BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= AA01974
(147 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15602568|ref|NP_245640.1| hypothetical protein PM0703 [P... 171 1e-41
gi|42631507|ref|ZP_00157045.1| COG3092: Uncharacterized pro... 171 1e-41
gi|145639274|ref|ZP_01794880.1| hypothetical protein CGSHiI... 169 3e-41
gi|16273125|ref|NP_439361.1| hypothetical protein HI1205 [H... 169 6e-41
gi|145637040|ref|ZP_01792703.1| hypothetical protein CGSHiH... 169 6e-41
gi|32029675|ref|ZP_00132658.1| COG3092: Uncharacterized pro... 168 8e-41
gi|145641193|ref|ZP_01796773.1| hypothetical protein CGSHiR... 168 8e-41
gi|113460947|ref|YP_719014.1| hypothetical protein HS_0804 ... 167 1e-40
gi|145627813|ref|ZP_01783614.1| hypothetical protein CGSHi2... 167 2e-40
gi|68249751|ref|YP_248863.1| hypothetical protein NTHI1376 ... 164 1e-39
gi|152979368|ref|YP_001344997.1| protein of unknown functio... 162 4e-39
gi|52425056|ref|YP_088193.1| hypothetical protein MS1001 [M... 132 7e-30
gi|91211589|ref|YP_541575.1| hypothetical protein UTI89_C25... 116 4e-25
gi|157081978|gb|ABV11656.1| hypothetical protein CKO_00500 ... 116 4e-25
gi|24113667|ref|NP_708177.1| hypothetical protein SF2371 [S... 115 6e-25
gi|16130230|ref|NP_416798.1| conserved inner membrane prote... 115 6e-25
gi|16765663|ref|NP_461278.1| hypothetical protein STM2336 [... 115 6e-25
gi|16761261|ref|NP_456878.1| hypothetical protein STY2566 [... 115 7e-25
gi|26248682|ref|NP_754722.1| hypothetical protein c2836 [Es... 114 2e-24
gi|15802842|ref|NP_288869.1| hypothetical protein Z3556 [Es... 114 2e-24
gi|146312481|ref|YP_001177555.1| protein of unknown functio... 114 2e-24
gi|156933114|ref|YP_001437030.1| hypothetical protein ESA_0... 113 3e-24
gi|77975487|ref|ZP_00831022.1| COG3092: Uncharacterized pro... 112 5e-24
gi|123441668|ref|YP_001005652.1| hypothetical protein YE133... 112 6e-24
gi|77956854|ref|ZP_00820929.1| COG3092: Uncharacterized pro... 112 6e-24
gi|77960596|ref|ZP_00824460.1| COG3092: Uncharacterized pro... 112 7e-24
gi|47606297|sp|Q8GLH3|Y2295_PHOTE UPF0208 membrane protein ... 112 7e-24
gi|152971224|ref|YP_001336333.1| hypothetical protein KPN_0... 112 7e-24
gi|51596914|ref|YP_071105.1| hypothetical protein YPTB2595 ... 111 1e-23
gi|118065733|ref|ZP_01533993.1| protein of unknown function... 111 1e-23
gi|50121961|ref|YP_051128.1| hypothetical protein ECA3038 [... 110 2e-23
gi|16122782|ref|NP_406095.1| hypothetical protein YPO2564 [... 110 3e-23
gi|37526982|ref|NP_930326.1| hypothetical protein plu3094 [... 110 3e-23
gi|85059583|ref|YP_455285.1| hypothetical protein SG1605 [S... 106 3e-22
gi|28898855|ref|NP_798460.1| hypothetical protein VP2081 [V... 104 2e-21
gi|84393370|ref|ZP_00992129.1| hypothetical protein V12B01_... 103 3e-21
gi|54309951|ref|YP_130971.1| hypothetical protein PBPRA2797... 103 4e-21
gi|15641112|ref|NP_230744.1| hypothetical protein VC1099 [V... 103 4e-21
gi|116189075|ref|ZP_01478834.1| hypothetical protein VchoM_... 102 6e-21
gi|77976295|ref|ZP_00831796.1| COG3092: Uncharacterized pro... 102 7e-21
gi|116185170|ref|ZP_01475086.1| hypothetical protein VEx2w_... 102 8e-21
gi|62287986|sp|Q6LNF7|Y2797_PHOPR UPF0208 membrane protein ... 101 1e-20
gi|90412831|ref|ZP_01220831.1| hypothetical protein P3TCK_2... 101 1e-20
gi|156975214|ref|YP_001446121.1| hypothetical protein VIBHA... 101 1e-20
gi|153213544|ref|ZP_01948834.1| conserved hypothetical prot... 101 1e-20
gi|153824928|ref|ZP_01977595.1| conserved hypothetical prot... 101 1e-20
gi|86147941|ref|ZP_01066245.1| hypothetical protein MED222_... 101 1e-20
gi|116221220|ref|ZP_01486632.1| hypothetical protein VchoV5... 101 2e-20
gi|91227364|ref|ZP_01261753.1| hypothetical protein V12G01_... 101 2e-20
gi|32034954|ref|ZP_00135038.1| COG3092: Uncharacterized pro... 100 2e-20
gi|148977638|ref|ZP_01814214.1| hypothetical protein VSWAT3... 100 2e-20
gi|27365548|ref|NP_761076.1| hypothetical protein VV1_2222 ... 100 4e-20
gi|59711445|ref|YP_204221.1| hypothetical protein VF0838 [V... 98 2e-19
gi|33152733|ref|NP_874086.1| hypothetical protein HD1715 [H... 97 3e-19
gi|149188153|ref|ZP_01866448.1| hypothetical protein VSAK1_... 96 7e-19
gi|90579348|ref|ZP_01235158.1| hypothetical protein VAS14_0... 96 8e-19
gi|89072719|ref|ZP_01159284.1| hypothetical protein SKA34_1... 93 6e-18
gi|88860003|ref|ZP_01134642.1| hypothetical protein PTD2_18... 92 6e-18
gi|153091288|gb|EDN73262.1| hypothetical protein MHA_0278 [... 92 1e-17
gi|149909999|ref|ZP_01898648.1| hypothetical protein PE36_1... 89 7e-17
gi|109898684|ref|YP_661939.1| protein of unknown function D... 89 9e-17
gi|145300282|ref|YP_001143123.1| hypothetical protein ASA_3... 87 2e-16
gi|117619308|ref|YP_855435.1| hypothetical protein AHA_0892... 87 3e-16
gi|119774633|ref|YP_927373.1| hypothetical protein Sama_149... 87 4e-16
gi|119469284|ref|ZP_01612223.1| hypothetical protein ATW7_0... 86 7e-16
gi|124548773|ref|ZP_01707298.1| protein of unknown function... 86 7e-16
gi|120598446|ref|YP_963020.1| protein of unknown function D... 86 7e-16
gi|114772817|ref|ZP_01450141.1| hypothetical protein OM2255... 84 3e-15
gi|90407164|ref|ZP_01215352.1| hypothetical protein PCNPT3_... 84 3e-15
gi|91793760|ref|YP_563411.1| protein of unknown function DU... 83 6e-15
gi|88796618|ref|ZP_01112279.1| hypothetical protein MADE_19... 82 7e-15
gi|113951043|ref|ZP_01436642.1| protein of unknown function... 82 1e-14
gi|114047064|ref|YP_737614.1| protein of unknown function D... 82 1e-14
gi|24374441|ref|NP_718484.1| hypothetical protein SO_2914 [... 82 1e-14
gi|113969834|ref|YP_733627.1| protein of unknown function D... 82 1e-14
gi|126174882|ref|YP_001051031.1| protein of unknown functio... 82 1e-14
gi|127513320|ref|YP_001094517.1| protein of unknown functio... 81 2e-14
gi|47606292|sp|Q8ED56|Y2914_SHEON UPF0208 membrane protein ... 80 2e-14
gi|77360279|ref|YP_339854.1| hypothetical protein PSHAa1336... 78 2e-13
gi|150381546|ref|ZP_01920543.1| protein of unknown function... 78 2e-13
gi|114563645|ref|YP_751158.1| protein of unknown function D... 77 3e-13
gi|118757551|ref|ZP_01605301.1| protein of unknown function... 74 2e-12
gi|119946916|ref|YP_944596.1| inner membrane protein DUF412... 73 6e-12
gi|15832433|ref|NP_311206.1| hypothetical protein ECs3179 [... 70 3e-11
gi|118073541|ref|ZP_01541721.1| protein of unknown function... 64 3e-09
gi|56460560|ref|YP_155841.1| hypothetical protein IL1452 [I... 62 8e-09
gi|71278395|ref|YP_269871.1| hypothetical protein CPS_3175 ... 62 1e-08
>gi|15602568|ref|NP_245640.1| hypothetical protein PM0703 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|22654188|sp|Q9CMV2|Y703_PASMU UPF0208 membrane protein PM0703
gi|12720991|gb|AAK02787.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 147
Score = 171 bits (433), Expect = 1e-41, Method: Composition-based stats.
Identities = 92/147 (62%), Positives = 113/147 (76%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
M FF LK GQ YLK+WPLE KLG IFPENRVIK TLFAQKFMPFLAVF+I WQQ YA+S
Sbjct: 1 MYFFIFLKKGQHYLKSWPLESKLGMIFPENRVIKATLFAQKFMPFLAVFAITWQQVYAKS 60
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
D ALA+AV +A+ L +P+QG+YWLGKR+ TPL P+SAV F + E LK+ LPI
Sbjct: 61 DISALAIAVFSAIVALLIPLQGLYWLGKRSITPLSPQSAVWFYEICERLKQVNETLPILT 120
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
E+P Y +LA +L++AQ+KL + FWQ+L
Sbjct: 121 EQPNYQNLADVLKKAQRKLDKAFWQEL 147
>gi|42631507|ref|ZP_00157045.1| COG3092: Uncharacterized protein conserved in bacteria [Haemophilus
influenzae R2866]
Length = 147
Score = 171 bits (433), Expect = 1e-41, Method: Composition-based stats.
Identities = 91/147 (61%), Positives = 114/147 (77%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
M+FFS LK GQ YL TWPLE KLG IFPENR++K T FAQKFMPF+AVF+I+WQQFYA++
Sbjct: 1 MAFFSILKQGQIYLNTWPLEAKLGIIFPENRIMKATSFAQKFMPFVAVFAILWQQFYAKN 60
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
D +A ++A+LTALF LF+P QG+YWLGKRA TPL +SAV F + E LK++ LP
Sbjct: 61 DLMAFSIAILTALFALFIPFQGLYWLGKRANTPLENQSAVWFYDICERLKQQNEPLPFVQ 120
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
EKPTY LA +L++AQ K R FWQ++
Sbjct: 121 EKPTYQHLAEVLKKAQSKFERAFWQEI 147
>gi|145639274|ref|ZP_01794880.1| hypothetical protein CGSHiII_00949 [Haemophilus influenzae PittII]
gi|145271577|gb|EDK11488.1| hypothetical protein CGSHiII_00949 [Haemophilus influenzae PittII]
Length = 147
Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats.
Identities = 90/147 (61%), Positives = 113/147 (76%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
M+FFS LK GQ YL TWPLE KLG IFPENR++K T FAQKFMPF+AVF+I+WQQFYA++
Sbjct: 1 MAFFSILKQGQIYLNTWPLEAKLGIIFPENRIMKATSFAQKFMPFVAVFAILWQQFYAKN 60
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
D +A ++A+LTALF L +P QG+YWLGKRA TPL +SAV F + E LK++ LP
Sbjct: 61 DLMAFSIAILTALFALLIPFQGLYWLGKRANTPLENQSAVWFYDICERLKQQNEPLPFVQ 120
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
EKPTY LA +L++AQ K R FWQ++
Sbjct: 121 EKPTYQHLAEVLKKAQSKFERAFWQEI 147
>gi|16273125|ref|NP_439361.1| hypothetical protein HI1205 [Haemophilus influenzae Rd KW20]
gi|53732454|ref|ZP_00154389.2| COG3092: Uncharacterized protein conserved in bacteria [Haemophilus
influenzae R2846]
gi|1175578|sp|P44127|Y1205_HAEIN UPF0208 membrane protein HI1205
gi|1574135|gb|AAC22859.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
Length = 147
Score = 169 bits (427), Expect = 6e-41, Method: Composition-based stats.
Identities = 90/147 (61%), Positives = 112/147 (76%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
M+FFS K GQ YL TWPLE KLG IFPENR++K T FAQKFMPF+AVF+I+WQQFYA++
Sbjct: 1 MAFFSIFKQGQIYLNTWPLEAKLGIIFPENRIMKATSFAQKFMPFVAVFAILWQQFYAKN 60
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
D +A ++A+LTALF L +P QG+YWLGKRA TPL +SAV F + E LK+ LP
Sbjct: 61 DLMAFSIAILTALFALLIPFQGLYWLGKRANTPLENQSAVWFYDICERLKQLHEPLPFVQ 120
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
EKPTY LA +L++AQ KL R FWQ++
Sbjct: 121 EKPTYQHLAEVLKKAQSKLERAFWQEI 147
>gi|145637040|ref|ZP_01792703.1| hypothetical protein CGSHiHH_02233 [Haemophilus influenzae PittHH]
gi|145269694|gb|EDK09634.1| hypothetical protein CGSHiHH_02233 [Haemophilus influenzae PittHH]
Length = 147
Score = 169 bits (427), Expect = 6e-41, Method: Composition-based stats.
