Reference SNP(refSNP) Cluster Report: rs11102807

Reference SNP(refSNP) Cluster Report: rs11102807

refSNP ID: rs11102807
Organism:	human (Homo sapiens)
Molecule Type:	Genomic
Created/Updated in build:	120/129
Map to Genome Build:	36.3

Allele
Variation Class:	SNP: single nucleotide polymorphism
RefSNP Alleles:	A/G
Ancestral Allele:	G
Clinical Association:	unknown

HGVS Names

Links

, Linkout

SNP Details are organized in the following sections:

Submitter records for this RefSNP Cluster

The submission ss78308775 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs11102807 during BLAST analysis for the current build.

NCBI Assay ID	Handle\|Submitter ID	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Success Rate
ss18144368	SC_SNP\|SC-CHR1_NA17109-200402.chr1.NT_019273.16_6057532	fwd/T	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	02/20/04	10/30/04	120	Genomic	unknown
ss18248987	SC_SNP\|SC-CHR1_NA07340-200402.chr1.NT_019273.16_6057532	fwd/T	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	02/20/04	03/04/04	120	Genomic	unknown
ss20508640	SSAHASNP\|WGSA-200403-chr1.chr1.NT_019273.16_6057532	fwd/T	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	03/18/04	03/18/04	123	Genomic	unknown
ss24266764	PERLEGEN\|afd0682538	fwd/T	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	08/10/04	09/13/04	123	Genomic	unknown
ss41237624	ABI\|hCV31004279	fwd/T	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	07/16/05	07/17/05	126	Genomic	unknown
ss66635054	ILLUMINA\|HumanHap300v1.1_rs11102807	fwd/B	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	11/09/06	11/09/06	127	Genomic	unknown
ss66920698	ILLUMINA\|HumanHap550v1.1_rs11102807	fwd/T	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	11/14/06	11/14/06	127	Genomic	unknown
ss67065472	ILLUMINA\|HumanHap650Yv1.0_rs11102807	fwd/T	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	11/14/06	11/14/06	127	Genomic	unknown
ss68778581	PERLEGEN\|PGP00682538	fwd/T	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	01/30/07	03/31/08	127	Genomic	unknown
ss70389353	ILLUMINA\|HumanHap300v2.0_rs11102807	fwd/T	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	04/18/07	11/18/07	127	Genomic	unknown
ss70518511	ILLUMINA\|HumanHap550v3.0__rs11102807	rev/B	C/T	cttctcacaaatagctctgaaggagacaaa	ggggatctatgaaaacatctaacaaagaaa	04/20/07	03/30/08	130	Genomic	unknown
ss71047121	ILLUMINA\|HumanHap650Yv3.0_rs11102807	fwd/T	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	04/23/07	04/23/07	127	Genomic	unknown
ss74840797	AFFY\|SNP_M-599056	fwd/T	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	08/09/07	08/09/07	128	Genomic	unknown
ss75544121	ILLUMINA\|ILMN_Human_1M_rs11102807	fwd/T	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	08/28/07	08/29/07	129	Genomic	unknown
ss78308775	HGSV\|Cor12878_SNV_20070510.chr1_114773626	fwd/T	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	10/17/07	10/18/07	129	Genomic	unknown
ss85068022	KRIBB_YJKIM\|KHS889736	fwd/T	A/G	tttctttgttagatgttttcatagatcccc	tttgtctccttcagagctatttgtgagaag	12/04/07	12/08/07	130	Genomic	unknown

Fasta sequence (Legend)

