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Finding cDNAs
UGID:175173     UniGene Hs.279209     Homo sapiens (human)   CCDC41 Order cDNA clone, Links
CDNA FLJ31754 fis, clone NT2RI2007469, highly similar to Homo sapiens NY-REN-58 antigen mRNA (CCDC41)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_001035858.1 NY-REN-58 antigen H. sapiens 100.0 700
XP_001141123.1 PREDICTED: NY-REN-58 antigen isoform 1 P. troglodytes 99.7 700
NP_081755.1 coiled-coil domain containing 41 M. musculus 89.0 691
NP_001089427.1 hypothetical protein LOC734477 X. laevis 65.6 707
XP_001345921.2 PREDICTED: similar to NY-REN-58 antigen D. rerio 61.4 696

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; thyroid; mammary gland; liver; vascular; testis; salivary gland; brain; mixed; eye; connective tissue; bone; embryonic tissue; kidney; skin; heart; muscle; ascites; ovary; lung; lymph node; uterus; intestine; stomach; mouth
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q22
UniSTS entry: Chr 12 RH102893
UniSTS entry: Chr 12 SHGC-54537
UniSTS entry: Chr 12 RH48920
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BC053614.1 Homo sapiens coiled-coil domain containing 41, mRNA (cDNA clone IMAGE:6141081), containing frame-shift errors PA
BC063398.1 Homo sapiens cDNA clone IMAGE:5197881, partial cds PA
NM_016122.2 Homo sapiens coiled-coil domain containing 41 (CCDC41), transcript variant 1, mRNA PA
AF155115.1 Homo sapiens NY-REN-58 antigen mRNA, complete cds P
BC107746.1 Homo sapiens coiled-coil domain containing 41, mRNA (cDNA clone IMAGE:6621591), partial cds PA
NM_001042399.1 Homo sapiens coiled-coil domain containing 41 (CCDC41), transcript variant 2, mRNA PA
BC125087.1 Homo sapiens coiled-coil domain containing 41, mRNA (cDNA clone MGC:149726 IMAGE:40117807), complete cds P
BC125086.1 Homo sapiens coiled-coil domain containing 41, mRNA (cDNA clone IMAGE:40117806), partial cds P
AK056316.1 Homo sapiens cDNA FLJ31754 fis, clone NT2RI2007469, highly similar to Homo sapiens NY-REN-58 antigen mRNA P
BC011009.1 Homo sapiens coiled-coil domain containing 41, mRNA (cDNA clone IMAGE:4076127), with apparent retained intron PA

EST sequences (81)