Identities = 90/147 (61%), Positives = 112/147 (76%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
M+FFS LK GQ YL TWPLE KLG IFPENR++K T FAQKFMPF+AVF+I+WQQFYA++
Sbjct: 1 MAFFSILKQGQIYLNTWPLEAKLGIIFPENRIMKATSFAQKFMPFVAVFAILWQQFYAKN 60
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
D +A ++A+LTALF L +P QG+YWLGKRA TPL +SAV F + E LK+ LP
Sbjct: 61 DLMAFSIAILTALFALLIPFQGLYWLGKRANTPLENQSAVWFYDICERLKQLHEPLPFVQ 120
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
EKPTY LA +L++AQ K R FWQ++
Sbjct: 121 EKPTYQHLAEVLKKAQSKFERAFWQEI 147
>gi|32029675|ref|ZP_00132658.1| COG3092: Uncharacterized protein conserved in bacteria [Haemophilus
somnus 2336]
Length = 144
Score = 168 bits (426), Expect = 8e-41, Method: Composition-based stats.
Identities = 92/144 (63%), Positives = 114/144 (79%), Gaps = 1/144 (0%)
Query: 4 FSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGI 63
+ TLK GQ+YL+TWP PKL IFPENRVIK TLFAQKFMPFLAVFS+VWQQ Y + D +
Sbjct: 2 YQTLKLGQRYLETWPSIPKLSIIFPENRVIKVTLFAQKFMPFLAVFSLVWQQVYIKHDLV 61
Query: 64 ALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKP 123
ALA+AVLTALF L LP+QG+YWLGKR+K PLPP++ V F ++ E L++K L + E+P
Sbjct: 62 ALAIAVLTALFALSLPLQGLYWLGKRSKLPLPPQTKVWFDKIVEVLQQKNTNL-VSIEQP 120
Query: 124 TYFDLAVLLRQAQQKLGRDFWQDL 147
TY DLA LLR+A+QKL +FWQ +
Sbjct: 121 TYQDLAGLLRKAEQKLDTEFWQSI 144
>gi|145641193|ref|ZP_01796773.1| hypothetical protein CGSHiR3021_05309 [Haemophilus influenzae
R3021]
gi|145274030|gb|EDK13896.1| hypothetical protein CGSHiR3021_05309 [Haemophilus influenzae
22.4-21]
Length = 147
Score = 168 bits (426), Expect = 8e-41, Method: Composition-based stats.
Identities = 89/147 (60%), Positives = 111/147 (75%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
M+FFS LK GQ YL TWPLE KLG IFPENR++K T FAQKFMPF+AVF+I+WQQFYA++
Sbjct: 1 MAFFSILKQGQIYLNTWPLEAKLGIIFPENRIMKATSFAQKFMPFVAVFAILWQQFYAKN 60
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
D +A ++A+LTALF L +P QG+YWLGKRA TPL +SAV F + E LK+ LP
Sbjct: 61 DLMAFSIAILTALFALLIPFQGLYWLGKRANTPLENQSAVWFYDICERLKQLHEPLPFVQ 120
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
EKPTY LA +L++AQ K R FW ++
Sbjct: 121 EKPTYQHLAEVLKKAQSKFERAFWHEI 147
>gi|113460947|ref|YP_719014.1| hypothetical protein HS_0804 [Haemophilus somnus 129PT]
gi|112822990|gb|ABI25079.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 144
Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats.
Identities = 92/144 (63%), Positives = 113/144 (78%), Gaps = 1/144 (0%)
Query: 4 FSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGI 63
+ TLK GQ YL+TWP PKL IFPENRVIK TLFAQKFMPFLAVFS+VWQQ Y + D +
Sbjct: 2 YQTLKLGQCYLETWPSIPKLSIIFPENRVIKVTLFAQKFMPFLAVFSLVWQQVYIKHDLV 61
Query: 64 ALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKP 123
ALA+AVLTALF L LP+QG+YWLGKR+K PLPP++ V F ++ E L++K L + E+P
Sbjct: 62 ALAIAVLTALFALSLPLQGLYWLGKRSKLPLPPQTKVWFDKIVEVLQQKNTNL-VSIEQP 120
Query: 124 TYFDLAVLLRQAQQKLGRDFWQDL 147
TY DLA LLR+A+QKL +FWQ +
Sbjct: 121 TYQDLAELLRKAEQKLDTEFWQSI 144
>gi|145627813|ref|ZP_01783614.1| hypothetical protein CGSHi22121_02210 [Haemophilus influenzae
22.1-21]
gi|145631255|ref|ZP_01787028.1| hypothetical protein CGSHi22421_04188 [Haemophilus influenzae
22.4-21]
gi|144979588|gb|EDJ89247.1| hypothetical protein CGSHi22121_02210 [Haemophilus influenzae
22.1-21]
gi|144983182|gb|EDJ90677.1| hypothetical protein CGSHi22421_04188 [Haemophilus influenzae
R3021]
Length = 147
Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats.
Identities = 89/147 (60%), Positives = 111/147 (75%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
M+FFS K GQ YL TWPLE KLG IFPENR++K T FAQKFMPF+AVF+I+WQQFYA++
Sbjct: 1 MAFFSIFKQGQIYLNTWPLEAKLGIIFPENRIMKATSFAQKFMPFVAVFAILWQQFYAKN 60
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
D +A ++A+LTALF L +P QG+YWLGKRA TPL +SAV F + E LK+ LP
Sbjct: 61 DLMAFSIAILTALFALLIPFQGLYWLGKRANTPLENQSAVWFYDICERLKQLHEPLPFVQ 120
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
EKPTY LA +L++AQ K R FWQ++
Sbjct: 121 EKPTYQHLAEVLKKAQSKFERAFWQEI 147
>gi|68249751|ref|YP_248863.1| hypothetical protein NTHI1376 [Haemophilus influenzae 86-028NP]
gi|145633064|ref|ZP_01788796.1| hypothetical protein CGSHi3655_05864 [Haemophilus influenzae 3655]
gi|145635054|ref|ZP_01790760.1| hypothetical protein CGSHiAA_02843 [Haemophilus influenzae PittAA]
gi|148826186|ref|YP_001290939.1| hypothetical protein CGSHiEE_06015 [Haemophilus influenzae PittEE]
gi|68057950|gb|AAX88203.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
gi|144986290|gb|EDJ92869.1| hypothetical protein CGSHi3655_05864 [Haemophilus influenzae 3655]
gi|145267662|gb|EDK07660.1| hypothetical protein CGSHiAA_02843 [Haemophilus influenzae PittAA]
gi|148716346|gb|ABQ98556.1| hypothetical protein CGSHiEE_06015 [Haemophilus influenzae PittEE]
Length = 147
Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats.
Identities = 87/147 (59%), Positives = 110/147 (74%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
M+FFS K GQ YL TWP E KLG IFPENR++K T FAQKFMPF+AVF+I+WQQ YA++
Sbjct: 1 MAFFSIFKQGQIYLNTWPQEAKLGIIFPENRIMKATSFAQKFMPFVAVFAILWQQIYAKN 60
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
D +A ++A+LTALF L +P QG+YWLGKRA +PL +SAV F + E LK++ LP
Sbjct: 61 DLMAFSIAILTALFALLIPFQGLYWLGKRANSPLENQSAVWFYDICERLKQQNEPLPFVQ 120
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
EKPTY LA +LR+AQ K R FWQ++
Sbjct: 121 EKPTYQHLAEVLRKAQSKFERAFWQEI 147
>gi|152979368|ref|YP_001344997.1| protein of unknown function DUF412 [Actinobacillus succinogenes
130Z]
gi|150841091|gb|ABR75062.1| protein of unknown function DUF412 [Actinobacillus succinogenes
130Z]
Length = 146
Score = 162 bits (411), Expect = 4e-39, Method: Composition-based stats.
Identities = 86/147 (58%), Positives = 110/147 (74%), Gaps = 1/147 (0%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
M+FF T+K GQ+YL+ WP PKL AIFPENRVI T FAQK MPFLAVF++VWQQ +++
Sbjct: 1 MAFFQTVKRGQRYLERWPSHPKLAAIFPENRVIGATKFAQKAMPFLAVFAVVWQQLFSKG 60
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
+ +A A AVLTALF L LP QG+YWLGKRA T LPP+SAV FQ ++ LK K L
Sbjct: 61 NNVAFAAAVLTALFALCLPFQGLYWLGKRANTKLPPQSAVKFQEIFSRLKNKGEIL-TPN 119
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
E+P + DLA LL++A++ LG+ FW++L
Sbjct: 120 EQPDFGDLADLLQKAEKHLGKSFWEEL 146
>gi|52425056|ref|YP_088193.1| hypothetical protein MS1001 [Mannheimia succiniciproducens MBEL55E]
gi|52307108|gb|AAU37608.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 122
Score = 132 bits (331), Expect = 7e-30, Method: Composition-based stats.
Identities = 70/122 (57%), Positives = 94/122 (77%), Gaps = 1/122 (0%)
Query: 26 IFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIALAVAVLTALFTLFLPMQGIYW 85
IFPENR+IK T FAQKFMPF+AVFS+VWQQFYA+SD +ALA+AVL A+ L +P+QG+YW
Sbjct: 2 IFPENRIIKATKFAQKFMPFIAVFSVVWQQFYAKSDLVALAIAVLCAIVALCIPLQGLYW 61
Query: 86 LGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTYFDLAVLLRQAQQKLGRDFWQ 145
LGKRA+T LP +SAV F + + L++K + E+PTY LA LL +AQ+ ++FW+
Sbjct: 62 LGKRAQTGLPAQSAVKFFEISKLLEKKNVTTSQI-ERPTYQHLADLLAKAQKHCTKEFWE 120
Query: 146 DL 147
+L
Sbjct: 121 EL 122
>gi|91211589|ref|YP_541575.1| hypothetical protein UTI89_C2577 [Escherichia coli UTI89]
gi|117624485|ref|YP_853398.1| hypothetical protein APECO1_4269 [Escherichia coli APEC O1]
gi|91073163|gb|ABE08044.1| hypothetical protein UTI89_C2577 [Escherichia coli UTI89]
gi|115513609|gb|ABJ01684.1| conserved hypothetical protein [Escherichia coli APEC O1]
Length = 151
Score = 116 bits (291), Expect = 4e-25, Method: Composition-based stats.
Identities = 70/147 (47%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++FFS + GQ Y KTWPLE +L +F ENRVIK T +A +FMP +AVF++ WQ +
Sbjct: 9 VNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTCYAIRFMPPIAVFTLCWQ----IA 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L AV TALF L LPMQG++WLGKR+ TPLPP F V L+E L
Sbjct: 65 LGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAILNWFYDVRGKLQESGQVLAPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
KP Y LA L++A ++L + F DL
Sbjct: 125 GKPDYQALADTLKRAFKQLDKTFLDDL 151
>gi|157081978|gb|ABV11656.1| hypothetical protein CKO_00500 [Citrobacter koseri ATCC BAA-895]
Length = 151
Score = 116 bits (290), Expect = 4e-25, Method: Composition-based stats.
Identities = 69/147 (46%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++FFS + GQ Y KTWP+E +L +F ENRVI+ T +A +FMP +AVF++ WQ +
Sbjct: 9 VNFFSLFRRGQHYAKTWPMEKRLAPVFVENRVIRMTRYAIRFMPPIAVFTLCWQI----A 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L AV TALF L LPMQG++WLGKR+ TPLPP F V L+E AL
Sbjct: 65 LGGQLGPAVATALFALSLPMQGMWWLGKRSVTPLPPSILNWFYEVRGKLQEAGQALSPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
KP Y LA L++A ++L + F DL
Sbjct: 125 GKPDYQALADTLKRAFKQLDKTFLDDL 151
>gi|24113667|ref|NP_708177.1| hypothetical protein SF2371 [Shigella flexneri 2a str. 301]
gi|30063721|ref|NP_837892.1| hypothetical protein S2506 [Shigella flexneri 2a str. 2457T]
gi|110806258|ref|YP_689778.1| hypothetical protein SFV_2362 [Shigella flexneri 5 str. 8401]
gi|38605578|sp|Q83KB1|YFBV_SHIFL UPF0208 membrane protein yfbV
gi|24052732|gb|AAN43884.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30041976|gb|AAP17702.1| hypothetical protein S2506 [Shigella flexneri 2a str. 2457T]
gi|110615806|gb|ABF04473.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 151
Score = 115 bits (289), Expect = 6e-25, Method: Composition-based stats.