 CTTCCTAAAT ATTTGTCCAA ATCTCTCCAT TTGTCTCCAT GTCCACTATC ACCACCCTAT
 GTCAACTTAA CACCCTCAAA ATACCACCCC TTTATCTTTG AGTGCACTGT GACTCCCTGA
 TCCCTCCTCC CCCAACCGCC ATTCCCATGT CTTCCCATTG CTCTTAGGAC GAAGAACAAA
 ATCCTTAAGG CTTTATGACT TTATTATCTT ACCTGGACTG CCTCTTCAAC CACACCATGC
 CCTACTGTCC ACTTGCTTTC TACATTCTGG ATACACTGGC CTTCAGTTTC TTCACTGTGC
 TATGTTCCCT CTTCCCTTGG GCCTTTTGCA CATACTGTCC TCTAGCTGGA ATGATCATTT
 CTCCACCCCT TCCCCCTCCT CATCACCCAC GTTACAGAAT TAATGCCTGC TCAAACTTTG
 AGTCTCAGTT CAAGTAGTAC TCCTTCAGAA AAGCTCCTGT CTAAATCAGT TTTCTTTGTT
 AGATGTTTTC ATAGATCCCC
 R
 TTTGTCTCCT TCAGAGCTAT TTGTGAGAAG CAGTAGAGTT TAGTGGTTAA GAGCAGGAGC
 CAGACTGTCT AAGTTTAAAT TCCAGCTCTG TTACCTACTG GCTTCATGAC CTTGGAAAAC
 GTAAACTCTT TCTGCCTCAG TTTCATCATC TATAAAGTGT ATATAATAGT TACCAACTAT
 ATTCATAGTA TATATAATAA GCTGTTTAAT GATTAAATTA GTACATGGAA AGTATTTAGA
 ACAAGGCCTT ACACATAGAA GCACATAATA TTTTCTTTTA TCATTAATGT CTAGATTTGT
 AATAATGCAT TCATAAGTGT TATTATCTGA TTTATAGTTG TCTCTCTCAC CATGAAAGCA
 GAGATGATAT CTACTTCTAC TGCGAATAAA ATTCACAGTG CTGGGCACAT AGGTGCTTAT
 TAAATATTCA AAAAATTAAT AAATGATTCT TTTTTTTGAG ATGGGGTCTT ACTCTGTTGC
 CAAGGCTGGA GTGTAGTGGT

GeneView

GeneView: no link established by analysis of contig annotation
GeneView: no link established by BLAST analysis of mRNA sequences

Integrated Maps:

NCBI MapViewer: rs11102807 maps exactly once on NCBI human chromosome 1

Chromosome	Contig accession	Contig position	Chromosome position	Hit orientation	Contig Allele	Assembly Type	Group label	Contig label	Neighbor SNP	SNP_flank position
1	NW_001838594.1	6169461	112920155	plus	G	alt_assembly_8	HuRef	HuRef	view	422
1	NW_922462.1	6009025	113290814	plus	A	alt_assembly_1	Celera	Celera	view	422
1	NT_019273.18	10969269	114863107	plus	A	ref_assembly	reference	reference	view	422

NCBI Resource Links

Submitter-Referenced
GenBank
NT_019273

dbSNP Blast Analysis
GenBank HTGS Finished:	GenBank HTGS Draft:
AL390241.19 NC_000001.9	AC023411.4 AC053473.3 AL391060.14

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	A/A	A/G	G/G	HWP	A	G
ss18144368	HapMap-CEU	European	120	IG	0.367	0.383	0.250	0.100	0.558	0.442

	HapMap-HCB	Asian	90	IG	0.889	0.089	0.022	0.100	0.933	0.067

	HapMap-JPT	Asian	88	IG	0.977	0.023		1.000	0.989	0.011

	HapMap-YRI	Sub-Saharan African	120	IG	0.400	0.383	0.217	0.150	0.592	0.408

ss24266764	AFD_EUR_PANEL	European	44	IG	0.182	0.591	0.227	0.403	0.477	0.523

	AFD_AFR_PANEL	African American	44	IG	0.409	0.409	0.182	0.527	0.614	0.386

	AFD_CHN_PANEL	Asian	48	IG	0.833	0.167		0.752	0.917	0.083

ss68778581	HapMap-CEU	European	118	GF		0.763	0.237		0.381	0.619

	HapMap-HCB	Asian	90	GF		0.956	0.044		0.478	0.522

	HapMap-JPT	Asian	90	GF		1.000			0.500	0.500

	HapMap-YRI	Sub-Saharan African	120	GF		0.800	0.200		0.400	0.600

Concordant Genotype	Total Sample	A/A	A/G	G/G
ss18144368	122	1	83	37
ss24266764	68	31	26	8
ss68778581	122		84	37

