proteins
| 66 proteins |
I | COG0575 | CDP-diglyceride synthetase | Help | |
|---|---|---|---|---|---|
| 1 from | query genome Brucella melitensis (Rhizobiales | Alphaproteobacteria) | ||||
| BMEI0828 | ||||
177 letters (r) 0
0 798 _ ||| 1 BMEII0913 (177) COG4803 40
-13 424 _ ||| 3 SMa1672 (204) COG4803 0
149
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BMEII0913
(177 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
BMEII0913 311 4e-85
SMa1672 167 8e-42
mlr6724 167 1e-41
MA2627 150 1e-36
sll1106 149 4e-36
MA2442 138 6e-33
SMc01723 114 2e-25
AGc2272 97 1e-20
MA2644 95 1e-19
CPn0567 34 0.17
YJL194w 32 0.54
SPCC63.13 32 0.57
MA3559 32 0.83
MA2639 31 1.6
BMEI1959 31 1.7
NMA1128 30 2.1
BS_yqjG 30 2.8
ZyfcC 30 2.8
ECs3182 30 2.9
yfcC 30 2.9
NMB0932 30 3.0
VC0624 30 3.3
FN0023 30 3.4
MPN215 30 3.8
STM2339 30 3.9
Cgl1400 29 4.5
ECs3976 29 4.7
ZexuR 29 4.7
exuR 29 4.7
MA2640 29 5.6
SPCC576.08c 29 6.0
MK0051 29 6.1
BS_spoVAD 29 6.4
Cgl0451 28 7.4
MA3404 28 9.4
# >BMEII0913
# Length = 177
#
# Score = 311 bits (798), Expect = 4e-85
# Identities = 177/177 (100%), Positives = 177/177 (100%)
#
# Query: 1 MNDLVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVVKDSDGRVKLNQLVNSTAAGA 60
# MNDLVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVVKDSDGRVKLNQLVNSTAAGA
# Sbjct: 1 MNDLVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVVKDSDGRVKLNQLVNSTAAGA 60
#
# Query: 61 VSGALWGTLIGFIFFMPLVGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQPGSAGLFL 120
# VSGALWGTLIGFIFFMPLVGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQPGSAGLFL
# Sbjct: 61 VSGALWGTLIGFIFFMPLVGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQPGSAGLFL 120
#
# Query: 121 LIRKMTTDKVLADLKGIGGTVVRTSLDEKAENALRKAIAEHVVSSATQTAPTGTSGA 177
# LIRKMTTDKVLADLKGIGGTVVRTSLDEKAENALRKAIAEHVVSSATQTAPTGTSGA
# Sbjct: 121 LIRKMTTDKVLADLKGIGGTVVRTSLDEKAENALRKAIAEHVVSSATQTAPTGTSGA 177
#
#
# >SMa1672
# Length = 204
#
# Score = 167 bits (424), Expect = 8e-42
# Identities = 96/158 (60%), Positives = 123/158 (77%)
#
# Query: 1 MNDLVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVVKDSDGRVKLNQLVNSTAAGA 60
# M+ L+ I +P E KAEEVR+R++ELQ EYL+ LGDAV+ K G+VKLNQL+N TAAGA
# Sbjct: 41 MSSLIAIIYPSEDKAEEVRKRLIELQNEYLLTLGDAVIATKTDAGKVKLNQLMNLTAAGA 100
#
# Query: 61 VSGALWGTLIGFIFFMPLVGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQPGSAGLFL 120
# SG+ WG L+G +F PL+G ALGAA+GAIGG L+DVGI+DNFMK+ A LQPG+A LF+
# Sbjct: 101 ASGSFWGLLVGVLFLNPLIGVALGAASGAIGGALSDVGINDNFMKELARGLQPGNAALFV 160
#
# Query: 121 LIRKMTTDKVLADLKGIGGTVVRTSLDEKAENALRKAI 158
# L+++MT DKVL D+ GGT++RTSLDE E LR A+
# Sbjct: 161 