Identities = 70/147 (47%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++FFS + GQ Y KTWPLE +L +F ENRVIK T +A +FMP +AVF++ WQ +
Sbjct: 9 VNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTRYAIRFMPPIAVFTLCWQ----IA 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L AV TALF L LPMQG++WLGKR+ TPLPP F V L+E L
Sbjct: 65 LGGLLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAILNWFYEVRGKLQESGQVLAPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
KP Y LA L++A ++L + F DL
Sbjct: 125 GKPDYQALADTLKRAFKQLDKTFLDDL 151
>gi|16130230|ref|NP_416798.1| conserved inner membrane protein [Escherichia coli K12]
gi|74312812|ref|YP_311231.1| hypothetical protein SSON_2352 [Shigella sonnei Ss046]
gi|75177917|ref|ZP_00697979.1| COG3092: Uncharacterized protein conserved in bacteria [Shigella
boydii BS512]
gi|75187077|ref|ZP_00700344.1| COG3092: Uncharacterized protein conserved in bacteria [Escherichia
coli E24377A]
gi|75196338|ref|ZP_00706408.1| COG3092: Uncharacterized protein conserved in bacteria [Escherichia
coli HS]
gi|75211698|ref|ZP_00711777.1| COG3092: Uncharacterized protein conserved in bacteria [Escherichia
coli B171]
gi|75230323|ref|ZP_00716813.1| COG3092: Uncharacterized protein conserved in bacteria [Escherichia
coli B7A]
gi|75238078|ref|ZP_00722083.1| COG3092: Uncharacterized protein conserved in bacteria [Escherichia
coli E110019]
gi|75243106|ref|ZP_00726812.1| COG3092: Uncharacterized protein conserved in bacteria [Escherichia
coli F11]
gi|75259753|ref|ZP_00731055.1| COG3092: Uncharacterized protein conserved in bacteria [Escherichia
coli E22]
gi|75512767|ref|ZP_00735269.1| COG3092: Uncharacterized protein conserved in bacteria [Escherichia
coli 53638]
gi|82544774|ref|YP_408721.1| hypothetical protein SBO_2330 [Shigella boydii Sb227]
gi|82777703|ref|YP_404052.1| hypothetical protein SDY_2491 [Shigella dysenteriae Sd197]
gi|83588278|ref|ZP_00926903.1| COG3092: Uncharacterized protein conserved in bacteria [Escherichia
coli 101-1]
gi|89109115|ref|AP_002895.1| conserved inner membrane protein [Escherichia coli W3110]
gi|110642499|ref|YP_670229.1| hypothetical protein YfbV [Escherichia coli 536]
gi|124526460|ref|ZP_01698413.1| protein of unknown function DUF412 [Escherichia coli B]
gi|67476560|sp|P0A8D9|YFBV_ECOLI UPF0208 membrane protein yfbV
gi|67476563|sp|P0A8E0|YFBV_ECO57 UPF0208 membrane protein yfbV
gi|1788632|gb|AAC75355.1| conserved inner membrane protein [Escherichia coli K12]
gi|1799663|dbj|BAA16130.1| conserved inner membrane protein [Escherichia coli W3110]
gi|73856289|gb|AAZ88996.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81241851|gb|ABB62561.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|81246185|gb|ABB66893.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|110344091|gb|ABG70328.1| hypothetical protein YfbV [Escherichia coli 536]
gi|124501931|gb|EAY49392.1| protein of unknown function DUF412 [Escherichia coli B]
gi|157067462|gb|ABV06717.1| putative inner membrane protein YfbV [Escherichia coli HS]
gi|157078289|gb|ABV17997.1| putative inner membrane protein YfbV [Escherichia coli E24377A]
Length = 151
Score = 115 bits (289), Expect = 6e-25, Method: Composition-based stats.
Identities = 70/147 (47%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++FFS + GQ Y KTWPLE +L +F ENRVIK T +A +FMP +AVF++ WQ +
Sbjct: 9 VNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTRYAIRFMPPIAVFTLCWQ----IA 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L AV TALF L LPMQG++WLGKR+ TPLPP F V L+E L
Sbjct: 65 LGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAILNWFYEVRGKLQESGQVLAPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
KP Y LA L++A ++L + F DL
Sbjct: 125 GKPDYQALADTLKRAFKQLDKTFLDDL 151
>gi|16765663|ref|NP_461278.1| hypothetical protein STM2336 [Salmonella typhimurium LT2]
gi|56412767|ref|YP_149842.1| hypothetical protein SPA0528 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62180907|ref|YP_217324.1| hypothetical protein SC2337 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|22654205|sp|Q8ZND7|YFBV_SALTY UPF0208 membrane protein yfbV
gi|62287945|sp|Q5PN46|YFBV_SALPA UPF0208 membrane protein yfbV
gi|16420878|gb|AAL21237.1| putative cytoplasmic protein [Salmonella typhimurium LT2]
gi|56127024|gb|AAV76530.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62128540|gb|AAX66243.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
Length = 151
Score = 115 bits (289), Expect = 6e-25, Method: Composition-based stats.
Identities = 69/147 (46%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++FFS + GQ Y KTWP+E +L +F ENRVI+ T +A +FMP +AVF++ WQ +
Sbjct: 9 VNFFSLFRRGQHYAKTWPMEKRLAPVFVENRVIRMTRYAIRFMPPVAVFTLCWQI----A 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L AV TALF L LPMQG++WLGKR+ TPLPP F V L+E AL
Sbjct: 65 LGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPSILNWFYEVRGKLQEAGQALAPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
KP Y LA L++A ++L + F DL
Sbjct: 125 GKPDYQALADTLKRAFKQLDKTFLDDL 151
>gi|16761261|ref|NP_456878.1| hypothetical protein STY2566 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141043|ref|NP_804385.1| hypothetical protein t0528 [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
gi|22654200|sp|Q8Z521|YFBV_SALTI UPF0208 membrane protein yfbV
gi|25303115|pir||AF0798 conserved hypothetical protein STY2566 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16503560|emb|CAD07568.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29136669|gb|AAO68234.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
Length = 151
Score = 115 bits (288), Expect = 7e-25, Method: Composition-based stats.
Identities = 69/147 (46%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++FFS + GQ Y KTWP+E +L +F ENRVI+ T +A +FMP +AVF++ WQ +
Sbjct: 9 VNFFSLFRRGQHYAKTWPMEKRLAPVFVENRVIRMTRYAIRFMPPVAVFTLCWQI----A 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L AV TALF L LPMQG++WLGKR+ TPLPP F V L+E AL
Sbjct: 65 LGGQLGPAVATALFALSLPMQGLWWLGKRSLTPLPPSILNWFYEVRGKLQEAGQALAPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
KP Y LA L++A ++L + F DL
Sbjct: 125 GKPDYQALADTLKRAFKQLDKTFLDDL 151
>gi|26248682|ref|NP_754722.1| hypothetical protein c2836 [Escherichia coli CFT073]
gi|31563261|sp|Q8FFJ2|YFBV_ECOL6 UPF0208 membrane protein yfbV
gi|26109087|gb|AAN81290.1|AE016763_249 Hypothetical protein yfbV [Escherichia coli CFT073]
Length = 151
Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats.
Identities = 70/147 (47%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++FFS GQ Y KTWPLE +L +F ENRVIK T +A +FMP +AVF++ WQ +
Sbjct: 9 VNFFSLFCRGQHYSKTWPLEKRLAPVFVENRVIKMTRYAIRFMPPIAVFTLCWQ----IA 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L AV TALF L LPMQG++WLGKR+ TPLPP F V L+E L
Sbjct: 65 LGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAILNWFYEVRGKLQESGQVLAPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
KP Y LA L++A ++L + F DL
Sbjct: 125 GKPDYQALADTLKRAFKQLDKTFLDDL 151
>gi|15802842|ref|NP_288869.1| hypothetical protein Z3556 [Escherichia coli O157:H7 EDL933]
gi|25303113|pir||D85870 hypothetical protein Z3556 [imported] - Escherichia coli (strain
O157:H7, substrain EDL933)
gi|12516648|gb|AAG57424.1|AE005461_9 orf, hypothetical protein [Escherichia coli O157:H7 EDL933]
Length = 151
Score = 114 bits (284), Expect = 2e-24, Method: Composition-based stats.
Identities = 69/147 (46%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++FFS + GQ Y KTWPLE +L +F ENRVIK T +A +FMP +AVF++ WQ +
Sbjct: 9 VNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTRYAIRFMPPIAVFTLCWQ----IA 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L AV TALF L LPMQG++WLG R+ TPLPP F V L+E L
Sbjct: 65 LGGQLGPAVATALFALSLPMQGLWWLGXRSVTPLPPAILNWFYEVRGKLQESGQVLAPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
KP Y LA L++A ++L + F DL
Sbjct: 125 GKPDYQALADTLKRAFKQLDKTFLDDL 151
>gi|146312481|ref|YP_001177555.1| protein of unknown function DUF412 [Enterobacter sp. 638]
gi|145319357|gb|ABP61504.1| protein of unknown function DUF412 [Enterobacter sp. 638]
Length = 151
Score = 114 bits (284), Expect = 2e-24, Method: Composition-based stats.
Identities = 70/147 (47%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+SFFS + GQ Y KTWPLE +L +F +NRVI+ T +A +FMP +AVF++ WQ +
Sbjct: 9 VSFFSLFRRGQLYAKTWPLEKRLAPVFVDNRVIRITRYAIRFMPPIAVFTLCWQI----A 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L AV TALF L LPMQG++WLGKR+ TPLPP F V L+E AL
Sbjct: 65 LGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPTILNWFYEVRGKLQEAGQALAPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
KP Y LA L++A ++L + F DL
Sbjct: 125 GKPDYQALADTLKRAFKQLDKTFLDDL 151
>gi|156933114|ref|YP_001437030.1| hypothetical protein ESA_00924 [Enterobacter sakazakii ATCC
BAA-894]
gi|156531368|gb|ABU76194.1| hypothetical protein ESA_00924 [Enterobacter sakazakii ATCC
BAA-894]
Length = 151
Score = 113 bits (283), Expect = 3e-24, Method: Composition-based stats.
Identities = 68/147 (46%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+SFFS + GQ Y KTWP + +L +F ENRVI+ T FA + MP +AVF++ WQ +
Sbjct: 9 VSFFSLFRRGQHYSKTWPTDKRLAPVFIENRVIRATRFAIRIMPPVAVFTLCWQI----A 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L AV TALF L +PMQG++WLGKR+ TPLPP + F V L+E AL
Sbjct: 65 LGGQLGPAVATALFALSMPMQGLWWLGKRSVTPLPPGTLNWFYEVRTKLQEAGQALAPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
KP Y LA L++A ++L + F DL
Sbjct: 125 GKPDYQALADTLKRAFKQLDKTFLDDL 151
>gi|77975487|ref|ZP_00831022.1| COG3092: Uncharacterized protein conserved in bacteria [Yersinia
frederiksenii ATCC 33641]
Length = 151
Score = 112 bits (281), Expect = 5e-24, Method: Composition-based stats.
Identities = 66/147 (44%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+S+F L+ GQ Y+KTWP + +L +FPENRV T F +FMP LA+F++ WQ +
Sbjct: 9 VSWFQVLQRGQHYMKTWPADKRLAPVFPENRVSTATRFGIRFMPPLAIFTLTWQI----A 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L A+ TALF LP+QG++WLGKRA TPLPP F V L E A+
Sbjct: 65 LGGQLGPAIATALFACGLPLQGLWWLGKRAITPLPPTLLQWFHEVRNKLAEAGQAVAPIE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
+ PTY LA LL++A ++L + F DL
Sbjct: 125 QTPTYQSLADLLKRAFKQLDKTFLDDL 151
>gi|123441668|ref|YP_001005652.1| hypothetical protein YE1335 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088629|emb|CAL11424.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 151
Score = 112 bits (280), Expect = 6e-24, Method: Composition-based stats.
Identities = 65/147 (44%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+S+F L+ GQ Y+KTWP + +L +FPENRV T F +FMP LA+F++ WQ +
Sbjct: 9 VSWFQVLQRGQHYMKTWPADKRLAPVFPENRVATATRFGIRFMPPLAIFTLTWQI----A 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L A+ TALF LP+QG++WLGKRA TPLPP F V L E A+
Sbjct: 65 LGGQLGPAIATALFACGLPLQGLWWLGKRAITPLPPTLLQWFHEVRNKLAEAGQAVAPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
+ PTY LA +L++A ++L + F DL
Sbjct: 125 QTPTYQSLADVLKRAFKQLDKTFLDDL 151
>gi|77956854|ref|ZP_00820929.1| COG3092: Uncharacterized protein conserved in bacteria [Yersinia
bercovieri ATCC 43970]
Length = 151
Score = 112 bits (280), Expect = 6e-24, Method: Composition-based stats.
Identities = 64/147 (43%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+++F L+ GQ Y+KTWP + +L +FPENRV+ T F +FMP LA+F++ WQ +
Sbjct: 9 VNWFQVLQRGQHYMKTWPADKRLAPMFPENRVVTATRFGIRFMPPLAIFTLTWQI----A 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L A+ TALF LP+QG++WLGKRA TPLPP F V L E A+
Sbjct: 65 LGGQLGPAIATALFACGLPLQGLWWLGKRAITPLPPTLLQWFHEVRNKLAEAGQAVAPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
+ PTY LA +L++A ++L + F DL
Sbjct: 125 QTPTYQSLAEVLKRAFKQLDKTFLDDL 151
>gi|77960596|ref|ZP_00824460.1| COG3092: Uncharacterized protein conserved in bacteria [Yersinia
mollaretii ATCC 43969]
Length = 151
Score = 112 bits (280), Expect = 7e-24, Method: Composition-based stats.
Identities = 64/147 (43%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+ +F L+ GQ Y+KTWP + +L +FPENRV+ T F +FMP LA+F++ WQ +
Sbjct: 9 LGWFQVLQRGQHYMKTWPADKRLAPMFPENRVVTATRFGIRFMPPLAIFTLTWQI----A 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L A+ TALF LP+QG++WLGKRA TPLPP F V L E A+
Sbjct: 65 LGGQLGPAIATALFACGLPLQGLWWLGKRAITPLPPTLLQWFHEVRNKLAEAGQAVSPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
+ PTY LA +L++A ++L + F DL
Sbjct: 125 QTPTYQSLADVLKRAFKQLDKTFLDDL 151
>gi|47606297|sp|Q8GLH3|Y2295_PHOTE UPF0208 membrane protein yfbV
gi|23092547|gb|AAN08358.1| b2295 [Photorhabdus temperata]
Length = 151
Score = 112 bits (280), Expect = 7e-24, Method: Composition-based stats.
Identities = 65/141 (46%), Positives = 88/141 (62%), Gaps = 4/141 (2%)
Query: 7 LKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIALA 66
++ GQQY+KTWP+E +L +FPENR+IK T F +FMP LA+F++ WQ + G L
Sbjct: 15 MQLGQQYMKTWPIEKQLAPMFPENRIIKATRFGIRFMPPLAIFTLTWQ----IALGGQLG 70
Query: 67 VAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTYF 126
AV TALF LPMQG++WLGKRA TPLP F + + E +A+ + PTY
Sbjct: 71 PAVATALFACSLPMQGLWWLGKRASTPLPATLLKWFHEIRDKFAEAGIAMAPVRQTPTYQ 130
Query: 127 DLAVLLRQAQQKLGRDFWQDL 147
LA LL+ A ++L R F D+
Sbjct: 131 SLAELLKLAFKQLDRSFLDDI 151
>gi|152971224|ref|YP_001336333.1| hypothetical protein KPN_02686 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150956073|gb|ABR78103.1| hypothetical protein KPN_02686 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 151
Score = 112 bits (280), Expect = 7e-24, Method: Composition-based stats.