RefSNP Genotype Summary	Total Individual	A/A	A/G	G/G
rs11102807	332	32	105	44

Discordant Genotypes:
Indiviudal SampleID	SubSNP(ss)	Genotype	Population Handle	Submitter Population	Submitter SampleID	SampleID Alias	Submission Batch	NCBI ProbeID
150	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA10846	CEPH1334.01	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
150	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA10846	CEPH1334.01	chr1-HapMap-CEU
151	ss18144368	A/G	CSHL-HAPMAP	HapMap-CEU	NA10847	CEPH1334.02	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
151	ss68778581	G/G	CSHL-HAPMAP	HapMap-CEU	NA10847	CEPH1334.02	chr1-HapMap-CEU
157	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12144	CEPH1334.10	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
157	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12144	CEPH1334.10	chr1-HapMap-CEU
158	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12145	CEPH1334.11	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
158	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12145	CEPH1334.11	chr1-HapMap-CEU
160	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12239	CEPH1334.13	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
160	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12239	CEPH1334.13	chr1-HapMap-CEU
161	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA07029	CEPH1340.01	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
161	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA07029	CEPH1340.01	chr1-HapMap-CEU
169	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA06994	CEPH1340.09	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
169	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA06994	CEPH1340.09	chr1-HapMap-CEU
170	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA07000	CEPH1340.10	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
170	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA07000	CEPH1340.10	chr1-HapMap-CEU
174	ss18144368	G/G	CSHL-HAPMAP	HapMap-CEU	NA07048	CEPH1341.01	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
174	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA07048	CEPH1341.01	chr1-HapMap-CEU
186	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA06993	CEPH1341.13	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
186	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA06993	CEPH1341.13	chr1-HapMap-CEU
188	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA10851	CEPH1344.01	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
188	ss24266764	A/A	PERLEGEN	AFD_EUR_PANEL	NA10851		71_IND_CHR_1
188	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA10851	CEPH1344.01	chr1-HapMap-CEU
199	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12056	CEPH1344.12	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
199	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12056	CEPH1344.12	chr1-HapMap-CEU
200	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12057	CEPH1344.13	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
200	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12057	CEPH1344.13	chr1-HapMap-CEU
214	ss18144368	G/G	CSHL-HAPMAP	HapMap-CEU	NA07345	CEPH1345.13	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
214	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA07345	CEPH1345.13	chr1-HapMap-CEU
215	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA10857	CEPH1346.01	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
215	ss24266764	A/A	PERLEGEN	AFD_EUR_PANEL	NA10857		71_IND_CHR_1
215	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA10857	CEPH1346.01	chr1-HapMap-CEU
225	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12043	CEPH1346.11	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
225	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12043	CEPH1346.11	chr1-HapMap-CEU
226	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12044	CEPH1346.12	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
226	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12044	CEPH1346.12	chr1-HapMap-CEU
238	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA11881	CEPH1347.14	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
238	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA11881	CEPH1347.14	chr1-HapMap-CEU
254	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA10856	CEPH1350.01	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
254	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA10856	CEPH1350.01	chr1-HapMap-CEU
255	ss18144368	A/G	CSHL-HAPMAP	HapMap-CEU	NA10855	CEPH1350.02	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
255	ss68778581	G/G	CSHL-HAPMAP	HapMap-CEU	NA10855	CEPH1350.02	chr1-HapMap-CEU
264	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA11831	CEPH1350.12	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
264	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA11831	CEPH1350.12	chr1-HapMap-CEU
344	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12716	CEPH1358.11	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
344	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12716	CEPH1358.11	chr1-HapMap-CEU
361	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA11993	CEPH1362.14	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
361	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA11993	CEPH1362.14	chr1-HapMap-CEU
374	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12234	CEPH1375.12	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
374	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12234	CEPH1375.12	chr1-HapMap-CEU
399	ss18144368	G/G	CSHL-HAPMAP	HapMap-CEU	NA10830	CEPH1408.01	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
399	ss24266764	G/G	PERLEGEN	AFD_EUR_PANEL	NA10830		71_IND_CHR_1
399	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA10830	CEPH1408.01	chr1-HapMap-CEU
411	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12156	CEPH1408.13	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
411	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12156	CEPH1408.13	chr1-HapMap-CEU
457	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA10839	CEPH1420.02	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
457	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA10839	CEPH1420.02	chr1-HapMap-CEU
465	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12004	CEPH1420.10	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
465	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12004	CEPH1420.10	chr1-HapMap-CEU
536	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12751	CEPH1444.14	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
536	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12751	CEPH1444.14	chr1-HapMap-CEU
579	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12815	CEPH1454.15	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
579	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12815	CEPH1454.15	chr1-HapMap-CEU
620	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12874	CEPH1459.11	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
620	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12874	CEPH1459.11	chr1-HapMap-CEU
637	ss18144368	A/A	CSHL-HAPMAP	HapMap-CEU	NA12892	CEPH1463.16	r23_ch1_CEU_illumina:golden_gate_1.0.0	272734
637	ss68778581	A/G	CSHL-HAPMAP	HapMap-CEU	NA12892	CEPH1463.16	chr1-HapMap-CEU
5134	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19127	YOR077.02	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5134	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19127	YOR077.02	chr1-HapMap-YRI
5138	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19130	YOR101.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5138	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19130	YOR101.03	chr1-HapMap-YRI
5141	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19098	YOR105.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5141	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19098	YOR105.03	chr1-HapMap-YRI