LVKEMTEDKVLKDISPFGGTILRTSLDESKEQLLRDAL 198
#
#
# >mlr6724
# Length = 165
#
# Score = 167 bits (423), Expect = 1e-41
# Identities = 96/160 (60%), Positives = 124/160 (77%)
#
# Query: 1 MNDLVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVVKDSDGRVKLNQLVNSTAAGA 60
# M+DLV I +P E KAEEVRQR+ LQ+EYLI + DAV+ K G VKLNQ++N+T AGA
# Sbjct: 1 MSDLVVIVYPTEAKAEEVRQRLFALQKEYLINISDAVIATKTEAGNVKLNQIMNTTVAGA 60
#
# Query: 61 VSGALWGTLIGFIFFMPLVGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQPGSAGLFL 120
# VSG+ WG LIG IF P++G A+GAA+GA+GG LTDVGI+D FMKD ++ LQPG+A LF+
# Sbjct: 61 VSGSFWGLLIGVIFLNPVIGVAIGAASGALGGALTDVGINDAFMKDLSATLQPGNAALFV 120
#
# Query: 121 LIRKMTTDKVLADLKGIGGTVVRTSLDEKAENALRKAIAE 160
# LI MT DKVL+ +KG GG V++TSLDE E LR+A+++
# Sbjct: 121 LIHGMTADKVLSAIKGFGGVVLKTSLDETKEQILREALSQ 160
#
#
# >MA2627
# Length = 169
#
# Score = 150 bits (379), Expect = 1e-36
# Identities = 79/157 (50%), Positives = 108/157 (68%)
#
# Query: 1 MNDLVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVVKDSDGRVKLNQLVNSTAAGA 60
# M++L+ AF D++ A E+ + + +LQ+E LI L DA VVV++ DG+VK+ Q VN AG
# Sbjct: 8 MSELIVFAFSDDKGASEMDEAIKKLQKEQLITLDDAAVVVRNHDGKVKVKQAVNLVGAGT 67
#
# Query: 61 VSGALWGTLIGFIFFMPLVGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQPGSAGLFL 120
# V GA WG LIG +F+MP +G A+GA TGAI GKL+D GIDD+F+ + A ++PG + LFL
# Sbjct: 68 VGGAFWGMLIGLLFWMPWLGMAIGAITGAISGKLSDYGIDDDFIHEVAETIEPGGSALFL 127
#
# Query: 121 LIRKMTTDKVLADLKGIGGTVVRTSLDEKAENALRKA 157
# LI K T DKVL +L VVRTSL + E+ L+ A
# Sbjct: 128 LISKWTEDKVLEELSKYNPKVVRTSLSKDEESKLKAA 164
#
#
# >sll1106
# Length = 171
#
# Score = 149 bits (375), Expect = 4e-36
# Identities = 86/161 (53%), Positives = 119/161 (73%)
#
# Query: 1 MNDLVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVVKDSDGRVKLNQLVNSTAAGA 60
# M+DL+ I + DE KAEEVR + +LQ E+LIE+ DA VVVKD G+VKL Q +N T++GA
# Sbjct: 1 MSDLIVIGYDDEYKAEEVRLALAKLQVEHLIEMEDAAVVVKDEKGKVKLKQAINLTSSGA 60
#
# Query: 61 VSGALWGTLIGFIFFMPLVGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQPGSAGLFL 120
# VSG WG LIG +FF PL+G A+GAA+GA+ G L+D+G+DDNFM++ + PGS+ LF+
# Sbjct: 61 VSGGFWGLLIGILFFNPLLGAAVGAASGALAGALSDIGVDDNFMRELGETMCPGSSALFV 120
#
# Query: 121 LIRKMTTDKVLADLKGIGGTVVRTSLDEKAENALRKAIAEH 161
# L++K+T DKVLAD+ GG V+RTSL + E+ L+ + H
# Sbjct: 121 LVKKVTPDKVLADVSKYGGKVLRTSLSQDEESQLQAVLDRH 161
#
#
# >MA2442
# Length = 175
#
# Score = 138 bits (347), Expect = 6e-33
# Identities = 71/157 (45%), Positives = 100/157 (63%)
#
# Query: 1 MNDLVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVVKDSDGRVKLNQLVNSTAAGA 60
# M++L+ AFP+E A E+ + + +L++E LI L DA VV+ DG++K+ Q N AG
# Sbjct: 14 