Identities = 67/147 (45%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+SFFS GQ Y KTWPL+ +L +F ENR+I+ T +A + MP +A+F++ WQ +
Sbjct: 9 VSFFSLFNRGQHYAKTWPLDKRLAPVFIENRIIRATRYAIRIMPPIAIFTLCWQI----A 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L AV TALF L LPMQG++WLGKR+ TPLPP F V L+E AL
Sbjct: 65 LGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPSILNWFYEVRGKLQEAGQALAPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
KP Y LA L++A ++L + F DL
Sbjct: 125 GKPDYQALADTLKRAFKQLDKTFLDDL 151
>gi|51596914|ref|YP_071105.1| hypothetical protein YPTB2595 [Yersinia pseudotuberculosis IP
32953]
gi|153948163|ref|YP_001400423.1| hypothetical protein YpsIP31758_1444 [Yersinia pseudotuberculosis
IP 31758]
gi|62287979|sp|Q668Z2|Y2595_YERPS UPF0208 membrane protein YPTB2595
gi|51590196|emb|CAH21833.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|152959658|gb|ABS47119.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
Length = 151
Score = 111 bits (278), Expect = 1e-23, Method: Composition-based stats.
Identities = 66/147 (44%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+S+F L+ GQ Y+KTWP + +L +FPENRV T F +FMP LA+F++ WQ +
Sbjct: 9 VSWFQVLQRGQHYMKTWPADKRLAPVFPENRVTVVTRFGIRFMPPLAIFTLTWQI----A 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L A+ TALF LP+QG++WLGKRA TPLPP F V L E A+
Sbjct: 65 LGGQLGPAIATALFACGLPLQGLWWLGKRAITPLPPTLLQWFHEVRHKLSEAGQAVAPIE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
PTY LA LL++A ++L + F DL
Sbjct: 125 PIPTYQSLADLLKRAFKQLDKTFLDDL 151
>gi|118065733|ref|ZP_01533993.1| protein of unknown function DUF412 [Serratia proteamaculans 568]
gi|118019472|gb|EAV33384.1| protein of unknown function DUF412 [Serratia proteamaculans 568]
Length = 151
Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+S+F + GQ Y+KTWP + +L +FPENRV T FA +FMP LAVF++ WQ +
Sbjct: 9 VSWFQVFQRGQHYMKTWPSDKRLAPVFPENRVASATRFAVRFMPPLAVFTLTWQ----IA 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L A+ TALF +PMQG++WLG+R+ TPLPP F V L E A+
Sbjct: 65 LGGQLGPAIATALFACSMPMQGLWWLGRRSVTPLPPTLLQWFHEVRNKLAEAGQAVAPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
PTY LA LL++A ++L + F DL
Sbjct: 125 GTPTYQALADLLKRAFKQLDKTFLDDL 151
>gi|50121961|ref|YP_051128.1| hypothetical protein ECA3038 [Erwinia carotovora subsp. atroseptica
SCRI1043]
gi|62287982|sp|Q6D2Q7|Y3038_ERWCT UPF0208 membrane protein ECA3038
gi|49612487|emb|CAG75937.1| putative membrane protein [Erwinia carotovora subsp. atroseptica
SCRI1043]
Length = 151
Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+S+ L+ GQ Y+KTWP E +L +FPENRV + T F + MP LAVF++ WQ +
Sbjct: 9 ISWLQLLQRGQHYMKTWPAEKQLAPLFPENRVARATRFGIRIMPPLAVFTLTWQI----A 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L A+ TALF LP+QG++WLG+R+ TPLPP A F + L E AL
Sbjct: 65 LGGQLGPAIATALFACSLPLQGLWWLGRRSVTPLPPTLAQWFHEIRHKLLESGQALAPLE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
E PTY LA +L++A +L + F DL
Sbjct: 125 EAPTYQTLADVLKRAFNQLDKTFLDDL 151
>gi|16122782|ref|NP_406095.1| hypothetical protein YPO2564 [Yersinia pestis CO92]
gi|22125518|ref|NP_668941.1| hypothetical protein y1623 [Yersinia pestis KIM]
gi|45442164|ref|NP_993703.1| hypothetical protein YP_2375 [Yersinia pestis biovar Microtus str.
91001]
gi|77636563|ref|ZP_00798636.1| COG3092: Uncharacterized protein conserved in bacteria [Yersinia
pestis Angola]
gi|89105759|ref|ZP_01178273.1| COG3092: Uncharacterized protein conserved in bacteria [Yersinia
pestis biovar Orientalis str. IP275]
gi|108808049|ref|YP_651965.1| hypothetical protein YPA_2054 [Yersinia pestis Antiqua]
gi|108812319|ref|YP_648086.1| hypothetical protein YPN_2157 [Yersinia pestis Nepal516]
gi|145599252|ref|YP_001163328.1| hypothetical protein YPDSF_1972 [Yersinia pestis Pestoides F]
gi|149365530|ref|ZP_01887565.1| hypothetical protein YPE_0698 [Yersinia pestis CA88-4125]
gi|22654202|sp|Q8ZDJ8|Y2564_YERPE UPF0208 membrane protein YPO2564/y1623/YP_2375
gi|21958416|gb|AAM85192.1|AE013765_4 hypothetical protein y1623 [Yersinia pestis KIM]
gi|45437028|gb|AAS62580.1| conserved hypothetical protein [Yersinia pestis biovar Microtus
str. 91001]
gi|108775967|gb|ABG18486.1| hypothetical protein YPN_2157 [Yersinia pestis Nepal516]
gi|108779962|gb|ABG14020.1| hypothetical protein YPA_2054 [Yersinia pestis Antiqua]
gi|115348261|emb|CAL21189.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145210948|gb|ABP40355.1| hypothetical protein YPDSF_1972 [Yersinia pestis Pestoides F]
gi|149291943|gb|EDM42017.1| hypothetical protein YPE_0698 [Yersinia pestis CA88-4125]
Length = 151
Score = 110 bits (275), Expect = 3e-23, Method: Composition-based stats.
Identities = 66/147 (44%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+S+F L+ GQ Y+KTWP + +L +FPENRV T F +FMP LA+F++ WQ +
Sbjct: 9 VSWFQVLQRGQHYMKTWPADKRLAPVFPENRVTVVTRFGIRFMPPLAIFTLTWQ----IA 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L A+ TALF LP+QG++WLGKRA TPLPP F V L E A+
Sbjct: 65 LGGQLGPAIATALFACGLPLQGLWWLGKRAITPLPPTLLQWFHEVRHKLFEAGQAVAPIE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
PTY LA LL++A ++L + F DL
Sbjct: 125 PIPTYQSLADLLKRAFKQLDKTFLDDL 151
>gi|37526982|ref|NP_930326.1| hypothetical protein plu3094 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|47606256|sp|Q7N2I2|Y3094_PHOLL UPF0208 membrane protein plu3094
gi|36786415|emb|CAE15468.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 151
Score = 110 bits (274), Expect = 3e-23, Method: Composition-based stats.
Identities = 63/141 (44%), Positives = 87/141 (61%), Gaps = 4/141 (2%)
Query: 7 LKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIALA 66
++ GQQY+KTWP+E +L +FPENR+IK T F +FMP LA+F++ WQ + G L
Sbjct: 15 MQLGQQYMKTWPIEKQLAPMFPENRIIKATRFGIRFMPPLAIFTLTWQ----IALGGQLG 70
Query: 67 VAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTYF 126
AV TALF LPMQG++WLGKRA TPLP F + + + + + PTY
Sbjct: 71 PAVATALFACSLPMQGLWWLGKRASTPLPAALLKWFHEIRDKFAAAGITMAPVQQTPTYQ 130
Query: 127 DLAVLLRQAQQKLGRDFWQDL 147
LA LL++A ++L R F D+
Sbjct: 131 SLAELLKRAFKQLDRSFLDDI 151
>gi|85059583|ref|YP_455285.1| hypothetical protein SG1605 [Sodalis glossinidius str. 'morsitans']
gi|84780103|dbj|BAE74880.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 151
Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats.
Identities = 61/147 (41%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+S++ + GQ Y+K WP E L +FPE+RV++ T F +FMP +AVF++ WQ +
Sbjct: 9 VSWYKIFQRGQNYMKAWPAEKSLAPMFPEHRVVRATRFGVRFMPAVAVFTLTWQI----A 64
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
G L AV TA+F LPMQG++WLGKR+ TPLPP F V + L E +L
Sbjct: 65 LGGQLGPAVATAIFACSLPMQGLWWLGKRSITPLPPSLLTCFHEVRQKLNEAGQSLAPVE 124
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
PTY L +L++A + L + F DL
Sbjct: 125 GVPTYQMLVEVLKRAFKLLDKAFLDDL 151
>gi|28898855|ref|NP_798460.1| hypothetical protein VP2081 [Vibrio parahaemolyticus RIMD 2210633]
gi|153838160|ref|ZP_01990827.1| membrane protein [Vibrio parahaemolyticus AQ3810]
gi|31563244|sp|Q87MZ5|Y2081_VIBPA UPF0208 membrane protein VP2081
gi|28807074|dbj|BAC60344.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149748419|gb|EDM59278.1| membrane protein [Vibrio parahaemolyticus AQ3810]
Length = 150
Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/136 (39%), Positives = 86/136 (63%), Gaps = 2/136 (1%)
Query: 6 TLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIAL 65
+LK GQ Y++ WP+ +LGAIFPE R+IK T F K MP +A S++ Q + + AL
Sbjct: 10 SLKDGQSYMEIWPVRKELGAIFPEQRIIKATRFGIKVMPAVAAISVLTQMAFNNYN--AL 67
Query: 66 AVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTY 125
+++ ALF + LP+QGI+WLG R+ T LPP A ++ +++ + E AL +P Y
Sbjct: 68 PQSIVVALFAISLPLQGIWWLGARSNTKLPPSLASWYRELHQKIVETGFALEPVKARPRY 127
Query: 126 FDLAVLLRQAQQKLGR 141
+LA++L +A ++L +
Sbjct: 128 KELAIILNRAFRQLDK 143
>gi|84393370|ref|ZP_00992129.1| hypothetical protein V12B01_20291 [Vibrio splendidus 12B01]
gi|84375979|gb|EAP92868.1| hypothetical protein V12B01_20291 [Vibrio splendidus 12B01]
Length = 150
Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats.
Identities = 55/137 (40%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Query: 5 STLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIA 64
S+LK GQ+Y+ WP+ +L AIFPE R+IK T F K MP +A SI+ Q + + A
Sbjct: 9 SSLKDGQKYMDLWPVRKELNAIFPEQRIIKATRFGVKVMPAIAAISILTQMVFNNYN--A 66
Query: 65 LAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPT 124
+ AV+ ALF + LP+QG++WLG R+ T LPP ++ ++E + E AL +P
Sbjct: 67 MPQAVVMALFAISLPLQGMWWLGNRSNTQLPPALVSWYRELHEKISETGFALEPMKPRPR 126
Query: 125 YFDLAVLLRQAQQKLGR 141
Y +LA++L +A ++L +
Sbjct: 127 YKELAIILNRAFRQLDK 143
>gi|54309951|ref|YP_130971.1| hypothetical protein PBPRA2797 [Photobacterium profundum SS9]
gi|46914390|emb|CAG21169.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 170
Score = 103 bits (256), Expect = 4e-21, Method: Composition-based stats.
Identities = 55/140 (39%), Positives = 89/140 (63%), Gaps = 2/140 (1%)
Query: 2 SFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSD 61
+ + ++GQQY+ TWP+ +L AIFPE R IK T FA + MP +AV S++ Q +
Sbjct: 26 TVWQDFQNGQQYMATWPMRKELAAIFPEQRYIKATKFATRVMPAVAVMSVLSQMAFNNYG 85
Query: 62 GIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPE 121
AL A+ ALF L +P+QG++WLGKR++T LPP A+ ++ +YE + + A+ +
Sbjct: 86 --ALPQAMTVALFALTMPLQGLWWLGKRSRTTLPPSLAIWYREIYEKITSEGHAMQPLKK 143
Query: 122 KPTYFDLAVLLRQAQQKLGR 141
+P Y +LA +L +A ++L +
Sbjct: 144 QPRYLELAEVLNRAFKQLDK 163
>gi|15641112|ref|NP_230744.1| hypothetical protein VC1099 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|121587082|ref|ZP_01676859.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121726336|ref|ZP_01679626.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147673932|ref|YP_001216567.1| hypothetical protein VC0395_A0617 [Vibrio cholerae O395]
gi|153222164|ref|ZP_01952958.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|153802144|ref|ZP_01956730.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|153816934|ref|ZP_01969601.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153821870|ref|ZP_01974537.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|9655569|gb|AAF94258.1| conserved hypothetical protein [Vibrio cholerae O1 biovar eltor
str. N16961]
gi|121548717|gb|EAX58766.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121631282|gb|EAX63655.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124119144|gb|EAY37887.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|124122337|gb|EAY41080.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|125618863|gb|EAZ47396.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|126512521|gb|EAZ75115.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126520578|gb|EAZ77801.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146315815|gb|ABQ20354.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|150420017|gb|EDN12323.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 152
Score = 103 bits (256), Expect = 4e-21, Method: Composition-based stats.