5142	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19194	YOR112.01	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5142	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19194	YOR112.01	chr1-HapMap-YRI
5143	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19193	YOR112.02	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5143	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19193	YOR112.02	chr1-HapMap-YRI
5147	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19239	YOR117.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5147	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19239	YOR117.03	chr1-HapMap-YRI
5148	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18526	CH18526	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5148	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18526	CH18526	chr1-HapMap-HCB
5150	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18529	CH18529	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5150	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18529	CH18529	chr1-HapMap-HCB
5151	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18558	CH18558	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5151	ss68778581	G/G	CSHL-HAPMAP	HapMap-HCB	NA18558	CH18558	chr1-HapMap-HCB
5152	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18532	CH18532	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5152	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18532	CH18532	chr1-HapMap-HCB
5153	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18561	CH18561	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5153	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18561	CH18561	chr1-HapMap-HCB
5154	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18562	CH18562	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5154	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18562	CH18562	chr1-HapMap-HCB
5155	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18537	CH18537	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5155	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18537	CH18537	chr1-HapMap-HCB
5156	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18603	CH18603	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5156	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18603	CH18603	chr1-HapMap-HCB
5157	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18540	CH18540	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5157	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18540	CH18540	chr1-HapMap-HCB
5159	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18542	CH18542	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5159	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18542	CH18542	chr1-HapMap-HCB
5160	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18545	CH18545	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5160	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18545	CH18545	chr1-HapMap-HCB
5161	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18572	CH18572	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5161	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18572	CH18572	chr1-HapMap-HCB
5162	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18547	CH18547	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5162	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18547	CH18547	chr1-HapMap-HCB
5163	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18609	CH18609	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5163	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18609	CH18609	chr1-HapMap-HCB
5165	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18608	CH18608	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5165	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18608	CH18608	chr1-HapMap-HCB
5166	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18552	CH18552	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5166	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18552	CH18552	chr1-HapMap-HCB
5168	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18555	CH18555	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5168	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18555	CH18555	chr1-HapMap-HCB
5169	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18564	CH18564	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5169	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18564	CH18564	chr1-HapMap-HCB
5170	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18566	CH18566	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5170	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18566	CH18566	chr1-HapMap-HCB
5171	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18563	CH18563	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5171	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18563	CH18563	chr1-HapMap-HCB
5172	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18570	CH18570	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5172	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18570	CH18570	chr1-HapMap-HCB
5174	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18571	CH18571	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5174	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18571	CH18571	chr1-HapMap-HCB
5175	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18620	CH18620	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5175	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18620	CH18620	chr1-HapMap-HCB
5176	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18621	CH18621	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5176	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18621	CH18621	chr1-HapMap-HCB
5177	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18594	CH18594	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5177	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18594	CH18594	chr1-HapMap-HCB
5178	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18622	CH18622	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5178	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18622	CH18622	chr1-HapMap-HCB
5179	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18573	CH18573	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5179	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18573	CH18573	chr1-HapMap-HCB
5180	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18623	CH18623	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5180	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18623	CH18623	chr1-HapMap-HCB
5181	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18576	CH18576	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5181	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18576	CH18576	chr1-HapMap-HCB
5182	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18577	CH18577	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5182	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18577	CH18577	chr1-HapMap-HCB
5183	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18624	CH18624	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5183	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18624	CH18624	chr1-HapMap-HCB
5184	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18579	CH18579	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5184	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18579	CH18579	chr1-HapMap-HCB
5185	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18632	CH18632	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5185	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18632	CH18632	chr1-HapMap-HCB
5186	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18582	CH18582	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5186	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18582	CH18582	chr1-HapMap-HCB
5187	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18633	CH18633	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5187	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18633	CH18633	chr1-HapMap-HCB
5188	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18635	CH18635	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5188	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18635	CH18635	chr1-HapMap-HCB
