R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|7485759|pir||T02677 hypothetical protein F19D11.4 - Arabidopsis thaliana
>gi|3510251|gb|AAC33495.1| (AC005310) unknown protein [Arabidopsis
thaliana]
Length = 603
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | || 603
0 150 300 450 600
Plus Strand HSPs:
Score = 533 (187.6 bits), Expect = 2.5e-50, P = 2.5e-50
Identities = 91/124 (73%), Positives = 107/124 (86%), Frame = +2
Query: 11 RSKDPLAPRLFQDILEEIEQIGLFKYGGLPHWGKNRNLAFLGAIKKYHYADKFLKVKEEY 190
R+KDPL+PRL++D +EEIEQI LFKY LPHWGKNRNLAF G IKKY FLKVKE Y
Sbjct: 468 RAKDPLSPRLYEDFIEEIEQIALFKYNALPHWGKNRNLAFDGVIKKYKNVPAFLKVKESY 527
Query: 191 DPQGLFSSLWTDQMLGLQEGVTILKDGCAMEGMCICSQDSHCAPKKGYFCRPGRIYKEAR 370
DP GLFSS WTDQ+LG++ VTI+KDGCA+EG+C+CS+D+HCAP KGYFCRPG++YKEAR
Sbjct: 528 DPMGLFSSEWTDQILGIKGNVTIIKDGCALEGLCVCSEDAHCAPTKGYFCRPGKVYKEAR 587
Query: 371 VCTR 382
VCTR
Sbjct: 588 VCTR 591
>gi|7485758|pir||T02676 hypothetical protein F19D11.3 - Arabidopsis thaliana
>gi|3510250|gb|AAC33494.1| (AC005310) unknown protein [Arabidopsis
thaliana]
Length = 570
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | 570
0 150 300 450
Plus Strand HSPs:
Score = 518 (182.3 bits), Expect = 9.6e-49, P = 9.6e-49
Identities = 88/124 (70%), Positives = 107/124 (86%), Frame = +2
Query: 11 RSKDPLAPRLFQDILEEIEQIGLFKYGGLPHWGKNRNLAFLGAIKKYHYADKFLKVKEEY 190
R+KDPL PRL++D +EEIEQI LFKY LPHWGKNRNLAF G I+KY+ A FLKVK+ Y
Sbjct: 439 RAKDPLTPRLYEDFIEEIEQIALFKYNALPHWGKNRNLAFDGVIRKYNNAPAFLKVKDSY 498
Query: 191 DPQGLFSSLWTDQMLGLQEGVTILKDGCAMEGMCICSQDSHCAPKKGYFCRPGRIYKEAR 370
DP+GLFSS WTDQ+LG++ +I+KDGCA+EG+CICS+D+HCAP KGY CRPG++YKEAR
Sbjct: 499 DPKGLFSSEWTDQILGIKGNASIVKDGCALEGLCICSKDAHCAPAKGYLCRPGKVYKEAR 558
Query: 371 VCTR 382
VCTR
Sbjct: 559 VCTR 562
>gi|7485757|pir||T02675 hypothetical protein F19D11.2 - Arabidopsis thaliana
>gi|3510249|gb|AAC33493.1| (AC005310) unknown protein [Arabidopsis
thaliana]
Length = 590
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 590
0 150 300 450
Plus Strand HSPs:
Score = 507 (178.5 bits), Expect = 1.4e-47, P = 1.4e-47
Identities = 88/123 (71%), Positives = 101/123 (82%), Frame = +2
Query: 11 RSKDPLAPRLFQDILEEIEQIGLFKYGGLPHWGKNRNLAFLGAIKKYHYADKFLKVKEEY 190
R+ DPL PRL++D +EEIEQI L KY LPHWGKNRNLAF G IKKY A FLKVKE Y
Sbjct: 464 RANDPLTPRLYEDFIEEIEQIALLKYNALPHWGKNRNLAFDGVIKKYKNAPAFLKVKESY 523
Query: 191 DPQGLFSSLWTDQMLGLQEGVTILKDGCAMEGMCICSQDSHCAPKKGYFCRPGRIYKEAR 370
DP GLFSS WTDQ+LG++ TI+KDGCA+EG+CICS D+HCAP KGY CRPG++YKEAR
Sbjct: 524 DPNGLFSSEWTDQILGIKGNPTIVKDGCALEGLCICSDDAHCAPSKGYLCRPGKVYKEAR 583
Query: 371 VCT 379
VCT
Sbjct: 584 VCT 586
>gi|10177848|dbj|BAB11277.1| (AB009049) gene_id:MCD7.26~pir||T02677~strong
similarity to unknown protein [Arabidopsis thaliana]
Length = 577
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | 577
0 150 300 450