Identities = 57/134 (42%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Query: 6 TLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIAL 65
+LK GQ+Y+ WP+ +L +FPE RVIK T FA K MP +A S++ Q +A + A+
Sbjct: 12 SLKDGQKYMDIWPMRKELNPLFPEQRVIKATRFAIKVMPAVAAISVLTQMVFANTQ--AM 69
Query: 66 AVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTY 125
A++ ALF + LP+QGI+WLG RA T LPP A ++ +Y + E AL KP Y
Sbjct: 70 PQAIVVALFAMSLPLQGIWWLGHRANTQLPPALASWYRELYMKIVETGFALEPIKSKPRY 129
Query: 126 FDLAVLLRQAQQKL 139
+LA +L +A ++L
Sbjct: 130 KELAQVLNRAFRQL 143
>gi|116189075|ref|ZP_01478834.1| hypothetical protein VchoM_02001993 [Vibrio cholerae MO10]
gi|116217576|ref|ZP_01483372.1| hypothetical protein VchoR_02000670 [Vibrio cholerae RC385]
gi|31563443|sp|Q9KT06|Y1099_VIBCH UPF0208 membrane protein VC_1099
Length = 150
Score = 102 bits (254), Expect = 6e-21, Method: Composition-based stats.
Identities = 57/134 (42%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Query: 6 TLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIAL 65
+LK GQ+Y+ WP+ +L +FPE RVIK T FA K MP +A S++ Q +A + A+
Sbjct: 10 SLKDGQKYMDIWPMRKELNPLFPEQRVIKATRFAIKVMPAVAAISVLTQMVFANTQ--AM 67
Query: 66 AVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTY 125
A++ ALF + LP+QGI+WLG RA T LPP A ++ +Y + E AL KP Y
Sbjct: 68 PQAIVVALFAMSLPLQGIWWLGHRANTQLPPALASWYRELYMKIVETGFALEPIKSKPRY 127
Query: 126 FDLAVLLRQAQQKL 139
+LA +L +A ++L
Sbjct: 128 KELAQVLNRAFRQL 141
>gi|77976295|ref|ZP_00831796.1| COG3092: Uncharacterized protein conserved in bacteria [Yersinia
intermedia ATCC 29909]
Length = 130
Score = 102 bits (254), Expect = 7e-21, Method: Composition-based stats.
Identities = 59/134 (44%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 14 LKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIALAVAVLTAL 73
+KTWP + +L +FPENRV+ T F +FMP LA+F++ WQ + G L A+ TAL
Sbjct: 1 MKTWPADKRLATVFPENRVVTATRFGIRFMPPLAIFTLTWQI----ALGGQLGPAIATAL 56
Query: 74 FTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTYFDLAVLLR 133
F LP+QG++WLGKRA TPLPP F V L E A+ + PTY LA +L+
Sbjct: 57 FACGLPLQGLWWLGKRAITPLPPTLLKWFHEVRNKLTEAGQAVAPVEQTPTYQSLADVLK 116
Query: 134 QAQQKLGRDFWQDL 147
+A ++L + F DL
Sbjct: 117 RAFKQLDKTFLDDL 130
>gi|116185170|ref|ZP_01475086.1| hypothetical protein VEx2w_02002325 [Vibrio sp. Ex25]
Length = 150
Score = 102 bits (253), Expect = 8e-21, Method: Composition-based stats.
Identities = 54/136 (39%), Positives = 84/136 (61%), Gaps = 2/136 (1%)
Query: 6 TLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIAL 65
+LK GQ Y++ WP+ +L AIFPE R+IK T F K MP +A S++ Q + AL
Sbjct: 10 SLKDGQNYMEIWPVRKELSAIFPEQRIIKATRFGIKVMPAVAAISVLTQMAFNNYH--AL 67
Query: 66 AVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTY 125
+++ ALF + LP+QGI+WLG RA T LPP A ++ +++ + E AL +P Y
Sbjct: 68 PQSIVVALFAISLPLQGIWWLGARANTKLPPSLASWYRELHQKIVETGFALEPVKARPRY 127
Query: 126 FDLAVLLRQAQQKLGR 141
+LA++L +A ++L +
Sbjct: 128 KELAIILNRAFRQLDK 143
>gi|62287986|sp|Q6LNF7|Y2797_PHOPR UPF0208 membrane protein PBPRA2797
Length = 149
Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/140 (39%), Positives = 89/140 (63%), Gaps = 2/140 (1%)
Query: 2 SFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSD 61
+ + ++GQQY+ TWP+ +L AIFPE R IK T FA + MP +AV S++ Q +
Sbjct: 5 TVWQDFQNGQQYMATWPMRKELAAIFPEQRYIKATKFATRVMPAVAVMSVLSQMAFNNYG 64
Query: 62 GIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPE 121
AL A+ ALF L +P+QG++WLGKR++T LPP A+ ++ +YE + + A+ +
Sbjct: 65 --ALPQAMTVALFALTMPLQGLWWLGKRSRTTLPPSLAIWYREIYEKITSEGHAMQPLKK 122
Query: 122 KPTYFDLAVLLRQAQQKLGR 141
+P Y +LA +L +A ++L +
Sbjct: 123 QPRYLELAEVLNRAFKQLDK 142
>gi|90412831|ref|ZP_01220831.1| hypothetical protein P3TCK_26170 [Photobacterium profundum 3TCK]
gi|90326190|gb|EAS42617.1| hypothetical protein P3TCK_26170 [Photobacterium profundum 3TCK]
Length = 149
Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/135 (40%), Positives = 87/135 (64%), Gaps = 2/135 (1%)
Query: 7 LKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIALA 66
++GQQY+ TWP+ +L AIFPE R IK T FA + MP +AV S++ Q + AL
Sbjct: 10 FQNGQQYMATWPMRKELAAIFPEQRYIKATKFATRVMPAVAVMSVLSQMAFNNYG--ALP 67
Query: 67 VAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTYF 126
A+ ALF L +P+QG++WLGKR++T LPP A+ ++ +YE + + A+ ++P Y
Sbjct: 68 QAMTVALFALTMPLQGLWWLGKRSRTTLPPSLAIWYREIYEKITSEGHAMQPLKKQPRYL 127
Query: 127 DLAVLLRQAQQKLGR 141
+LA +L +A ++L +
Sbjct: 128 ELAEVLNRAFKQLDK 142
>gi|156975214|ref|YP_001446121.1| hypothetical protein VIBHAR_02941 [Vibrio harveyi ATCC BAA-1116]
gi|156526808|gb|ABU71894.1| hypothetical protein VIBHAR_02941 [Vibrio harveyi ATCC BAA-1116]
Length = 150
Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
Query: 6 TLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIAL 65
+LK GQ Y++ WP+ +L AIFPE R+IK T F K MP +A S++ Q + D +L
Sbjct: 10 SLKDGQSYMEIWPVRKELNAIFPEQRIIKATRFGIKVMPAVAAISVLTQMAFNNYD--SL 67
Query: 66 AVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTY 125
A++ ALF + +P+QG++WLG R+ T LPP A ++ +++ + E AL +P Y
Sbjct: 68 PQAIVVALFAISMPLQGMWWLGSRSNTKLPPALASWYRELHQKITETGFALEPVKARPRY 127
Query: 126 FDLAVLLRQAQQKLGR 141
+LAV+L +A ++L +
Sbjct: 128 KELAVILNRAFRQLDK 143
>gi|153213544|ref|ZP_01948834.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124115880|gb|EAY34700.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 152
Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/134 (41%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Query: 6 TLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIAL 65
+LK GQ+Y+ WP+ +L +FPE RVIK T FA K MP +A S++ Q + + A+
Sbjct: 12 SLKDGQKYMDIWPMRKELNPLFPEQRVIKATRFAIKVMPAVAAISVLTQMVFTNTQ--AM 69
Query: 66 AVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTY 125
A++ ALF + LP+QGI+WLG RA T LPP A ++ +Y + E AL KP Y
Sbjct: 70 PQAIVVALFAMSLPLQGIWWLGHRANTQLPPALASWYRELYMKIVETGFALEPIKSKPRY 129
Query: 126 FDLAVLLRQAQQKL 139
+LA +L +A ++L
Sbjct: 130 KELAQVLNRAFRQL 143
>gi|153824928|ref|ZP_01977595.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|153828159|ref|ZP_01980826.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|125621965|gb|EAZ50289.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|148876401|gb|EDL74536.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|149741440|gb|EDM55470.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150422587|gb|EDN14543.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 152
Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/134 (41%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Query: 6 TLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIAL 65
+LK GQ+Y+ WP+ +L +FPE RVIK T FA K MP +A S++ Q + + A+
Sbjct: 12 SLKDGQKYMDIWPMRKELNPLFPEQRVIKATRFAIKVMPAVAAISVLTQMVFTNTQ--AM 69
Query: 66 AVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTY 125
A++ ALF + LP+QGI+WLG RA T LPP A ++ +Y + E AL KP Y
Sbjct: 70 PQAIVVALFAMSLPLQGIWWLGHRANTQLPPALASWYRELYMKIVETGFALEPIKSKPRY 129
Query: 126 FDLAVLLRQAQQKL 139
+LA +L +A ++L
Sbjct: 130 KELAQVLNRAFRQL 143
>gi|86147941|ref|ZP_01066245.1| hypothetical protein MED222_02255 [Vibrio sp. MED222]
gi|85834266|gb|EAQ52420.1| hypothetical protein MED222_02255 [Vibrio sp. MED222]
Length = 150
Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/137 (38%), Positives = 84/137 (61%), Gaps = 2/137 (1%)
Query: 5 STLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIA 64
S+LK GQ+Y+ WP+ +L +IFPE R+IK T F K MP +A S++ Q + A
Sbjct: 9 SSLKDGQKYMDLWPVRKELNSIFPEQRIIKATRFGVKVMPAIAAISVLTQMVFNNYQ--A 66
Query: 65 LAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPT 124
+ AV+ ALF + LP+QG++WLG R+ T LPP ++ ++E + E AL +P
Sbjct: 67 MPQAVVMALFAISLPLQGMWWLGNRSNTQLPPALVSWYRELHEKITETGFALEPMKSRPR 126
Query: 125 YFDLAVLLRQAQQKLGR 141
Y +LA++L +A ++L +
Sbjct: 127 YKELAIILNRAFRQLDK 143
>gi|116221220|ref|ZP_01486632.1| hypothetical protein VchoV5_02000763 [Vibrio cholerae V51]
Length = 150
Score = 101 bits (251), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/134 (41%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Query: 6 TLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIAL 65
+LK GQ+Y+ WP+ +L +FPE RVIK T FA K MP +A S++ Q + + A+
Sbjct: 10 SLKDGQKYMDIWPMRKELNPLFPEQRVIKATRFAIKVMPAVAAISVLTQMVFTNTQ--AM 67
Query: 66 AVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTY 125
A++ ALF + LP+QGI+WLG RA T LPP A ++ +Y + E AL KP Y
Sbjct: 68 PQAIVVALFAMSLPLQGIWWLGHRANTQLPPALASWYRELYMKIVETGFALEPIKSKPRY 127
Query: 126 FDLAVLLRQAQQKL 139
+LA +L +A ++L
Sbjct: 128 KELAQVLNRAFRQL 141
>gi|91227364|ref|ZP_01261753.1| hypothetical protein V12G01_23675 [Vibrio alginolyticus 12G01]
gi|91188628|gb|EAS74918.1| hypothetical protein V12G01_23675 [Vibrio alginolyticus 12G01]
Length = 150
Score = 101 bits (251), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 84/136 (61%), Gaps = 2/136 (1%)
Query: 6 TLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIAL 65
+LK GQ Y++ WP+ +L AIFPE R+IK T F K MP +A S++ Q + AL
Sbjct: 10 SLKDGQNYMEIWPVRKELSAIFPEQRIIKATRFGIKVMPAVAAISVLTQMAFNNYH--AL 67
Query: 66 AVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTY 125
+++ ALF + LP+QGI+WLG R+ T LPP A ++ +++ + E AL +P Y
Sbjct: 68 PQSIVVALFAISLPLQGIWWLGARSNTKLPPSLASWYRELHQKIVETGFALEPVKARPRY 127
Query: 126 FDLAVLLRQAQQKLGR 141
+LA++L +A ++L +
Sbjct: 128 KELAIILNRAFRQLDK 143
>gi|32034954|ref|ZP_00135038.1| COG3092: Uncharacterized protein conserved in bacteria
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208448|ref|YP_001053673.1| hypothetical protein APL_0974 [Actinobacillus pleuropneumoniae L20]
gi|126097240|gb|ABN74068.1| hypothetical protein APL_0974 [Actinobacillus pleuropneumoniae L20]
Length = 144
Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats.