MSELIVFAFPNETGASEMDEAINQLKKEELIVLDDAATVVRKPDGKIKVKQATNLVGAGV 73
#
# Query: 61 VSGALWGTLIGFIFFMPLVGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQPGSAGLFL 120
# + GA WG LIG F+MP +G A+GA GAI KL D GI+D+F+K+ ++PG + LFL
# Sbjct: 74 LGGAFWGMLIGLFFWMPWLGLAVGAVAGAITSKLYDYGINDDFIKEVGETIKPGGSALFL 133
#
# Query: 121 LIRKMTTDKVLADLKGIGGTVVRTSLDEKAENALRKA 157
# LI K T DK L L T+VRTSL ++ E L+ A
# Sbjct: 134 LISKWTEDKALEKLNKFNATIVRTSLSKEDELKLKAA 170
#
#
# >SMc01723
# Length = 179
#
# Score = 114 bits (284), Expect = 2e-25
# Identities = 74/168 (44%), Positives = 112/168 (66%), Gaps = 8/168 (4%)
#
# Query: 1 MNDLVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVVKDSDGRVKLNQLVNSTAAGA 60
# M+DL+ + F +A++V ++ L++EYLI+L DAVVVV+D+DG+V L Q +N T GA
# Sbjct: 1 MSDLIVVGFDSTDEADKVLLKLNSLRKEYLIDLEDAVVVVRDADGKVHLKQSMNLTTVGA 60
#
# Query: 61 ----VSGALWGTLIGFIFFMPL----VGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQ 112
# +SG+LWG L+G +F PL +G A+GA GA+ G L D GIDD+F+K + +
# Sbjct: 61 TSGLLSGSLWGGLVGLLFLNPLAGFALGGAIGAGAGALSGSLVDYGIDDDFIKSLGNTIP 120
#
# Query: 113 PGSAGLFLLIRKMTTDKVLADLKGIGGTVVRTSLDEKAENALRKAIAE 160
# S+ LF+L+RK+ +KVLA+ G+ G V++TSL + E L+ AI+E
# Sbjct: 121 NNSSALFVLVRKVQPEKVLAEFSGLRGRVLKTSLSPEQEQKLQAAISE 168
#
#
# >AGc2272
# Length = 207
#
# Score = 97.4 bits (241), Expect = 1e-20
# Identities = 76/167 (45%), Positives = 112/167 (66%), Gaps = 8/167 (4%)
#
# Query: 1 MNDLVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVVKDSDGRVKLNQLVNSTAAGA 60
# M++LV + F ++A+ V ++ L++EYL++L DAVVVV+D +G+V L Q VN TA GA
# Sbjct: 30 MSELVVVGFDGTEEADRVLLKLAGLKKEYLVDLEDAVVVVRDENGKVHLKQSVNLTAIGA 89
#
# Query: 61 VSGALWGTLIGFIFFM----PL----VGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQ 112
# SG L G L G + + PL +G A+GA TGA+ G LTD GIDD+F+K +
# Sbjct: 90 SSGFLSGGLWGGLVGLLFLNPLAGFAIGGAIGAGTGALAGSLTDFGIDDDFIKSLGETIP 149
#
# Query: 113 PGSAGLFLLIRKMTTDKVLADLKGIGGTVVRTSLDEKAENALRKAIA 159
# GS+ LF+LIRK+ +KVLA+L+G+ G V++TSL + E L+KA++
# Sbjct: 150 NGSSALFVLIRKVQPEKVLAELEGLRGRVIKTSLSPEQEAQLQKALS 196
#
#
# >MA2644
# Length = 171
#
# Score = 94.7 bits (234), Expect = 1e-19
# Identities = 58/166 (34%), Positives = 87/166 (51%), Gaps = 1/166 (0%)
#
# Query: 4 LVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVV-KDSDGRVKLNQLVNSTAAGAVS 62
# L + F AE + V L ++ LI L DA +V + K QL + T GA+S
# Sbjct: 6 LTVLKFDTPGGAEHALEVVENLSKQELITLQDAAIVSWPMGKKKPKTKQLTSMTGVGALS 65
#
# Query: 63 GALWGTLIGFIFFMPLVGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQPGSAGLFLLI 122
# GA WG L G IF +P+ G +GAA GA+ DVGI D+F+K S + G++ LFLL
# Sbjct: 66 GAFWGMLFGLIFLVPIFGMVVGAAIGALSASFADVGISDDFIKSVRSKVTEGTSALFLLT 125
