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UniSTS:64747 Links
D2S428
Homo sapiens chromosome 2, polymorphic
Macaca mulatta chromosome 13
Pan troglodytes chromosome 2A

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:TCACTTAGCAAGTAAGATACAGCC
Reverse primer:AAACTAGAATCACAATAACCTCAGA
PCR product size:143-158 (bp), Homo sapiens
GenBank Accession:G08132

   Homo sapiens
Name: D2S428
Also known as: CHLC.1053 CHLC.GATA14B12 CHLC.GATA14B12.1053 CHLC.GATA14B12.P7109 GATA-D2S428 GATA-P7109 GATA14B12 GDB:686511 SHGC-17740 SHGC-4060
Polymorphism info: on genetic map

Cross References Help

Mapping InformationHelp
D2S428 Sequence Map: Chr 2|Celera Map Viewer
  Position: 82810064-82810216 (bp)
 
D2S428 Sequence Map: Chr 2 Map Viewer
  Position: 82835278-82835430 (bp)
 
D2S428 Sequence Map: Chr 2|HuRef Map Viewer
  Position: 82875367-82875515 (bp)
 
D2S428 deCODE Map: Chr 2 Map Viewer
  Position: 107.03 (cM)
 
GATA14B12 Marshfield Map: Chr 2 Map Viewer
  Position: 103.16 (cM)
 
SHGC-4060 NCBI RH Map: Chr 2 Map Viewer
  Position: 436.3 (cR)
  Lod score: 5.00
 
SHGC-17740 TNG Map: Chr 2 Map Viewer
  Position: 51460 (cR50000)
  Lod score: 3.5
  Reference Interval: 152
 
SHGC-4060 Stanford-G3 Map: Chr 2 Map Viewer
  Position: 3478 (cR10000)
  Lod score: F
  Reference Interval: 45
 
CHLC.GATA14B12.1053 Whitehead-RH Map: Chr 2 Map Viewer
  Position: 346.1 (cR3000)
  Lod score: P0.01
 
CHLC.GATA14B12.1053 Whitehead-YAC Map: Chr 2 Map Viewer
  Reference Interval: WC2.5

Electronic PCR results Help
Genomic (5 of 8)[Show All Hits]
G08132.1 5 .. 161 (157 bp)  
AC104799.4 115865 .. 116017 (153 bp)  
CH003449.1 82716942 .. 82717094 (153 bp)  
CH003497.1 85751536 .. 85751685 (150 bp)  
CH471053.2 82741999 .. 82742151 (153 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (2)
AC034300.2 60480 .. 60632 (153 bp)  
AC026893.3 7098 .. 7250 (153 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01019938.1 15908 .. 16060 (153 bp)  
AADC01016822.1 115912 .. 116061 (150 bp)  
AADB02001913.1 447427 .. 447579 (153 bp)  
ABBA01075698.1 64014 .. 64162 (149 bp)  
 

   Macaca mulatta
Name: D2S428
Polymorphism info:  
Mapping InformationHelp
D2S428 Sequence Map: Chr 13 Map Viewer
  Position: 83273395-83273508 (bp)

   Pan troglodytes
Name: D2S428
Polymorphism info:  
Mapping InformationHelp
D2S428 Sequence Map: Chr 2A Map Viewer
  Position: 84584762-84584903 (bp)

Electronic PCR results Help
Genomic (1)
CM000315.1 84584762 .. 84584903 (142 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01224359.1 3472 .. 3613 (142 bp)  
AACZ02022538.1 1388 .. 1529 (142 bp)  
 

 

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