Plus Strand HSPs:
Score = 505 (177.8 bits), Expect = 2.3e-47, P = 2.3e-47
Identities = 89/125 (71%), Positives = 108/125 (86%), Frame = +2
Query: 11 RSK-DPLAPRLFQDILEEIEQIGLFKYGGLPHWGKNRNLAFLGAIKKYHYADKFLKVKEE 187
RSK DPLAPRL++D +EEIEQ+ +FKY LPHWGKNRNLAF GAI+KY A+ FLKVKE+
Sbjct: 450 RSKNDPLAPRLYEDYIEEIEQMAIFKYNALPHWGKNRNLAFDGAIRKYKNANAFLKVKEK 509
Query: 188 YDPQGLFSSLWTDQMLGLQEGVTILKDGCAMEGMCICSQDSHCAPKKGYFCRPGRIYKEA 367
+D GLFS+ WTDQ+LGL+ VTI+K GCA+EG+CICS+DSHCAP KGY CRPG++Y+EA
Sbjct: 510 FDSLGLFSTEWTDQILGLKGNVTIVKQGCALEGLCICSEDSHCAPTKGYLCRPGKVYREA 569
Query: 368 RVCTR 382
RVCTR
Sbjct: 570 RVCTR 574
>gi|12597859|gb|AAG60168.1|AC084110_1 (AC084110) unknown protein [Arabidopsis
thaliana]
Length = 595
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | 595
0 150 300 450
Plus Strand HSPs:
Score = 502 (176.7 bits), Expect = 4.8e-47, P = 4.8e-47
Identities = 89/134 (66%), Positives = 110/134 (82%), Frame = +2
Query: 11 RSKD-PLAPRLFQDILEEIEQIGLFKYGGLPHWGKNRNLAFLGAIKKYHYADKFLKVKEE 187
RSKD PLAPRL++D +EEIEQ+ +FKY LPHWGKNRNLAF G I+KY A+ FLKVKE
Sbjct: 451 RSKDDPLAPRLYEDFIEEIEQMAIFKYNALPHWGKNRNLAFDGVIRKYKNANTFLKVKER 510
Query: 188 YDPQGLFSSLWTDQMLGLQEGVTILKDGCAMEGMCICSQDSHCAPKKGYFCRPGRIYKEA 367
+DP GLFS+ WT+Q+LGL+ VTI+K+GCA+EG+C+CS D+HCAPKKGY CRPG++Y +A
Sbjct: 511 FDPLGLFSTEWTNQILGLKGNVTIVKEGCALEGLCVCSDDAHCAPKKGYLCRPGKVYTKA 570
Query: 368 RVCTRDVKKTKEADD 412
RVCT VK DD
Sbjct: 571 RVCTH-VKSVNGYDD 584
>gi|10177846|dbj|BAB11275.1| (AB009049) gene_id:MCD7.24~pir||T02676~strong
similarity to unknown protein [Arabidopsis thaliana]
Length = 252
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | || 252
0 50 100 150 200 250
Plus Strand HSPs:
Score = 488 (171.8 bits), Expect = 1.4e-45, P = 1.4e-45
Identities = 88/124 (70%), Positives = 101/124 (81%), Frame = +2
Query: 11 RSKD-PLAPRLFQDILEEIEQIGLFKYGGLPHWGKNRNLAFLGAIKKYHYADKFLKVKEE 187
RSKD P PRL++D +EEIEQ+ + KY LPHWGKNRNLAF GAIKKY A+ FLKVKE
Sbjct: 125 RSKDDPWTPRLYEDYMEEIEQMAILKYNALPHWGKNRNLAFDGAIKKYKNANTFLKVKER 184
Query: 188 YDPQGLFSSLWTDQMLGLQEGVTILKDGCAMEGMCICSQDSHCAPKKGYFCRPGRIYKEA 367
DP GLFS+ WTDQ+LGL+ VTI+K GCA EG+CICS DSHCAP KGY CRPG++YKEA
Sbjct: 185 LDPWGLFSTEWTDQILGLKGNVTIVKQGCAPEGLCICSDDSHCAPNKGYMCRPGKVYKEA 244
Query: 368 RVCT 379
RVCT
Sbjct: 245 RVCT 248
>gi|8920604|gb|AAF81326.1|AC007767_6 (AC007767) Strong similarity to an unknown
protein F19D11.4 gi|7485759 from Arabidopsis thaliana BAC F19D11
gb|AC005310. EST gb|AV535485 comes from this gene
Length = 647
Frame 2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | 647
0 150 300 450 600
Plus Strand HSPs:
Score = 449 (158.1 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 78/113 (69%), Positives = 96/113 (84%), Frame = +2
Query: 11 RSKD-PLAPRLFQDILEEIEQIGLFKYGGLPHWGKNRNLAFLGAIKKYHYADKFLKVKEE 187
RSKD PLAPRL++D +EEIEQ+ +FKY LPHWGKNRNLAF G I+KY A+ FLKVKE