#
# Query: 123 RKMTTDKVLADLKGIGGTVVRTSLDEKAENALRKAIAEHVVSSATQ 168
# DKV +G+ ++ ++L ++ E+ LR+ AE + +Q
# Sbjct: 126 SDAVQDKVFEAARGMKFELIASNLSKEEEDKLREVFAEEEAAVPSQ 171
#
#
# >CPn0567
# Length = 308
#
# Score = 33.9 bits (76), Expect = 0.17
# Identities = 26/66 (39%), Positives = 31/66 (46%), Gaps = 14/66 (21%)
#
# Query: 54 NSTAAGAVSGALWGTLIGFIFF------------MPLVGTALGAATGAIGGKLTDVGIDD 101
# N T G V+G L TLI FIFF MP + LG A G I G D+ I+
# Sbjct: 203 NKTVVGFVAGCLGATLISFIFFLQIPTRFASYFPMPAILIPLGLALG-ITGFFGDI-IES 260
#
# Query: 102 NFMKDA 107
# F +DA
# Sbjct: 261 IFKRDA 266
#
#
# >YJL194w
# Length = 513
#
# Score = 32.3 bits (72), Expect = 0.54
# Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
#
# Query: 111 LQPGSAGLFLLIRK-MTTDKVLADLKGIGGTV-VRTSLDEKAENALRKAIAEHVVSSATQ 168
# LQ GS +FL + + L +L G + RT+ E+ N L KAI+EH S
# Sbjct: 47 LQFGSQSIFLRTKALLQKSSELVNLNSSDGALPARTAEYEQVMNFLAKAISEHRSDSLYI 106
#
# Query: 169 TAPTGT 174
# T P GT
# Sbjct: 107 TGPPGT 112
#
#
# >SPCC63.13
# Length = 208
#
# Score = 32.3 bits (72), Expect = 0.57
# Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 13/78 (16%)
#
# Query: 42 DSDGRVKLNQLVNSTAAGAVSGALW-------GTLIGFIFFMPLVGTALGAATGAIGGKL 94
# DS N+++N T+ ++ A W G +GFI F + G +G+A GA G+
# Sbjct: 109 DSQFEQVFNEMMNETSTRGIANAFWTIVGTLAGAALGFITF-DVPGVLVGSAAGAKLGR- 166
#
# Query: 95 TDVGIDDNFMKDAASVLQ 112
# I D K A SV Q
# Sbjct: 167 ----IRDTHGKSAYSVFQ 180
#
#
# >MA3559
# Length = 454
#
# Score = 31.6 bits (70), Expect = 0.83
# Identities = 12/24 (50%), Positives = 18/24 (75%)
#
# Query: 5 VFIAFPDEQKAEEVRQRVLELQRE 28
# VFI+FP+E EE+ +R +E+ RE
# Sbjct: 74 VFISFPEETSREELERRGMEIARE 97
#
#
# >MA2639
# Length = 205
#
# Score = 30.8 bits (68), Expect = 1.6
# Identities = 29/142 (20%), Positives = 61/142 (42%), Gaps = 6/142 (4%)
#
# Query: 4 LVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVVKDSDGRVKLNQLVNSTAAGAVSG 63
# ++ IAF D + ++R+ + + + +I L D + V KD+DG V + +T
# Sbjct: 30 MLVIAFEDPKFHGQIRRELESVMEKGIIRLIDLLFVWKDNDGNVT---SLEATQLDEKER 86
#
# Query: 64 ALWGTLI---GFIFFMPLVGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQPGSAGLFL 120
# +G ++ + G +G GA+ + GI + + + + G+A L
# Sbjct: 87 MRFGAVVGGLLGFGAGGVEGAKIGMEEGALAAAQENYGITEEDILEVTDAIPEGTAAAIL 146
#
# Query: 121 LIRKMTTDKVLADLKGIGGTVV 142
# +I + ++ L+ G +V
# Sbjct: 147 IIEHLWAKQLKQSLQDSRGVLV 168
#
#
# >BMEI1959
# Length = 110
#
# Score = 30.8 bits (68), Expect = 1.7
# Identities = 22/60 (36%), Positives = 35/60 (57%), Gaps = 6/60 (10%)
#
# Query: 92 GKLTDVGIDDNFMKDAASVLQPGSAGLFLLIRKMTTDKVLADLKGIGGTVVRTSLDEKAE 151
# G++TDV + +F+ AAS L+PG L + R++ + LKG+ TV +L E+AE
# Sbjct: 48 GRVTDVSLGQSFIAAAASRLKPGGRLLMVANRQLPYE---LTLKGLFKTV---TLLEEAE 101
#
#
# >NMA1128
# Length = 162
#
# Score = 30.4 bits (67), Expect = 2.1
# Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 14/69 (20%)