AA863014.1 Clone IMAGE:1456458 kidney 3' read A
AI139274.1 Clone IMAGE:1710508 uterus 3' read A
CB160132.1 Clone L18POOL1n1-49-B03 liver 5' read P
BX283278.1 Clone IMAGp958D12974_;_IMAGE:4101851 salivary gland P
BX283860.1 Clone IMAGp958N151127_;_IMAGE:4288334 muscle P
AI890198.1 Clone IMAGE:2442191 uterus 3' read A
AI927290.1 Clone IMAGE:2462483 kidney 3' read A
AW079265.1 Clone IMAGE:2574672 intestine 3' read A
F07672.1 Clone c-2eb03 brain
AW197843.1 Clone IMAGE:2701659 mixed 3' read PA
AW340406.1 Clone IMAGE:2907875 mixed 3' read A
AW341523.1 Clone IMAGE:2909142 mixed 3' read A
AW438818.1 Clone IMAGE:2778145 uterus 3' read A
CN363168.1 embryonic tissue 5' read P
CN363169.1 embryonic tissue 5' read P
AW965913.1 uncharacterized tissue P
CV333237.1 thyroid
DN993019.1 Clone TC114466 brain 5' read P
BP418671.1 Clone HIE01842r intestine 3' read P
BF132218.1 Clone IMAGE:4052203 kidney 5' read
BF132885.1 Clone IMAGE:4101851 salivary gland 5' read P
DN918016.1 Clone MCF7_RNA_L_24_E07 mammary gland
DN918017.1 Clone MCF7_RNA_L_24_E07 mammary gland P
BF695722.1 Clone IMAGE:4076127 brain 5' read
DA440413.1 Clone CTONG2008985 mouth 5' read
DA546072.1 Clone HCASM2003931 vascular 5' read P
BF056968.1 Clone IMAGE:3444285 uncharacterized tissue 3' read P
DA488692.1 Clone FCBBF2007259 brain 5' read P
DA704190.1 Clone NT2RI2007469 5' read
DB030850.1 Clone TESTI2014608 testis 5' read
BF574606.1 Clone IMAGE:4288334 muscle 5' read P
DB302764.1 Clone BRAMY2039714 brain 3' read P
DB187582.1 Clone TLIVE2007743 liver 5' read
DB086346.1 Clone TESTI4033935 testis 5' read
BF745376.1 mammary gland
DB323887.1 Clone NT2RI2007469 3' read P
DB095273.1 Clone TESTI4045875 testis 5' read
DB325207.1 Clone NT2RP8002632 testis 3' read A
DB098358.1 Clone TESTI4049833 testis 5' read
BG110052.1 Clone IMAGE:4367461 bone 5' read
DB449066.1 Clone H013039M16 testis 5' read
EB362520.1 Clone ki28f07 eye
DT217346.1 brain P
BG181633.1 connective tissue P
BG191296.1 connective tissue P
BG202317.1 connective tissue P
BG207542.1 connective tissue P
BG211737.1 connective tissue PA
BG219143.1 connective tissue P
BG461315.1 connective tissue P
BG682680.1 Clone IMAGE:4752801 skin 5' read P
BG772972.1 Clone IMAGE:4838023 testis 5' read
BG718777.1 Clone IMAGE:4828950 testis 5' read
BI753855.1 Clone IMAGE:5197881 brain 5' read P
BI771416.1 Clone IMAGE:5208588 mixed 5' read P
BI820458.1 Clone IMAGE:5176072 mixed 5' read P
BM462379.1 Clone IMAGE:5518030 uterus 5' read P
W52480.1 Clone IMAGE:340574 heart 3' read A
W52777.1 Clone IMAGE:340574 heart 5' read P
W56724.1 Clone IMAGE:340670 heart 5' read
W56770.1 Clone IMAGE:340670 heart 3' read A
BM758138.1 Clone S5SNU484-25-F09 stomach 5' read P
BM834532.1 Clone S11SNU1-63-G01 ascites 5' read P
BM836247.1 Clone S5SNU484s1-15-F04 stomach 5' read P
AL703827.1 Clone DKFZp686L2127 muscle 5' read P
AL705616.1 Clone DKFZp686M1336 muscle 5' read
BU176453.1 Clone IMAGE:6141081 eye 5' read
AA164604.1 Clone IMAGE:594403 ovary 3' read P
BU608784.1 Clone UI-CF-FN0-aeq-i-18-0-UI lung 3' read PA
BU616924.1 Clone UI-H-FH1-bfj-f-09-0-UI bone 3' read A
AA194905.1 Clone IMAGE:665050 mixed 3' read
BU854339.1 Clone IMAGE:6621591 testis 5' read P
CA424794.1 Clone UI-H-FE1-bdx-n-10-0-UI bone 3' read PA
CA448017.1 Clone UI-H-EI0-ayh-n-09-0-UI connective tissue 3' read A
AA360577.1 uncharacterized tissue 5' read P
AA286755.1 Clone IMAGE:700980 lymph node 5' read P
AA568651.1 Clone IMAGE:1057636 intestine 3' read
AA732557.1 Clone IMAGE:1302973 lymph node 3' read A
AA814246.1 Clone IMAGE:1286961 lymph node 3' read A
AA765427.1 Clone IMAGE:1304114 lymph node 3' read A
AA873647.1 Clone IMAGE:1358269 lymph node 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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