Sbjct: 451 RSKDDPLAPRLYEDFIEEIEQMAIFKYNALPHWGKNRNLAFDGVIRKYKNANTFLKVKER 510
Query: 188 YDPQGLFSSLWTDQMLGLQEGVTILKDGCAMEGMCICSQDSHCAPKKGYFCRP 346
+DP GLFS+ WT+Q+LGL+ VTI+K+GCA+EG+C+CS D+HCAPKKGY CRP
Sbjct: 511 FDPLGLFSTEWTNQILGLKGNVTIVKEGCALEGLCVCSDDAHCAPKKGYLCRP 563
>gi|11357471|pir||T48513 hypothetical protein F15N18.130 - Arabidopsis thaliana
>gi|7573411|emb|CAB87714.1| (AL163815) putative protein
[Arabidopsis thaliana]
Length = 585
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | 585
0 150 300 450
Plus Strand HSPs:
Score = 343 (120.7 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 63/122 (51%), Positives = 85/122 (69%), Frame = +2
Query: 11 RSKDPLAPRLFQDILEEIEQIGLFKYGGLPHWGKNRNLAFLGAIKKYH-YADKFLKVKEE 187
R+ D L PRL QD++EE+EQ+ K+G PHWGKNR + F G +K DKFL+VK +
Sbjct: 455 RADDELTPRLNQDVMEEMEQMAFVKHGAKPHWGKNRKVGFFGVKQKIGPNFDKFLEVKNK 514
Query: 188 YDPQGLFSSLWTDQMLGLQEGVTILK-DGCAMEGMCICSQDSHCAPKKGYFCRPGRIYKE 364
DP+ +FSS W+D++L G K DGCA+EG C+CS++ HC P KGYFC+ G +Y +
Sbjct: 515 LDPKKMFSSEWSDEIL---LGTEASKYDGCALEGNCVCSEERHCNPSKGYFCKEGLVYTQ 571
Query: 365 ARVC 376
ARVC
Sbjct: 572 ARVC 575
>gi|7431419|pir||D70989 probable oxidoreductase - Mycobacterium tuberculosis
(strain H37RV) >gi|3242248|emb|CAB09342.1| (Z95890) hypothetical
protein Rv1771 [Mycobacterium tuberculosis]
Length = 428
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 428
0 150 300
Plus Strand HSPs:
Score = 97 (34.1 bits), Expect = 0.21, P = 0.19
Identities = 20/66 (30%), Positives = 34/66 (51%), Frame = +2
Query: 41 FQDILEEIEQIGLFKYGGLPHWGKNRNLAFLGAIKKYHYADKFLKVKEEYDPQGLFSSLW 220
F+ +E+I + Y G PHWGK ++Y D+F V++ DP +F + +
Sbjct: 363 FESYFRAVEEI-MDDYAGRPHWGKRHYQTAATLRERYPQWDRFAAVRDRLDPDRVFLNDY 421
Query: 221 TDQMLG 238
T ++LG
Sbjct: 422 TRRVLG 427
>gi|11560006 ref|NP_071556.1| L-gulono-gamma-lactone oxidase [Rattus
norvegicus] >gi|121141|sp|P10867|GGLO_RAT L-GULONOLACTONE OXIDASE
(L-GULONO-GAMMA-LACTONE OXIDASE) >gi|204150|gb|AAA41164.1| (J03536)
L-gulono-gamma-lactone oxidase precursor [Rattus norvegicus]
Length = 440
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 440
0 150 300
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 1.9, P = 0.85
Identities = 22/67 (32%), Positives = 34/67 (50%), Frame = +2
Query: 32 PRLFQDILEEIEQIGLFKYGGLPHWGKNRNLAFLGAIKKYHYADKFLKVKEEYDPQGLFS 211
PRL D E I + K+GG PHW K N + Y KF ++E+ DP G+F
Sbjct: 375 PRL--DYWLAYETI-MKKFGGRPHWAKAHNCTQKDFEEMYPTFHKFCDIREKLDPTGMFL 431
Query: 212 SLWTDQM 232
+ + +++
Sbjct: 432 NSYLEKV 438
>gi|625202|pir||OXRTGU L-gulonolactone oxidase (EC 1.1.3.8) - rat
>gi|286224|dbj|BAA02232.1| (D12754) L-gulono-gamma-lactone oxidase
[Rattus norvegicus]
Length = 440
Frame 2 hits (HSPs): ________
Annotated Domains: _____
__________________________________________________
Database sequence: | | | | 440
0 150 300
__________________
Annotated Domains:
PROSITE OX2_COVAL_FAD: Oxygen oxidoreductases co 21..54
__________________
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 1.9, P = 0.85
Identities = 22/67 (32%), Positives = 34/67 (50%), Frame = +2
Query: 32 PRLFQDILEEIEQIGLFKYGGLPHWGKNRNLAFLGAIKKYHYADKFLKVKEEYDPQGLFS 211
PRL D E I + K+GG PHW K N + Y KF ++E+ DP G+F
Sbjct: 375 PRL--DYWLAYETI-MKKFGGRPHWAKAHNCTRKDFEEMYPTFHKFCDIREKLDPTGMFL 431
Query: 212 SLWTDQM 232
+ + +++
Sbjct: 432 NSYLEKV 438
>gi|12188976|emb|CAC21485.1| (AL512562) putative d-arabinono-1,4-lactone
oxidase [Schizosaccharomyces pombe]
Length = 461
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | 461
0 150 300 450
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 3.4, P = 0.97
Identities = 18/64 (28%), Positives = 34/64 (53%), Frame = +2
Query: 41 FQDILEEIEQIGLFKYGGLPHWGKNRNLAFLGAIKKYHYADKFLKVKEEYDPQGLFSSLW 220
++ + +E I +Y G PHW K +L +++Y K+L +++ DP+G+F W
Sbjct: 397 YKPYFKALEDIAN-QYNGKPHWAKEYSLTKEQLLERYPNLSKWLSLRKLLDPKGVF---W 452
Query: 221 TDQM 232
D +
Sbjct: 453 NDYL 456
>gi|7482785|pir||C69152 polyferredoxin - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2621463|gb|AAB84907.1| (AE000824)
polyferredoxin [Methanothermobacter thermautotrophicus]
Length = 337
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 337
0 150 300
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 8.2, P = 1.0
Identities = 22/54 (40%), Positives = 29/54 (53%), Frame = +2
Query: 251 VTILKDGCAMEGMC--ICSQDSHCAPKKGYFCRPGRIYKEARVCTRDVKKTKEAD 409
V IL DGC G C +C D+ ++G+ R GRIY E RV T + + E D
Sbjct: 227 VKIL-DGCVFCGRCRGVCPVDAIEITEEGFRARDGRIYLERRVLTGPRRGSVEVD 280
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.96
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.352 0.156 0.530
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.340 0.152 0.513
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.361 0.164 0.606
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.360 0.161 0.595
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.347 0.151 0.510
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.351 0.158 0.563
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 192 191 10. 76 3 12 22 0.12 34
31 0.098 38
+2 0 193 192 10. 76 3 12 22 0.12 34
31 0.098 38
+1 0 193 192 10. 76 3 12 22 0.12 34
31 0.098 38
-1 0 193 192 10. 76 3 12 22 0.12 34
31 0.098 38
-2 0 193 193 10. 76 3 12 22 0.12 34
31 0.099 38
-3 0 192 191 10. 76 3 12 22 0.12 34
31 0.098 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 13
No. of states in DFA: 595 (59 KB)
Total size of DFA: 219 KB (256 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 189.31u 0.87s 190.18t Elapsed: 00:01:14
Total cpu time: 189.35u 0.89s 190.24t Elapsed: 00:01:14
Start: Fri Jan 18 09:28:35 2002 End: Fri Jan 18 09:29:49 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000