#
# Query: 56 TAAG--AVSGALWGTLIGFIFFMPLVGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQP 113
# T AG AV GAL G++IG F +P G LG GA G+L + ++LQ
# Sbjct: 77 TGAGKLAVRGALAGSIIGIFFSLP--GLILGPFIGAAAGELI----------ERRNMLQA 124
#
# Query: 114 GSAGLFLLI 122
# G AGL L+
# Sbjct: 125 GKAGLGTLL 133
#
#
# >BS_yqjG
# Length = 275
#
# Score = 30.0 bits (66), Expect = 2.8
# Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
#
# Query: 70 IGFIFFMPLVGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQPGSAGLF 119
# +G + G A AAT +GG L++VG +++ + S L G AGLF
# Sbjct: 11 MGIFLIVLCSGNAAFAATNQVGG-LSNVGFFHDYLIEPFSALLKGVAGLF 59
#
#
# >ZyfcC
# Length = 513
#
# Score = 30.0 bits (66), Expect = 2.8
# Identities = 14/33 (42%), Positives = 20/33 (60%)
#
# Query: 52 LVNSTAAGAVSGALWGTLIGFIFFMPLVGTALG 84
# L+N G SG+ +GT +G I FM ++G A G
# Sbjct: 99 LMNFPFEGLTSGSKYGTAVGIIMFMLVIGGAFG 131
#
#
# >ECs3182
# Length = 513
#
# Score = 30.0 bits (66), Expect = 2.9
# Identities = 14/33 (42%), Positives = 20/33 (60%)
#
# Query: 52 LVNSTAAGAVSGALWGTLIGFIFFMPLVGTALG 84
# L+N G SG+ +GT +G I FM ++G A G
# Sbjct: 99 LMNFPFEGLTSGSKYGTAVGIIMFMLVIGGAFG 131
#
#
# >yfcC
# Length = 513
#
# Score = 30.0 bits (66), Expect = 2.9
# Identities = 14/33 (42%), Positives = 20/33 (60%)
#
# Query: 52 LVNSTAAGAVSGALWGTLIGFIFFMPLVGTALG 84
# L+N G SG+ +GT +G I FM ++G A G
# Sbjct: 99 LMNFPFEGLTSGSKYGTAVGIIMFMLVIGGAFG 131
#
#
# >NMB0932
# Length = 162
#
# Score = 30.0 bits (66), Expect = 3.0
# Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 14/69 (20%)
#
# Query: 56 TAAG--AVSGALWGTLIGFIFFMPLVGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQP 113
# T AG AV GAL G++IG F +P G LG GA G+L + ++LQ
# Sbjct: 77 TGAGKLAVRGALAGSIIGIFFSLP--GLILGPFIGAAAGELI----------ERRNMLQA 124
#
# Query: 114 GSAGLFLLI 122
# G AGL L+
# Sbjct: 125 GKAGLGTLL 133
#
#
# >VC0624
# Length = 361
#
# Score = 29.6 bits (65), Expect = 3.3
# Identities = 24/87 (27%), Positives = 35/87 (39%), Gaps = 7/87 (8%)
#
# Query: 4 LVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVVKDSDGRVKLNQLVNSTAAGAVS- 62
# ++F D K + +L L R L + V S + AG +
# Sbjct: 176 VLFFLLRDHDKIISAIRHILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGM 235
#
# Query: 63 ------GALWGTLIGFIFFMPLVGTAL 83
# G WGT++GF F+P+VGTAL
# Sbjct: 236 WLAGFPGLFWGTMMGFASFIPVVGTAL 262
#
#
# >FN0023
# Length = 499
#
# Score = 29.6 bits (65), Expect = 3.4
# Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