Identities = 63/146 (43%), Positives = 92/146 (63%), Gaps = 7/146 (4%)
Query: 5 STLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIA 64
+TL++GQ+YL T+P + KLG P+ R+I+ A +FMP A F+I+WQ F+A
Sbjct: 3 ATLQAGQRYLATYPNQKKLGLFMPDYRLIRLVKLASRFMPAFACFAILWQYFFADPSQSI 62
Query: 65 LAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEK-- 122
LA A++T+LF L LP QG+YWLGKRA +PL P S +G+ Y+ LK+K + E
Sbjct: 63 LANAIITSLFALSLPYQGLYWLGKRAASPL-PLSLLGW---YQELKQKLINENKKVEDQA 118
Query: 123 -PTYFDLAVLLRQAQQKLGRDFWQDL 147
P+Y D A LL+ A+Q G +++ L
Sbjct: 119 MPSYQDFANLLQLAEQTWGNEYFDKL 144
>gi|148977638|ref|ZP_01814214.1| hypothetical protein VSWAT3_15953 [Vibrionales bacterium SWAT-3]
gi|145963153|gb|EDK28421.1| hypothetical protein VSWAT3_15953 [Vibrionales bacterium SWAT-3]
Length = 150
Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
Query: 6 TLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIAL 65
+LK GQ+Y+ WP+ +L AIFPE R+IK T F K MP +A S++ Q + A+
Sbjct: 10 SLKDGQKYMDLWPVRKELNAIFPEQRIIKATRFGVKVMPAIAAISVLTQMVFNNYQ--AM 67
Query: 66 AVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTY 125
AV+ ALF + LP+QG++WLG R+ T LPP ++ ++E + E AL +P Y
Sbjct: 68 PQAVVMALFAISLPLQGMWWLGNRSNTQLPPALVSWYRELHEKITETGFALEPMKARPRY 127
Query: 126 FDLAVLLRQAQQKLGR 141
+LA++L +A ++L +
Sbjct: 128 KELAIILNRAFRQLDK 143
>gi|27365548|ref|NP_761076.1| hypothetical protein VV1_2222 [Vibrio vulnificus CMCP6]
gi|37680316|ref|NP_934925.1| hypothetical protein VV2132 [Vibrio vulnificus YJ016]
gi|31563250|sp|Q8DAH7|Y2222_VIBVU UPF0208 membrane protein VV1_2222
gi|39932475|sp|Q7MJM9|Y2132_VIBVY UPF0208 membrane protein VV2132
gi|27361696|gb|AAO10603.1|AE016804_113 Conserved hypothetical protein [Vibrio vulnificus CMCP6]
gi|37199063|dbj|BAC94896.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 150
Score = 99.8 bits (247), Expect = 4e-20, Method: Composition-based stats.
Identities = 54/136 (39%), Positives = 82/136 (60%), Gaps = 2/136 (1%)
Query: 6 TLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIAL 65
+L+ GQ+Y+ TWP+ +L AIFPE R+IK T F K MP +A S++ Q + AL
Sbjct: 10 SLRDGQKYMDTWPMRKELSAIFPEQRIIKATRFGIKVMPAIAAISVLTQMAFNNYQ--AL 67
Query: 66 AVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTY 125
A++ ALF L LP+QG++WLG R+ T LPP A ++ +++ + E AL +P Y
Sbjct: 68 PQAIVMALFALSLPLQGMWWLGHRSNTQLPPALATWYRELHQKIVESGSALEPLKSRPRY 127
Query: 126 FDLAVLLRQAQQKLGR 141
+LA L +A + L +
Sbjct: 128 KELAHTLNRAFRHLDK 143
>gi|59711445|ref|YP_204221.1| hypothetical protein VF0838 [Vibrio fischeri ES114]
gi|59479546|gb|AAW85333.1| hypothetical protein VF0838 [Vibrio fischeri ES114]
Length = 149
Score = 97.8 bits (242), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 3 FFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDG 62
F + GQ Y+ TWP +L +FPE RVIK T FA K MP +AV S++ Q + + G
Sbjct: 6 FLFRFRDGQTYMDTWPERKELAPMFPEQRVIKATKFAVKVMPAVAVISVLTQMVFNNTAG 65
Query: 63 IALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEK 122
L A++ ALF + +P+QG +WLG RA T LPP A ++ +Y+ + E AL +
Sbjct: 66 --LPQAIIIALFAISMPLQGFWWLGNRANTKLPPALASWYRELYQKIIESGAALEPMKSQ 123
Query: 123 PTYFDLAVLLRQAQQKLGR 141
P Y +LA +L +A ++L +
Sbjct: 124 PRYKELANILNKAFKQLDK 142
>gi|33152733|ref|NP_874086.1| hypothetical protein HD1715 [Haemophilus ducreyi 35000HP]
gi|47606264|sp|Q7VKY8|Y1715_HAEDU UPF0208 membrane protein HD_1715
gi|33148957|gb|AAP96475.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 148
Score = 97.1 bits (240), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/143 (38%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
Query: 5 STLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIA 64
+T++ GQ+YL+T+P + KL P+ R+I+ A +FMP A F+I+WQ F+
Sbjct: 7 NTIQLGQRYLETYPNQKKLALFMPDYRLIRLVKQAARFMPIFACFAILWQYFFTDPTQSI 66
Query: 65 LAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPT 124
LA A++T+LF + LP QG+YWLGKRA TPLP +Q + + L +Q + P+
Sbjct: 67 LANAIITSLFAISLPYQGLYWLGKRANTPLPLSLLDWYQSLKQKLISEQKIMQD-QAVPS 125
Query: 125 YFDLAVLLRQAQQKLGRDFWQDL 147
Y D A LL+ A++ G +++ +L
Sbjct: 126 YQDFANLLKLAEETWGDNYFNEL 148
>gi|149188153|ref|ZP_01866448.1| hypothetical protein VSAK1_03384 [Vibrio shilonii AK1]
gi|148838141|gb|EDL55083.1| hypothetical protein VSAK1_03384 [Vibrio shilonii AK1]
Length = 150
Score = 95.9 bits (237), Expect = 7e-19, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 87/141 (61%), Gaps = 2/141 (1%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+S ++K+GQ+Y++ WP+ +L +FPE R+IK T F K MP +A S++ Q A S
Sbjct: 5 VSLTQSIKNGQKYMELWPMRKELTPLFPEQRIIKATKFGIKVMPAVAAISVLTQM--AFS 62
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
+ A+ +++ ALF + LP+QG++WLG R T LPP A ++ +++ + E A+
Sbjct: 63 NAQAMPQSIVIALFAISLPVQGMWWLGNRYNTQLPPALASWYRELHQKIIETGCAMEPVK 122
Query: 121 EKPTYFDLAVLLRQAQQKLGR 141
KP Y +LAV L +A ++L R
Sbjct: 123 AKPKYKELAVTLNRAFRQLDR 143
>gi|90579348|ref|ZP_01235158.1| hypothetical protein VAS14_06563 [Vibrio angustum S14]
gi|90440181|gb|EAS65362.1| hypothetical protein VAS14_06563 [Vibrio angustum S14]
Length = 184
Score = 95.5 bits (236), Expect = 8e-19, Method: Composition-based stats.
Identities = 53/135 (39%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Query: 7 LKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIALA 66
+ GQ Y+ TWP+ +L A+FPE+R IK T FA K MP +A SI+ Q + G+ A
Sbjct: 45 FQDGQHYMSTWPMRKELAAVFPEHRYIKATKFATKVMPAVAAISILTQMVFNNYAGMPQA 104
Query: 67 VAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTYF 126
VA+ AL L +P+QG++WLGKR++T LPP A + +++ + + A+ +P Y
Sbjct: 105 VAI--ALLALSMPLQGLWWLGKRSQTVLPPSLAKWYSEIHQKIVSEGYAMQPKKSQPRYQ 162
Query: 127 DLAVLLRQAQQKLGR 141
+LA +L +A ++L R
Sbjct: 163 ELADVLSRAFKQLDR 177
>gi|89072719|ref|ZP_01159284.1| hypothetical protein SKA34_19354 [Photobacterium sp. SKA34]
gi|89051539|gb|EAR56993.1| hypothetical protein SKA34_19354 [Photobacterium sp. SKA34]
Length = 184
Score = 92.8 bits (229), Expect = 6e-18, Method: Composition-based stats.
Identities = 51/135 (37%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
Query: 7 LKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIALA 66
+ GQ Y+ TWP+ +L A+FPE+R IK T FA K MP +A SI+ Q + + A
Sbjct: 45 FQDGQHYMSTWPMRKELAAVFPEHRYIKATKFATKVMPAVAAISILTQMVFNNYAAMPQA 104
Query: 67 VAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTYF 126
VA+ AL + +P+QG++WLGKR++T LPP A + +++ + + A+ +P Y
Sbjct: 105 VAI--ALLAISMPLQGLWWLGKRSQTVLPPSLAKWYSEIHQKIVSEGYAMQPKKSQPRYQ 162
Query: 127 DLAVLLRQAQQKLGR 141
+LA +L +A ++L R
Sbjct: 163 ELADVLSRAFKQLDR 177
>gi|88860003|ref|ZP_01134642.1| hypothetical protein PTD2_18365 [Pseudoalteromonas tunicata D2]
gi|88817997|gb|EAR27813.1| hypothetical protein PTD2_18365 [Pseudoalteromonas tunicata D2]
Length = 148
Score = 92.4 bits (228), Expect = 6e-18, Method: Composition-based stats.
Identities = 58/146 (39%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
Query: 2 SFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSD 61
S + L GQQY K WP +L IFPE RVIK T A K MP LAV SI Q + +
Sbjct: 4 SIVAQLSDGQQYSKIWPDNVELAPIFPERRVIKATQMALKVMPMLAVLSIFVQVQFMGTQ 63
Query: 62 GIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPE 121
L A+ ALF L +P+QG+YWLGKRA T LPP A ++++ ++E +
Sbjct: 64 --YLPQALTFALFLLSMPVQGLYWLGKRANTTLPPSLASWYRQLQSKMQENGYQPSVSRA 121
Query: 122 KPTYFDLAVLLRQAQQKLGRDFWQDL 147
+P +++LA LL+ +K+ + F +++
Sbjct: 122 QPRFYELAHLLKDMFEKMDKAFTKEI 147
>gi|153091288|gb|EDN73262.1| hypothetical protein MHA_0278 [Mannheimia haemolytica PHL213]
Length = 145
Score = 91.7 bits (226), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/144 (34%), Positives = 81/144 (56%)
Query: 4 FSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGI 63
S +GQ+YL T P + KL P+ +I+ F+ K MP A F++VWQ +
Sbjct: 2 LSLFDAGQRYLNTLPNQKKLANFMPDYHIIRLVKFSSKVMPAFACFALVWQYCFTDPTQS 61
Query: 64 ALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKP 123
LA +VLTA+F + +P QG+YWLGKRA++PL ++ + + L Q+ L P
Sbjct: 62 ILANSVLTAVFAISIPFQGLYWLGKRARSPLSLSLLEWYESLRQKLISAQVKLEETQAVP 121
Query: 124 TYFDLAVLLRQAQQKLGRDFWQDL 147
++ D A LL+ A++ G +++ +L
Sbjct: 122 SFQDFANLLKLAEETWGDEYFDEL 145
>gi|149909999|ref|ZP_01898648.1| hypothetical protein PE36_18504 [Moritella sp. PE36]
gi|149807013|gb|EDM66972.1| hypothetical protein PE36_18504 [Moritella sp. PE36]
Length = 147
Score = 89.4 bits (220), Expect = 7e-17, Method: Composition-based stats.
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 3 FFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDG 62
F +TL GQ Y++ WP++ +L A FPENRVI T K MP LA+ +++ Q Y
Sbjct: 6 FKNTLYKGQHYMQRWPMKKELAARFPENRVIAATKLGFKTMPPLAILTVMMQYLYGDMQQ 65
Query: 63 IALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEK 122
+ ++A+ AL + LPMQG++WLGKR+ LP A + +Y+ L + L +
Sbjct: 66 LPASIAI--ALLFITLPMQGLFWLGKRSGELLPVSLASWYHELYQGLVTQGCELEPAKKN 123
Query: 123 PTYFDLAVLLRQAQQKLGRDF 143
P Y +LA +L A +++ + F
Sbjct: 124 PHYSELADILGSAFKRMDKAF 144
>gi|109898684|ref|YP_661939.1| protein of unknown function DUF412 [Pseudoalteromonas atlantica
T6c]
gi|109700965|gb|ABG40885.1| protein of unknown function DUF412 [Pseudoalteromonas atlantica
T6c]
Length = 148
Score = 88.6 bits (218), Expect = 9e-17, Method: Composition-based stats.
Identities = 53/144 (36%), Positives = 84/144 (58%), Gaps = 2/144 (1%)
Query: 2 SFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSD 61
+ F+ K GQQY++TWP++ +L +FPE RVI T FA K MP LAV ++ Y+ +
Sbjct: 4 TVFTLFKDGQQYMQTWPIKKELYPLFPECRVISATKFAIKTMPPLAVLTVA--SAYSITG 61
Query: 62 GIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPE 121
L AV +F L +P+QG+ WLG RA LPP ++ ++ +++ + ++ +
Sbjct: 62 VETLPNAVAMGIFFLSIPVQGLLWLGHRANQWLPPMTSSWYRDIHQKMLQQGCKVGGAKS 121
Query: 122 KPTYFDLAVLLRQAQQKLGRDFWQ 145
+P Y +LAVLL+ A L + F Q
Sbjct: 122 RPKYKELAVLLKTAFDDLDKAFTQ 145
>gi|145300282|ref|YP_001143123.1| hypothetical protein ASA_3400 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853054|gb|ABO91375.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 146
Score = 87.4 bits (215), Expect = 2e-16, Method: Composition-based stats.
Identities = 58/145 (40%), Positives = 85/145 (58%), Gaps = 6/145 (4%)
Query: 1 MSFFST-LKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQ 59
M+ F T L+ G+ Y+ WP P+L ++FPENRVIK T FA K +P LAV S++ Q Q
Sbjct: 3 MNIFGTKLQQGRHYMTLWPRRPELNSMFPENRVIKATEFALKIIPALAVLSVMLQ---FQ 59
Query: 60 SDGIALAVAVLTA-LFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPI 118
+ +V+T+ LF L LP+QG YWLG+RA T LPP A ++ + + E+ +
Sbjct: 60 LGELHYWPSVMTSVLFLLSLPLQGYYWLGQRADTRLPPSLASWYREINGKMNEQGSHRQL 119
Query: 119 CPEKPTYFDLAVLLRQAQQKLGRDF 143
+ P Y +LA L A ++L + F
Sbjct: 120 VAQ-PRYEELADTLNAAFKQLDKSF 143
>gi|117619308|ref|YP_855435.1| hypothetical protein AHA_0892 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560715|gb|ABK37663.1| conserved hypothetical protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 146
Score = 86.7 bits (213), Expect = 3e-16, Method: Composition-based stats.
