++ + + PK
Sbjct: 27 TTTSTSASATTTTSASATTTTSASATTTTSASATTTTASPSSSSKKKTVTHYKRKVKRPK 86
Query: 87 IINGSSRRK*RKSHAAMSTTNTISE 13
+ +RR+ +S S+ N SE
Sbjct: 87 KVRKITRRRGLRSRNGRSSRNRRSE 111
>gi|3242350|emb|CAA19671.1| (AL024484) EG:96G10.4 [Drosophila melanogaster]
Length = 112
Frame -3 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | 112
0 50 100
Minus Strand HSPs:
Score = 72 (25.3 bits), Expect = 5.3, P = 1.0
Identities = 20/85 (23%), Positives = 40/85 (47%), Frame = -3
Query: 267 SXSSKNKSSVFLNAACATTNTAPMSSATRMLPMAPVRSSSTTVSTAMTISTTRSLINLPK 88
+ +S + S+ +A ATT T+ ++ T +S ++ S T++ + + PK
Sbjct: 27 TTTSTSASATTTTSASATTTTSASATTTTSASATTTTASPSSSSKKKTVTHYKRKVKRPK 86
Query: 87 IINGSSRRK*RKSHAAMSTTNTISE 13
+ +RR+ +S S+ N SE
Sbjct: 87 KVRKITRRRGLRSRNGRSSRNRRSE 111
>gi|6018876|emb|CAB58070.1| (AL121805) BACN4L24.a [Drosophila melanogaster]
>gi|7290396|gb|AAF45854.1| (AE003426) ng2 gene product [Drosophila
melanogaster]
Length = 112
Frame -3 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | 112
0 50 100
Minus Strand HSPs:
Score = 72 (25.3 bits), Expect = 5.3, P = 1.0
Identities = 20/85 (23%), Positives = 40/85 (47%), Frame = -3
Query: 267 SXSSKNKSSVFLNAACATTNTAPMSSATRMLPMAPVRSSSTTVSTAMTISTTRSLINLPK 88
+ +S + S+ +A ATT T+ ++ T +S ++ S T++ + + PK
Sbjct: 27 TTTSTSASATTTTSASATTTTSASATTTTSASATTTTASPSSSSKKKTVTHYKRKVKRPK 86
Query: 87 IINGSSRRK*RKSHAAMSTTNTISE 13
+ +RR+ +S S+ N SE
Sbjct: 87 KVRKITRRRGLRSRNGRSSRNRRSE 111
>gi|11424081 ref|XP_008915.1| histidine-rich calcium-binding protein precursor
[Homo sapiens]
Length = 755
Frame -1 hits (HSPs): ___
Frame -2 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | || 755
0 150 300 450 600 750
Minus Strand HSPs:
Score = 84 (29.6 bits), Expect = 5.4, Sum P(2) = 1.0
Identities = 27/80 (33%), Positives = 37/80 (46%), Frame = -2
Query: 256 EEQIIGFPQRRVRHHQHRSDEQRHEDVADGA---GEKQQHDGEHRHDDKHDAVAD*SSED 86
EE + + RH H S+E EDV+DG G +H G DD D D +D
Sbjct: 259 EEASTEYGHQAHRHRGHGSEED--EDVSDGHHHHGPSHRHQGHEEDDDDDDDDDDDDDDD 316
Query: 85 Y*RFVAEEVEEEPRRHEHH--EHDQ 17
V+ E + RH+ H E D+
Sbjct: 317 D---VSIEYRHQAHRHQGHGIEEDE 338
Score = 40 (14.1 bits), Expect = 5.4, Sum P(2) = 1.0
Identities = 10/27 (37%), Positives = 16/27 (59%), Frame = -1
Query: 350 IRNSQKEAEGED-WGIQKEEHREETIE 273
+R+ + +GED G ++EE EE E
Sbjct: 234 LRHGHRGHDGEDDEGEEEEEEEEEEEE 260
>gi|85349|pir||PS0274 homeotic protein box6 - sea urchin (Parechinus angulosus)
(fragments)
Length = 88
Frame -1 hits (HSPs): ______
Frame -2 hits (HSPs): ___________________________
Annotated Domains: _________________________________
__________________________________________________
Database sequence: | | | | | | 88
0 20 40 60 80
__________________
Annotated Domains:
Entrez domain: homeobox homology #label HOX 9..65
PROSITE HOMEOBOX_1: 'Homeobox' domain signature. 41..64
__________________
Minus Strand HSPs:
Score = 55 (19.4 bits), Expect = 5.8, Sum P(2) = 1.0
Identities = 12/46 (26%), Positives = 25/46 (54%), Frame = -2
Query: 250 QIIGFPQRRVR-HHQHRSDEQRHEDVADGAGEKQQHDGEHRHDDKH 116
Q + +R+++ Q+R + + E V DG G+++ + + DD H
Sbjct: 43 QAVCLSERQIKIWFQNRRMKWKKERVRDGNGDEEDDEAKEGDDDVH 88
Score = 41 (14.4 bits), Expect = 5.8, Sum P(2) = 1.0
Identities = 6/11 (54%), Positives = 10/11 (90%), Frame = -1
Query: 476 EKEFHFTKHLS 444
EKEFH+ ++L+
Sbjct: 24 EKEFHYNRYLT 34
WARNING: HSPs involving 15 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=6.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.346 0.147 0.563
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.351 0.161 0.537
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.342 0.150 0.503
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.358 0.160 0.581
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.327 0.140 0.424
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.332 0.137 0.402
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 171 170 10. 75 3 12 22 0.11 34
31 0.11 37
+2 0 171 170 10. 75 3 12 22 0.11 34
31 0.11 37
+1 0 171 170 10. 75 3 12 22 0.11 34
31 0.11 37
-1 0 171 170 10. 75 3 12 22 0.11 34
31 0.11 37
-2 0 171 170 10. 75 3 12 22 0.11 34
31 0.11 37
-3 0 171 170 10. 75 3 12 22 0.11 34
31 0.11 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 65
No. of states in DFA: 587 (58 KB)
Total size of DFA: 189 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 191.94u 1.00s 192.94t Elapsed: 00:00:33
Total cpu time: 192.01u 1.04s 193.05t Elapsed: 00:00:33
Start: Mon Oct 1 17:26:41 2001 End: Mon Oct 1 17:27:14 2001
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000