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Finding cDNAs
UGID:175173     UniGene Hs.279209     Homo sapiens (human)   CCDC41 Order cDNA clone, Links
CDNA FLJ31754 fis, clone NT2RI2007469, highly similar to Homo sapiens NY-REN-58 antigen mRNA (CCDC41)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_001035858.1 NY-REN-58 antigen H. sapiens 100.0 700
XP_001141123.1 PREDICTED: NY-REN-58 antigen isoform 1 P. troglodytes 99.7 700
NP_081755.1 coiled-coil domain containing 41 M. musculus 89.0 691
NP_001089427.1 hypothetical protein LOC734477 X. laevis 65.6 707
XP_001345921.2 PREDICTED: similar to NY-REN-58 antigen D. rerio 61.4 696

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; thyroid; mammary gland; liver; vascular; testis; salivary gland; brain; mixed; eye; connective tissue; bone; embryonic tissue; kidney; skin; heart; muscle; ascites; ovary; lung; lymph node; uterus; intestine; stomach; mouth
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q22
UniSTS entry: Chr 12 RH102893
UniSTS entry: Chr 12 SHGC-54537
UniSTS entry: Chr 12 RH48920
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BC053614.1 Homo sapiens coiled-coil domain containing 41, mRNA (cDNA clone IMAGE:6141081), containing frame-shift errors PA
BC063398.1 Homo sapiens cDNA clone IMAGE:5197881, partial cds PA
NM_016122.2 Homo sapiens coiled-coil domain containing 41 (CCDC41), transcript variant 1, mRNA PA
AF155115.1 Homo sapiens NY-REN-58 antigen mRNA, complete cds P
BC107746.1 Homo sapiens coiled-coil domain containing 41, mRNA (cDNA clone IMAGE:6621591), partial cds PA
NM_001042399.1 Homo sapiens coiled-coil domain containing 41 (CCDC41), transcript variant 2, mRNA PA
BC125087.1 Homo sapiens coiled-coil domain containing 41, mRNA (cDNA clone MGC:149726 IMAGE:40117807), complete cds P
BC125086.1 Homo sapiens coiled-coil domain containing 41, mRNA (cDNA clone IMAGE:40117806), partial cds P
AK056316.1 Homo sapiens cDNA FLJ31754 fis, clone NT2RI2007469, highly similar to Homo sapiens NY-REN-58 antigen mRNA P
BC011009.1 Homo sapiens coiled-coil domain containing 41, mRNA (cDNA clone IMAGE:4076127), with apparent retained intron PA

EST sequences (10 of 81) [Show all sequences]

AA863014.1 Clone IMAGE:1456458 kidney 3' read A
AI139274.1 Clone IMAGE:1710508 uterus 3' read A
CB160132.1 Clone L18POOL1n1-49-B03 liver 5' read P
BX283278.1 Clone IMAGp958D12974_;_IMAGE:4101851 salivary gland P
BX283860.1 Clone IMAGp958N151127_;_IMAGE:4288334 muscle P
AI890198.1 Clone IMAGE:2442191 uterus 3' read A
AI927290.1 Clone IMAGE:2462483 kidney 3' read A
AW079265.1 Clone IMAGE:2574672 intestine 3' read A
F07672.1 Clone c-2eb03 brain
AW197843.1 Clone IMAGE:2701659 mixed 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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