Identities = 57/145 (39%), Positives = 86/145 (59%), Gaps = 6/145 (4%)
Query: 1 MSFFST-LKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQ 59
M+ F T L+ G+ Y+ WP P+L ++FPENRVIK T FA K +P LAV S++ Q + +
Sbjct: 3 MNIFGTKLQQGRHYMTLWPRRPELNSMFPENRVIKATEFALKVIPALAVLSVMLQFQFGE 62
Query: 60 SDGIALAVAVLTA-LFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPI 118
+ +V+T+ LF L LP+QG YWLG+RA T LPP A ++ + + E+ +
Sbjct: 63 ---LHYWPSVMTSVLFLLSLPLQGYYWLGQRADTRLPPSLASWYREINGKMNEQGGRRQL 119
Query: 119 CPEKPTYFDLAVLLRQAQQKLGRDF 143
+ P Y +LA L A ++L + F
Sbjct: 120 VAQ-PRYEELADTLNAAFKQLDKSF 143
>gi|119774633|ref|YP_927373.1| hypothetical protein Sama_1496 [Shewanella amazonensis SB2B]
gi|119767133|gb|ABL99703.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 147
Score = 86.7 bits (213), Expect = 4e-16, Method: Composition-based stats.
Identities = 55/145 (37%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
Query: 3 FFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDG 62
FSTL+ G +Y+K WP+ LG FPE RV+K T A +FMP A+ + Q +
Sbjct: 5 LFSTLRDGHRYMKAWPMAKPLGYFFPEYRVVKATSLAIRFMPPFALLAAASQIYLHGWAF 64
Query: 63 IALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEK 122
+ A+A+ LF LP+QGI WLG+RA+ PLP +V E L+ +A K
Sbjct: 65 LPQAIAI--GLFFFSLPLQGILWLGQRARHPLPLSLLSFGNQVQERLQAIGVAYIPLGAK 122
Query: 123 PTYFDLAVLLRQAQQKLGRDFWQDL 147
Y D+A LL+ A +L +W +L
Sbjct: 123 ACYLDMANLLKIAFDRLDASYWDEL 147
>gi|119469284|ref|ZP_01612223.1| hypothetical protein ATW7_07524 [Alteromonadales bacterium TW-7]
gi|119447148|gb|EAW28417.1| hypothetical protein ATW7_07524 [Alteromonadales bacterium TW-7]
Length = 148
Score = 85.9 bits (211), Expect = 7e-16, Method: Composition-based stats.
Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 2 SFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSD 61
S S ++ G+QY K WP+ +L +F E RVI+ T A MP LA+ ++ +Q Y D
Sbjct: 4 SVMSQVQIGRQYAKQWPMRKELAPLFSEFRVIRATELAITVMPILAMLTLFFQLNYLGPD 63
Query: 62 GIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPE 121
+ A+A +ALF L LP+QG+ WLGKRA+TPL P ++ ++ + + +
Sbjct: 64 FLPQAIA--SALFFLSLPLQGLLWLGKRAQTPLDPAMLSWYKELHTKMVANGYQAKLSEK 121
Query: 122 KPTYFDLAVLLRQAQQKLGRDFWQD 146
KP Y +LA LL+ +K+ + F ++
Sbjct: 122 KPRYLELATLLKDMFEKMDKAFTKE 146
>gi|124548773|ref|ZP_01707298.1| protein of unknown function DUF412 [Shewanella putrefaciens 200]
gi|146293476|ref|YP_001183900.1| protein of unknown function DUF412 [Shewanella putrefaciens CN-32]
gi|124508238|gb|EAY52338.1| protein of unknown function DUF412 [Shewanella putrefaciens 200]
gi|145565166|gb|ABP76101.1| protein of unknown function DUF412 [Shewanella putrefaciens CN-32]
Length = 160
Score = 85.9 bits (211), Expect = 7e-16, Method: Composition-based stats.
Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++ TL G++Y+KTWP+ +LG FPE RV++ T A MP LAVF+ + Q +
Sbjct: 16 INILKTLGDGRRYMKTWPMVRQLGLFFPEYRVVRATQLAILVMPVLAVFASMSQLYIY-- 73
Query: 61 DGIA-LAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPIC 119
G A L AV ALF + LP+QG+ WLG RA+ PLP ++ L +
Sbjct: 74 -GWAFLPQAVTIALFFISLPVQGLLWLGWRARHPLPLSLFDWSNQLSAKLSSMGIQCQTL 132
Query: 120 PEKPTYFDLAVLLRQAQQKLGRDFWQDL 147
K Y D+AV+L+ A ++L +W++L
Sbjct: 133 GAKACYLDMAVILKIAFERLDASYWEEL 160
>gi|120598446|ref|YP_963020.1| protein of unknown function DUF412 [Shewanella sp. W3-18-1]
gi|120558539|gb|ABM24466.1| protein of unknown function DUF412 [Shewanella sp. W3-18-1]
Length = 165
Score = 85.9 bits (211), Expect = 7e-16, Method: Composition-based stats.
Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++ TL G++Y+KTWP+ +LG FPE RV++ T A MP LAVF+ + Q +
Sbjct: 21 INILKTLGDGRRYMKTWPMVRQLGLFFPEYRVVRATQLAILVMPVLAVFASMSQLYIY-- 78
Query: 61 DGIA-LAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPIC 119
G A L AV ALF + LP+QG+ WLG RA+ PLP ++ L +
Sbjct: 79 -GWAFLPQAVTIALFFISLPVQGLLWLGWRARHPLPLSLFDWSNQLSAKLSSMGIQCQTL 137
Query: 120 PEKPTYFDLAVLLRQAQQKLGRDFWQDL 147
K Y D+AV+L+ A ++L +W++L
Sbjct: 138 GAKACYLDMAVILKIAFERLDASYWEEL 165
>gi|114772817|ref|ZP_01450141.1| hypothetical protein OM2255_21638 [alpha proteobacterium HTCC2255]
Length = 148
Score = 84.0 bits (206), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+S + +K G Y+KTWPL+ +L ++FPE RVI T FA K +P L +F+I+
Sbjct: 3 LSIATMVKDGHTYMKTWPLKRELYSLFPECRVITATKFAMKVLPALGIFTIILLVNNHSM 62
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
+ A+A+ F +P+QG WLG RA LPP + + + ++E+ LP
Sbjct: 63 TYLPQALAMGGMFF--IIPLQGQIWLGHRANQALPPSLHAWYVDIRQKMQEQGCTLPQTR 120
Query: 121 EKPTYFDLAVLLRQAQQKLGRDF 143
+ P Y +LA LL+ A L F
Sbjct: 121 KAPRYMELAALLKMAFDDLDNAF 143
>gi|90407164|ref|ZP_01215352.1| hypothetical protein PCNPT3_03036 [Psychromonas sp. CNPT3]
gi|90311740|gb|EAS39837.1| hypothetical protein PCNPT3_03036 [Psychromonas sp. CNPT3]
Length = 149
Score = 83.6 bits (205), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
Query: 3 FFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDG 62
FF LK G YLK WP + L +F +++V T FA + P + SIV+ F +
Sbjct: 4 FFEILKQGLGYLKIWPQQKVLNCLFIDSKVTFYTRFAMQITPVFILISIVFSSFLPIT-- 61
Query: 63 IALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEK 122
+ V LF L +P+QG+YWLGKR++T LP + + + + +AL + + ++
Sbjct: 62 MHPETTVTFILFLLSMPLQGLYWLGKRSQTFLPSQLLMWYAEIDKALNSQHKKDRVMTQR 121
Query: 123 PTYFDLAVLLRQAQQKLGRDFWQD 146
P Y DLA+LL+ A ++ G +F Q+
Sbjct: 122 PRYTDLALLLKNAFEQGGDNFLQN 145
>gi|91793760|ref|YP_563411.1| protein of unknown function DUF412 [Shewanella denitrificans OS217]
gi|91715762|gb|ABE55688.1| protein of unknown function DUF412 [Shewanella denitrificans OS217]
Length = 147
Score = 82.8 bits (203), Expect = 6e-15, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+S L G++Y+KTWPL +LG FPE RV+K T A +P LAV Q +
Sbjct: 3 LSSLKLLGDGRRYMKTWPLVKQLGFYFPEYRVVKATQLALNILPLLAVLIACSQVYLLGW 62
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
D + A+A+L LF + LP+QG+ WLG RA+ PLP ++ + L +A
Sbjct: 63 DFLPQAIAML--LFIISLPIQGLLWLGWRARHPLPLSLFDWGNQLSDKLIAMGIACKPLG 120
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
K Y D+A +L+ A ++L +W+ L
Sbjct: 121 AKACYLDMAQILKLAFERLDSHYWEQL 147
>gi|88796618|ref|ZP_01112279.1| hypothetical protein MADE_19792 [Alteromonas macleodii 'Deep
ecotype']
gi|88772040|gb|EAR03344.1| hypothetical protein MADE_19792 [Alteromonas macleodii 'Deep
ecotype']
Length = 142
Score = 82.4 bits (202), Expect = 7e-15, Method: Composition-based stats.
Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Query: 7 LKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIALA 66
LK+GQQY+KTWP+ +L A FPE RV+ T FA K MP +A+ S +D +
Sbjct: 2 LKNGQQYMKTWPVRKELYAFFPECRVVAATKFAIKTMPPVAMVSCALLFQNLGADYLPQT 61
Query: 67 VAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKPTYF 126
+A+ F L LPMQG+ WLG R+ LPP+ +Q ++ ++ + + + KP Y
Sbjct: 62 IAI--GAFFLSLPMQGLLWLGHRSDQYLPPQLKSWYQEIHAKMRAQGVNIASAKAKPKYK 119
Query: 127 DLAVLLRQAQQKLGRDF 143
+LA LL+ A L F
Sbjct: 120 ELAQLLKTAFDDLDSVF 136
>gi|113951043|ref|ZP_01436642.1| protein of unknown function DUF412 [Shewanella baltica OS195]
gi|153001209|ref|YP_001366890.1| protein of unknown function DUF412 [Shewanella baltica OS185]
gi|113906541|gb|EAU25294.1| protein of unknown function DUF412 [Shewanella baltica OS195]
gi|151365827|gb|ABS08827.1| protein of unknown function DUF412 [Shewanella baltica OS185]
Length = 160
Score = 82.0 bits (201), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+ TL G QY+KTWP+ +LG FPE RV++ T A MP LA F + Q Y
Sbjct: 16 IKILKTLGDGHQYMKTWPMVRQLGFYFPEYRVVRATQLAILVMPVLAFF-VSMSQLYIHG 74
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
L AV LF + LP+QG+ WLG RA+ PLP ++ L +
Sbjct: 75 WAF-LPQAVTLGLFFISLPLQGLLWLGWRARHPLPLTLFDWSNQLSAKLSSMGINCHTLG 133
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
K Y D+A++L+ A ++L +W++L
Sbjct: 134 AKACYLDMALILKIAFERLDASYWEEL 160
>gi|114047064|ref|YP_737614.1| protein of unknown function DUF412 [Shewanella sp. MR-7]
gi|117920001|ref|YP_869193.1| protein of unknown function DUF412 [Shewanella sp. ANA-3]
gi|113888506|gb|ABI42557.1| protein of unknown function DUF412 [Shewanella sp. MR-7]
gi|117612333|gb|ABK47787.1| protein of unknown function DUF412 [Shewanella sp. ANA-3]
Length = 165
Score = 82.0 bits (201), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++ TL G++Y+KTWP+ +LG FPE RV++ T A MP LA+ + V Q + +
Sbjct: 21 INILKTLGDGRRYMKTWPMVRQLGLYFPEYRVVRATQLAILVMPVLAILASVSQIY---T 77
Query: 61 DGIALAVAVLT-ALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPIC 119
G A LT ALF + LP+QG+ WLG RA+ PLP ++ L +
Sbjct: 78 YGWAFLPQALTIALFFISLPLQGLLWLGWRARHPLPLSLFDWSNQLSAKLSAMGIHCQSL 137
Query: 120 PEKPTYFDLAVLLRQAQQKLGRDFWQDL 147
K Y D+A++L+ A ++L +W++L
Sbjct: 138 GAKACYLDMALILKIAFERLDASYWEEL 165
>gi|24374441|ref|NP_718484.1| hypothetical protein SO_2914 [Shewanella oneidensis MR-1]
gi|24349017|gb|AAN55928.1|AE015730_5 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 179
Score = 82.0 bits (201), Expect = 1e-14, Method: Composition-based stats.