5189	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18592	CH18592	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5189	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18592	CH18592	chr1-HapMap-HCB
5190	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18636	CH18636	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5190	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18636	CH18636	chr1-HapMap-HCB
5191	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18593	CH18593	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5191	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18593	CH18593	chr1-HapMap-HCB
5192	ss18144368	A/A	CSHL-HAPMAP	HapMap-HCB	NA18637	CH18637	r23_ch1_HCB_illumina:golden_gate_1.0.0	272734
5192	ss68778581	A/G	CSHL-HAPMAP	HapMap-HCB	NA18637	CH18637	chr1-HapMap-HCB
5194	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18940	JA18940	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5194	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18940	JA18940	chr1-HapMap-JPT
5195	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18951	JA18951	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5195	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18951	JA18951	chr1-HapMap-JPT
5196	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18943	JA18943	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5196	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18943	JA18943	chr1-HapMap-JPT
5197	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18947	JA18947	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5197	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18947	JA18947	chr1-HapMap-JPT
5198	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18944	JA18944	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5198	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18944	JA18944	chr1-HapMap-JPT
5199	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18945	JA18945	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5199	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18945	JA18945	chr1-HapMap-JPT
5200	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18949	JA18949	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5200	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18949	JA18949	chr1-HapMap-JPT
5201	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18948	JA18948	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5201	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18948	JA18948	chr1-HapMap-JPT
5202	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18952	JA18952	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5202	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18952	JA18952	chr1-HapMap-JPT
5203	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18956	JA18956	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5203	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18956	JA18956	chr1-HapMap-JPT
5204	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18964	JA18964	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5204	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18964	JA18964	chr1-HapMap-JPT
5205	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18953	JA18953	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5205	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18953	JA18953	chr1-HapMap-JPT
5206	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18968	JA18968	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5206	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18968	JA18968	chr1-HapMap-JPT
5207	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18959	JA18959	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5207	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18959	JA18959	chr1-HapMap-JPT
5208	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18969	JA18969	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5208	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18969	JA18969	chr1-HapMap-JPT
5209	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18960	JA18960	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5209	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18960	JA18960	chr1-HapMap-JPT
5210	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18961	JA18961	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5210	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18961	JA18961	chr1-HapMap-JPT
5211	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18972	JA18972	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5211	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18972	JA18972	chr1-HapMap-JPT
5212	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18965	JA18965	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5212	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18965	JA18965	chr1-HapMap-JPT
5213	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18973	JA18973	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5213	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18973	JA18973	chr1-HapMap-JPT
5214	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18966	JA18966	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5214	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18966	JA18966	chr1-HapMap-JPT
5215	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18975	JA18975	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5215	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18975	JA18975	chr1-HapMap-JPT
5216	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18967	JA18967	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5216	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18967	JA18967	chr1-HapMap-JPT
5217	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18976	JA18976	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5217	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18976	JA18976	chr1-HapMap-JPT
5218	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18978	JA18978	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5218	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18978	JA18978	chr1-HapMap-JPT
5219	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18970	JA18970	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5219	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18970	JA18970	chr1-HapMap-JPT
5220	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18980	JA18980	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5220	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18980	JA18980	chr1-HapMap-JPT
5221	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18995	JA18995	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5221	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18995	JA18995	chr1-HapMap-JPT
5222	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18981	JA18981	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5222	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18981	JA18981	chr1-HapMap-JPT
5223	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18971	JA18971	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5223	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18971	JA18971	chr1-HapMap-JPT
5224	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18974	JA18974	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5224	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18974	JA18974	chr1-HapMap-JPT
5225	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18987	JA18987	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5225	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18987	JA18987	chr1-HapMap-JPT
5226	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18990	JA18990	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5226	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18990	JA18990	chr1-HapMap-JPT
5227	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18991	JA18991	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5227	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18991	JA18991	chr1-HapMap-JPT