#
# Query: 52 LVNSTAAGAVSGALWGTLIGFIFFMPLVGTALGA--ATGAI 90
# + N G SG WGT +G + F+ +VG A G TGA+
# Sbjct: 83 VTNYVFEGLASGDKWGTAVGIVAFLLVVGGAFGIILKTGAV 123
#
#
# >MPN215
# Length = 389
#
# Score = 29.6 bits (65), Expect = 3.8
# Identities = 18/51 (35%), Positives = 24/51 (46%), Gaps = 1/51 (1%)
#
# Query: 50 NQLVNSTAAGAVSGALWGTLIGFIFFMPLVGTALGAATGAIGGKLTDVGID 100
# NQ ++ G V L+ LI F F L+G G +G GKL D I+
# Sbjct: 68 NQTIDQIVFGRVPNTLYVVLISF-FIGSLLGIIFGMISGLFRGKLIDAVIN 117
#
#
# >STM2339
# Length = 506
#
# Score = 29.6 bits (65), Expect = 3.9
# Identities = 14/33 (42%), Positives = 20/33 (60%)
#
# Query: 52 LVNSTAAGAVSGALWGTLIGFIFFMPLVGTALG 84
# L+N G SG+ +GT +G I FM ++G A G
# Sbjct: 92 LMNFPFEGLTSGSKFGTAVGIIMFMLVIGGAFG 124
#
#
# >Cgl1400
# Length = 268
#
# Score = 29.3 bits (64), Expect = 4.5
# Identities = 14/36 (38%), Positives = 21/36 (57%), Gaps = 1/36 (2%)
#
# Query: 67 GTLIGFIFFMPLVG-TALGAATGAIGGKLTDVGIDD 101
# G LIGF+ MP +G ALG A+ G + + +D+
# Sbjct: 200 GALIGFLLLMPFIGPEALGLCFAAVAGVMVFISVDE 235
#
#
# >ECs3976
# Length = 263
#
# Score = 29.3 bits (64), Expect = 4.7
# Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
#
# Query: 107 AASVLQPGSAGLFLLIRKMTTDKVLADLKGIGGTVVRTS---LDEKAENALRKAIAEHVV 163
# AA + + G++L+ K+ ++ +AD K + TVVR + L+ + +RK HVV
# Sbjct: 19 AADLKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEVRKGSGIHVV 78
#
# Query: 164 SS 165
# S+
# Sbjct: 79 SN 80
#
#
# >ZexuR
# Length = 263
#
# Score = 29.3 bits (64), Expect = 4.7
# Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
#
# Query: 107 AASVLQPGSAGLFLLIRKMTTDKVLADLKGIGGTVVRTS---LDEKAENALRKAIAEHVV 163
# AA + + G++L+ K+ ++ +AD K + TVVR + L+ + +RK HVV
# Sbjct: 19 AADLKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEVRKGSGIHVV 78
#
# Query: 164 SS 165
# S+
# Sbjct: 79 SN 80
#
#
# >exuR
# Length = 263
#
# Score = 29.3 bits (64), Expect = 4.7
# Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
#
# Query: 107 AASVLQPGSAGLFLLIRKMTTDKVLADLKGIGGTVVRTS---LDEKAENALRKAIAEHVV 163
# AA + + G++L+ K+ ++ +AD K + TVVR + L+ + +RK HVV
# Sbjct: 19 AADLKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEVRKGSGIHVV 78
#
# Query: 164 SS 165
# S+
# Sbjct: 79 SN 80
#
#
# >MA2640
# Length = 178
#
# Score = 28.9 bits (63), Expect = 5.6
# Identities = 25/139 (17%), Positives = 56/139 (39%)
#
# Query: 4 LVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVVKDSDGRVKLNQLVNSTAAGAVSG 63
# L+ I F + ++R+ + + + +I L D + V KD +G ++ + +
# Sbjct: 3 LLVIVFDNPDFHGQIRRELGSIMEKGIIRLIDLLFVWKDENGSIRYMEASQLDEKERMRF 62
#
# Query: 64 ALWGTLIGFIFFMPLVGTALGAATGAIGGKLTDVGIDDNFMKDAASVLQPGSAGLFLLIR 123
# + + G +G GA+ + GI + + + + G+A L+I
# Sbjct: 63 GAVVGGLLGFGAGGVEGAKIGMEEGALAAAQENYGITEEDILEVTDAIPEGTAAAVLIIE 122
#
# Query: 124 KMTTDKVLADLKGIGGTVV 142
# + ++ +K GG +V
# Sbjct: 123 HLWAKQLKQAIKDAGGVLV 141
#
#
# >SPCC576.08c
# Length = 253
#
# Score = 28.9 bits (63), Expect = 6.0
# Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