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++ TL G++Y+KTWP+ +LG FPE RV++ T A MP LAV + V Q + +
Sbjct: 35 INILKTLGDGRRYMKTWPMVRQLGLYFPEYRVVRATQLAILVMPVLAVLASVSQLY---T 91
Query: 61 DGIALAVAVLT-ALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPIC 119
G A LT ALF + LP+QG+ WLG RA+ PLP ++ L +
Sbjct: 92 YGWAFLPQALTIALFFISLPLQGLLWLGWRARHPLPLSLFDWSNQLSAKLTAMGIHCQSL 151
Query: 120 PEKPTYFDLAVLLRQAQQKLGRDFWQDL 147
K Y D+A++L+ A ++L +W++L
Sbjct: 152 GAKACYLDMALILKIAFERLDASYWEEL 179
>gi|113969834|ref|YP_733627.1| protein of unknown function DUF412 [Shewanella sp. MR-4]
gi|113884518|gb|ABI38570.1| protein of unknown function DUF412 [Shewanella sp. MR-4]
Length = 165
Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++ TL G++Y+KTWP+ +LG FPE RV++ T A MP LA+ + V Q + +
Sbjct: 21 INILKTLGDGRRYMKTWPMVRQLGLYFPEYRVVRATQLAILVMPVLAILASVSQIY---T 77
Query: 61 DGIALAVAVLT-ALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPIC 119
G A LT ALF + LP+QG+ WLG RA+ PLP ++ L +
Sbjct: 78 YGWAFLPQALTIALFFISLPLQGLLWLGWRARHPLPLSLFDWSNQLSAKLSAMGIHCQSL 137
Query: 120 PEKPTYFDLAVLLRQAQQKLGRDFWQDL 147
K Y D+A++L+ A ++L +W++L
Sbjct: 138 GAKACYLDMALILKIAFERLDASYWEEL 165
>gi|126174882|ref|YP_001051031.1| protein of unknown function DUF412 [Shewanella baltica OS155]
gi|149117369|ref|ZP_01844063.1| protein of unknown function DUF412 [Shewanella baltica OS223]
gi|125998087|gb|ABN62162.1| protein of unknown function DUF412 [Shewanella baltica OS155]
gi|146862556|gb|EDK48216.1| protein of unknown function DUF412 [Shewanella baltica OS223]
Length = 160
Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+ TL G QY+KTWP+ +LG FPE RV++ T A MP LA F + Q Y
Sbjct: 16 IKILKTLGDGHQYMKTWPMVRQLGFYFPEYRVVRATQLAILVMPVLAFF-VSMSQLYIHG 74
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
L AV LF + LP+QG+ WLG RA+ PLP ++ L +
Sbjct: 75 WAF-LPQAVTLGLFFISLPLQGLLWLGWRARHPLPLTLFDWSNQLSAKLSSMGINCQTLG 133
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
K Y D+A++L+ A ++L +W++L
Sbjct: 134 AKACYLDMALILKIAFERLDASYWEEL 160
>gi|127513320|ref|YP_001094517.1| protein of unknown function DUF412 [Shewanella loihica PV-4]
gi|126638615|gb|ABO24258.1| protein of unknown function DUF412 [Shewanella loihica PV-4]
Length = 147
Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 4 FSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGI 63
TL G++Y+KTWP+ +L FPE RVI+ T A + MP LA+ + Q + +
Sbjct: 6 LKTLGVGRRYMKTWPMVRQLSFYFPEYRVIRATALAIRLMPLLALLAGGSQLYLYGWAWL 65
Query: 64 ALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPEKP 123
A+ + ALF + LP+QG+ WLG RAK PLP + L+ +A P
Sbjct: 66 PQAITI--ALFFISLPIQGLLWLGWRAKHPLPLSLLDWGNNLSAKLQGMGVACPPLGASA 123
Query: 124 TYFDLAVLLRQAQQKLGRDFWQDL 147
Y D+AV+L+ A ++L + +W+ L
Sbjct: 124 CYLDMAVILKMAFERLDKHYWEAL 147
>gi|47606292|sp|Q8ED56|Y2914_SHEON UPF0208 membrane protein SO_2914
Length = 147
Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++ TL G++Y+KTWP+ +LG FPE RV++ T A MP LAV + V Q + +
Sbjct: 3 INILKTLGDGRRYMKTWPMVRQLGLYFPEYRVVRATQLAILVMPVLAVLASVSQLY---T 59
Query: 61 DGIALAVAVLT-ALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPIC 119
G A LT ALF + LP+QG+ WLG RA+ PLP ++ L +
Sbjct: 60 YGWAFLPQALTIALFFISLPLQGLLWLGWRARHPLPLSLFDWSNQLSAKLTAMGIHCQSL 119
Query: 120 PEKPTYFDLAVLLRQAQQKLGRDFWQDL 147
K Y D+A++L+ A ++L +W++L
Sbjct: 120 GAKACYLDMALILKIAFERLDASYWEEL 147
>gi|77360279|ref|YP_339854.1| hypothetical protein PSHAa1336 [Pseudoalteromonas haloplanktis
TAC125]
gi|76875190|emb|CAI86411.1| conserved protein of unknown function [Pseudoalteromonas
haloplanktis TAC125]
Length = 148
Score = 78.2 bits (191), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 2/145 (1%)
Query: 2 SFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSD 61
S S ++ G+ Y K WP+ +L +F E +VIK T A MP LA+ ++ +Q Y SD
Sbjct: 4 SVMSQVQIGRVYAKKWPMRKELAPLFAEFKVIKATELAITVMPILAMLTLFFQLNYLGSD 63
Query: 62 GIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICPE 121
+ A+A +ALF + LP+QG+ WLGKRA+T L P + +Y + +
Sbjct: 64 FLPQAIA--SALFFISLPLQGLLWLGKRAQTELEPAMQRWYNELYAKMVANGYQAQRSEK 121
Query: 122 KPTYFDLAVLLRQAQQKLGRDFWQD 146
KP Y +L LL K+ + F ++
Sbjct: 122 KPRYLELEELLNDMFDKMDKTFTKE 146
>gi|150381546|ref|ZP_01920543.1| protein of unknown function DUF412 [Shewanella sediminis HAW-EB3]
gi|150253293|gb|EDM91004.1| protein of unknown function DUF412 [Shewanella sediminis HAW-EB3]
Length = 147
Score = 77.8 bits (190), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+ F TL G +Y+KTWP+ +L FPE RVI+ T A MP A+ + Q Y
Sbjct: 3 IKVFKTLGEGHRYMKTWPMVRQLSFYFPEYRVIRATQIAVPLMPLFALLA-ASSQLYIHG 61
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
L A+ ALF + LP+QG+ WLG RA+ PLP ++ L +
Sbjct: 62 WAF-LPQAITIALFFISLPIQGLLWLGWRARHPLPLTLLDWCDQLTTKLTSMGIHCRPLG 120
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
+ Y D+A++L+ A ++L +W++L
Sbjct: 121 PRACYLDMALILKSAFERLDEHYWEEL 147
>gi|114563645|ref|YP_751158.1| protein of unknown function DUF412 [Shewanella frigidimarina NCIMB
400]
gi|114334938|gb|ABI72320.1| protein of unknown function DUF412 [Shewanella frigidimarina NCIMB
400]
Length = 145
Score = 77.4 bits (189), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
M+ L GQ+Y+KTWP+ +LG FPE RV+K T A MP LA+ Q +
Sbjct: 1 MNLVKLLGDGQRYMKTWPMVRQLGFYFPEYRVVKATQLAIIAMPVLALVVASSQLYVFGW 60
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
D + A+ +L LF + LP+QG+ WLG RA PLP ++ AL + +
Sbjct: 61 DYLPQALTML--LFFISLPLQGLLWLGWRASHPLPLSLFDWGNQLTSALTKMGIHCQPLG 118
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
+ Y D+A +L+ A ++L + +W +L
Sbjct: 119 ARACYSDMATILKLAFERLDQSYWDEL 145
>gi|118757551|ref|ZP_01605301.1| protein of unknown function DUF412 [Shewanella pealeana ATCC
700345]
gi|118690907|gb|EAV97173.1| protein of unknown function DUF412 [Shewanella pealeana ATCC
700345]
Length = 147
Score = 74.3 bits (181), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+ TL G++Y+KTWP+ +L FPE RV++ T A MPFLA+ + Q +
Sbjct: 3 IQVLKTLGVGRRYMKTWPMVRQLSYYFPEYRVMRATKLALPLMPFLALLAAASQLYLHGW 62
Query: 61 DGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPICP 120
+ A+ + ALF + LP+QG+ WLG R++ PLP ++ L + +
Sbjct: 63 SYLPQAITI--ALFFISLPIQGLLWLGWRSRHPLPLSLLDWGNQLSTKLMQMGIHCQPLG 120
Query: 121 EKPTYFDLAVLLRQAQQKLGRDFWQDL 147
K YFD+A++L+ A ++L +W++L
Sbjct: 121 AKACYFDMALILKAAFERLDASYWEEL 147
>gi|119946916|ref|YP_944596.1| inner membrane protein DUF412 [Psychromonas ingrahamii 37]
gi|119865520|gb|ABM04997.1| inner membrane protein DUF412 [Psychromonas ingrahamii 37]
Length = 179
Score = 72.8 bits (177), Expect = 6e-12, Method: Composition-based stats.
Identities = 55/152 (36%), Positives = 76/152 (50%), Gaps = 18/152 (11%)
Query: 2 SFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSD 61
SFF ++ G +YLK WP + L +F +++V T + K P F A S
Sbjct: 33 SFFDVIREGSRYLKVWPKQRALNGLFIDSKVSFYTRLSIKITP----------AFIALSL 82
Query: 62 GIALA--------VAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQ 113
G+AL V+V ALF L LP+QG YWLGKR++ LP + F + + L K
Sbjct: 83 GLALTFPISFDPIVSVTFALFLLGLPIQGFYWLGKRSQQLLPQQLLPWFMAIKKKLSAKN 142
Query: 114 MALPICPEKPTYFDLAVLLRQAQQKLGRDFWQ 145
A P+Y +LA LL+QA + G DF Q
Sbjct: 143 AAEKGAIHHPSYLELATLLQQAFKLGGDDFLQ 174
>gi|15832433|ref|NP_311206.1| hypothetical protein ECs3179 [Escherichia coli O157:H7 str.
Sakai]
gi|25391152|pir||C91026 hypothetical protein ECs3179 [imported] - Escherichia coli
(strain O157:H7, substrain RIMD 0509952)
gi|13362649|dbj|BAB36602.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
Length = 107
Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 48/75 (64%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
++FFS + GQ Y KTWPLE +L +F ENRVIK T +A +FMP +AVF++ WQ
Sbjct: 9 VNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTRYAIRFMPPIAVFTLCWQIALGGQ 68
Query: 61 DGIALAVAVLTALFT 75
G A+A A + FT
Sbjct: 69 LGPAVATAPVRLKFT 83
>gi|118073541|ref|ZP_01541721.1| protein of unknown function DUF412 [Shewanella woodyi ATCC 51908]
gi|118022091|gb|EAV35915.1| protein of unknown function DUF412 [Shewanella woodyi ATCC 51908]
Length = 132
Score = 63.9 bits (154), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 12/139 (8%)
Query: 14 LKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQSDGIALAVAVLTAL 73
+KTWP+ +L FPE RVI+ T A MP LA+ + Q + + + A+ + L
Sbjct: 1 MKTWPMVRQLSFYFPEYRVIRATQIALPVMPILALLAAASQLYIHGWEFLPQAITL--GL 58
Query: 74 FTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMAL-----PICPEKPTYFDL 128
F + LP+QG+ WLG R++ PLP + + L K +A+ P+ P K YFD+
Sbjct: 59 FFISLPIQGLLWLGWRSRHPLP----LTLLEWCDKLTTKMIAMGISCRPLGP-KACYFDM 113
Query: 129 AVLLRQAQQKLGRDFWQDL 147
A++L+ A ++L +W++L
Sbjct: 114 ALILKAAFERLDEQYWEEL 132
>gi|56460560|ref|YP_155841.1| hypothetical protein IL1452 [Idiomarina loihiensis L2TR]
gi|56179570|gb|AAV82292.1| Uncharacterized conserved protein [Idiomarina loihiensis L2TR]
Length = 144
Score = 62.4 bits (150), Expect = 8e-09, Method: Composition-based stats.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 8/141 (5%)
Query: 2 SFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVF--SIVWQQFYAQ 59
SFF+ L+ G++Y WP + A+ E+R+I T A + P +AV ++ WQ F Q
Sbjct: 4 SFFAVLRDGKRYADKWPHHSVVAAM-AESRIIPITRKAISWTPGIAVLNAALTWQ-FMPQ 61
Query: 60 SDGIALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSAVGFQRVYEALKEKQMALPIC 119
LA ++ +L L LP+QG+YWLG R++ PL P ++ + + L+++ +
Sbjct: 62 EQ---LAPGLMLSLIMLSLPLQGLYWLGWRSRQPLKPMLRNWYKELRDKLRKQGVECQPQ 118
Query: 120 PEK-PTYFDLAVLLRQAQQKL 139
EK P Y DLA++LR+A + L
Sbjct: 119 GEKGPEYMDLAIILRKALETL 139
>gi|71278395|ref|YP_269871.1| hypothetical protein CPS_3175 [Colwellia psychrerythraea 34H]
gi|71144135|gb|AAZ24608.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 177
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 1 MSFFSTLKSGQQYLKTWPLEPKLGAIFPENRVIKTTLFAQKFMPFLAVFSIVWQQFYAQS 60
+S +K GQ+YL WP +P+L F + R +++ F ++ P LA+F+++ Q + A
Sbjct: 14 ISVVQLIKLGQKYLSLWPDKPELTQYFEDYRGVQSARFVCRYFPALAMFTVIMQLYIASG 73
Query: 61 DGI----------ALAVAVLTALFTLFLPMQGIYWLGKRAKTPLPPKSA----VGFQRVY 106
+ AL A++ LF L LP+Q + + G +A LPP A G ++V
Sbjct: 74 YPLGQGSISNALNALPQALVYGLFLLSLPVQALVFSGVKADKLLPPSLASWYHSGLEKVK 133
Query: 107 EALKEKQM----------ALPICPEKPTYFDLAVLL 132
+ + E+ + KP Y DLA LL
Sbjct: 134 QQVAEQNQRSNGDNNDTAIANLAKYKPRYIDLAQLL 169
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.326 0.139 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 516,306,408
Number of Sequences: 5470121
Number of extensions: 18437046
Number of successful extensions: 57358
Number of sequences better than 1.0e-05: 87
Number of HSP's better than 0.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 57193
Number of HSP's gapped (non-prelim): 87
length of query: 147
length of database: 1,894,087,724
effective HSP length: 111
effective length of query: 36
effective length of database: 1,286,904,293
effective search space: 46328554548
effective search space used: 46328554548
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 124 (52.4 bits)