5228	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18994	JA18994	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5228	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18994	JA18994	chr1-HapMap-JPT
5229	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18992	JA18992	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5229	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18992	JA18992	chr1-HapMap-JPT
5230	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18997	JA18997	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5230	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18997	JA18997	chr1-HapMap-JPT
5231	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18998	JA18998	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5231	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18998	JA18998	chr1-HapMap-JPT
5232	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA19000	JA19000	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5232	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA19000	JA19000	chr1-HapMap-JPT
5233	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA19005	JA19005	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5233	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA19005	JA19005	chr1-HapMap-JPT
5234	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA18999	JA18999	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5234	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA18999	JA18999	chr1-HapMap-JPT
5235	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA19007	JA19007	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5235	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA19007	JA19007	chr1-HapMap-JPT
5236	ss18144368	A/A	CSHL-HAPMAP	HapMap-JPT	NA19003	JA19003	r23_ch1_JPT_illumina:golden_gate_1.0.0	272734
5236	ss68778581	A/G	CSHL-HAPMAP	HapMap-JPT	NA19003	JA19003	chr1-HapMap-JPT
5243	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA18507	YOR009.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5243	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA18507	YOR009.03	chr1-HapMap-YRI
5245	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA18858	YOR012.02	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5245	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA18858	YOR012.02	chr1-HapMap-YRI
5247	ss18144368	A/G	CSHL-HAPMAP	HapMap-YRI	NA18515	YOR013.01	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5247	ss68778581	G/G	CSHL-HAPMAP	HapMap-YRI	NA18515	YOR013.01	chr1-HapMap-YRI
5249	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA18516	YOR013.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5249	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA18516	YOR013.03	chr1-HapMap-YRI
5251	ss18144368	G/G	CSHL-HAPMAP	HapMap-YRI	NA18523	YOR016.02	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5251	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA18523	YOR016.02	chr1-HapMap-YRI
5252	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA18522	YOR016.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5252	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA18522	YOR016.03	chr1-HapMap-YRI
5255	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA18871	YOR017.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5255	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA18871	YOR017.03	chr1-HapMap-YRI
5256	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA18854	YOR018.01	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5256	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA18854	YOR018.01	chr1-HapMap-YRI
5257	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA18852	YOR018.02	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5257	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA18852	YOR018.02	chr1-HapMap-YRI
5258	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA18853	YOR018.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5258	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA18853	YOR018.03	chr1-HapMap-YRI
5261	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA18856	YOR023.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5261	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA18856	YOR023.03	chr1-HapMap-YRI
5263	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA18861	YOR024.02	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5263	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA18861	YOR024.02	chr1-HapMap-YRI
5265	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA18914	YOR028.01	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5265	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA18914	YOR028.01	chr1-HapMap-YRI
5267	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA18913	YOR028.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5267	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA18913	YOR028.03	chr1-HapMap-YRI
5270	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19092	YOR040.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5270	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19092	YOR040.03	chr1-HapMap-YRI
5277	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19202	YOR045.01	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5277	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19202	YOR045.01	chr1-HapMap-YRI
5278	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19201	YOR045.02	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5278	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19201	YOR045.02	chr1-HapMap-YRI
5279	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19200	YOR045.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5279	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19200	YOR045.03	chr1-HapMap-YRI
5283	ss18144368	A/G	CSHL-HAPMAP	HapMap-YRI	NA19205	YOR048.01	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5283	ss68778581	G/G	CSHL-HAPMAP	HapMap-YRI	NA19205	YOR048.01	chr1-HapMap-YRI
5289	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19208	YOR051.01	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5289	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19208	YOR051.01	chr1-HapMap-YRI
5290	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19206	YOR051.02	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5290	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19206	YOR051.02	chr1-HapMap-YRI
5291	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19207	YOR051.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5291	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19207	YOR051.03	chr1-HapMap-YRI
5297	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19223	YOR058.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5297	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19223	YOR058.03	chr1-HapMap-YRI
5299	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19116	YOR060.02	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5299	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19116	YOR060.02	chr1-HapMap-YRI
5303	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19141	YOR071.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5303	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19141	YOR071.03	chr1-HapMap-YRI
5304	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19154	YOR072.01	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5304	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19154	YOR072.01	chr1-HapMap-YRI
5306	ss18144368	A/A	CSHL-HAPMAP	HapMap-YRI	NA19153	YOR072.03	r23_ch1_YRI_illumina:golden_gate_1.0.0	272734
5306	ss68778581	A/G	CSHL-HAPMAP	HapMap-YRI	NA19153	YOR072.03	chr1-HapMap-YRI

Genotype data submitted for	341	samples from	332	individuals	Individual with multiple genotypes submission:	270

Validation Summary:

Validation status

Marker displays
Mendelian segregation

PCR results confirmed
in multiple reactions

Homozygotes detected
in individual genotype data

DoubleHit found by: BCM_SSAHASNP

UNKNOWN

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Revised: May 25, 2006 1:38 PM .