#
# Query: 36 AVVVVKDSDGRVKLNQLVNSTAAGAVSGALWGTLIGFIFFMPLV----GTALG 84
# A VV+ DSDG V L A A+ GA+ ++G + MP+ GTALG
# Sbjct: 99 AFVVIGDSDGHVGLGIKCAKEVATAIRGAI---IMGKLSIMPIRRGYWGTALG 148
#
#
# >MK0051
# Length = 305
#
# Score = 28.9 bits (63), Expect = 6.1
# Identities = 22/86 (25%), Positives = 39/86 (44%), Gaps = 11/86 (12%)
#
# Query: 94 LTDVGIDDNF---MKDAASVLQPGSAGLFLLIRKMTTDKVLADLKGIGGTVVRTSLDEKA 150
# L DVG+D + + D L P AGL + R+ +L+ G VVR+ + E+A
# Sbjct: 7 LRDVGVDPRYVAILDDTVVALNPRRAGLTVSRRE--------ELRREGIKVVRSKVVERA 58
#
# Query: 151 ENALRKAIAEHVVSSATQTAPTGTSG 176
# + + + ++ + + G SG
# Sbjct: 59 SSRFHQVVTDYDLFEPREEVVVGFSG 84
#
#
# >BS_spoVAD
# Length = 338
#
# Score = 28.9 bits (63), Expect = 6.4
# Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
#
# Query: 87 TGAIGGKLTDVGIDDNFMKDAASVLQPGSAGL----FLLIRKMTTDKVL---ADLKGIGG 139
# T A GK++D+GI D F D S + P +A F + + D L DL G+G
# Sbjct: 183 TSATVGKVSDLGITDPF--DMGSAMAPAAADTIKQHFKDLNRTADDYDLILTGDLSGVGS 240
#
# Query: 140 TVVRTSLDE 148
# +V+ L E
# Sbjct: 241 PIVKDILKE 249
#
#
# >Cgl0451
# Length = 250
#
# Score = 28.5 bits (62), Expect = 7.4
# Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
#
# Query: 100 DDNFMKDAASVLQPGSAGLFLLIRKMTTDKVLADLKGIGGTVVRTSL 146
# D ++KDA +VL PG G+ I T+D+ + DL G VR +L
# Sbjct: 57 DQGYLKDALAVLGPGYVGV-TQIPADTSDQEILDLDKAGVKAVRLNL 102
#
#
# >MA3404
# Length = 254
#
# Score = 28.1 bits (61), Expect = 9.4
# Identities = 12/46 (26%), Positives = 26/46 (56%)
#
# Query: 3 DLVFIAFPDEQKAEEVRQRVLELQREYLIELGDAVVVVKDSDGRVK 48
# +++ FPDE + EV + ++ L++ ++I + +V KD + K
# Sbjct: 20 EVIDARFPDETRNNEVEKEIIRLKKPFIIVINKCDLVSKDKLEKTK 65
#
#
Database: myva
Posted date: Sep 16, 2002 2:25 PM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.317 0.135 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,128,534
Number of Sequences: 192987
Number of extensions: 765218
Number of successful extensions: 3677
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 3617
Number of HSP's gapped (non-prelim): 95
length of query: 177
length of database: 59,019,183
effective HSP length: 102
effective length of query: 75
effective length of database: 39,334,509
effective search space: 2950088175
effective search space used: 2950088175
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
S2: 62 (28.5 bits)